RLG00000017443

Cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
16815661 .. 16818525
2865 bp
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UTR
Exon/CDS
Intron
RLM00000017443

Sequence Viewer

Length: 1407 bp
ATGGGATGGCCATATCTTGGAGAAACCCTGCAACTCTACTCTCAAAATCCAAATGTCTTCTTTGGCACTAGGCAGCAAAGGTATGGAGAGATTTTCAAGACCCATATTCTTGGGAGCCCTGGTGTGATGCTGTGTAGCCCAGAGGCTATCCGGTTTGTGTTGGTGACTCAGGCACATTTGTTTAAGCCAACATACCCTAAAAGTAAGGAAAAATTGATTGGCCCCTCGGCACTTTTCTTCCACCAAGATGACTACCATACTCAAATGAGAAGATTAGTCCAAGAATCACTGTCCTTGGATGCTATCAAGAACTTAGTCCCGGATATTGAAGCCATTTCCATTTCTACCTTGGACTCATGGTCTGGTGGGCAAATTGTCAACACGTTTTATGAATTGAAGAAGTTCACTTTTGATGTTGCTGCATTGTTTATCTTCGGTCGCCTGAACACTCACTACAAAGAACAGCTAAAGAAAAACTACTTCACTCTAGACAAAGGTTACAATTGTTTCCCTATAAACCTACCAGGCTCTTCATACAATAAGTCGGTCTTGGTAAGGCAAATAATGGATCCCATTCTCAATTATGTAGTGACTATTCTTAATACCATTAATGTAAATTCATCTTTGAAGGCAAGGAGAAGGCTAAGCTTAATTCTCGGTGAGATAATAAAGGAGAGAAAGGAAAATAAATTGGTCGAGAAAGATCTATTGGGAAGCTTGTTAAAGTTCAAGGATGAACAGGGTCAAACCTTAACACACAACCAGATCCTTGATAACATTATTGGGGTATTGTTTGCTGCTCAGGACACCACAGCTACTCTCCTGACTTGGATTCTCAAATACATGCACGATTACTCTGAACTTCTAGAAGCTATTCAGGTAGAACAGAAGGCAATTTTTGCAGCAAATGAGGGTCGAAACCAGTCACTCAGTTGGGCTCAAACTAGAAATATGCCCCTTACCAGTAGGGCTATAAAGGAGAGTTTGAGGATGGCAAGCATAATTTCTTTCACCTTCAGAGAAGCCGTTGAAGACGTTGAATATAAAGGATACTTGATCCGAAAGGGATGGAAGGTACTACCTTTGTTCCGGAACATTCATCACAATCCTGATTTTTTCAATGAACCCCATAATTTCAATCCATCAAGATTTGAGCTTGGAATAAGACCCAATACGTTCGTGCCATTTGGCAATGGAGTTCATACTTGTCCTGGAAATGAAGTTGCCAAGACTGAGATACTTATTTTCATCTACCACCTCGTTAACAAGTTCAGGTGGGAAGCAGCGGCGTCCGATGGTGGGATTCATTATGACCCATTTCCAGTACCTCAGCAAGGACTTCCGGCCAAATTTTGGAAAGAGTATTCCGGCAGCCAAGGAGCGCTGTATGATAAAAGAGGAAACTAG

Protein Analysis

469

Amino Acids

53.66

Weight (kDa)

9.08

Isoelectric Point (pI)

