MD02G1171600.v1.1

Cytochrome P450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
14863605 .. 14867743
4139 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1171600.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGTATATTGTTTTTCCTCTTTACAATTTTCTTCTTATTGCTCTTTTTCCATTCATCTTATTACTTGCAAAACAAGTGAGATCACGGAAACCTAGAGCAAATCTACCTCCAGGTTCAATGGGATGGCCCTATGTAGGTGAAACCATGCAACTATACTCTCAAAACCCTAATGTCTTTTTTTCCTCTAGGCACAACACGTACGGAGAAGTTTTCAAGACTCACATACTTGGCAGTCCTTGTGTGATGCTGTCTAGCCCAGAGGCTGTGCGGTTTGTGCTGGTGACTCAGGCACACTTGTTTAAACCTACATACCCTCAAAGTAAAGAAAGATTAATTGGTCCCTCAGCACTTTTCTTCCATCAAGATGACTACCATGCACAGATTAGAAGATTAGTCCAAGGATCTTTGTCCTTGGATGTTATCAGAAACTCGGTGCCAGATATTGAAGCCGTTGCCATTTCTACCTTAGACTCGTGGTCTGGAAAAGTTGTTAACACCTTTTATGAGTTAAAGAAGTTCACCTTCGATGTTGCTGTCTTGTTTATCTTTGGTCACTTGAACAATCAATACAAAGAGATGCTCAAGAAAAACTACTACACTCTAGACAAAGGCTACAATTCTTTCCCTACAAAACTCCCAGGCACCTTGTACAATAAATCGGTTTTGGCAAGGAGGAGACTGAGCTTAATTCTCGGTGAGATAATAAAAGAGAGAAAAGAAAAGAGTTTGGTGCGTAAAGATCTATTGGGCAACCTATTGTACTTCAAAGATGATAAGGGAGAAGCACTAACACACGATCAAATCGTTGACAACATCATTGGAGTAATGTTTGCTGCTCAGGACACCACAGCCAGTCTCTTAACTTGGATGATCAAATACATACACGATGACTCAAAGCTTCAAGAAGCTATCCAGATAGAACAGAAGACAATTTTTGAATCAAATGAAGGAGGAAGTCATTCGCTGAGTTGGTCACAGACTAGAAATATGCCCCTTACCAGCAGGGCTATAAAGGAGAGCTTGAGGATGGCAAGCATCGTCTCTTTCACCTTTAGGGAAGCTGTCGAAGATGTTGAATACAAAGGATACTTGATCCCAAAGGGATGGAAGGTACTGCCTTTGTTCCGGAACATCCATCATAATCCTGAATTCTTTGTTGATCCGCATAAATTCAATCCATCAAGATTTGAGCTCGGAGTAAAACCCAACACATTCATGCCATTTGGAAACGGACTTCATATCTGTCCAGGAAATGAAGTTGCCAAGCTGGAGATGCTTATTTTCATCCACCATCTTGTTAACAAGTTTAGATGGGAAGTGGTGAGGTCGAGTGGGGGGGTTCATTACGACCCATTTCCAATACCTCAGCAAGGACTTCCAGCCAAGTTTTGGAAGGATTCAAGCCAGTTAAGGACCACAAGGCCAGGCTAG

Protein Analysis

477

Amino Acids

54.7

Weight (kDa)

9.46

Isoelectric Point (pI)

