FvH4_2g34420

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
25581757 .. 25586672
4916 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g34420.t1

Sequence Viewer

Length: 1446 bp
ATGGTAGCGATTTTCACATACGTTTTCGTTTCTCTTTTAACCCTTATCTTCTTGTACATTTTCATGAAGAAGAGCAAGGGAGGAGGAGAAGAAGACCCCCATGATGATCATGGTCATAAGAATAGGGCGGCTCAGCTCCCTCCAGGCTCATTTGGTTGGCCTTATATCGGTGAGACCCTTCAGCTCTATTCTCAGGACCCAAACACTTTCTTCTCTTCCAGACAGAAAAGGTATGGGAAAATTTTTAAGACACATATACTTGGGAGTCCATGTGTGATGCTGGCGAGCCCGGAGGCTGCAAAGTTTGTATTGGTCACTCAAGCTCACTTGTTCAAGCCCACCTATCCCAAAAGCAAAGAGGCTCTGATTGGTCCCTCCGCATTATTTTTCCACCATGGAGATTACCATTTCAGACTGAGGAAGCTTGTTCAGCGATCTCTCAGTCCTGATGCTATTCGGAATTTGGTGCCCCATATCGACGCCACAGCTGCCTCTGTGACCTCGGAATGGTGGGGCACCGGGAAAGTCATCAACACCTTCCATGAGATGAAGAAGTTTTCTTTCGAAGTTGGTGTACTAGTAATTTTTGGCCAATTGGAGACCCGCTACAAAGAAGAACTGAGGAAAAACTATATGGCAGTGAACAAAGGCTACAATTCATTTCCCATAAACATTCCTGGAACGCCATACAAAAAGGCTTTGTTGGCGAGGGAGAGGCTGAGGCACATTATCGGTGACATTATCCATGAGAGAAAGGAGAAGAGGTTACCTGAAAAGGATCTGTTGGGTTGTTTGCTGAGATCAATAAACGAAGGAGGGGAAGTTTTGAGTGATGACCAAATCGCAGACAACATAATAGGTGTTCTCTTTGCTGCTCAAGACACCACAGCCAGTGTCATGACCTGGATTTTCAAGTACCTCCATGACGAACCAAAAATCCTAGAAGCTGTTAAGGCCGAACAAAATGCAATTCGCCTATCAAATGAACAAGCAGGTAACCAACCATTGAGTTGGGCAGACACCAGAAACATGCCAATTAGTTACAAGGTTGTGTTGGAGAGTTTGAGACTGTCAAGCATTATATCATTCCTTTTTAGAGAAGCTGTGGTTGATGTGGAGTACAAAGGTTACTTGATTCCAAAAGGTTGGAAGGTGATGCCTTTGTTCAGGAACATTCATCATAATCCTGAATTCTTCACCGACCCTCAGAAATTCGATCTTTCTAGATTCGAGGTTGCACCAAAGCCAAATACATTTATGCCATTTGGCAGTGGAGTCCATGCTTGTCCAGGAAACGAGCTTGCTAAGCTGGAATTACTGATCATGATCCACCATTTAGTCACCAATTTCAGGTGGGAAATTGAGGGATCCCAAAGCGGGACCGAGTATAGTCCATTTCCTGTACCTCTGAATGGACTTCCGGTCAAACTTTGGAAATTAGAATAG

Protein Analysis

482

Amino Acids

54.79

Weight (kDa)

8.99

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 460 2.9e-71 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 983
AccB1I GGYRCC 2 cut(s) 466, 515
AciI CCGC 4 cut(s) 128, 378, 604, 1377
AclWI GGATC 4 cut(s) 786, 1321, 1362, 1375
AcoI YGGCCR 1 cut(s) 589
AcsI RAATTY 4 cut(s) 240, 460, 1190, 1211
AcuI CTGAAG 1 cut(s) 164
AcyI GRCGYC 1 cut(s) 480