46.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 3 - 428 1.3e-64 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 17, 1353
AccIII TCCGGA 1 cut(s) 1089
AciI CCGC 1 cut(s) 1286
AclWI GGATC 4 cut(s) 563, 576, 760, 1051
AcoI YGGCCR 2 cut(s) 8, 1344
AcsI RAATTY 2 cut(s) 616, 1349
AcuI CTGAAG 1 cut(s) 1000
AcyI GRCGYC 1 cut(s) 1289
AfaI GTAC 2 cut(s) 1077, 1326
AfeI AGCGCT 1 cut(s) 1383
AfiI CCNNNNNNNGG 4 cut(s) 17, 1299, 1334, 1353
AflIII ACRYGT 1 cut(s) 381
AgsI TTSAA 9 cut(s) 97, 329, 397, 628, 730, 1031, 1040, 1120, 1138
AhdI GACNNNNNGTC 1 cut(s) 358
AjnI CCWGG 3 cut(s) 118, 523, 1210
AjuI GAANNNNNNNTTGG 4 cut(s) 201, 233, 692, 724
AluBI AGCT 6 cut(s) 466, 648, 717, 815, 872, 1156
AluI AGCT 6 cut(s) 466, 648, 717, 815, 872, 1156
AlwI GGATC 4 cut(s) 563, 576, 760, 1051
Aor13HI TCCGGA 1 cut(s) 1089
Aor51HI AGCGCT 1 cut(s) 1383
AoxI GGCC 3 cut(s) 8, 220, 1344
ApeKI GCWGC 6 cut(s) 73, 419, 797, 902, 1283, 1371
ApoI RAATTY 2 cut(s) 616, 1349
AseI ATTAAT 1 cut(s) 609
Asp700I GAANNNNTTC 2 cut(s) 401, 873
AspLEI GCGC 1 cut(s) 1384
AspS9I GGNCC 1 cut(s) 221
AsuC2I CCSGG 1 cut(s) 320
AsuHPI GGTGA 3 cut(s) 175, 671, 1003
BalI TGGCCA 1 cut(s) 10
BamHI GGATCC 1 cut(s) 568
BanII GRGCYC 2 cut(s) 119, 940
BbsI GAAGAC 2 cut(s) 49, 1038
BbvCI CCTCAGC 1 cut(s) 1329
BbvI GCAGC 6 cut(s) 85, 406, 784, 914, 1295, 1383
BccI CCATC 4 cut(s) 985, 1062, 1150, 1289
BceAI ACGGC 1 cut(s) 1010
BciT130I CCWGG 3 cut(s) 120, 525, 1212
BciVI GTATCC 1 cut(s) 1043
BcnI CCSGG 1 cut(s) 320
BfaI CTAG 5 cut(s) 69, 488, 866, 945, 1405
BfoI RGCGCY 1 cut(s) 1385
BfuI GTATCC 1 cut(s) 1043
BglII AGATCT 1 cut(s) 703
BisI GCNGC 7 cut(s) 74, 420, 798, 903, 1284, 1287, 1372
BlpI GCTNAGC 1 cut(s) 644
BlsI GCNGC 7 cut(s) 75, 421, 799, 904, 1285, 1288, 1373
Bme1390I CCNGG 4 cut(s) 120, 320, 525, 1212
BmeRI GACNNNNNGTC 1 cut(s) 358
BmgT120I GGNCC 1 cut(s) 221
BmiI GGNNCC 3 cut(s) 116, 223, 570
BmrFI CCNGG 4 cut(s) 120, 320, 525, 1212
BmsI GCATC 2 cut(s) 117, 289
BpiI GAAGAC 2 cut(s) 49, 1038
Bpu10I CCTNAGC 2 cut(s) 801, 1329
Bpu1102I GCTNAGC 1 cut(s) 644
BpuMI CCSGG 1 cut(s) 320
BsaHI GRCGYC 1 cut(s) 1289
BsaJI CCNNGG 5 cut(s) 118, 225, 294, 348, 1375
BsaWI WCCGGW 2 cut(s) 150, 1089
BsaXI ACNNNNNCTCC 2 cut(s) 106, 136
Bsc4I CCNNNNNNNGG 4 cut(s) 17, 1299, 1334, 1353
Bse1I ACTGG 3 cut(s) 922, 963, 1322
Bse3DI GCAATG 1 cut(s) 1198
BseAI TCCGGA 1 cut(s) 1089
BseBI CCWGG 3 cut(s) 120, 525, 1212
BseDI CCNNGG 5 cut(s) 118, 225, 294, 348, 1375
BseGI GGATG 5 cut(s) 11, 304, 739, 996, 1073