47.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 442 4.8e-71 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 433, 641
AccB7I CCANNNNNTGG 1 cut(s) 1389
AccIII TCCGGA 1 cut(s) 1125
AciI CCGC 2 cut(s) 268, 1163
AclWI GGATC 3 cut(s) 409, 1087, 1154
AcsI RAATTY 2 cut(s) 1148, 1169
AfaI GTAC 4 cut(s) 200, 650, 761, 1113
AfiI CCNNNNNNNGG 3 cut(s) 134, 1370, 1389
AflIII ACRYGT 1 cut(s) 195
AhdI GACNNNNNGTC 1 cut(s) 475
AjnI CCWGG 4 cut(s) 109, 637, 1246, 1423
AjuI GAANNNNNNNTTGG 2 cut(s) 318, 350
AluBI AGCT 7 cut(s) 684, 898, 908, 1020, 1061, 1192, 1267
AluI AGCT 7 cut(s) 684, 898, 908, 1020, 1061, 1192, 1267
Alw21I GWGCWC 1 cut(s) 1194
Alw26I GTCTC 3 cut(s) 670, 860, 1045
AlwI GGATC 3 cut(s) 409, 1087, 1154
AlwNI CAGNNNCTG 1 cut(s) 263
Aor13HI TCCGGA 1 cut(s) 1125
AoxI GGCC 2 cut(s) 125, 1421
ApeKI GCWGC 1 cut(s) 833
ApoI RAATTY 2 cut(s) 1148, 1169
AseI ATTAAT 1 cut(s) 332
Asp700I GAANNNNTTC 1 cut(s) 958
AspS9I GGNCC 3 cut(s) 126, 338, 1413
AsuHPI GGTGA 6 cut(s) 149, 292, 511, 707, 1039, 1333
AvaII GGWCC 2 cut(s) 338, 1413
BanI GGYRCC 2 cut(s) 433, 641
BanII GRGCYC 1 cut(s) 1194
BauI CACGAG 1 cut(s) 472
BbsI GAAGAC 1 cut(s) 932
Bbv12I GWGCWC 1 cut(s) 1194
BbvCI CCTCAGC 2 cut(s) 343, 1365
BbvI GCAGC 1 cut(s) 820
BccI CCATC 8 cut(s) 117, 366, 1021, 1098, 1143, 1186, 1299, 1305
BceAI ACGGC 1 cut(s) 434
BciT130I CCWGG 4 cut(s) 111, 639, 1248, 1425
BciVI GTATCC 1 cut(s) 1079
BclI TGATCA 1 cut(s) 870
BcoDI GTCTC 3 cut(s) 670, 860, 1045
BfaI CTAG 6 cut(s) 93, 186, 252, 602, 981, 1429
BfuI GTATCC 1 cut(s) 1079
BglII AGATCT 1 cut(s) 739
BisI GCNGC 1 cut(s) 834
BlsI GCNGC 1 cut(s) 835
Bme1390I CCNGG 4 cut(s) 111, 639, 1248, 1425
Bme18I GGWCC 2 cut(s) 338, 1413
BmeRI GACNNNNNGTC 1 cut(s) 475
BmgT120I GGNCC 3 cut(s) 126, 338, 1413
BmiI GGNNCC 3 cut(s) 340, 435, 643
BmrFI CCNGG 4 cut(s) 111, 639, 1248, 1425
BmsI GCATC 4 cut(s) 234, 567, 1044, 1263
BpiI GAAGAC 1 cut(s) 932
BpmI CTGGAG 2 cut(s) 93, 1289
Bpu10I CCTNAGC 3 cut(s) 343, 837, 1365
BpuEI CTTGAG 2 cut(s) 566, 1042
BsaAI YACGTR 1 cut(s) 198
BsaJI CCNNGG 3 cut(s) 397, 411, 637
BsaWI WCCGGW 1 cut(s) 1125
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 1370, 1389
Bse1I ACTGG 2 cut(s) 852, 1405
BseAI TCCGGA 1 cut(s) 1125
BseBI CCWGG 4 cut(s) 111, 639, 1248, 1425
BseDI CCNNGG 3 cut(s) 397, 411, 637
BseGI GGATG 7 cut(s) 128, 421, 873, 1032, 1109, 1131, 1284
BseLI CCNNNNNNNGG 3 cut(s) 134, 1370, 1389
BseMII CTCAG 6 cut(s) 299, 357, 671, 851, 956, 1379
