MD08G1101400.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
8538915 .. 8542334
3420 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1101400.v1.1.491

Sequence Viewer

Length: 1419 bp
ATGGATGCAATTTTGACCTACGTTTTCATCCTTCTCTGCACCCTTCTGTCATTTGTATTTTTCATGAAAAGGGACAGGAGAGGAGGAGAAGCACCCCAGAAAAGGGCTCAGCTCCCTCCAGGTTCATTAGGTTGGCCTTATATAGGAGAGACCCTTCAGCTCTATTCTCAAAACCCAAATACTTTCTTTTCTTCCAAACAGAAAAGGTACGGAGAGATTTTCAAGACGCATATTCTGGGATGTCCAAGTGTCATGCTGGCGAGCCCTGAGGCCGCGAAGTTTGTGTTGGTGACTCAAGCTCACTTGTTCAAGCCCACGTATCCCAAAAGCAAAGAGCGTTTGCTTGGTCCGTCTGCACTGTTTTATCACCAAGGAGATTACCATATGCGGATGAGGAAATTAGTTCAAGGATCTCTCTCCCTTGATATTATTCGAAATTTGGTGCCTCATATTGAAGGCTTCGCTGTTTCTGCCACAGACTCCTGGGCCACTGGCCAAGTCATCGACACCTTCCATGAAATGAAGAAGTTATCTTTCGAGGTTGGTAAACTTGCAATTTTTGGCAATTTGGAGGCACATTACAAAGAAGAGCTCAAGAGGAATTACACCATTGTGGACAGAGGCTACAATTCATTCCCCACAATCATTCCGGGCACACCATACAAAAAGGCTTTGTTGGCAAGGAAAAGGCTAAGAGTAATTCTGGGTGATATTATATGTGAGAGGAGGGAGAAAAGATTACCTGGGAAAGATCTTTTGGATTGCATGTTGAACTCAAAAGATGAAAAGGGTGAAGTCTTAACGGATGACCAAATTGCTGACAACATTTTGGGGGTGCTTTTTGCTGCTCAAGACACTACAGCTAGTGTGATGACCTGGATTGTCAAGTACCTCCTCGATGACCCCAAACTTTTAGAGTCTGTAAAGGCTGAGCAGAAGCTTATTCGTGAAGCAAATGAAGAAGGCCAGCAACCATTGAGCTGGGCACAGACTAGAAACATGCCAGTTAGTCACAAGGTTATTTTAGAGAGTTTGAGAATGGCAACCATTATATCTTTTGCTTTTAGAGAGGCTGTGGTTGATGTGGAATACAAAGGGTACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCAGGAACATTCATCACAATCCTGAATTTTTTGCCGACCCTCAGAAATTCGATCTCTCTAGATTCGAGGTTGCACCAAAGCCAAATACATTTATGCCATTTGGAAGTGGAGTGCATGCCTGTCCCGGAAACGAGCTTGCAAAGCTGGAAATGCTGGTTATGATGCACCATTTGGTCACCAAGTTGAAGTGGGAAGTAGTGGGATCCCAAAGTGAGATTCAATATAGCCCATTCCCTGTGCCTCTGCATGGACTCCCAGCAAAATTTTGGAAACAATCTGCCTGA

Protein Analysis

473

Amino Acids

53.75

Weight (kDa)

9.19

Isoelectric Point (pI)

