Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002224

Physical Location & Seq

Genomic Coordinates Forward (+)

11080054 .. 11084973

Gene Structure 4920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0128500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGAAGCTAGCTCCGACGACGACGACGCCGTTTTTTCTCTCCGTCTTCTCAATCATCATACTCTGGACGACGTCGTTTGCGTTCACGCCTCGGACTTTTCTTCAGCTCCAGAGCTCCGCCGTGAGCACCAATTACTTGACCGATAAGGAGCTCTGGTTCACTCAGACTCTCGATCACTTCTCGGCGTACGATCACCCCAAGTTCGAGCAGCGATATTATGAGCTCCTCGACTTCTTCAGACCATCCGACGGTCCGATTTTCCTCAAAATCTGTGGAGAATCGGCCTGCACAGGAATCTCCAACGATTACTTAACTGTTTTGGCTAAGAAGTTTGGCGCGGCTGTGGTCTCGCTCGAGCATCGTTACTATGGTAAGAGCTCTCCGTTTAAATCACACTCGACTGAGAATTTGAAGTACTTATCATCGAAGCAAGCGCTTTTCGATTTGGCTGCTTTTCGACAGTATTATCAGGAGTCGTTGAATTTGAAGCTGAATAAGACTAAGGGTGAGAATGCGTGGTTCGTATTCGGTGTGTCGTATCCAGGAGCTCTTAGTGCATGGTTTAGACTCAAGTTTCCTCATTTGACATGTGGAAGTCTTGCAAGTTCTGCAGTTGTTGAAGCTGTGTTTAACTACACTGAATTTGACCAGCAGATTGGTGAGTCTGCCGGTCCAGAATGTAAAGCTGCATTGCAAGAAACTAATCGTCTTGTTGAACAAAGGCTTGCAGCTAATGGAAAAGCAGTGCGGGGTTTGTTTGGTGCAACCCAGCTTGATATTGATGGTGATTTTATGTATTTTCTGGCGGATGCTGCTGTTATTGCGTTTCAATATGGAAATCCCGACAGACTGTGCTCCCCTCTTGTTCAAGCAAAGACTAATGGAGAGGATTTGGTTGAGGCATATGCCAAATATGTTAAAGAGTATTACCTTGGAAGTTTTGGTGTTGATGTCGAAACATACAATCAGAAACACTTGAAGAACACTGCTGTTACCGAGGGGAGTTCTGATCGTTTGTGGTGGTTCCAAGTTTGTACCGAAGTTGCCTATTTTCAGGTGGCACCTGCAAATGATAGCATCCGGTCTTCAAAAGTTGACACAAAATACCATTTGGACCTTTGCAAGAATGTCTTTGGAGAGGGCATCTATCCAGAGGTTGATGCGACAAATTTATATTATGGAGGCAAAAGAATTGCAGGTTCAAAAATAGTTTTCACAAATGGCTCACAGGATCCCTGGCGTCATGCATCCAAACAGACTTCATCTCCAGATATGCCTTCATACATCGTCACTTGCCATAATTGTGGCCATGGAACTGATTTGAGAGGATGTCCACAGGTTCCTTTAAGCCCCGAAGGTAATGCCGAGAACTGCAGCAACCCAGATGCAGTCCACAAAGTTAGACAACAAATTGTAGAACACATAGACCTGTGGCTGTCTGAATGCCTAGAGACTGATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008169 GO:0008173 GO:0008649 GO:0008757 GO:0009383 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016434 GO:0016740 GO:0016741 GO:0022613 GO:0031167 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070475 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F NusB

Protein Analysis

487

Amino Acids

54.59

Weight (kDa)

5.78

Isoelectric Point (pI)

