RLG00000014690

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
56358410 .. 56360735
2326 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014690

Sequence Viewer

Length: 1362 bp
ATGCATAAAGCTAAGCTTCCCCCAGGATCAATGGGATGGCCTTGCATAGGAGAGACTCTACAAATGTACTCTATGGATCCAAACAAATTCTTTGCCACAAAGCAGAAAAGGTATGGAGAGATATTCAAAACCCACATACTTGGCTGTCCTTGTGTCATGTTGGCAAGCCCTGAGGCCACAAAATTTGTGCTGGTGACTCATGCTCACCTCTTCAAGCCCACATACCCGAAGAGCAAGGAGAAGCTGATTGGCCCTTCTGCTTTGTTCTTTCACCAGGGTGATTACCACAGCAGCCTTAAGAAACTCATTCAGAGCTCTCTGTCTCCAAACCCCAACATTATGCAGAAACTGGTTCCTGACATTGAAGCCTTAGCCATTTCTGCCTTGGAATCATGGGCTGCAGCCGGAACTCTCATCAACACCTATCATGAAATGAAGAAGGTCGTGTTTGATGTCGGTTTTCTTGCCATTTTTGGCCGGCTGGATGATAGTTATAGAGAGAAGCTCAAGAAGAACTACCACATCGTAGACGCGGGTTACAATTCTTTTCCAACAAATATACCAGGCACTGCATATCAGAAAGCTCTCTTGGCGAGGAAAAGGCTTAGTCAGATTCTGAGGCAGATAATTTGTGAGAGGAAGGAAAAGAAAATACTGCAGAAAGATCTCTTGGGTGATCTGCTGAATTTTCAAAATGAAAAGGGGCAAAACTTAACTGAGGATCAAATTTCCGATAACATCATTGGAGTACTGTTTGCTGCCCAAGACACTACAGCCAGTGTTTTAACATGGATTCTCAAGTACCTCCATGACAACCAAAGCATTCTTGAAGCTGTGAAGGCCGAGCAGAAGGCAATATATGATGCAAATGATGGGTATAAGAGGCCATTGACTTGGGCACAAATCAGAAATATGCCACTTACACATAGAGTTATATTAGAGAGCTTGAGGATGGCAAGTATTATTTCTTTTGCATTTAGGGAAGCTGTGGTTGATGTAGAATACAAAGGATATCTCATACCAAAGGGTTGGAAGGTCATGCCGTTGTTTAGGAACATACATCACAATCCTGAATTATTCTCTGGTCCTCAAAATTTTGATCCATCTAGGTTTGAGGTTGCTCCAAAGGCTTATACTTTCACACCATTTGGCAAAGGAGTACATGCTTGTCCTGGAAATGAGCTAGCCAAACTGGAGATGCTCATTTTGATCCATCATCTTGTGACTAATTTCAGGTGGGAAGTAGTGGGATCACAAAAAGGGATTCAGTATGGCCCATTTCCAGTTCCTCAGCATGGACTACCAGCCAGATTTGTGAAAGAACAAGTTAATCCCAAACAAGATTTCTGGACCACTAGTTAA

Protein Analysis

454

Amino Acids

51.44

Weight (kDa)

9.32

Isoelectric Point (pI)

