Rmu_co8263959.1_g000001

Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8263959.1
Physical Location & Seq
Reverse (-)
2 .. 722
721 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8263959.1_g000001.1.cds

Sequence Viewer

Length: 406 bp
atgctttttaaggatacttgcaataagaaaagcaatcagcaaaatctgggaaccataaaatgctcaaacttgtgtactgagatagttgagtacactagtccaacagaaactgctgtatgcaacctggcatcaattgctctaccaagatttgtcagggagaaggctgttcctttcgagtcacatccatctaagcttgctggaagcaaaggttccaaaaatcgttactttgactttgacaaactagcagaggtcactgcaattgtcactgtaaacctcaacaagataattgatgttaactactaccctgttgagagtgcaaagacgtctaatttacgacataggccaattgggattggggttcagggtcttgctgataccttcatcttgcttggcatgtcctttgatt

Protein Analysis

135

Amino Acids

14.92

Weight (kDa)

8.69

Isoelectric Point (pI)

34.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 326
AcyI GRCGYC 1 cut(s) 323
AfaI GTAC 2 cut(s) 76, 92
AhlI ACTAGT 1 cut(s) 95
AjnI CCWGG 1 cut(s) 123
AluBI AGCT 1 cut(s) 193
AluI AGCT 1 cut(s) 193
AlwNI CAGNNNCTG 1 cut(s) 110
AoxI GGCC 1 cut(s) 341
BccI CCATC 1 cut(s) 193
BciT130I CCWGG 1 cut(s) 125
BciVI GTATCC 1 cut(s) 7
BcuI ACTAGT 1 cut(s) 95
BfaI CTAG 2 cut(s) 96, 242
BfuI GTATCC 1 cut(s) 7
Bme1390I CCNGG 1 cut(s) 125
BmiI GGNNCC 2 cut(s) 52, 211
BmrFI CCNGG 1 cut(s) 125
BmsI GCATC 1 cut(s) 137
BsaHI GRCGYC 1 cut(s) 323
BseBI CCWGG 1 cut(s) 125
BseGI GGATG 1 cut(s) 181
BseMII CTCAG 1 cut(s) 69
BshFI GGCC 1 cut(s) 343
BsnI GGCC 1 cut(s) 343
BspANI GGCC 1 cut(s) 343
BspCNI CTCAG 1 cut(s) 70
BspLI GGNNCC 2 cut(s) 52, 211
BssNI GRCGYC 1 cut(s) 323
Bst2UI CCWGG 1 cut(s) 125
Bst4CI ACNGT 1 cut(s) 268
BstACI GRCGYC 1 cut(s) 323
BstAPI GCANNNNNTGC 1 cut(s) 134
BstC8I GCNNGC 1 cut(s) 195
BstDEI CTNAG 2 cut(s) 78, 189
BstF5I GGATG 1 cut(s) 181
BstMWI GCNNNNNNNGC 1 cut(s) 134
BstNI CCWGG 1 cut(s) 125
BstNSI RCATGY 1 cut(s) 397
BstSCI CCNGG 1 cut(s) 123
BsuI GTATCC 1 cut(s) 7
BsuRI GGCC 1 cut(s) 343
BtsCI GGATG 1 cut(s) 181
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 2 cut(s) 252, 264
Cac8I GCNNGC 1 cut(s) 195
CaiI CAGNNNCTG 1 cut(s) 110
Csp6I GTAC 2 cut(s) 75, 91
CviAII CATG 1 cut(s) 394
CviJI RGCY 3 cut(s) 164, 193, 343
CviKI_1 RGCY 3 cut(s) 164, 193, 343
CviQI GTAC 2 cut(s) 75, 91
DdeI CTNAG 2 cut(s) 78, 189
EcoRII CCWGG 1 cut(s) 123
FaeI CATG 1 cut(s) 397