35.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S28	PF05577	55 - 431	1.1e-74	Serine carboxypeptidase S28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002224)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19270 AT3G19270
fragaria_vesca	FvH4_2g06010 FvH4_2g34420
malus_domestica	MD02G1171600.v1.1 MD05G1081400.v1.1 MD08G1101400.v1.1 MD15G1082600.v1.1 MD15G1283400.v1.1
prunus_persica	Prupe.1G435300_v2.0.a1 Prupe.7G133800_v2.0.a1 Prupe.8G125800_v2.0.a1
pyrus_communis	pycom02g13830 pycom05g07510 pycom08g08190 pycom15g07740
rosa_chinensis	RchiOBHm_Chr2g0105591 RchiOBHm_Chr6g0257401 RchiOBHm_Chr6g0307951
rosa_laevigata	RLG00000010684 RLG00000014690 RLG00000017443
rosa_multiflora	Rmu_sc0000820.1_g000025 Rmu_sc0003252.1_g000022
rosa_roxburghii	Rroxscaffold_2G00138090 Rroxscaffold_7G00160740 Rroxscaffold_7G00208630
rosa_rugosa	Rorug02G0128400 Rorug02G0128500 Rorug05G0573200 Rorug06G0362000
rosa_samantha	Rh2AG180300 Rh2CG184500 Rh2DG186100 Rh6AG090500 Rh6AG471000 Rh6BG482000 Rh6CG078300 Rh6CG487400 Rh6DG074100 Rh6DG473500
rosa_wichuraiana	Rw6G007900 Rw6G041130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1072
AatII	GACGTC	1 cut(s)	74
Acc36I	ACCTGC	2 cut(s)	1072, 1187
AccB1I	GGYRCC	1 cut(s)	1060
AccII	CGCG	1 cut(s)	338
AciI	CCGC	4 cut(s)	117, 338, 748, 806
AclWI	GGATC	2 cut(s)	1226, 1239
AcoI	YGGCCR	1 cut(s)	1306
AcsI	RAATTY	4 cut(s)	406, 481, 641, 1168
AcuI	CTGAAG	2 cut(s)	86, 220
AcyI	GRCGYC	3 cut(s)	26, 71, 1240
AfaI	GTAC	3 cut(s)	188, 416, 1036
AfeI	AGCGCT	1 cut(s)	435
AfiI	CCNNNNNNNGG	1 cut(s)	248
AflIII	ACRYGT	1 cut(s)	587
AjnI	CCWGG	2 cut(s)	541, 1235
AloI	GAACNNNNNNTCC	2 cut(s)	140, 172
Alw21I	GWGCWC	7 cut(s)	116, 128, 153, 225, 380, 550, 857
Alw26I	GTCTC	2 cut(s)	352, 1445
AlwI	GGATC	2 cut(s)	1226, 1239
Ama87I	CYCGRG	1 cut(s)	353
Aor51HI	AGCGCT	1 cut(s)	435
AoxI	GGCC	2 cut(s)	282, 1306
ApeKI	GCWGC	6 cut(s)	208, 449, 686, 728, 812, 1374
ApoI	RAATTY	4 cut(s)	406, 481, 641, 1168
ArsI	GACNNNNNNTTYG	2 cut(s)	391, 423
AspLEI	GCGC	2 cut(s)	338, 436
AspS9I	GGNCC	3 cut(s)	251, 671, 1114
AsuHPI	GGTGA	4 cut(s)	185, 518, 671, 797
AsuNHI	GCTAGC	1 cut(s)	7
AvaI	CYCGRG	1 cut(s)	353
AvaII	GGWCC	3 cut(s)	251, 671, 1114
BalI	TGGCCA	1 cut(s)	1308
