Rw6G007900

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
13187979 .. 13190708
2730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G007900.1

Sequence Viewer

Length: 1431 bp
ATGGAGAAAAGTGCTTCTACTCTGATTTTCATATGTATATTTCTCTCAACTCTGTTCTTATACCGCTGCATAAAGAAACAAAAGAGAAAATCTATGCATAAAGCTAAGCTTCCCCCAGGATCAATGGGATGGCCTTGCATAGGAGAGACTCTACAAATGTACTCTATGGACCCAAACAAATTCTTTGCCACAAAGCAGAAAAGGTATGGAGAGATATTCAAAACCCACATACTTGGCTGTCCTTGTGTCATGTTGGCAAGCCCTGAGGCCACAAAGTTTGTGCTGGTGACTCATGCTCACCTCTTCAAGCCCACATACCCGAAGAGCAAGGAGAAGCTGATTGGCCCTTCTGCTTTGTTCTTTCACCAGGGAGATTACCACAGCAGCCTTAAGAAACTCATTCAGAGCTCTCTGTCTCCAAACCCCAATACTATGCAGAAACTGGTACCTGACATTGAAGCCTTAGCCATTTCTGCCTTGGAATCATGGGCTGCAGCCGGAACTGTCATCAACACCTATCATGAAATGAAGAAGTTCGTGTTTGATGTCGGTTTTCTTGCCATTTTTGGCCGGCTGGATGATAGTTATAGAGAGAAGCTCAAGGAGAACTACCACATCGTAGACGCGGGTTACAATTCTTTTCCAACAAATATACCAGGCACTGCATATCAGAAAGCTCTCTTGGCGAGGAAAAGGCTTAGTCAGATTCTGAGGCAGATAATTTGTGAGAGGAAGGAAAAGAAAATACTGCAGAAAGATCTCTTGGGTGATCTGCTGAATTTTCAAAATGAAAAGGGGCAAAACTTAACTGAGGATCAAATTTCCGATAACATCATTGGAGTACTGTTTGCTGCCCAAGACACTACAGCCAGTGTTTTAACATGGATTCTCAAGTACCTCCATGACAACCAAAACATTCTTGAAGCTGTGAAGGCCGAGCAGAAGGCAATATATAATGCAAATGATGGGTATAAGAGGCCGTTGATTTGGGCACAAATCAGAAATATGCCACTTACACATAGAGTTATATTAGAGAGCTTGAGGATGGCAAGTATTATTTCTTTCGCATTTAGGGAAGCTGTGGTTGATGTAGAATACAAAGGATATCTCATACCAAAGGGTTGGAAGGTGATGCCGTTGTTTAGGAACATACATCACAATCCTGAATTGTTCTCTGGTCCTCAAAATTTTGATCCATCTAGGTTTGAGGTTGCTCCAAAGGCTTATACTTTCATACCATTTGGGAAAGGAGTACATGCTTGTCCTGGAAATGAGCTAGCCAAACTGGAGATGCTCATTTTGATCCATCATCTTGTGACTAATTTCAGGTGGGAAGTAGTGGGATCACAAAAAGGGATTCAGTATGGCCCATTTCCAGTTCCTCAGCATGGACTACCGGCCAGATTTGTGAAAGAACAAGTTAATCCCTAA

Protein Analysis

476

Amino Acids

54.2

Weight (kDa)

9.44

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 38 - 448 3e-73 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 445
AccB1I GGYRCC 1 cut(s) 445
AccI GTMKAC 1 cut(s) 621
AccII CGCG 1 cut(s) 626
AciI CCGC 2 cut(s) 64, 626
AclWI GGATC 5 cut(s) 127, 822, 1187, 1297, 1351
AcoI YGGCCR 2 cut(s) 568, 1398
AcsI RAATTY 4 cut(s) 179, 778, 819, 1186
AfaI GTAC 5 cut(s) 161, 447, 843, 896, 1254