FaiI YATR 4 cut(s) 56, 118, 339, 395
FatI CATG 1 cut(s) 393
FokI GGATG 1 cut(s) 168
FspBI CTAG 2 cut(s) 96, 242
HaeIII GGCC 1 cut(s) 343
Hin1I GRCGYC 1 cut(s) 323
Hin1II CATG 1 cut(s) 397
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HindIII AAGCTT 1 cut(s) 191
HinfI GANTC 1 cut(s) 176
HpaI GTTAAC 1 cut(s) 295
Hpy166II GTNNAC 4 cut(s) 75, 93, 271, 295
Hpy8I GTNNAC 4 cut(s) 75, 93, 271, 295
HpyAV CCTTC 2 cut(s) 154, 388
HpyCH4III ACNGT 1 cut(s) 268
HpyCH4IV ACGT 1 cut(s) 323
HpyCH4V TGCA 4 cut(s) 21, 120, 257, 317
HpyF10VI GCNNNNNNNGC 1 cut(s) 134
HpyF3I CTNAG 2 cut(s) 78, 189
HpySE526I ACGT 1 cut(s) 323
Hsp92I GRCGYC 1 cut(s) 323
Hsp92II CATG 1 cut(s) 397
KspAI GTTAAC 1 cut(s) 295
LpnPI CCDG 7 cut(s) 32, 110, 137, 139, 183, 318, 347
LweI GCATC 1 cut(s) 137
MaeI CTAG 2 cut(s) 96, 242
MaeII ACGT 1 cut(s) 323
MaeIII GTNAC 4 cut(s) 177, 221, 250, 262
MfeI CAATTG 3 cut(s) 132, 258, 345
MluCI AATT 5 cut(s) 132, 258, 285, 328, 345
MlyI GAGTC 1 cut(s) 185
MmeI TCCRAC 1 cut(s) 125
MnlI CCTC 2 cut(s) 241, 284
MseI TTAA 2 cut(s) 9, 294
MspR9I CCNGG 1 cut(s) 125
MunI CAATTG 3 cut(s) 132, 258, 345
MvaI CCWGG 1 cut(s) 125
MwoI GCNNNNNNNGC 1 cut(s) 134
NlaIII CATG 1 cut(s) 397
NlaIV GGNNCC 2 cut(s) 52, 211
NmuCI GTSAC 3 cut(s) 177, 250, 262
NspI RCATGY 1 cut(s) 397
PleI GAGTC 1 cut(s) 184
PpsI GAGTC 1 cut(s) 184
Psp6I CCWGG 1 cut(s) 123
PspGI CCWGG 1 cut(s) 123
PspN4I GGNNCC 2 cut(s) 52, 211
PstNI CAGNNNCTG 1 cut(s) 110
RsaI GTAC 2 cut(s) 76, 92
RsaNI GTAC 2 cut(s) 75, 91
SaqAI TTAA 2 cut(s) 9, 294
SchI GAGTC 1 cut(s) 185
ScrFI CCNGG 1 cut(s) 125
SetI ASST 7 cut(s) 126, 195, 211, 252, 276, 326, 380
SfaNI GCATC 1 cut(s) 137
SpeI ACTAGT 1 cut(s) 95
Sse9I AATT 5 cut(s) 132, 258, 285, 328, 345
SspMI CTAG 2 cut(s) 96, 242
StyD4I CCNGG 1 cut(s) 123
TaaI ACNGT 1 cut(s) 268
TaiI ACGT 1 cut(s) 326
TaqI TCGA 1 cut(s) 174
TasI AATT 5 cut(s) 132, 258, 285, 328, 345
TatI WGTACW 2 cut(s) 74, 90
Tru1I TTAA 2 cut(s) 9, 294
Tru9I TTAA 2 cut(s) 9, 294
TscAI CASTG 2 cut(s) 259, 271
TseFI GTSAC 3 cut(s) 177, 250, 262
Tsp45I GTSAC 3 cut(s) 177, 250, 262
TspDTI ATGAA 1 cut(s) 370
TspRI CASTG 2 cut(s) 259, 271
XceI RCATGY 1 cut(s) 397
XspI CTAG 2 cut(s) 96, 242
ZraI GACGTC 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.