BamHI	GGATCC	1 cut(s)	1231
BanI	GGYRCC	1 cut(s)	1060
BanII	GRGCYC	5 cut(s)	116, 153, 225, 380, 550
BbsI	GAAGAC	2 cut(s)	37, 1077
Bbv12I	GWGCWC	7 cut(s)	116, 128, 153, 225, 380, 550, 857
BbvI	GCAGC	6 cut(s)	220, 436, 673, 740, 799, 1386
BccI	CCATC	2 cut(s)	250, 776
BceAI	ACGGC	2 cut(s)	13, 104
BcgI	CGANNNNNNTGC	4 cut(s)	431, 465, 1343, 1377
BciT130I	CCWGG	2 cut(s)	543, 1237
BciVI	GTATCC	1 cut(s)	549
BcoDI	GTCTC	2 cut(s)	352, 1445
BfaI	CTAG	2 cut(s)	8, 1448
BfmI	CTRYAG	2 cut(s)	609, 1372
BfoI	RGCGCY	1 cut(s)	437
BfuAI	ACCTGC	2 cut(s)	1072, 1187
BfuI	GTATCC	1 cut(s)	549
BisI	GCNGC	7 cut(s)	209, 339, 450, 687, 729, 813, 1375
BlsI	GCNGC	7 cut(s)	210, 340, 451, 688, 730, 814, 1376
BmcAI	AGTACT	1 cut(s)	416
Bme1390I	CCNGG	2 cut(s)	543, 1237
Bme18I	GGWCC	3 cut(s)	251, 671, 1114
BmeT110I	CYCGRG	1 cut(s)	353
BmgT120I	GGNCC	3 cut(s)	251, 671, 1114
BmiI	GGNNCC	4 cut(s)	1025, 1062, 1233, 1341
BmrFI	CCNGG	2 cut(s)	543, 1237
BmsI	GCATC	7 cut(s)	367, 799, 1086, 1150, 1152, 1256, 1375
BmtI	GCTAGC	1 cut(s)	11
BpiI	GAAGAC	2 cut(s)	37, 1077
BpmI	CTGGAG	2 cut(s)	92, 1251
BpuEI	CTTGAG	1 cut(s)	554
BsaHI	GRCGYC	3 cut(s)	26, 71, 1240
BsaI	GGTCTC	1 cut(s)	352
BsaJI	CCNNGG	5 cut(s)	89, 931, 996, 1235, 1309
BsaWI	WCCGGW	1 cut(s)	1080
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 1249, 1279
Bsc4I	CCNNNNNNNGG	1 cut(s)	248
Bse118I	RCCGGY	1 cut(s)	668
Bse3DI	GCAATG	1 cut(s)	689
BseBI	CCWGG	2 cut(s)	543, 1237
BseDI	CCNNGG	5 cut(s)	89, 931, 996, 1235, 1309
BseGI	GGATG	5 cut(s)	242, 814, 1077, 1247, 1334
BseLI	CCNNNNNNNGG	1 cut(s)	248
BseMI	GCAATG	1 cut(s)	689
BseMII	CTCAG	2 cut(s)	176, 393
BseRI	GAGGAG	1 cut(s)	215
BseXI	GCAGC	6 cut(s)	220, 436, 673, 740, 799, 1386
BseYI	CCCAGC	1 cut(s)	768
BsgI	GTGCAG	1 cut(s)	271
Bsh1236I	CGCG	1 cut(s)	338
BshFI	GGCC	2 cut(s)	284, 1308
BshNI	GGYRCC	1 cut(s)	1060
BsiHKAI	GWGCWC	7 cut(s)	116, 128, 153, 225, 380, 550, 857
BsiHKCI	CYCGRG	1 cut(s)	353
BsiSI	CCGG	2 cut(s)	669, 1081
BsiWI	CGTACG	1 cut(s)	186
BslI	CCNNNNNNNGG	1 cut(s)	248
BsmAI	GTCTC	2 cut(s)	352, 1445
BsmI	GAATGC	2 cut(s)	517, 1448
BsnI	GGCC	2 cut(s)	284, 1308
Bso31I	GGTCTC	1 cut(s)	352
BsoBI	CYCGRG	1 cut(s)	353