AfiI CCNNNNNNNGG 2 cut(s) 140, 1388
AflII CTTAAG 1 cut(s) 389
AgsI TTSAA 5 cut(s) 220, 307, 458, 785, 923
AjnI CCWGG 4 cut(s) 115, 366, 655, 1264
AjuI GAANNNNNNNTTGG 4 cut(s) 665, 697, 746, 778
Alw21I GWGCWC 1 cut(s) 410
Alw26I GTCTC 2 cut(s) 140, 420
AlwI GGATC 5 cut(s) 127, 822, 1187, 1297, 1351
AlwNI CAGNNNCTG 3 cut(s) 442, 662, 709
AoxI GGCC 8 cut(s) 131, 267, 343, 568, 933, 977, 1366, 1398
ApeKI GCWGC 5 cut(s) 66, 384, 491, 494, 851
ApoI RAATTY 4 cut(s) 179, 778, 819, 1186
Asp700I GAANNNNTTC 1 cut(s) 533
Asp718I GGTACC 1 cut(s) 445
AspS9I GGNCC 4 cut(s) 169, 344, 1178, 1367
AsuHPI GGTGA 5 cut(s) 290, 298, 356, 779, 1141
AsuNHI GCTAGC 1 cut(s) 1276
AvaII GGWCC 2 cut(s) 169, 1178
AxyI CCTNAGG 1 cut(s) 264
BaeGI GKGCMC 1 cut(s) 994
BanI GGYRCC 1 cut(s) 445
BanII GRGCYC 1 cut(s) 410
Bbv12I GWGCWC 1 cut(s) 410
BbvCI CCTCAGC 1 cut(s) 1383
BbvI GCAGC 5 cut(s) 53, 396, 478, 506, 838
BccI CCATC 5 cut(s) 123, 959, 1039, 1204, 1314
BceAI ACGGC 2 cut(s) 964, 1120
BciT130I CCWGG 4 cut(s) 117, 368, 657, 1266
BcoDI GTCTC 2 cut(s) 140, 420
BfaI CTAG 2 cut(s) 1200, 1277
BfmI CTRYAG 3 cut(s) 492, 749, 864
BfrI CTTAAG 1 cut(s) 389
BglII AGATCT 1 cut(s) 757
BisI GCNGC 5 cut(s) 67, 385, 492, 495, 852
BlpI GCTNAGC 1 cut(s) 105
BlsI GCNGC 5 cut(s) 68, 386, 493, 496, 853
BmcAI AGTACT 1 cut(s) 843
Bme1390I CCNGG 4 cut(s) 117, 368, 657, 1266
Bme18I GGWCC 2 cut(s) 169, 1178
BmgT120I GGNCC 4 cut(s) 169, 344, 1178, 1367
BmiI GGNNCC 2 cut(s) 171, 447
BmrFI CCNGG 4 cut(s) 117, 368, 657, 1266
BmsI GCATC 2 cut(s) 1122, 1281
BmtI GCTAGC 1 cut(s) 1280
BplI GAGNNNNNCTC 2 cut(s) 582, 614
BpmI CTGGAG 1 cut(s) 1307
Bpu10I CCTNAGC 2 cut(s) 463, 1383
Bpu1102I GCTNAGC 1 cut(s) 105
BpuEI CTTGAG 3 cut(s) 584, 875, 1060
BsaJI CCNNGG 3 cut(s) 115, 367, 477
Bsc4I CCNNNNNNNGG 2 cut(s) 140, 1388
Bse118I RCCGGY 2 cut(s) 570, 1396
Bse1I ACTGG 4 cut(s) 447, 870, 1290, 1376
Bse21I CCTNAGG 1 cut(s) 264
BseBI CCWGG 4 cut(s) 117, 368, 657, 1266
BseDI CCNNGG 3 cut(s) 115, 367, 477
BseGI GGATG 3 cut(s) 134, 583, 1050
BseLI CCNNNNNNNGG 2 cut(s) 140, 1388