41.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 7 - 418 2.5e-72 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 528
AccII CGCG 1 cut(s) 533
AciI CCGC 1 cut(s) 533
AclWI GGATC 7 cut(s) 34, 71, 84, 729, 1094, 1204, 1258
AcoI YGGCCR 1 cut(s) 475
AcsI RAATTY 5 cut(s) 86, 182, 685, 726, 1093
AfaI GTAC 4 cut(s) 68, 750, 803, 1161
AfiI CCNNNNNNNGG 2 cut(s) 47, 1295
AflII CTTAAG 1 cut(s) 296
AgsI TTSAA 5 cut(s) 127, 214, 365, 692, 830
AhlI ACTAGT 1 cut(s) 1355
AjnI CCWGG 4 cut(s) 22, 273, 562, 1171
AjuI GAANNNNNNNTTGG 6 cut(s) 572, 604, 653, 685, 1328, 1360
AleI CACNNNNGTG 1 cut(s) 276
Alw21I GWGCWC 1 cut(s) 317
Alw26I GTCTC 2 cut(s) 47, 327
AlwI GGATC 7 cut(s) 34, 71, 84, 729, 1094, 1204, 1258
AlwNI CAGNNNCTG 3 cut(s) 349, 569, 616
AoxI GGCC 7 cut(s) 38, 174, 250, 475, 840, 884, 1273
ApeKI GCWGC 4 cut(s) 291, 398, 401, 758
ApoI RAATTY 5 cut(s) 86, 182, 685, 726, 1093
AspS9I GGNCC 4 cut(s) 251, 1085, 1274, 1350
AsuHPI GGTGA 5 cut(s) 197, 205, 263, 290, 686
AsuNHI GCTAGC 1 cut(s) 1183
AvaII GGWCC 2 cut(s) 1085, 1350
AxyI CCTNAGG 1 cut(s) 171
BaeGI GKGCMC 1 cut(s) 901
BamHI GGATCC 1 cut(s) 76
BanII GRGCYC 1 cut(s) 317
Bbv12I GWGCWC 1 cut(s) 317
BbvCI CCTCAGC 1 cut(s) 1290
BbvI GCAGC 4 cut(s) 303, 385, 413, 745
BccI CCATC 5 cut(s) 30, 866, 946, 1111, 1221
BceAI ACGGC 1 cut(s) 1027
BciT130I CCWGG 4 cut(s) 24, 275, 564, 1173
BcoDI GTCTC 2 cut(s) 47, 327
BcuI ACTAGT 1 cut(s) 1355
BfaI CTAG 3 cut(s) 1107, 1184, 1356
BfmI CTRYAG 3 cut(s) 399, 656, 771
BfrI CTTAAG 1 cut(s) 296
BglII AGATCT 1 cut(s) 664
BisI GCNGC 4 cut(s) 292, 399, 402, 759
BlpI GCTNAGC 1 cut(s) 12
BlsI GCNGC 4 cut(s) 293, 400, 403, 760
BmcAI AGTACT 1 cut(s) 750
Bme1390I CCNGG 4 cut(s) 24, 275, 564, 1173
Bme18I GGWCC 2 cut(s) 1085, 1350
BmgT120I GGNCC 4 cut(s) 251, 1085, 1274, 1350
BmiI GGNNCC 2 cut(s) 78, 354
BmrFI CCNGG 4 cut(s) 24, 275, 564, 1173
BmsI GCATC 2 cut(s) 853, 1188
BmtI GCTAGC 1 cut(s) 1187
BplI GAGNNNNNCTC 2 cut(s) 489, 521
BpmI CTGGAG 1 cut(s) 1214
Bpu10I CCTNAGC 2 cut(s) 370, 1290
Bpu1102I GCTNAGC 1 cut(s) 12
BpuEI CTTGAG 3 cut(s) 491, 782, 967
BsaJI CCNNGG 3 cut(s) 22, 274, 384
Bsc4I CCNNNNNNNGG 2 cut(s) 47, 1295
Bse118I RCCGGY 1 cut(s) 477
Bse1I ACTGG 4 cut(s) 354, 777, 1197, 1283
Bse21I CCTNAGG 1 cut(s) 171
BseBI CCWGG 4 cut(s) 24, 275, 564, 1173
BseDI CCNNGG 3 cut(s) 22, 274, 384
BseGI GGATG 3 cut(s) 41, 490, 957
BseLI CCNNNNNNNGG 2 cut(s) 47, 1295
BseMII CTCAG 4 cut(s) 162, 608, 708, 1304
BseNI ACTGG 4 cut(s) 354, 777, 1197, 1283
BseSI GKGCMC 1 cut(s) 901
BseXI GCAGC 4 cut(s) 303, 385, 413, 745
Bsh1236I CGCG 1 cut(s) 533
BshFI GGCC 7 cut(s) 40, 176, 252, 477, 842, 886, 1275
BsiHKAI GWGCWC 1 cut(s) 317