Bsp1286I	GDGCHC	7 cut(s)	116, 128, 153, 225, 380, 550, 857
Bsp143I	GATC	4 cut(s)	172, 190, 1009, 1231
Bsp19I	CCATGG	1 cut(s)	1309
BspACI	CCGC	4 cut(s)	117, 338, 748, 806
BspANI	GGCC	2 cut(s)	284, 1308
BspCNI	CTCAG	2 cut(s)	175, 394
BspFNI	CGCG	1 cut(s)	338
BspLI	GGNNCC	4 cut(s)	1025, 1062, 1233, 1341
BspMAI	CTGCAG	2 cut(s)	613, 1376
BspMI	ACCTGC	2 cut(s)	1072, 1187
BspOI	GCTAGC	1 cut(s)	11
BspPI	GGATC	2 cut(s)	1226, 1239
BspT107I	GGYRCC	1 cut(s)	1060
BspTNI	GGTCTC	1 cut(s)	352
BsrDI	GCAATG	1 cut(s)	689
BsrFI	RCCGGY	1 cut(s)	668
BssAI	RCCGGY	1 cut(s)	668
BssECI	CCNNGG	5 cut(s)	89, 931, 996, 1235, 1309
BssMI	GATC	4 cut(s)	172, 190, 1009, 1231
BssNI	GRCGYC	3 cut(s)	26, 71, 1240
BssT1I	CCWWGG	2 cut(s)	931, 1309
Bst2UI	CCWGG	2 cut(s)	543, 1237
Bst4CI	ACNGT	4 cut(s)	251, 316, 462, 852
BstACI	GRCGYC	3 cut(s)	26, 71, 1240
BstAPI	GCANNNNNTGC	1 cut(s)	608
BstC8I	GCNNGC	4 cut(s)	9, 286, 432, 726
BstDEI	CTNAG	5 cut(s)	162, 324, 402, 501, 551
BstDSI	CCRYGG	1 cut(s)	1309
BstF5I	GGATG	5 cut(s)	242, 814, 1077, 1247, 1334
BstFNI	CGCG	1 cut(s)	338
BstH2I	RGCGCY	1 cut(s)	437
BstHHI	GCGC	2 cut(s)	338, 436
BstKTI	GATC	4 cut(s)	175, 193, 1012, 1234
BstMAI	GTCTC	2 cut(s)	352, 1445
BstMBI	GATC	4 cut(s)	172, 190, 1009, 1231
BstMWI	GCNNNNNNNGC	4 cut(s)	554, 608, 812, 821
BstNI	CCWGG	2 cut(s)	543, 1237
BstNSI	RCATGY	1 cut(s)	591
BstSCI	CCNGG	2 cut(s)	541, 1235
BstSFI	CTRYAG	2 cut(s)	609, 1372
BstUI	CGCG	1 cut(s)	338
BstV1I	GCAGC	6 cut(s)	220, 436, 673, 740, 799, 1386
BstV2I	GAAGAC	2 cut(s)	37, 1077
BstX2I	RGATCY	1 cut(s)	1231
BstXI	CCANNNNNNTGG	2 cut(s)	656, 1304
BstYI	RGATCY	1 cut(s)	1231
BsuI	GTATCC	1 cut(s)	549
BsuRI	GGCC	2 cut(s)	284, 1308
BtgI	CCRYGG	1 cut(s)	1309
BtsCI	GGATG	5 cut(s)	242, 814, 1077, 1247, 1334
BtsI	GCAGTG	2 cut(s)	750, 984
BtsIMutI	CAGTG	3 cut(s)	636, 750, 984
BveI	ACCTGC	2 cut(s)	1072, 1187
Cac8I	GCNNGC	4 cut(s)	9, 286, 432, 726
CfoI	GCGC	2 cut(s)	338, 436
Cfr10I	RCCGGY	1 cut(s)	668
Cfr13I	GGNCC	3 cut(s)	251, 671, 1114
CpoI	CGGWCCG	1 cut(s)	251
CseI	GACGC	2 cut(s)	34, 1229
Csp6I	GTAC	3 cut(s)	187, 415, 1035
CspCI	CAANNNNNGTGG	2 cut(s)	253, 288
CspI	CGGWCCG	1 cut(s)	251
CviAII	CATG	4 cut(s)	558, 588, 1244, 1310
CviQI	GTAC	3 cut(s)	187, 415, 1035