BseMII CTCAG 4 cut(s) 255, 701, 801, 1397
BseNI ACTGG 4 cut(s) 447, 870, 1290, 1376
BseSI GKGCMC 1 cut(s) 994
BseXI GCAGC 5 cut(s) 53, 396, 478, 506, 838
Bsh1236I CGCG 1 cut(s) 626
BshFI GGCC 8 cut(s) 133, 269, 345, 570, 935, 979, 1368, 1400
BshNI GGYRCC 1 cut(s) 445
BsiHKAI GWGCWC 1 cut(s) 410
BsiSI CCGG 3 cut(s) 498, 571, 1397
BslI CCNNNNNNNGG 2 cut(s) 140, 1388
BsmAI GTCTC 2 cut(s) 140, 420
BsnI GGCC 8 cut(s) 133, 269, 345, 570, 935, 979, 1368, 1400
Bsp1286I GDGCHC 2 cut(s) 410, 994
Bsp143I GATC 7 cut(s) 119, 757, 769, 814, 1192, 1302, 1343
Bsp1720I GCTNAGC 1 cut(s) 105
BspACI CCGC 2 cut(s) 64, 626
BspANI GGCC 8 cut(s) 133, 269, 345, 570, 935, 979, 1368, 1400
BspCNI CTCAG 4 cut(s) 256, 702, 802, 1396
BspFNI CGCG 1 cut(s) 626
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 2 cut(s) 171, 447
BspMAI CTGCAG 2 cut(s) 496, 753
BspOI GCTAGC 1 cut(s) 1280
BspPI GGATC 5 cut(s) 127, 822, 1187, 1297, 1351
BspQI GCTCTTC 1 cut(s) 317
BspT107I GGYRCC 1 cut(s) 445
BspTI CTTAAG 1 cut(s) 389
BsrFI RCCGGY 2 cut(s) 570, 1396
BsrI ACTGG 4 cut(s) 447, 870, 1290, 1376
BssAI RCCGGY 2 cut(s) 570, 1396
BssECI CCNNGG 3 cut(s) 115, 367, 477
BssMI GATC 7 cut(s) 119, 757, 769, 814, 1192, 1302, 1343
BssT1I CCWWGG 1 cut(s) 477
Bst2UI CCWGG 4 cut(s) 117, 368, 657, 1266
Bst4CI ACNGT 2 cut(s) 505, 846
Bst6I CTCTTC 2 cut(s) 308, 317
BstAFI CTTAAG 1 cut(s) 389
BstC8I GCNNGC 3 cut(s) 259, 572, 1278
BstDEI CTNAG 7 cut(s) 105, 264, 463, 698, 710, 810, 1383
BstENI CCTNNNNNAGG 1 cut(s) 138
BstF5I GGATG 3 cut(s) 134, 583, 1050
BstFNI CGCG 1 cut(s) 626
BstKTI GATC 7 cut(s) 122, 760, 772, 817, 1195, 1305, 1346
BstMAI GTCTC 2 cut(s) 140, 420
BstMBI GATC 7 cut(s) 119, 757, 769, 814, 1192, 1302, 1343
BstMWI GCNNNNNNNGC 4 cut(s) 473, 683, 932, 1220
BstNI CCWGG 4 cut(s) 117, 368, 657, 1266
BstNSI RCATGY 1 cut(s) 1259
BstSCI CCNGG 4 cut(s) 115, 366, 655, 1264
BstSFI CTRYAG 3 cut(s) 492, 749, 864
BstSLI GKGCMC 1 cut(s) 994
BstUI CGCG 1 cut(s) 626
BstV1I GCAGC 5 cut(s) 53, 396, 478, 506, 838
BstX2I RGATCY 1 cut(s) 757
BstXI CCANNNNNNTGG 2 cut(s) 233, 1122
BstYI RGATCY 1 cut(s) 757