AfaI GTAC 5 cut(s) 56, 576, 917, 1121, 1404
AfiI CCNNNNNNNGG 5 cut(s) 167, 507, 1350, 1377, 1412
AgsI TTSAA 2 cut(s) 334, 913
AhdI GACNNNNNGTC 1 cut(s) 1421
AhlI ACTAGT 1 cut(s) 577
AjnI CCWGG 4 cut(s) 142, 676, 902, 1288
AloI GAACNNNNNNTCC 2 cut(s) 921, 953
AluBI AGCT 9 cut(s) 136, 184, 323, 424, 488, 947, 1103, 1300, 1309
AluI AGCT 9 cut(s) 136, 184, 323, 424, 488, 947, 1103, 1300, 1309
Alw26I GTCTC 3 cut(s) 167, 593, 1060
AlwI GGATC 4 cut(s) 786, 1321, 1362, 1375
AoxI GGCC 3 cut(s) 158, 589, 954
ApeKI GCWGC 3 cut(s) 296, 488, 872
ApoI RAATTY 4 cut(s) 240, 460, 1190, 1211
AspS9I GGNCC 3 cut(s) 196, 371, 1380
AsuC2I CCSGG 2 cut(s) 290, 520
AsuHPI GGTGA 5 cut(s) 182, 746, 1165, 1189, 1333
AsuII TTCGAA 1 cut(s) 564
AvaII GGWCC 3 cut(s) 196, 371, 1380
BaeGI GKGCMC 2 cut(s) 471, 518
BalI TGGCCA 1 cut(s) 591
BamHI GGATCC 1 cut(s) 1367
BanI GGYRCC 2 cut(s) 466, 515
BanII GRGCYC 1 cut(s) 290
BarI GAAGNNNNNNTAC 2 cut(s) 558, 590
BbsI GAAGAC 1 cut(s) 99
BbvCI CCTCAGC 1 cut(s) 719
BbvI GCAGC 3 cut(s) 283, 475, 859
BcgI CGANNNNNNTGC 2 cut(s) 947, 981
BciT130I CCWGG 4 cut(s) 144, 678, 904, 1290
BclI TGATCA 2 cut(s) 106, 1320
BcnI CCSGG 2 cut(s) 290, 520
BcoDI GTCTC 3 cut(s) 167, 593, 1060
BcuI ACTAGT 1 cut(s) 577
BfaI CTAG 3 cut(s) 578, 941, 1224
BfuAI ACCTGC 1 cut(s) 983
BisI GCNGC 4 cut(s) 129, 297, 489, 873
BlpI GCTNAGC 2 cut(s) 132, 1305
BlsI GCNGC 4 cut(s) 130, 298, 490, 874
Bme1390I CCNGG 6 cut(s) 144, 290, 520, 678, 904, 1290
Bme18I GGWCC 3 cut(s) 196, 371, 1380
BmeRI GACNNNNNGTC 1 cut(s) 1421
BmgT120I GGNCC 3 cut(s) 196, 371, 1380
BmiI GGNNCC 6 cut(s) 198, 373, 468, 517, 1369, 1381
BmrFI CCNGG 6 cut(s) 144, 290, 520, 678, 904, 1290
BmsI GCATC 3 cut(s) 267, 439, 1146
BpiI GAAGAC 1 cut(s) 99
BpmI CTGGAG 1 cut(s) 126
Bpu10I CCTNAGC 1 cut(s) 719
Bpu1102I GCTNAGC 2 cut(s) 132, 1305
Bpu14I TTCGAA 1 cut(s) 564
BpuEI CTTGAG 2 cut(s) 303, 861
BpuMI CCSGG 2 cut(s) 290, 520
BsaBI GATNNNNATC 1 cut(s) 1325
BsaHI GRCGYC 1 cut(s) 480
BsaI GGTCTC 2 cut(s) 167, 593
BsaJI CCNNGG 2 cut(s) 394, 501
BsaWI WCCGGW 1 cut(s) 1420