BsiSI CCGG 2 cut(s) 405, 478
BslI CCNNNNNNNGG 2 cut(s) 47, 1295
BsmAI GTCTC 2 cut(s) 47, 327
BsmI GAATGC 1 cut(s) 822
BsnI GGCC 7 cut(s) 40, 176, 252, 477, 842, 886, 1275
Bsp1286I GDGCHC 2 cut(s) 317, 901
Bsp143I GATC 8 cut(s) 26, 76, 664, 676, 721, 1099, 1209, 1250
Bsp1720I GCTNAGC 1 cut(s) 12
BspACI CCGC 1 cut(s) 533
BspANI GGCC 7 cut(s) 40, 176, 252, 477, 842, 886, 1275
BspCNI CTCAG 4 cut(s) 163, 609, 709, 1303
BspFNI CGCG 1 cut(s) 533
BspHI TCATGA 1 cut(s) 427
BspLI GGNNCC 2 cut(s) 78, 354
BspMAI CTGCAG 2 cut(s) 403, 660
BspOI GCTAGC 1 cut(s) 1187
BspPI GGATC 7 cut(s) 34, 71, 84, 729, 1094, 1204, 1258
BspQI GCTCTTC 1 cut(s) 224
BspTI CTTAAG 1 cut(s) 296
BsrFI RCCGGY 1 cut(s) 477
BsrI ACTGG 4 cut(s) 354, 777, 1197, 1283
BssAI RCCGGY 1 cut(s) 477
BssECI CCNNGG 3 cut(s) 22, 274, 384
BssMI GATC 8 cut(s) 26, 76, 664, 676, 721, 1099, 1209, 1250
BssT1I CCWWGG 1 cut(s) 384
Bst2UI CCWGG 4 cut(s) 24, 275, 564, 1173
Bst4CI ACNGT 1 cut(s) 753
Bst6I CTCTTC 2 cut(s) 215, 224
BstAFI CTTAAG 1 cut(s) 296
BstC8I GCNNGC 3 cut(s) 166, 479, 1185
BstDEI CTNAG 7 cut(s) 12, 171, 370, 605, 617, 717, 1290
BstENI CCTNNNNNAGG 1 cut(s) 45
BstF5I GGATG 3 cut(s) 41, 490, 957
BstFNI CGCG 1 cut(s) 533
BstKTI GATC 8 cut(s) 29, 79, 667, 679, 724, 1102, 1212, 1253
BstMAI GTCTC 2 cut(s) 47, 327
BstMBI GATC 8 cut(s) 26, 76, 664, 676, 721, 1099, 1209, 1250
BstMWI GCNNNNNNNGC 4 cut(s) 380, 590, 839, 1127
BstNI CCWGG 4 cut(s) 24, 275, 564, 1173
BstNSI RCATGY 1 cut(s) 1166
BstSCI CCNGG 4 cut(s) 22, 273, 562, 1171
BstSFI CTRYAG 3 cut(s) 399, 656, 771
BstSLI GKGCMC 1 cut(s) 901
BstUI CGCG 1 cut(s) 533
BstV1I GCAGC 4 cut(s) 303, 385, 413, 745
BstX2I RGATCY 2 cut(s) 76, 664
BstXI CCANNNNNNTGG 3 cut(s) 140, 894, 1029
BstYI RGATCY 2 cut(s) 76, 664
Bsu36I CCTNAGG 1 cut(s) 171
BsuRI GGCC 7 cut(s) 40, 176, 252, 477, 842, 886, 1275
BtsCI GGATG 3 cut(s) 41, 490, 957
BtsI GCAGTG 1 cut(s) 567
BtsIMutI CAGTG 2 cut(s) 567, 784
Cac8I GCNNGC 3 cut(s) 166, 479, 1185
CaiI CAGNNNCTG 3 cut(s) 349, 569, 616
CciI TCATGA 1 cut(s) 427
Cfr10I RCCGGY 1 cut(s) 477
Cfr13I GGNCC 4 cut(s) 251, 1085, 1274, 1350
CseI GACGC 1 cut(s) 539
Csp6I GTAC 4 cut(s) 67, 749, 802, 1160
CspCI CAANNNNNGTGG 2 cut(s) 166, 201
CviAII CATG 9 cut(s) 157, 200, 393, 428, 789, 809, 1039, 1163, 1295
CviQI GTAC 4 cut(s) 67, 749, 802, 1160
DdeI CTNAG 7 cut(s) 12, 171, 370, 605, 617, 717, 1290
DpnI GATC 8 cut(s) 28, 78, 666, 678, 723, 1101, 1211, 1252
DpnII GATC 8 cut(s) 26, 76, 664, 676, 721, 1099, 1209, 1250
EaeI YGGCCR 1 cut(s) 475
Eam1104I CTCTTC 2 cut(s) 215, 224
EarI CTCTTC 2 cut(s) 215, 224
Ecl136II GAGCTC 1 cut(s) 315
Eco130I CCWWGG 1 cut(s) 384
Eco24I GRGCYC 1 cut(s) 317