BseLI CCNNNNNNNGG 4 cut(s) 17, 1299, 1334, 1353
BseMI GCAATG 1 cut(s) 1198
BseMII CTCAG 5 cut(s) 182, 815, 943, 1224, 1343
BseNI ACTGG 3 cut(s) 922, 963, 1322
BseXI GCAGC 6 cut(s) 85, 406, 784, 914, 1295, 1383
Bsh1285I CGRYCG 1 cut(s) 439
BshFI GGCC 3 cut(s) 10, 222, 1346
BsiEI CGRYCG 1 cut(s) 439
BsiSI CCGG 5 cut(s) 151, 320, 1090, 1343, 1368
BslFI GGGAC 1 cut(s) 302
BslI CCNNNNNNNGG 4 cut(s) 17, 1299, 1334, 1353
BsmFI GGGAC 1 cut(s) 302
BsnI GGCC 3 cut(s) 10, 222, 1346
Bsp1286I GDGCHC 2 cut(s) 119, 940
Bsp13I TCCGGA 1 cut(s) 1089
Bsp143I GATC 4 cut(s) 568, 703, 765, 1056
Bsp1720I GCTNAGC 1 cut(s) 644
BspACI CCGC 1 cut(s) 1286
BspANI GGCC 3 cut(s) 10, 222, 1346
BspCNI CTCAG 5 cut(s) 181, 814, 942, 1225, 1342
BspEI TCCGGA 1 cut(s) 1089
BspLI GGNNCC 3 cut(s) 116, 223, 570
BspPI GGATC 4 cut(s) 563, 576, 760, 1051
BspQI GCTCTTC 1 cut(s) 535
BsrDI GCAATG 1 cut(s) 1198
BsrI ACTGG 3 cut(s) 922, 963, 1322
BssECI CCNNGG 5 cut(s) 118, 225, 294, 348, 1375
BssMI GATC 4 cut(s) 568, 703, 765, 1056
BssNI GRCGYC 1 cut(s) 1289
BssT1I CCWWGG 3 cut(s) 294, 348, 1375
Bst2UI CCWGG 3 cut(s) 120, 525, 1212
Bst4CI ACNGT 1 cut(s) 291
Bst6I CTCTTC 1 cut(s) 535
BstACI GRCGYC 1 cut(s) 1289
BstAPI GCANNNNNTGC 1 cut(s) 899
BstC8I GCNNGC 1 cut(s) 997
BstDEI CTNAG 7 cut(s) 168, 313, 644, 801, 929, 1233, 1329
BstENI CCTNNNNNAGG 1 cut(s) 1332
BstF5I GGATG 5 cut(s) 11, 304, 739, 996, 1073
BstH2I RGCGCY 1 cut(s) 1385
BstHHI GCGC 1 cut(s) 1384
BstKTI GATC 4 cut(s) 571, 706, 768, 1059
BstMBI GATC 4 cut(s) 568, 703, 765, 1056
BstMCI CGRYCG 1 cut(s) 439
BstMWI GCNNNNNNNGC 1 cut(s) 899
BstNI CCWGG 3 cut(s) 120, 525, 1212
BstNSI RCATGY 1 cut(s) 847
BstSCI CCNGG 4 cut(s) 118, 318, 523, 1210
BstV1I GCAGC 6 cut(s) 85, 406, 784, 914, 1295, 1383
BstV2I GAAGAC 2 cut(s) 49, 1038
BstX2I RGATCY 3 cut(s) 568, 703, 765
BstXI CCANNNNNNTGG 1 cut(s) 110
BstYI RGATCY 3 cut(s) 568, 703, 765
BsuI GTATCC 1 cut(s) 1043
BsuRI GGCC 3 cut(s) 10, 222, 1346
BtsCI GGATG 5 cut(s) 11, 304, 739, 996, 1073
BtsIMutI CAGTG 1 cut(s) 287
Cac8I GCNNGC 1 cut(s) 997
CfoI GCGC 1 cut(s) 1384
Cfr13I GGNCC 1 cut(s) 221
CseI GACGC 1 cut(s) 1278
Csp6I GTAC 2 cut(s) 1076, 1325
CviAII CATG 2 cut(s) 357, 844
CviQI GTAC 2 cut(s) 1076, 1325
DdeI CTNAG 7 cut(s) 168, 313, 644, 801, 929, 1233, 1329
DpnI GATC 4 cut(s) 570, 705, 767, 1058
DpnII GATC 4 cut(s) 568, 703, 765, 1056
DriI GACNNNNNGTC 1 cut(s) 358
EaeI YGGCCR 2 cut(s) 8, 1344
Eam1104I CTCTTC 1 cut(s) 535
Eam1105I GACNNNNNGTC 1 cut(s) 358
EarI CTCTTC 1 cut(s) 535
Eco130I CCWWGG 3 cut(s) 294, 348, 1375