Bsu36I CCTNAGG 1 cut(s) 264
BsuRI GGCC 8 cut(s) 133, 269, 345, 570, 935, 979, 1368, 1400
BtsCI GGATG 3 cut(s) 134, 583, 1050
BtsI GCAGTG 1 cut(s) 660
BtsIMutI CAGTG 2 cut(s) 660, 877
Cac8I GCNNGC 3 cut(s) 259, 572, 1278
CaiI CAGNNNCTG 3 cut(s) 442, 662, 709
CciI TCATGA 1 cut(s) 520
Cfr10I RCCGGY 2 cut(s) 570, 1396
Cfr13I GGNCC 4 cut(s) 169, 344, 1178, 1367
CseI GACGC 1 cut(s) 632
Csp6I GTAC 5 cut(s) 160, 446, 842, 895, 1253
CspCI CAANNNNNGTGG 2 cut(s) 259, 294
CviAII CATG 8 cut(s) 250, 293, 486, 521, 882, 902, 1256, 1388
CviQI GTAC 5 cut(s) 160, 446, 842, 895, 1253
DdeI CTNAG 7 cut(s) 105, 264, 463, 698, 710, 810, 1383
DpnI GATC 7 cut(s) 121, 759, 771, 816, 1194, 1304, 1345
DpnII GATC 7 cut(s) 119, 757, 769, 814, 1192, 1302, 1343
EaeI YGGCCR 2 cut(s) 568, 1398
Eam1104I CTCTTC 2 cut(s) 308, 317
EarI CTCTTC 2 cut(s) 308, 317
Ecl136II GAGCTC 1 cut(s) 408
Eco130I CCWWGG 1 cut(s) 477
Eco24I GRGCYC 1 cut(s) 410
Eco32I GATATC 1 cut(s) 1106
Eco47I GGWCC 2 cut(s) 169, 1178
Eco53kI GAGCTC 1 cut(s) 408
Eco81I CCTNAGG 1 cut(s) 264
EcoICRI GAGCTC 1 cut(s) 408
EcoNI CCTNNNNNAGG 1 cut(s) 138
EcoRII CCWGG 4 cut(s) 115, 366, 655, 1264
EcoRV GATATC 1 cut(s) 1106
EcoT14I CCWWGG 1 cut(s) 477
EcoT22I ATGCAT 1 cut(s) 99
EcoT38I GRGCYC 1 cut(s) 410
ErhI CCWWGG 1 cut(s) 477
FaeI CATG 8 cut(s) 253, 296, 489, 524, 885, 905, 1259, 1391
FalI AAGNNNNNCTT 2 cut(s) 93, 125
FatI CATG 8 cut(s) 249, 292, 485, 520, 881, 901, 1255, 1387
FauI CCCGC 1 cut(s) 619
FauNDI CATATG 1 cut(s) 32
FblI GTMKAC 1 cut(s) 621
Fnu4HI GCNGC 5 cut(s) 67, 385, 492, 495, 852
FokI GGATG 3 cut(s) 141, 590, 1057
FriOI GRGCYC 1 cut(s) 410
Fsp4HI GCNGC 5 cut(s) 67, 385, 492, 495, 852
FspBI CTAG 2 cut(s) 1200, 1277
GluI GCNGC 5 cut(s) 67, 385, 492, 495, 852
GsuI CTGGAG 1 cut(s) 1307
HaeIII GGCC 8 cut(s) 133, 269, 345, 570, 935, 979, 1368, 1400
HapII CCGG 3 cut(s) 498, 571, 1397
HgaI GACGC 1 cut(s) 632
Hin1II CATG 8 cut(s) 253, 296, 489, 524, 885, 905, 1259, 1391
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 6 cut(s) 148, 289, 482, 706, 886, 1357
HpaII CCGG 3 cut(s) 498, 571, 1397