Eco32I GATATC 1 cut(s) 1013
Eco47I GGWCC 2 cut(s) 1085, 1350
Eco53kI GAGCTC 1 cut(s) 315
Eco81I CCTNAGG 1 cut(s) 171
EcoICRI GAGCTC 1 cut(s) 315
EcoNI CCTNNNNNAGG 1 cut(s) 45
EcoRII CCWGG 4 cut(s) 22, 273, 562, 1171
EcoRV GATATC 1 cut(s) 1013
EcoT14I CCWWGG 1 cut(s) 384
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 317
ErhI CCWWGG 1 cut(s) 384
FaeI CATG 9 cut(s) 160, 203, 396, 431, 792, 812, 1042, 1166, 1298
FalI AAGNNNNNCTT 1 cut(s) 32
FatI CATG 9 cut(s) 156, 199, 392, 427, 788, 808, 1038, 1162, 1294
FauI CCCGC 1 cut(s) 526
FblI GTMKAC 1 cut(s) 528
Fnu4HI GCNGC 4 cut(s) 292, 399, 402, 759
FokI GGATG 3 cut(s) 48, 497, 964
FriOI GRGCYC 1 cut(s) 317
Fsp4HI GCNGC 4 cut(s) 292, 399, 402, 759
FspBI CTAG 3 cut(s) 1107, 1184, 1356
GluI GCNGC 4 cut(s) 292, 399, 402, 759
GsuI CTGGAG 1 cut(s) 1214
HaeIII GGCC 7 cut(s) 40, 176, 252, 477, 842, 886, 1275
HapII CCGG 2 cut(s) 405, 478
HgaI GACGC 1 cut(s) 539
Hin1II CATG 9 cut(s) 160, 203, 396, 431, 792, 812, 1042, 1166, 1298
HindIII AAGCTT 1 cut(s) 14
HinfI GANTC 6 cut(s) 55, 196, 389, 613, 793, 1264
HpaII CCGG 2 cut(s) 405, 478
HphI GGTGA 5 cut(s) 197, 205, 263, 290, 686
Hpy166II GTNNAC 1 cut(s) 529
Hpy188I TCNGA 6 cut(s) 312, 579, 612, 618, 733, 908
Hpy188III TCNNGA 6 cut(s) 356, 428, 508, 827, 1070, 1348
Hpy8I GTNNAC 1 cut(s) 529
HpyAV CCTTC 6 cut(s) 264, 433, 634, 832, 844, 1027
HpyCH4III ACNGT 1 cut(s) 753
HpyCH4V TGCA 8 cut(s) 4, 45, 343, 401, 572, 658, 866, 974
HpyF10VI GCNNNNNNNGC 4 cut(s) 380, 590, 839, 1127
HpyF3I CTNAG 7 cut(s) 12, 171, 370, 605, 617, 717, 1290
Hsp92II CATG 9 cut(s) 160, 203, 396, 431, 792, 812, 1042, 1166, 1298
KroI GCCGGC 1 cut(s) 477
KroNI GCCGGC 1 cut(s) 479
Kzo9I GATC 8 cut(s) 26, 76, 664, 676, 721, 1099, 1209, 1250
LguI GCTCTTC 1 cut(s) 224
LmnI GCTCC 1 cut(s) 1126
Lsp1109I GCAGC 4 cut(s) 303, 385, 413, 745
LweI GCATC 2 cut(s) 853, 1188
MaeI CTAG 3 cut(s) 1107, 1184, 1356
MaeIII GTNAC 3 cut(s) 193, 536, 1222
MalI GATC 8 cut(s) 28, 78, 666, 678, 723, 1101, 1211, 1252
MboI GATC 8 cut(s) 26, 76, 664, 676, 721, 1099, 1209, 1250
MboII GAAGA 4 cut(s) 202, 241, 448, 523
MflI RGATCY 2 cut(s) 76, 664
MhlI GDGCHC 2 cut(s) 317, 901
MluCI AATT 9 cut(s) 86, 182, 541, 627, 685, 726, 1073, 1093, 1228
MlyI GAGTC 2 cut(s) 49, 190
MmeI TCCRAC 2 cut(s) 575, 1010
Mph1103I ATGCAT 1 cut(s) 6
MroNI GCCGGC 1 cut(s) 477
MseI TTAA 5 cut(s) 297, 713, 785, 1329, 1360
MslI CAYNNNNRTG 1 cut(s) 276
MspCI CTTAAG 1 cut(s) 296
MspI CCGG 2 cut(s) 405, 478
MspR9I CCNGG 4 cut(s) 24, 275, 564, 1173
Mva1269I GAATGC 1 cut(s) 822
MvaI CCWGG 4 cut(s) 24, 275, 564, 1173
MvnI CGCG 1 cut(s) 533
MwoI GCNNNNNNNGC 4 cut(s) 380, 590, 839, 1127