BsaXI ACNNNNNCTCC 6 cut(s) 256, 286, 749, 779, 807, 837
Bsc4I CCNNNNNNNGG 5 cut(s) 167, 507, 1350, 1377, 1412
Bse1I ACTGG 1 cut(s) 891
Bse8I GATNNNNATC 1 cut(s) 1325
BseBI CCWGG 4 cut(s) 144, 678, 904, 1290
BseDI CCNNGG 2 cut(s) 394, 501
BseJI GATNNNNATC 1 cut(s) 1325
BseLI CCNNNNNNNGG 5 cut(s) 167, 507, 1350, 1377, 1412
BseMII CTCAG 8 cut(s) 146, 206, 407, 454, 611, 710, 788, 1220
BseNI ACTGG 1 cut(s) 891
BseRI GAGGAG 2 cut(s) 96, 99
BseSI GKGCMC 2 cut(s) 471, 518
BseXI GCAGC 3 cut(s) 283, 475, 859
BshFI GGCC 3 cut(s) 160, 591, 956
BshNI GGYRCC 2 cut(s) 466, 515
BsiSI CCGG 3 cut(s) 290, 519, 1421
BslFI GGGAC 2 cut(s) 357, 1393
BslI CCNNNNNNNGG 5 cut(s) 167, 507, 1350, 1377, 1412
BsmAI GTCTC 3 cut(s) 167, 593, 1060
BsmFI GGGAC 2 cut(s) 357, 1393
BsnI GGCC 3 cut(s) 160, 591, 956
Bso31I GGTCTC 2 cut(s) 167, 593
Bsp119I TTCGAA 1 cut(s) 564
Bsp1286I GDGCHC 3 cut(s) 290, 471, 518
Bsp1407I TGTACA 1 cut(s) 54
Bsp143I GATC 8 cut(s) 106, 434, 778, 800, 1216, 1320, 1326, 1367
Bsp1720I GCTNAGC 2 cut(s) 132, 1305
Bsp19I CCATGG 1 cut(s) 394
BspACI CCGC 4 cut(s) 128, 378, 604, 1377
BspANI GGCC 3 cut(s) 160, 591, 956
BspCNI CTCAG 8 cut(s) 145, 205, 408, 453, 612, 711, 789, 1219
BspHI TCATGA 3 cut(s) 63, 897, 1323
BspLI GGNNCC 6 cut(s) 198, 373, 468, 517, 1369, 1381
BspMI ACCTGC 1 cut(s) 983
BspPI GGATC 4 cut(s) 786, 1321, 1362, 1375
BspQI GCTCTTC 1 cut(s) 65
BspT104I TTCGAA 1 cut(s) 564
BspT107I GGYRCC 2 cut(s) 466, 515
BspTNI GGTCTC 2 cut(s) 167, 593
BsrGI TGTACA 1 cut(s) 54
BsrI ACTGG 1 cut(s) 891
BssECI CCNNGG 2 cut(s) 394, 501
BssMI GATC 8 cut(s) 106, 434, 778, 800, 1216, 1320, 1326, 1367
BssNI GRCGYC 1 cut(s) 480
BssT1I CCWWGG 1 cut(s) 394
Bst2UI CCWGG 4 cut(s) 144, 678, 904, 1290
Bst4CI ACNGT 1 cut(s) 1071
Bst6I CTCTTC 3 cut(s) 65, 220, 755
BstACI GRCGYC 1 cut(s) 480
BstAUI TGTACA 1 cut(s) 54
BstBI TTCGAA 1 cut(s) 564
BstC8I GCNNGC 3 cut(s) 282, 286, 1302
BstDEI CTNAG 9 cut(s) 132, 192, 416, 440, 620, 719, 797, 1206, 1305
BstDSI CCRYGG 1 cut(s) 394
BstEII GGTNACC 2 cut(s) 765, 995
BstKTI GATC 8 cut(s) 109, 437, 781, 803, 1219, 1323, 1329, 1370