HphI GGTGA 5 cut(s) 290, 298, 356, 779, 1141
Hpy166II GTNNAC 1 cut(s) 622
Hpy188I TCNGA 7 cut(s) 24, 405, 672, 705, 711, 826, 1001
Hpy188III TCNNGA 3 cut(s) 521, 920, 1163
Hpy8I GTNNAC 1 cut(s) 622
HpyAV CCTTC 5 cut(s) 357, 727, 925, 937, 1120
HpyCH4III ACNGT 2 cut(s) 505, 846
HpyCH4V TGCA 8 cut(s) 69, 97, 138, 436, 494, 665, 751, 959
HpyF10VI GCNNNNNNNGC 4 cut(s) 473, 683, 932, 1220
HpyF3I CTNAG 7 cut(s) 105, 264, 463, 698, 710, 810, 1383
Hsp92II CATG 8 cut(s) 253, 296, 489, 524, 885, 905, 1259, 1391
KpnI GGTACC 1 cut(s) 449
KroI GCCGGC 1 cut(s) 570
KroNI GCCGGC 1 cut(s) 572
Kzo9I GATC 7 cut(s) 119, 757, 769, 814, 1192, 1302, 1343
LguI GCTCTTC 1 cut(s) 317
LmnI GCTCC 1 cut(s) 1219
Lsp1109I GCAGC 5 cut(s) 53, 396, 478, 506, 838
LweI GCATC 2 cut(s) 1122, 1281
MaeI CTAG 2 cut(s) 1200, 1277
MaeIII GTNAC 3 cut(s) 286, 629, 1315
MalI GATC 7 cut(s) 121, 759, 771, 816, 1194, 1304, 1345
MboI GATC 7 cut(s) 119, 757, 769, 814, 1192, 1302, 1343
MboII GAAGA 3 cut(s) 295, 334, 541
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 2 cut(s) 410, 994
MluCI AATT 8 cut(s) 179, 634, 720, 778, 819, 1166, 1186, 1321
MlyI GAGTC 2 cut(s) 142, 283
MmeI TCCRAC 2 cut(s) 668, 1103
Mph1103I ATGCAT 1 cut(s) 99
MroNI GCCGGC 1 cut(s) 570
MroXI GAANNNNTTC 1 cut(s) 533
MseI TTAA 4 cut(s) 390, 806, 878, 1422
MspA1I CMGCKG 1 cut(s) 66
MspCI CTTAAG 1 cut(s) 389
MspI CCGG 3 cut(s) 498, 571, 1397
MspR9I CCNGG 4 cut(s) 117, 368, 657, 1266
MvaI CCWGG 4 cut(s) 117, 368, 657, 1266
MvnI CGCG 1 cut(s) 626
MwoI GCNNNNNNNGC 4 cut(s) 473, 683, 932, 1220
NaeI GCCGGC 1 cut(s) 572
NdeI CATATG 1 cut(s) 32
NdeII GATC 7 cut(s) 119, 757, 769, 814, 1192, 1302, 1343
NgoMIV GCCGGC 1 cut(s) 570
NheI GCTAGC 1 cut(s) 1276
NlaIII CATG 8 cut(s) 253, 296, 489, 524, 885, 905, 1259, 1391
NlaIV GGNNCC 2 cut(s) 171, 447
NmeAIII GCCGAG 1 cut(s) 961
NmuCI GTSAC 2 cut(s) 286, 1315
NsiI ATGCAT 1 cut(s) 99
NspI RCATGY 1 cut(s) 1259
PagI TCATGA 1 cut(s) 520
PciSI GCTCTTC 1 cut(s) 317
PdiI GCCGGC 1 cut(s) 572
PdmI GAANNNNTTC 1 cut(s) 533
PfeI GAWTC 4 cut(s) 482, 706, 886, 1357