BseNI ACTGG 2 cut(s) 852, 1405
BseRI GAGGAG 1 cut(s) 688
BseXI GCAGC 1 cut(s) 820
BshFI GGCC 2 cut(s) 127, 1423
BshNI GGYRCC 2 cut(s) 433, 641
BsiHKAI GWGCWC 1 cut(s) 1194
BsiSI CCGG 1 cut(s) 1126
BsiWI CGTACG 1 cut(s) 198
BslFI GGGAC 1 cut(s) 324
BslI CCNNNNNNNGG 3 cut(s) 134, 1370, 1389
BsmAI GTCTC 3 cut(s) 670, 860, 1045
BsmBI CGTCTC 1 cut(s) 1045
BsmFI GGGAC 1 cut(s) 324
BsnI GGCC 2 cut(s) 127, 1423
Bsp1286I GDGCHC 1 cut(s) 1194
Bsp13I TCCGGA 1 cut(s) 1125
Bsp1407I TGTACA 1 cut(s) 648
Bsp143I GATC 7 cut(s) 80, 401, 739, 796, 870, 1092, 1159
BspACI CCGC 2 cut(s) 268, 1163
BspANI GGCC 2 cut(s) 127, 1423
BspCNI CTCAG 6 cut(s) 298, 356, 672, 850, 957, 1378
BspEI TCCGGA 1 cut(s) 1125
BspLI GGNNCC 3 cut(s) 340, 435, 643
BspPI GGATC 3 cut(s) 409, 1087, 1154
BspT107I GGYRCC 2 cut(s) 433, 641
BsrGI TGTACA 1 cut(s) 648
BsrI ACTGG 2 cut(s) 852, 1405
BssECI CCNNGG 3 cut(s) 397, 411, 637
BssMI GATC 7 cut(s) 80, 401, 739, 796, 870, 1092, 1159
BssSI CACGAG 1 cut(s) 472
BssT1I CCWWGG 2 cut(s) 397, 411
Bst2BI CACGAG 1 cut(s) 472
Bst2UI CCWGG 4 cut(s) 111, 639, 1248, 1425
BstAUI TGTACA 1 cut(s) 648
BstBAI YACGTR 1 cut(s) 198
BstC8I GCNNGC 1 cut(s) 1033
BstDEI CTNAG 7 cut(s) 285, 343, 466, 680, 837, 965, 1365
BstENI CCTNNNNNAGG 1 cut(s) 1368
BstF5I GGATG 7 cut(s) 128, 421, 873, 1032, 1109, 1131, 1284
BstKTI GATC 7 cut(s) 83, 404, 742, 799, 873, 1095, 1162
BstMAI GTCTC 3 cut(s) 670, 860, 1045
BstMBI GATC 7 cut(s) 80, 401, 739, 796, 870, 1092, 1159
BstMWI GCNNNNNNNGC 2 cut(s) 274, 1273
BstNI CCWGG 4 cut(s) 111, 639, 1248, 1425
BstSCI CCNGG 4 cut(s) 109, 637, 1246, 1423
BstV1I GCAGC 1 cut(s) 820
BstV2I GAAGAC 1 cut(s) 932
BstX2I RGATCY 2 cut(s) 401, 739
BstXI CCANNNNNNTGG 1 cut(s) 1104
BstYI RGATCY 2 cut(s) 401, 739
BsuI GTATCC 1 cut(s) 1079
BsuRI GGCC 2 cut(s) 127, 1423
BtsCI GGATG 7 cut(s) 128, 421, 873, 1032, 1109, 1131, 1284
Cac8I GCNNGC 1 cut(s) 1033
CaiI CAGNNNCTG 1 cut(s) 263
Cfr13I GGNCC 3 cut(s) 126, 338, 1413
Csp6I GTAC 4 cut(s) 199, 649, 760, 1112
CviAII CATG 3 cut(s) 145, 374, 1216
CviQI GTAC 4 cut(s) 199, 649, 760, 1112
DdeI CTNAG 7 cut(s) 285, 343, 466, 680, 837, 965, 1365
DpnI GATC 7 cut(s) 82, 403, 741, 798, 872, 1094, 1161
DpnII GATC 7 cut(s) 80, 401, 739, 796, 870, 1092, 1159
DraI TTTAAA 1 cut(s) 301
DriI GACNNNNNGTC 1 cut(s) 475
Eam1105I GACNNNNNGTC 1 cut(s) 475
Ecl136II GAGCTC 1 cut(s) 1192
Eco130I CCWWGG 2 cut(s) 397, 411
Eco24I GRGCYC 1 cut(s) 1194
Eco47I GGWCC 2 cut(s) 338, 1413