NaeI GCCGGC 1 cut(s) 479
NdeII GATC 8 cut(s) 26, 76, 664, 676, 721, 1099, 1209, 1250
NgoMIV GCCGGC 1 cut(s) 477
NheI GCTAGC 1 cut(s) 1183
NlaIII CATG 9 cut(s) 160, 203, 396, 431, 792, 812, 1042, 1166, 1298
NlaIV GGNNCC 2 cut(s) 78, 354
NmeAIII GCCGAG 1 cut(s) 868
NmuCI GTSAC 2 cut(s) 193, 1222
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1166
OliI CACNNNNGTG 1 cut(s) 276
PagI TCATGA 1 cut(s) 427
PciSI GCTCTTC 1 cut(s) 224
PctI GAATGC 1 cut(s) 822
PdiI GCCGGC 1 cut(s) 479
PfeI GAWTC 4 cut(s) 389, 613, 793, 1264
PfoI TCCNGGA 1 cut(s) 1171
PkrI GCNGC 4 cut(s) 293, 400, 403, 760
PleI GAGTC 2 cut(s) 49, 190
PpsI GAGTC 2 cut(s) 49, 190
Psp124BI GAGCTC 1 cut(s) 317
Psp6I CCWGG 4 cut(s) 22, 273, 562, 1171
PspGI CCWGG 4 cut(s) 22, 273, 562, 1171
PspN4I GGNNCC 2 cut(s) 78, 354
PspPI GGNCC 4 cut(s) 251, 1085, 1274, 1350
PstI CTGCAG 2 cut(s) 403, 660
PstNI CAGNNNCTG 3 cut(s) 349, 569, 616
PsuI RGATCY 2 cut(s) 76, 664
RsaI GTAC 4 cut(s) 68, 750, 803, 1161
RsaNI GTAC 4 cut(s) 67, 749, 802, 1160
RseI CAYNNNNRTG 1 cut(s) 276
SacI GAGCTC 1 cut(s) 317
SapI GCTCTTC 1 cut(s) 224
SaqAI TTAA 5 cut(s) 297, 713, 785, 1329, 1360
SatI GCNGC 4 cut(s) 292, 399, 402, 759
Sau3AI GATC 8 cut(s) 26, 76, 664, 676, 721, 1099, 1209, 1250
Sau96I GGNCC 4 cut(s) 251, 1085, 1274, 1350
ScaI AGTACT 1 cut(s) 750
SchI GAGTC 2 cut(s) 49, 190
ScrFI CCNGG 4 cut(s) 24, 275, 564, 1173
SduI GDGCHC 2 cut(s) 317, 901
SfaNI GCATC 2 cut(s) 853, 1188
SfcI CTRYAG 3 cut(s) 399, 656, 771
SinI GGWCC 2 cut(s) 1085, 1350
SmiMI CAYNNNNRTG 1 cut(s) 276
SmlI CTYRAG 4 cut(s) 296, 506, 797, 946
SmoI CTYRAG 4 cut(s) 296, 506, 797, 946
SpeI ACTAGT 1 cut(s) 1355
Sse9I AATT 9 cut(s) 86, 182, 541, 627, 685, 726, 1073, 1093, 1228
SsiI CCGC 1 cut(s) 533
SspMI CTAG 3 cut(s) 1107, 1184, 1356
SstI GAGCTC 1 cut(s) 317
StyD4I CCNGG 4 cut(s) 22, 273, 562, 1171
StyI CCWWGG 1 cut(s) 384
TaaI ACNGT 1 cut(s) 753
TasI AATT 9 cut(s) 86, 182, 541, 627, 685, 726, 1073, 1093, 1228
TatI WGTACW 3 cut(s) 66, 748, 1159
TfiI GAWTC 4 cut(s) 389, 613, 793, 1264
Tru1I TTAA 5 cut(s) 297, 713, 785, 1329, 1360
Tru9I TTAA 5 cut(s) 297, 713, 785, 1329, 1360
TscAI CASTG 2 cut(s) 574, 784
TseFI GTSAC 2 cut(s) 193, 1222
TseI GCWGC 4 cut(s) 291, 398, 401, 758
Tsp45I GTSAC 2 cut(s) 193, 1222
TspDTI ATGAA 3 cut(s) 444, 449, 711
TspRI CASTG 2 cut(s) 574, 784
Vha464I CTTAAG 1 cut(s) 296
VpaK11BI GGWCC 2 cut(s) 1085, 1350
XagI CCTNNNNNAGG 1 cut(s) 45
XapI RAATTY 5 cut(s) 86, 182, 685, 726, 1093
XceI RCATGY 1 cut(s) 1166
XcmI CCANNNNNNNNNTGG 1 cut(s) 382
XmiI GTMKAC 1 cut(s) 528
XspI CTAG 3 cut(s) 1107, 1184, 1356
ZrmI AGTACT 1 cut(s) 750
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.