PfoI TCCNGGA 1 cut(s) 1264
PkrI GCNGC 5 cut(s) 68, 386, 493, 496, 853
PleI GAGTC 2 cut(s) 142, 283
PpsI GAGTC 2 cut(s) 142, 283
Psp124BI GAGCTC 1 cut(s) 410
Psp6I CCWGG 4 cut(s) 115, 366, 655, 1264
PspGI CCWGG 4 cut(s) 115, 366, 655, 1264
PspN4I GGNNCC 2 cut(s) 171, 447
PspPI GGNCC 4 cut(s) 169, 344, 1178, 1367
PstI CTGCAG 2 cut(s) 496, 753
PstNI CAGNNNCTG 3 cut(s) 442, 662, 709
PsuI RGATCY 1 cut(s) 757
RsaI GTAC 5 cut(s) 161, 447, 843, 896, 1254
RsaNI GTAC 5 cut(s) 160, 446, 842, 895, 1253
SacI GAGCTC 1 cut(s) 410
SapI GCTCTTC 1 cut(s) 317
SaqAI TTAA 4 cut(s) 390, 806, 878, 1422
SatI GCNGC 5 cut(s) 67, 385, 492, 495, 852
Sau3AI GATC 7 cut(s) 119, 757, 769, 814, 1192, 1302, 1343
Sau96I GGNCC 4 cut(s) 169, 344, 1178, 1367
ScaI AGTACT 1 cut(s) 843
SchI GAGTC 2 cut(s) 142, 283
ScrFI CCNGG 4 cut(s) 117, 368, 657, 1266
SduI GDGCHC 2 cut(s) 410, 994
SfaNI GCATC 2 cut(s) 1122, 1281
SfcI CTRYAG 3 cut(s) 492, 749, 864
SinI GGWCC 2 cut(s) 169, 1178
SmlI CTYRAG 4 cut(s) 389, 599, 890, 1039
SmoI CTYRAG 4 cut(s) 389, 599, 890, 1039
Sse9I AATT 8 cut(s) 179, 634, 720, 778, 819, 1166, 1186, 1321
SsiI CCGC 2 cut(s) 64, 626
SspMI CTAG 2 cut(s) 1200, 1277
SstI GAGCTC 1 cut(s) 410
StyD4I CCNGG 4 cut(s) 115, 366, 655, 1264
StyI CCWWGG 1 cut(s) 477
TaaI ACNGT 2 cut(s) 505, 846
TasI AATT 8 cut(s) 179, 634, 720, 778, 819, 1166, 1186, 1321
TatI WGTACW 3 cut(s) 159, 841, 1252
TfiI GAWTC 4 cut(s) 482, 706, 886, 1357
Tru1I TTAA 4 cut(s) 390, 806, 878, 1422
Tru9I TTAA 4 cut(s) 390, 806, 878, 1422
TscAI CASTG 2 cut(s) 667, 877
TseFI GTSAC 2 cut(s) 286, 1315
TseI GCWGC 5 cut(s) 66, 384, 491, 494, 851
Tsp45I GTSAC 2 cut(s) 286, 1315
TspDTI ATGAA 5 cut(s) 19, 537, 542, 804, 1222
TspRI CASTG 2 cut(s) 667, 877
Vha464I CTTAAG 1 cut(s) 389
VpaK11BI GGWCC 2 cut(s) 169, 1178
XagI CCTNNNNNAGG 1 cut(s) 138
XapI RAATTY 4 cut(s) 179, 778, 819, 1186
XceI RCATGY 1 cut(s) 1259
XcmI CCANNNNNNNNNTGG 1 cut(s) 475
XmiI GTMKAC 1 cut(s) 621
XmnI GAANNNNTTC 1 cut(s) 533
XspI CTAG 2 cut(s) 1200, 1277
ZrmI AGTACT 1 cut(s) 843
Zsp2I ATGCAT 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.