Eco53kI GAGCTC 1 cut(s) 1192
EcoICRI GAGCTC 1 cut(s) 1192
EcoNI CCTNNNNNAGG 1 cut(s) 1368
EcoRI GAATTC 1 cut(s) 1148
EcoRII CCWGG 4 cut(s) 109, 637, 1246, 1423
EcoT14I CCWWGG 2 cut(s) 397, 411
EcoT38I GRGCYC 1 cut(s) 1194
ErhI CCWWGG 2 cut(s) 397, 411
Esp3I CGTCTC 1 cut(s) 1045
FaeI CATG 3 cut(s) 148, 377, 1219
FalI AAGNNNNNCTT 4 cut(s) 506, 538, 1004, 1036
FaqI GGGAC 1 cut(s) 324
FatI CATG 3 cut(s) 144, 373, 1215
FbaI TGATCA 1 cut(s) 870
Fnu4HI GCNGC 1 cut(s) 834
FokI GGATG 7 cut(s) 135, 428, 880, 1039, 1116, 1118, 1271
FriOI GRGCYC 1 cut(s) 1194
Fsp4HI GCNGC 1 cut(s) 834
FspBI CTAG 6 cut(s) 93, 186, 252, 602, 981, 1429
GluI GCNGC 1 cut(s) 834
GsuI CTGGAG 2 cut(s) 93, 1289
HaeIII GGCC 2 cut(s) 127, 1423
HapII CCGG 1 cut(s) 1126
Hin1II CATG 3 cut(s) 148, 377, 1219
HincII GTYRAC 3 cut(s) 493, 808, 1300
HindII GTYRAC 3 cut(s) 493, 808, 1300
HindIII AAGCTT 1 cut(s) 896
HinfI GANTC 6 cut(s) 217, 283, 470, 890, 938, 1397
HpaI GTTAAC 2 cut(s) 493, 1300
HpaII CCGG 1 cut(s) 1126
HphI GGTGA 6 cut(s) 149, 292, 511, 707, 1039, 1333
Hpy166II GTNNAC 4 cut(s) 493, 519, 808, 1300
Hpy188I TCNGA 2 cut(s) 425, 1196
Hpy8I GTNNAC 4 cut(s) 493, 519, 808, 1300
HpyAV CCTTC 4 cut(s) 532, 941, 1102, 1387
HpyCH4IV ACGT 1 cut(s) 197
HpyCH4V TGCA 3 cut(s) 68, 148, 377
HpyF10VI GCNNNNNNNGC 2 cut(s) 274, 1273
HpyF3I CTNAG 7 cut(s) 285, 343, 466, 680, 837, 965, 1365
HpySE526I ACGT 1 cut(s) 197
Hsp92II CATG 3 cut(s) 148, 377, 1219
Kpn2I TCCGGA 1 cut(s) 1125
Ksp22I TGATCA 1 cut(s) 870
KspAI GTTAAC 2 cut(s) 493, 1300
Kzo9I GATC 7 cut(s) 80, 401, 739, 796, 870, 1092, 1159
Lsp1109I GCAGC 1 cut(s) 820
LweI GCATC 4 cut(s) 234, 567, 1044, 1263
MaeI CTAG 6 cut(s) 93, 186, 252, 602, 981, 1429
MaeII ACGT 1 cut(s) 197
MaeIII GTNAC 3 cut(s) 280, 551, 972
MalI GATC 7 cut(s) 82, 403, 741, 798, 872, 1094, 1161
MboI GATC 7 cut(s) 80, 401, 739, 796, 870, 1092, 1159
MboII GAAGA 5 cut(s) 23, 346, 399, 937, 1079
MflI RGATCY 2 cut(s) 401, 739
MhlI GDGCHC 1 cut(s) 1194
MluCI AATT 7 cut(s) 25, 333, 616, 687, 930, 1148, 1169
MlyI GAGTC 4 cut(s) 211, 277, 464, 884
MroI TCCGGA 1 cut(s) 1125
MroXI GAANNNNTTC 1 cut(s) 958
MseI TTAA 8 cut(s) 300, 332, 492, 509, 686, 860, 1299, 1409
MslI CAYNNNNRTG 2 cut(s) 363, 1214
MspI CCGG 1 cut(s) 1126
MspR9I CCNGG 4 cut(s) 111, 639, 1248, 1425
MssI GTTTAAAC 1 cut(s) 301
MvaI CCWGG 4 cut(s) 111, 639, 1248, 1425
MwoI GCNNNNNNNGC 2 cut(s) 274, 1273
NdeII GATC 7 cut(s) 80, 401, 739, 796, 870, 1092, 1159
