Rh2CG021300

Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
1688526 .. 1697935
9410 bp
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UTR
Exon/CDS
Intron
Rh2CG021300.1

Sequence Viewer

Length: 522 bp
ATGAAACATACCAGGGTTGTCCAGTTAGCAAGGGAATCCTTCAGCCAGACATGTGGGATTCGCAGGGTTCTGAGCGGTGAATTTGTTGTGGTGAATAAACATCTTCTTCATGACTTGATTGAGATGGGTCTTTGGTCTCCGGCTATTAAGAATAAGATAATCCATGAGGATGGCTCTGTTCAGAAAATCCCACAAATCCCTGATGATCTGAAAGCCATTTACAGAACTGTGTGGGAGATCAAGCAAAGAACATTGGTTGACATGGCTGTTGATAGGGGATGTTACATAGATCAAAGTCAAAGTGGTGAGTGGATTAGTGGTTTCATGGTGAACATTGGGACAGGTGAGTCATCATATCCAGATGAGACAGACTATCTCCGTACAGGGCTTTACAGATGGGCAGGTGATGGATATGCCTTTGATAAGAAGGGAAATGGAGACTACATAGAGGTGGTGAACACTCCAAACAACCCAGATGGTACTAATCGGAAAGCCATGCATGGTGGAAAACAGACCAGATGA

Protein Analysis

173

Amino Acids

19.59

Weight (kDa)

6.96

Isoelectric Point (pI)