Eco24I GRGCYC 2 cut(s) 119, 940
Eco47III AGCGCT 1 cut(s) 1383
Eco57I CTGAAG 1 cut(s) 1000
EcoNI CCTNNNNNAGG 1 cut(s) 1332
EcoRII CCWGG 3 cut(s) 118, 523, 1210
EcoT14I CCWWGG 3 cut(s) 294, 348, 1375
EcoT38I GRGCYC 2 cut(s) 119, 940
ErhI CCWWGG 3 cut(s) 294, 348, 1375
FaeI CATG 2 cut(s) 360, 847
FalI AAGNNNNNCTT 2 cut(s) 533, 565
FaqI GGGAC 1 cut(s) 302
FatI CATG 2 cut(s) 356, 843
Fnu4HI GCNGC 7 cut(s) 74, 420, 798, 903, 1284, 1287, 1372
FokI GGATG 5 cut(s) 18, 311, 746, 1003, 1080
FriOI GRGCYC 2 cut(s) 119, 940
Fsp4HI GCNGC 7 cut(s) 74, 420, 798, 903, 1284, 1287, 1372
FspBI CTAG 5 cut(s) 69, 488, 866, 945, 1405
GlaI GCGC 1 cut(s) 1383
GluI GCNGC 7 cut(s) 74, 420, 798, 903, 1284, 1287, 1372
HaeII RGCGCY 1 cut(s) 1385
HaeIII GGCC 3 cut(s) 10, 222, 1346
HapII CCGG 5 cut(s) 151, 320, 1090, 1343, 1368
HgaI GACGC 1 cut(s) 1278
HhaI GCGC 1 cut(s) 1384
Hin1I GRCGYC 1 cut(s) 1289
Hin1II CATG 2 cut(s) 360, 847
Hin6I GCGC 1 cut(s) 1382
HinP1I GCGC 1 cut(s) 1382
HincII GTYRAC 2 cut(s) 379, 1264
HindII GTYRAC 2 cut(s) 379, 1264
HindIII AAGCTT 2 cut(s) 646, 715
HinfI GANTC 5 cut(s) 166, 284, 353, 832, 1303
HpaI GTTAAC 1 cut(s) 1264
HpaII CCGG 5 cut(s) 151, 320, 1090, 1343, 1368
HphI GGTGA 3 cut(s) 175, 671, 1003
Hpy166II GTNNAC 3 cut(s) 379, 405, 1264
Hpy188I TCNGA 4 cut(s) 859, 1019, 1061, 1294
Hpy8I GTNNAC 3 cut(s) 379, 405, 1264
HpyAV CCTTC 5 cut(s) 622, 633, 883, 1024, 1066
HpyCH4III ACNGT 1 cut(s) 291
HpyCH4IV ACGT 3 cut(s) 383, 1035, 1175
HpyCH4V TGCA 4 cut(s) 31, 422, 847, 902
HpyF10VI GCNNNNNNNGC 1 cut(s) 899
HpyF3I CTNAG 7 cut(s) 168, 313, 644, 801, 929, 1233, 1329
HpySE526I ACGT 3 cut(s) 383, 1035, 1175
Hsp92I GRCGYC 1 cut(s) 1289
Hsp92II CATG 2 cut(s) 360, 847
HspAI GCGC 1 cut(s) 1382
Kpn2I TCCGGA 1 cut(s) 1089
KspAI GTTAAC 1 cut(s) 1264
Kzo9I GATC 4 cut(s) 568, 703, 765, 1056
LguI GCTCTTC 1 cut(s) 535
LmnI GCTCC 2 cut(s) 114, 1379
Lsp1109I GCAGC 6 cut(s) 85, 406, 784, 914, 1295, 1383
LweI GCATC 2 cut(s) 117, 289
MaeI CTAG 5 cut(s) 69, 488, 866, 945, 1405
MaeII ACGT 3 cut(s) 383, 1035, 1175
MaeIII GTNAC 4 cut(s) 163, 497, 589, 924
MalI GATC 4 cut(s) 570, 705, 767, 1058
MboI GATC 4 cut(s) 568, 703, 765, 1056
MboII GAAGA 7 cut(s) 49, 229, 282, 409, 424, 522, 1043
MfeI CAATTG 1 cut(s) 502
MflI RGATCY 3 cut(s) 568, 703, 765
MhlI GDGCHC 2 cut(s) 119, 940
MlsI TGGCCA 1 cut(s) 10
MluNI TGGCCA 1 cut(s) 10
MlyI GAGTC 2 cut(s) 160, 347
MnlI CCTC 7 cut(s) 136, 235, 904, 981, 1268, 1338, 1391
Mox20I TGGCCA 1 cut(s) 10
MroI TCCGGA 1 cut(s) 1089