NlaIII CATG 3 cut(s) 148, 377, 1219
NlaIV GGNNCC 3 cut(s) 340, 435, 643
NmuCI GTSAC 3 cut(s) 280, 551, 972
PcsI WCGNNNNNNNCGW 1 cut(s) 801
PdmI GAANNNNTTC 1 cut(s) 958
PfeI GAWTC 2 cut(s) 938, 1397
Pfl23II CGTACG 1 cut(s) 198
PflMI CCANNNNNTGG 1 cut(s) 1389
PfoI TCCNGGA 1 cut(s) 1246
PkrI GCNGC 1 cut(s) 835
PleI GAGTC 4 cut(s) 211, 277, 464, 884
PmeI GTTTAAAC 1 cut(s) 301
PpsI GAGTC 4 cut(s) 211, 277, 464, 884
Ppu21I YACGTR 1 cut(s) 198
PshBI ATTAAT 1 cut(s) 332
Psp124BI GAGCTC 1 cut(s) 1194
Psp6I CCWGG 4 cut(s) 109, 637, 1246, 1423
PspGI CCWGG 4 cut(s) 109, 637, 1246, 1423
PspLI CGTACG 1 cut(s) 198
PspN4I GGNNCC 3 cut(s) 340, 435, 643
PspPI GGNCC 3 cut(s) 126, 338, 1413
PsrI GAACNNNNNNTAC 2 cut(s) 551, 583
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 2 cut(s) 401, 739
RsaI GTAC 4 cut(s) 200, 650, 761, 1113
RsaNI GTAC 4 cut(s) 199, 649, 760, 1112
RseI CAYNNNNRTG 2 cut(s) 363, 1214
SacI GAGCTC 1 cut(s) 1194
SaqAI TTAA 8 cut(s) 300, 332, 492, 509, 686, 860, 1299, 1409
SatI GCNGC 1 cut(s) 834
Sau3AI GATC 7 cut(s) 80, 401, 739, 796, 870, 1092, 1159
Sau96I GGNCC 3 cut(s) 126, 338, 1413
SchI GAGTC 4 cut(s) 211, 277, 464, 884
ScrFI CCNGG 4 cut(s) 111, 639, 1248, 1425
SduI GDGCHC 1 cut(s) 1194
SfaNI GCATC 4 cut(s) 234, 567, 1044, 1263
SinI GGWCC 2 cut(s) 338, 1413
SmiMI CAYNNNNRTG 2 cut(s) 363, 1214
SmlI CTYRAG 2 cut(s) 581, 1021
SmoI CTYRAG 2 cut(s) 581, 1021
Sse9I AATT 7 cut(s) 25, 333, 616, 687, 930, 1148, 1169
SsiI CCGC 2 cut(s) 268, 1163
SspMI CTAG 6 cut(s) 93, 186, 252, 602, 981, 1429
SstI GAGCTC 1 cut(s) 1194
StyD4I CCNGG 4 cut(s) 109, 637, 1246, 1423
StyI CCWWGG 2 cut(s) 397, 411
TaiI ACGT 1 cut(s) 200
TaqI TCGA 3 cut(s) 525, 1065, 1328
TasI AATT 7 cut(s) 25, 333, 616, 687, 930, 1148, 1169
TatI WGTACW 2 cut(s) 648, 759
TfiI GAWTC 2 cut(s) 938, 1397
Tru1I TTAA 8 cut(s) 300, 332, 492, 509, 686, 860, 1299, 1409
Tru9I TTAA 8 cut(s) 300, 332, 492, 509, 686, 860, 1299, 1409
TseFI GTSAC 3 cut(s) 280, 551, 972
TseI GCWGC 1 cut(s) 833
Tsp45I GTSAC 3 cut(s) 280, 551, 972
TspDTI ATGAA 7 cut(s) 43, 960, 1204, 1226, 1269, 1273, 1331
TspGWI ACGGA 3 cut(s) 100, 216, 1245
Van91I CCANNNNNTGG 1 cut(s) 1389
VpaK11BI GGWCC 2 cut(s) 338, 1413
VspI ATTAAT 1 cut(s) 332
XagI CCTNNNNNAGG 1 cut(s) 1368
XapI RAATTY 2 cut(s) 1148, 1169
XbaI TCTAGA 1 cut(s) 601
XcmI CCANNNNNNNNNTGG 1 cut(s) 1386
XmnI GAANNNNTTC 1 cut(s) 958
XspI CTAG 6 cut(s) 93, 186, 252, 602, 981, 1429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.