37.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribonuc_red_lgC PF02867 17 - 101 1.3e-21 Ribonucleotide reductase, barrel domain
Alliinase_C PF04864 117 - 169 2.6e-11 Allinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 392
AasI GACNNNNNNGTC 1 cut(s) 346
Acc36I ACCTGC 1 cut(s) 392
AccBSI CCGCTC 1 cut(s) 75
AciI CCGC 1 cut(s) 75
AcsI RAATTY 1 cut(s) 80
AcuI CTGAAG 1 cut(s) 25
AfaI GTAC 2 cut(s) 382, 481
AflIII ACRYGT 1 cut(s) 50
AjnI CCWGG 1 cut(s) 11
Alw26I GTCTC 3 cut(s) 141, 359, 432
ApoI RAATTY 1 cut(s) 80
AsuHPI GGTGA 7 cut(s) 89, 103, 317, 340, 356, 416, 466
BccI CCATC 5 cut(s) 118, 164, 390, 401, 470
BciT130I CCWGG 1 cut(s) 13
BcoDI GTCTC 3 cut(s) 141, 359, 432
BfuAI ACCTGC 1 cut(s) 392
Bme1390I CCNGG 1 cut(s) 13
BmrFI CCNGG 1 cut(s) 13
BplI GAGNNNNNCTC 2 cut(s) 158, 190
BsaI GGTCTC 1 cut(s) 141
BsaJI CCNNGG 1 cut(s) 12
Bse1I ACTGG 1 cut(s) 22
BseBI CCWGG 1 cut(s) 13
BseDI CCNNGG 1 cut(s) 12
BseGI GGATG 2 cut(s) 175, 284
BseMII CTCAG 1 cut(s) 62
BseNI ACTGG 1 cut(s) 22
BsiSI CCGG 1 cut(s) 140
BslFI GGGAC 1 cut(s) 352
BsmAI GTCTC 3 cut(s) 141, 359, 432
BsmFI GGGAC 1 cut(s) 352
Bso31I GGTCTC 1 cut(s) 141
Bsp143I GATC 3 cut(s) 205, 237, 289
BspACI CCGC 1 cut(s) 75
BspCNI CTCAG 1 cut(s) 63
BspHI TCATGA 1 cut(s) 109
BspMI ACCTGC 1 cut(s) 392
BspTNI GGTCTC 1 cut(s) 141
BsrBI CCGCTC 1 cut(s) 75
BsrI ACTGG 1 cut(s) 22
BssECI CCNNGG 1 cut(s) 12
BssMI GATC 3 cut(s) 205, 237, 289
Bst2UI CCWGG 1 cut(s) 13
Bst4CI ACNGT 1 cut(s) 229
BstDEI CTNAG 1 cut(s) 71
BstF5I GGATG 2 cut(s) 175, 284
BstKTI GATC 3 cut(s) 208, 240, 292
BstMAI GTCTC 3 cut(s) 141, 359, 432
BstMBI GATC 3 cut(s) 205, 237, 289
BstNI CCWGG 1 cut(s) 13
BstNSI RCATGY 1 cut(s) 54
BstSCI CCNGG 1 cut(s) 11
BstXI CCANNNNNNTGG 2 cut(s) 53, 170
BtsCI GGATG 2 cut(s) 175, 284
BveI ACCTGC 1 cut(s) 392
CciI TCATGA 1 cut(s) 109
Csp6I GTAC 2 cut(s) 381, 480
CviAII CATG 7 cut(s) 51, 110, 164, 262, 325, 496, 500
CviJI RGCY 7 cut(s) 45, 143, 174, 215, 266, 388, 494
CviKI_1 RGCY 7 cut(s) 45, 143, 174, 215, 266, 388, 494
CviQI GTAC 2 cut(s) 381, 480
DdeI CTNAG 1 cut(s) 71
DpnI GATC 3 cut(s) 207, 239, 291
DpnII GATC 3 cut(s) 205, 237, 289
DrdI GACNNNNNNGTC 1 cut(s) 346
DseDI GACNNNNNNGTC 1 cut(s) 346
Eco31I GGTCTC 1 cut(s) 141
Eco57I CTGAAG 1 cut(s) 25
EcoRII CCWGG 1 cut(s) 11
EcoT22I ATGCAT 1 cut(s) 501
FaeI CATG 7 cut(s) 54, 113, 167, 265, 328, 499, 503
FaqI GGGAC 1 cut(s) 352
FatI CATG 7 cut(s) 50, 109, 163, 261, 324, 495, 499
FokI GGATG 2 cut(s) 182, 291
HapII CCGG 1 cut(s) 140
Hin1II CATG 7 cut(s) 54, 113, 167, 265, 328, 499, 503
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HinfI GANTC 3 cut(s) 35, 58, 347
HpaII CCGG 1 cut(s) 140
HphI GGTGA 7 cut(s) 89, 103, 317, 340, 356, 416, 466
Hpy166II GTNNAC 3 cut(s) 259, 331, 457
Hpy188I TCNGA 4 cut(s) 72, 183, 210, 489
Hpy188III TCNNGA 2 cut(s) 110, 359
Hpy8I GTNNAC 3 cut(s) 259, 331, 457
HpyAV CCTTC 2 cut(s) 49, 421
HpyCH4III ACNGT 1 cut(s) 229
HpyCH4V TGCA 1 cut(s) 499
HpyF3I CTNAG 1 cut(s) 71
Hsp92II CATG 7 cut(s) 54, 113, 167, 265, 328, 499, 503
Kzo9I GATC 3 cut(s) 205, 237, 289
MaeIII GTNAC 1 cut(s) 281
MalI GATC 3 cut(s) 207, 239, 291
MbiI CCGCTC 1 cut(s) 75
MboI GATC 3 cut(s) 205, 237, 289
MboII GAAGA 2 cut(s) 95, 98
MluCI AATT 1 cut(s) 80
MlyI GAGTC 1 cut(s) 356
MnlI CCTC 2 cut(s) 160, 442
Mph1103I ATGCAT 1 cut(s) 501
MseI TTAA 1 cut(s) 147
MslI CAYNNNNRTG 2 cut(s) 168, 449
MspI CCGG 1 cut(s) 140
MspR9I CCNGG 1 cut(s) 13
MvaI CCWGG 1 cut(s) 13
NdeII GATC 3 cut(s) 205, 237, 289
NlaIII CATG 7 cut(s) 54, 113, 167, 265, 328, 499, 503
NsiI ATGCAT 1 cut(s) 501
NspI RCATGY 1 cut(s) 54
PagI TCATGA 1 cut(s) 109
PaqCI CACCTGC 1 cut(s) 392
PciI ACATGT 1 cut(s) 50
PfeI GAWTC 2 cut(s) 35, 58
PleI GAGTC 1 cut(s) 355
PpsI GAGTC 1 cut(s) 355
PscI ACATGT 1 cut(s) 50
Psp6I CCWGG 1 cut(s) 11
PspGI CCWGG 1 cut(s) 11
RsaI GTAC 2 cut(s) 382, 481
RsaNI GTAC 2 cut(s) 381, 480
RseI CAYNNNNRTG 2 cut(s) 168, 449
SaqAI TTAA 1 cut(s) 147
Sau3AI GATC 3 cut(s) 205, 237, 289
SchI GAGTC 1 cut(s) 356
ScrFI CCNGG 1 cut(s) 13
SetI ASST 3 cut(s) 346, 406, 453
SmiMI CAYNNNNRTG 2 cut(s) 168, 449
Sse9I AATT 1 cut(s) 80
SsiI CCGC 1 cut(s) 75
StyD4I CCNGG 1 cut(s) 11
TaaI ACNGT 1 cut(s) 229
TasI AATT 1 cut(s) 80
TfiI GAWTC 2 cut(s) 35, 58
Tru1I TTAA 1 cut(s) 147
Tru9I TTAA 1 cut(s) 147
TspDTI ATGAA 3 cut(s) 17, 98, 313
TspGWI ACGGA 1 cut(s) 368
XapI RAATTY 1 cut(s) 80
XceI RCATGY 1 cut(s) 54
Zsp2I ATGCAT 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.