MroXI GAANNNNTTC 2 cut(s) 401, 873
MscI TGGCCA 1 cut(s) 10
MseI TTAA 7 cut(s) 183, 600, 609, 650, 722, 752, 1263
MslI CAYNNNNRTG 1 cut(s) 246
Msp20I TGGCCA 1 cut(s) 10
MspA1I CMGCKG 1 cut(s) 1286
MspI CCGG 5 cut(s) 151, 320, 1090, 1343, 1368
MspR9I CCNGG 4 cut(s) 120, 320, 525, 1212
MunI CAATTG 1 cut(s) 502
MvaI CCWGG 3 cut(s) 120, 525, 1212
MwoI GCNNNNNNNGC 1 cut(s) 899
NciI CCSGG 1 cut(s) 320
NdeII GATC 4 cut(s) 568, 703, 765, 1056
NlaIII CATG 2 cut(s) 360, 847
NlaIV GGNNCC 3 cut(s) 116, 223, 570
NmeAIII GCCGAG 1 cut(s) 206
NmuCI GTSAC 3 cut(s) 163, 589, 924
NspI RCATGY 1 cut(s) 847
PciSI GCTCTTC 1 cut(s) 535
PdmI GAANNNNTTC 2 cut(s) 401, 873
PfeI GAWTC 3 cut(s) 284, 832, 1303
PflMI CCANNNNNTGG 2 cut(s) 17, 1353
PfoI TCCNGGA 2 cut(s) 318, 1210
PkrI GCNGC 7 cut(s) 75, 421, 799, 904, 1285, 1288, 1373
PleI GAGTC 2 cut(s) 160, 347
PpsI GAGTC 2 cut(s) 160, 347
PshBI ATTAAT 1 cut(s) 609
Psp6I CCWGG 3 cut(s) 118, 523, 1210
PspGI CCWGG 3 cut(s) 118, 523, 1210
PspN4I GGNNCC 3 cut(s) 116, 223, 570
PspPI GGNCC 1 cut(s) 221
PsrI GAACNNNNNNTAC 2 cut(s) 437, 469
PsuI RGATCY 3 cut(s) 568, 703, 765
RsaI GTAC 2 cut(s) 1077, 1326
RsaNI GTAC 2 cut(s) 1076, 1325
RseI CAYNNNNRTG 1 cut(s) 246
SapI GCTCTTC 1 cut(s) 535
SaqAI TTAA 7 cut(s) 183, 600, 609, 650, 722, 752, 1263
SatI GCNGC 7 cut(s) 74, 420, 798, 903, 1284, 1287, 1372
Sau3AI GATC 4 cut(s) 568, 703, 765, 1056
Sau96I GGNCC 1 cut(s) 221
SchI GAGTC 2 cut(s) 160, 347
ScrFI CCNGG 4 cut(s) 120, 320, 525, 1212
SduI GDGCHC 2 cut(s) 119, 940
SfaNI GCATC 2 cut(s) 117, 289
SmiMI CAYNNNNRTG 1 cut(s) 246
SsiI CCGC 1 cut(s) 1286
SspMI CTAG 5 cut(s) 69, 488, 866, 945, 1405
StyD4I CCNGG 4 cut(s) 118, 318, 523, 1210
StyI CCWWGG 3 cut(s) 294, 348, 1375
TaaI ACNGT 1 cut(s) 291
TaiI ACGT 3 cut(s) 386, 1038, 1178
TaqI TCGA 2 cut(s) 696, 916
TaqII GACCGA 2 cut(s) 425, 535
TauI GCSGC 1 cut(s) 1289
TfiI GAWTC 3 cut(s) 284, 832, 1303
Tru1I TTAA 7 cut(s) 183, 600, 609, 650, 722, 752, 1263
Tru9I TTAA 7 cut(s) 183, 600, 609, 650, 722, 752, 1263
TscAI CASTG 1 cut(s) 294
TseFI GTSAC 3 cut(s) 163, 589, 924
TseI GCWGC 6 cut(s) 73, 419, 797, 902, 1283, 1371
Tsp45I GTSAC 3 cut(s) 163, 589, 924
TspRI CASTG 1 cut(s) 294
Van91I CCANNNNNTGG 2 cut(s) 17, 1353
VspI ATTAAT 1 cut(s) 609
XagI CCTNNNNNAGG 1 cut(s) 1332
XapI RAATTY 2 cut(s) 616, 1349
XbaI TCTAGA 2 cut(s) 487, 865
XceI RCATGY 1 cut(s) 847
XcmI CCANNNNNNNNNTGG 1 cut(s) 346
XmnI GAANNNNTTC 2 cut(s) 401, 873
XspI CTAG 5 cut(s) 69, 488, 866, 945, 1405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.