BstMAI GTCTC 3 cut(s) 167, 593, 1060
BstMBI GATC 8 cut(s) 106, 434, 778, 800, 1216, 1320, 1326, 1367
BstMWI GCNNNNNNNGC 5 cut(s) 430, 488, 704, 953, 1306
BstNI CCWGG 4 cut(s) 144, 678, 904, 1290
BstNSI RCATGY 1 cut(s) 1033
BstPI GGTNACC 2 cut(s) 765, 995
BstSCI CCNGG 6 cut(s) 142, 288, 518, 676, 902, 1288
BstSLI GKGCMC 2 cut(s) 471, 518
BstV1I GCAGC 3 cut(s) 283, 475, 859
BstV2I GAAGAC 1 cut(s) 99
BstX2I RGATCY 2 cut(s) 778, 1367
BstXI CCANNNNNNTGG 2 cut(s) 1011, 1146
BstYI RGATCY 2 cut(s) 778, 1367
BsuRI GGCC 3 cut(s) 160, 591, 956
BtgI CCRYGG 1 cut(s) 394
BtsI GCAGTG 2 cut(s) 645, 1276
BtsIMutI CAGTG 3 cut(s) 645, 898, 1276
BveI ACCTGC 1 cut(s) 983
Cac8I GCNNGC 3 cut(s) 282, 286, 1302
CciI TCATGA 3 cut(s) 63, 897, 1323
Cfr13I GGNCC 3 cut(s) 196, 371, 1380
CseI GACGC 1 cut(s) 488
Csp6I GTAC 5 cut(s) 55, 575, 916, 1120, 1403
CviQI GTAC 5 cut(s) 55, 575, 916, 1120, 1403
DdeI CTNAG 9 cut(s) 132, 192, 416, 440, 620, 719, 797, 1206, 1305
DpnI GATC 8 cut(s) 108, 436, 780, 802, 1218, 1322, 1328, 1369
DpnII GATC 8 cut(s) 106, 434, 778, 800, 1216, 1320, 1326, 1367
DriI GACNNNNNGTC 1 cut(s) 1421
EaeI YGGCCR 1 cut(s) 589
Eam1104I CTCTTC 3 cut(s) 65, 220, 755
Eam1105I GACNNNNNGTC 1 cut(s) 1421
EarI CTCTTC 3 cut(s) 65, 220, 755
Eco130I CCWWGG 1 cut(s) 394
Eco24I GRGCYC 1 cut(s) 290
Eco31I GGTCTC 2 cut(s) 167, 593
Eco47I GGWCC 3 cut(s) 196, 371, 1380
Eco57I CTGAAG 1 cut(s) 164
Eco91I GGTNACC 2 cut(s) 765, 995
EcoO109I RGGNCCY 1 cut(s) 196
EcoO65I GGTNACC 2 cut(s) 765, 995
EcoRI GAATTC 1 cut(s) 1190
EcoRII CCWGG 4 cut(s) 142, 676, 902, 1288
EcoT14I CCWWGG 1 cut(s) 394
EcoT38I GRGCYC 1 cut(s) 290
ErhI CCWWGG 1 cut(s) 394
FaqI GGGAC 2 cut(s) 357, 1393
FauI CCCGC 2 cut(s) 611, 1370
FbaI TGATCA 2 cut(s) 106, 1320
Fnu4HI GCNGC 4 cut(s) 129, 297, 489, 873
FriOI GRGCYC 1 cut(s) 290
Fsp4HI GCNGC 4 cut(s) 129, 297, 489, 873
FspBI CTAG 3 cut(s) 578, 941, 1224
GluI GCNGC 4 cut(s) 129, 297, 489, 873
GsuI CTGGAG 1 cut(s) 126
HaeIII GGCC 3 cut(s) 160, 591, 956
HapII CCGG 3 cut(s) 290, 519, 1421
HgaI GACGC 1 cut(s) 488