DdeI	CTNAG	5 cut(s)	162, 324, 402, 501, 551
DpnI	GATC	4 cut(s)	174, 192, 1011, 1233
DpnII	GATC	4 cut(s)	172, 190, 1009, 1231
DraI	TTTAAA	1 cut(s)	388
EaeI	YGGCCR	1 cut(s)	1306
EciI	GGCGGA	2 cut(s)	106, 821
Ecl136II	GAGCTC	5 cut(s)	114, 151, 223, 378, 548
Eco130I	CCWWGG	2 cut(s)	931, 1309
Eco24I	GRGCYC	5 cut(s)	116, 153, 225, 380, 550
Eco31I	GGTCTC	1 cut(s)	352
Eco47I	GGWCC	3 cut(s)	251, 671, 1114
Eco47III	AGCGCT	1 cut(s)	435
Eco53kI	GAGCTC	5 cut(s)	114, 151, 223, 378, 548
Eco57I	CTGAAG	2 cut(s)	86, 220
Eco88I	CYCGRG	1 cut(s)	353
EcoICRI	GAGCTC	5 cut(s)	114, 151, 223, 378, 548
EcoRII	CCWGG	2 cut(s)	541, 1235
EcoT14I	CCWWGG	2 cut(s)	931, 1309
EcoT22I	ATGCAT	1 cut(s)	1249
EcoT38I	GRGCYC	5 cut(s)	116, 153, 225, 380, 550
ErhI	CCWWGG	2 cut(s)	931, 1309
FaeI	CATG	4 cut(s)	561, 591, 1247, 1313
FalI	AAGNNNNNCTT	2 cut(s)	1115, 1147
FatI	CATG	4 cut(s)	557, 587, 1243, 1309
FauI	CCCGC	1 cut(s)	741
FauNDI	CATATG	1 cut(s)	904
Fnu4HI	GCNGC	7 cut(s)	209, 339, 450, 687, 729, 813, 1375
FokI	GGATG	5 cut(s)	229, 821, 1064, 1234, 1341
FriOI	GRGCYC	5 cut(s)	116, 153, 225, 380, 550
Fsp4HI	GCNGC	7 cut(s)	209, 339, 450, 687, 729, 813, 1375
FspBI	CTAG	2 cut(s)	8, 1448
GlaI	GCGC	2 cut(s)	337, 435
GluI	GCNGC	7 cut(s)	209, 339, 450, 687, 729, 813, 1375
GsaI	CCCAGC	1 cut(s)	772
GsuI	CTGGAG	2 cut(s)	92, 1251
HaeII	RGCGCY	1 cut(s)	437
HaeIII	GGCC	2 cut(s)	284, 1308
HapII	CCGG	2 cut(s)	669, 1081
HgaI	GACGC	2 cut(s)	34, 1229
HhaI	GCGC	2 cut(s)	338, 436
Hin1I	GRCGYC	3 cut(s)	26, 71, 1240
Hin1II	CATG	4 cut(s)	561, 591, 1247, 1313
Hin6I	GCGC	2 cut(s)	336, 434
HinP1I	GCGC	2 cut(s)	336, 434
HincII	GTYRAC	1 cut(s)	1096
HindII	GTYRAC	1 cut(s)	1096
HinfI	GANTC	6 cut(s)	166, 278, 294, 473, 567, 662
HpaII	CCGG	2 cut(s)	669, 1081
HphI	GGTGA	4 cut(s)	185, 518, 671, 797
Hpy166II	GTNNAC	5 cut(s)	84, 159, 1096, 1334, 1393
Hpy188I	TCNGA	9 cut(s)	15, 93, 165, 239, 247, 255, 969, 1009, 1441
Hpy188III	TCNNGA	8 cut(s)	64, 109, 170, 470, 674, 842, 1151, 1268
Hpy8I	GTNNAC	5 cut(s)	84, 159, 1096, 1334, 1393
Hpy99I	CGWCG	7 cut(s)	19, 22, 25, 28, 73, 76, 251
HpyAV	CCTTC	2 cut(s)	1287, 1349
HpyCH4III	ACNGT	4 cut(s)	251, 316, 462, 852
HpyCH4IV	ACGT	1 cut(s)	71
HpyF10VI	GCNNNNNNNGC	4 cut(s)	554, 608, 812, 821