Hin1I GRCGYC 1 cut(s) 480
HindIII AAGCTT 1 cut(s) 422
HinfI GANTC 4 cut(s) 265, 1135, 1227, 1275
HpaII CCGG 3 cut(s) 290, 519, 1421
HphI GGTGA 5 cut(s) 182, 746, 1165, 1189, 1333
Hpy166II GTNNAC 2 cut(s) 575, 643
Hpy188I TCNGA 6 cut(s) 366, 413, 459, 505, 1209, 1410
Hpy8I GTNNAC 2 cut(s) 575, 643
Hpy99I CGWCG 1 cut(s) 482
HpyAV CCTTC 4 cut(s) 188, 547, 806, 1144
HpyCH4III ACNGT 1 cut(s) 1071
HpyCH4IV ACGT 1 cut(s) 21
HpyCH4V TGCA 3 cut(s) 299, 968, 1238
HpyF10VI GCNNNNNNNGC 5 cut(s) 430, 488, 704, 953, 1306
HpyF3I CTNAG 9 cut(s) 132, 192, 416, 440, 620, 719, 797, 1206, 1305
HpySE526I ACGT 1 cut(s) 21
Hsp92I GRCGYC 1 cut(s) 480
Ksp22I TGATCA 2 cut(s) 106, 1320
Kzo9I GATC 8 cut(s) 106, 434, 778, 800, 1216, 1320, 1326, 1367
LguI GCTCTTC 1 cut(s) 65
LmnI GCTCC 1 cut(s) 141
Lsp1109I GCAGC 3 cut(s) 283, 475, 859
LweI GCATC 3 cut(s) 267, 439, 1146
MaeI CTAG 3 cut(s) 578, 941, 1224
MaeII ACGT 1 cut(s) 21
MaeIII GTNAC 8 cut(s) 313, 496, 734, 765, 995, 1040, 1127, 1339
MalI GATC 8 cut(s) 108, 436, 780, 802, 1218, 1322, 1328, 1369
MboI GATC 8 cut(s) 106, 434, 778, 800, 1216, 1320, 1326, 1367
MfeI CAATTG 1 cut(s) 593
MflI RGATCY 2 cut(s) 778, 1367
MhlI GDGCHC 3 cut(s) 290, 471, 518
MlsI TGGCCA 1 cut(s) 591
MluNI TGGCCA 1 cut(s) 591
MlyI GAGTC 2 cut(s) 274, 1284
MmeI TCCRAC 2 cut(s) 1035, 1127
Mox20I TGGCCA 1 cut(s) 591
MscI TGGCCA 1 cut(s) 591
MseI TTAA 3 cut(s) 38, 246, 951
MslI CAYNNNNRTG 1 cut(s) 62
Msp20I TGGCCA 1 cut(s) 591
MspA1I CMGCKG 1 cut(s) 488
MspI CCGG 3 cut(s) 290, 519, 1421
MspR9I CCNGG 6 cut(s) 144, 290, 520, 678, 904, 1290
MunI CAATTG 1 cut(s) 593
MvaI CCWGG 4 cut(s) 144, 678, 904, 1290
MwoI GCNNNNNNNGC 5 cut(s) 430, 488, 704, 953, 1306
NciI CCSGG 2 cut(s) 290, 520
NcoI CCATGG 1 cut(s) 394
NdeII GATC 8 cut(s) 106, 434, 778, 800, 1216, 1320, 1326, 1367
NlaIV GGNNCC 6 cut(s) 198, 373, 468, 517, 1369, 1381
NmuCI GTSAC 4 cut(s) 313, 496, 734, 1339
NspI RCATGY 1 cut(s) 1033
NspV TTCGAA 1 cut(s) 564
PagI TCATGA 3 cut(s) 63, 897, 1323
PciSI GCTCTTC 1 cut(s) 65
PfeI GAWTC 2 cut(s) 1135, 1227
PfoI TCCNGGA 2 cut(s) 676, 1288