HpyF3I	CTNAG	5 cut(s)	162, 324, 402, 501, 551
HpySE526I	ACGT	1 cut(s)	71
Hsp92I	GRCGYC	3 cut(s)	26, 71, 1240
Hsp92II	CATG	4 cut(s)	561, 591, 1247, 1313
HspAI	GCGC	2 cut(s)	336, 434
Kzo9I	GATC	4 cut(s)	172, 190, 1009, 1231
LmnI	GCTCC	7 cut(s)	16, 111, 119, 148, 228, 545, 860
Lsp1109I	GCAGC	6 cut(s)	220, 436, 673, 740, 799, 1386
LweI	GCATC	7 cut(s)	367, 799, 1086, 1150, 1152, 1256, 1375
MaeI	CTAG	2 cut(s)	8, 1448
MaeII	ACGT	1 cut(s)	71
MaeIII	GTNAC	3 cut(s)	362, 991, 1288
MalI	GATC	4 cut(s)	174, 192, 1011, 1233
MboI	GATC	4 cut(s)	172, 190, 1009, 1231
MboII	GAAGA	5 cut(s)	37, 92, 226, 991, 1077
MflI	RGATCY	1 cut(s)	1231
MhlI	GDGCHC	7 cut(s)	116, 128, 153, 225, 380, 550, 857
MlsI	TGGCCA	1 cut(s)	1308
MluCI	AATT	8 cut(s)	130, 406, 481, 641, 1168, 1191, 1300, 1410
MluNI	TGGCCA	1 cut(s)	1308
MlyI	GAGTC	4 cut(s)	160, 482, 561, 671
MmeI	TCCRAC	3 cut(s)	38, 270, 324
Mox20I	TGGCCA	1 cut(s)	1308
Mph1103I	ATGCAT	1 cut(s)	1249
MscI	TGGCCA	1 cut(s)	1308
MseI	TTAA	5 cut(s)	311, 387, 630, 918, 1346
MslI	CAYNNNNRTG	1 cut(s)	1302
Msp20I	TGGCCA	1 cut(s)	1308
MspI	CCGG	2 cut(s)	669, 1081
MspR9I	CCNGG	2 cut(s)	543, 1237
Mva1269I	GAATGC	2 cut(s)	517, 1448
MvaI	CCWGG	2 cut(s)	543, 1237
MvnI	CGCG	1 cut(s)	338
MwoI	GCNNNNNNNGC	4 cut(s)	554, 608, 812, 821
NcoI	CCATGG	1 cut(s)	1309
NdeI	CATATG	1 cut(s)	904
NdeII	GATC	4 cut(s)	172, 190, 1009, 1231
NheI	GCTAGC	1 cut(s)	7
NlaIII	CATG	4 cut(s)	561, 591, 1247, 1313
NlaIV	GGNNCC	4 cut(s)	1025, 1062, 1233, 1341
NmeAIII	GCCGAG	2 cut(s)	161, 1390
NmuCI	GTSAC	1 cut(s)	1288
NsiI	ATGCAT	1 cut(s)	1249
NspI	RCATGY	1 cut(s)	591
PaeR7I	CTCGAG	1 cut(s)	353
PaqCI	CACCTGC	1 cut(s)	1072
PciI	ACATGT	1 cut(s)	587
PcsI	WCGNNNNNNNCGW	2 cut(s)	26, 77
PctI	GAATGC	2 cut(s)	517, 1448
PfeI	GAWTC	2 cut(s)	278, 294
Pfl23II	CGTACG	1 cut(s)	186
PflFI	GACNNNGTC	1 cut(s)	70
PfoI	TCCNGGA	1 cut(s)	541
PkrI	GCNGC	7 cut(s)	210, 340, 451, 688, 730, 814, 1376
PleI	GAGTC	4 cut(s)	160, 481, 561, 670
PpsI	GAGTC	4 cut(s)	160, 481, 561, 670
PscI	ACATGT	1 cut(s)	587
Psp124BI	GAGCTC	5 cut(s)	116, 153, 225, 380, 550
Psp6I	CCWGG	2 cut(s)	541, 1235
PspFI	CCCAGC	1 cut(s)	768
PspGI	CCWGG	2 cut(s)	541, 1235
PspLI	CGTACG	1 cut(s)	186