PkrI GCNGC 4 cut(s) 130, 298, 490, 874
PleI GAGTC 2 cut(s) 273, 1283
PpsI GAGTC 2 cut(s) 273, 1283
PpuMI RGGWCCY 1 cut(s) 196
Psp5II RGGWCCY 1 cut(s) 196
Psp6I CCWGG 4 cut(s) 142, 676, 902, 1288
PspEI GGTNACC 2 cut(s) 765, 995
PspGI CCWGG 4 cut(s) 142, 676, 902, 1288
PspN4I GGNNCC 6 cut(s) 198, 373, 468, 517, 1369, 1381
PspPI GGNCC 3 cut(s) 196, 371, 1380
PspPPI RGGWCCY 1 cut(s) 196
PsrI GAACNNNNNNTAC 2 cut(s) 635, 667
PsuI RGATCY 2 cut(s) 778, 1367
PvuII CAGCTG 1 cut(s) 488
RsaI GTAC 5 cut(s) 56, 576, 917, 1121, 1404
RsaNI GTAC 5 cut(s) 55, 575, 916, 1120, 1403
RseI CAYNNNNRTG 1 cut(s) 62
SapI GCTCTTC 1 cut(s) 65
SaqAI TTAA 3 cut(s) 38, 246, 951
SatI GCNGC 4 cut(s) 129, 297, 489, 873
Sau3AI GATC 8 cut(s) 106, 434, 778, 800, 1216, 1320, 1326, 1367
Sau96I GGNCC 3 cut(s) 196, 371, 1380
SchI GAGTC 2 cut(s) 274, 1284
ScrFI CCNGG 6 cut(s) 144, 290, 520, 678, 904, 1290
SduI GDGCHC 3 cut(s) 290, 471, 518
SfaNI GCATC 3 cut(s) 267, 439, 1146
SfuI TTCGAA 1 cut(s) 564
SinI GGWCC 3 cut(s) 196, 371, 1380
SmiMI CAYNNNNRTG 1 cut(s) 62
SmlI CTYRAG 2 cut(s) 318, 876
SmoI CTYRAG 2 cut(s) 318, 876
SpeI ACTAGT 1 cut(s) 577
SsiI CCGC 4 cut(s) 128, 378, 604, 1377
SspMI CTAG 3 cut(s) 578, 941, 1224
StyD4I CCNGG 6 cut(s) 142, 288, 518, 676, 902, 1288
StyI CCWWGG 1 cut(s) 394
TaaI ACNGT 1 cut(s) 1071
TaiI ACGT 1 cut(s) 24
TaqI TCGA 4 cut(s) 477, 564, 1215, 1230
TaqII GACCGA 1 cut(s) 1397
TatI WGTACW 3 cut(s) 54, 574, 1119
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 2 cut(s) 1135, 1227
Tru1I TTAA 3 cut(s) 38, 246, 951
Tru9I TTAA 3 cut(s) 38, 246, 951
TscAI CASTG 3 cut(s) 645, 898, 1276
TseFI GTSAC 4 cut(s) 313, 496, 734, 1339
TseI GCWGC 3 cut(s) 296, 488, 872
Tsp45I GTSAC 4 cut(s) 313, 496, 734, 1339
TspDTI ATGAA 6 cut(s) 52, 80, 563, 648, 999, 1166
TspRI CASTG 3 cut(s) 645, 898, 1276
VpaK11BI GGWCC 3 cut(s) 196, 371, 1380
XapI RAATTY 4 cut(s) 240, 460, 1190, 1211
XbaI TCTAGA 1 cut(s) 1223
XceI RCATGY 1 cut(s) 1033
XcmI CCANNNNNNNNNTGG 1 cut(s) 107
XspI CTAG 3 cut(s) 578, 941, 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.