PspN4I	GGNNCC	4 cut(s)	1025, 1062, 1233, 1341
PspPI	GGNCC	3 cut(s)	251, 671, 1114
PspXI	VCTCGAGB	1 cut(s)	353
PstI	CTGCAG	2 cut(s)	613, 1376
PsuI	RGATCY	1 cut(s)	1231
PsyI	GACNNNGTC	1 cut(s)	70
RsaI	GTAC	3 cut(s)	188, 416, 1036
RsaNI	GTAC	3 cut(s)	187, 415, 1035
RseI	CAYNNNNRTG	1 cut(s)	1302
Rsr2I	CGGWCCG	1 cut(s)	251
RsrII	CGGWCCG	1 cut(s)	251
SacI	GAGCTC	5 cut(s)	116, 153, 225, 380, 550
SaqAI	TTAA	5 cut(s)	311, 387, 630, 918, 1346
SatI	GCNGC	7 cut(s)	209, 339, 450, 687, 729, 813, 1375
Sau3AI	GATC	4 cut(s)	172, 190, 1009, 1231
Sau96I	GGNCC	3 cut(s)	251, 671, 1114
ScaI	AGTACT	1 cut(s)	416
SchI	GAGTC	4 cut(s)	160, 482, 561, 671
ScrFI	CCNGG	2 cut(s)	543, 1237
SduI	GDGCHC	7 cut(s)	116, 128, 153, 225, 380, 550, 857
SfaNI	GCATC	7 cut(s)	367, 799, 1086, 1150, 1152, 1256, 1375
SfcI	CTRYAG	2 cut(s)	609, 1372
Sfr274I	CTCGAG	1 cut(s)	353
SinI	GGWCC	3 cut(s)	251, 671, 1114
SlaI	CTCGAG	1 cut(s)	353
SmiMI	CAYNNNNRTG	1 cut(s)	1302
SmlI	CTYRAG	2 cut(s)	353, 569
SmoI	CTYRAG	2 cut(s)	353, 569
Sse9I	AATT	8 cut(s)	130, 406, 481, 641, 1168, 1191, 1300, 1410
SsiI	CCGC	4 cut(s)	117, 338, 748, 806
SspMI	CTAG	2 cut(s)	8, 1448
SstI	GAGCTC	5 cut(s)	116, 153, 225, 380, 550
StyD4I	CCNGG	2 cut(s)	541, 1235
StyI	CCWWGG	2 cut(s)	931, 1309
TaaI	ACNGT	4 cut(s)	251, 316, 462, 852
TaiI	ACGT	1 cut(s)	74
TaqI	TCGA	9 cut(s)	171, 204, 228, 354, 398, 425, 441, 457, 954
TaqII	GACCGA	1 cut(s)	155
TasI	AATT	8 cut(s)	130, 406, 481, 641, 1168, 1191, 1300, 1410
TatI	WGTACW	1 cut(s)	414
TauI	GCSGC	1 cut(s)	341
TfiI	GAWTC	2 cut(s)	278, 294
Tru1I	TTAA	5 cut(s)	311, 387, 630, 918, 1346
Tru9I	TTAA	5 cut(s)	311, 387, 630, 918, 1346
TscAI	CASTG	3 cut(s)	643, 750, 991
TseFI	GTSAC	1 cut(s)	1288
TseI	GCWGC	6 cut(s)	208, 449, 686, 728, 812, 1374
Tsp45I	GTSAC	1 cut(s)	1288
TspDTI	ATGAA	3 cut(s)	17, 1251, 1269
TspGWI	ACGGA	2 cut(s)	31, 372
TspRI	CASTG	3 cut(s)	643, 750, 991
Tth111I	GACNNNGTC	1 cut(s)	70
VpaK11BI	GGWCC	3 cut(s)	251, 671, 1114
XapI	RAATTY	4 cut(s)	406, 481, 641, 1168
XceI	RCATGY	1 cut(s)	591
XhoI	CTCGAG	1 cut(s)	353
XspI	CTAG	2 cut(s)	8, 1448
ZraI	GACGTC	1 cut(s)	72
ZrmI	AGTACT	1 cut(s)	416
Zsp2I	ATGCAT	1 cut(s)	1249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.