46.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 39 - 449 2.4e-69 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 442
AccII CGCG 1 cut(s) 275
AciI CCGC 2 cut(s) 273, 388
AclWI GGATC 3 cut(s) 418, 1332, 1345
AcoI YGGCCR 1 cut(s) 493
AcsI RAATTY 4 cut(s) 436, 1160, 1181, 1397
AcuI CTGAAG 1 cut(s) 140
AfaI GTAC 3 cut(s) 209, 890, 1100
AfiI CCNNNNNNNGG 4 cut(s) 102, 103, 143, 1382
AgsI TTSAA 7 cut(s) 223, 310, 407, 455, 772, 1321, 1355
AjnI CCWGG 4 cut(s) 118, 482, 742, 875
AjuI GAANNNNNNNTTGG 6 cut(s) 269, 301, 740, 772, 1335, 1367
AleI CACNNNNGTG 1 cut(s) 611
AluBI AGCT 9 cut(s) 112, 160, 299, 592, 863, 940, 981, 1270, 1279
AluI AGCT 9 cut(s) 112, 160, 299, 592, 863, 940, 981, 1270, 1279
Alw21I GWGCWC 1 cut(s) 594
Alw26I GTCTC 1 cut(s) 143
AlwI GGATC 3 cut(s) 418, 1332, 1345
AoxI GGCC 5 cut(s) 134, 270, 486, 493, 964
ApeKI GCWGC 1 cut(s) 845
ApoI RAATTY 4 cut(s) 436, 1160, 1181, 1397
AspS9I GGNCC 2 cut(s) 347, 486
AsuC2I CCSGG 2 cut(s) 651, 1260
AsuHPI GGTGA 5 cut(s) 301, 359, 719, 803, 1303
AsuII TTCGAA 1 cut(s) 433
AvaII GGWCC 1 cut(s) 347
AxyI CCTNAGG 1 cut(s) 267
BaeGI GKGCMC 2 cut(s) 656, 988
BalI TGGCCA 1 cut(s) 495
BamHI GGATCC 1 cut(s) 1337
BanI GGYRCC 1 cut(s) 442
BanII GRGCYC 3 cut(s) 109, 266, 594
Bbv12I GWGCWC 1 cut(s) 594
BbvI GCAGC 1 cut(s) 832
BciT130I CCWGG 4 cut(s) 120, 484, 744, 877
BciVI GTATCC 1 cut(s) 330
BcnI CCSGG 2 cut(s) 651, 1260
BcoDI GTCTC 1 cut(s) 143
BfaI CTAG 3 cut(s) 864, 993, 1194
BfmI CTRYAG 1 cut(s) 858
BfuI GTATCC 1 cut(s) 330
BglII AGATCT 1 cut(s) 751
BisI GCNGC 2 cut(s) 273, 846
BlpI GCTNAGC 2 cut(s) 108, 930
BlsI GCNGC 2 cut(s) 274, 847
Bme1390I CCNGG 6 cut(s) 120, 484, 651, 744, 877, 1260
Bme18I GGWCC 1 cut(s) 347
BmgT120I GGNCC 2 cut(s) 347, 486
BmiI GGNNCC 2 cut(s) 444, 1339
BmrFI CCNGG 6 cut(s) 120, 484, 651, 744, 877, 1260
BmsI GCATC 2 cut(s) 1116, 1287
BpmI CTGGAG 1 cut(s) 102
Bpu1102I GCTNAGC 2 cut(s) 108, 930
Bpu14I TTCGAA 1 cut(s) 433
BpuEI CTTGAG 3 cut(s) 279, 578, 834
BpuMI CCSGG 2 cut(s) 651, 1260
BsaAI YACGTR 1 cut(s) 318
BsaI GGTCTC 1 cut(s) 143
BsaJI CCNNGG 3 cut(s) 370, 483, 743
Bsc4I CCNNNNNNNGG 4 cut(s) 102, 103, 143, 1382
Bse1I ACTGG 2 cut(s) 496, 1004
Bse21I CCTNAGG 1 cut(s) 267
BseBI CCWGG 4 cut(s) 120, 484, 744, 877
BseDI CCNNGG 3 cut(s) 370, 483, 743
BseGI GGATG 5 cut(s) 10, 27, 245, 396, 811
BseLI CCNNNNNNNGG 4 cut(s) 102, 103, 143, 1382
BseMII CTCAG 4 cut(s) 122, 258, 921, 1190
BseNI ACTGG 2 cut(s) 496, 1004
BseRI GAGGAG 4 cut(s) 96, 99, 739, 884
BseSI GKGCMC 2 cut(s) 656, 988
BseXI GCAGC 1 cut(s) 832
BseYI CCCAGC 2 cut(s) 981, 1390
BsgI GTGCAG 2 cut(s) 22, 339
Bsh1236I CGCG 1 cut(s) 275
BshFI GGCC 5 cut(s) 136, 272, 488, 495, 966
BshNI GGYRCC 1 cut(s) 442
BsiHKAI GWGCWC 1 cut(s) 594
BsiSI CCGG 2 cut(s) 650, 1260
BslFI GGGAC 2 cut(s) 86, 1242
BslI CCNNNNNNNGG 4 cut(s) 102, 103, 143, 1382
BsmAI GTCTC 1 cut(s) 143
BsmFI GGGAC 2 cut(s) 86, 1242
BsnI GGCC 5 cut(s) 136, 272, 488, 495, 966
Bso31I GGTCTC 1 cut(s) 143
Bsp119I TTCGAA 1 cut(s) 433
Bsp1286I GDGCHC 5 cut(s) 109, 266, 594, 656, 988
Bsp143I GATC 4 cut(s) 410, 751, 1186, 1337
Bsp1720I GCTNAGC 2 cut(s) 108, 930
BspACI CCGC 2 cut(s) 273, 388
BspANI GGCC 5 cut(s) 136, 272, 488, 495, 966
BspCNI CTCAG 4 cut(s) 121, 259, 922, 1189
BspFNI CGCG 1 cut(s) 275
BspHI TCATGA 1 cut(s) 63
BspLI GGNNCC 2 cut(s) 444, 1339
BspPI GGATC 3 cut(s) 418, 1332, 1345
BspQI GCTCTTC 1 cut(s) 582
BspT104I TTCGAA 1 cut(s) 433
BspT107I GGYRCC 1 cut(s) 442
BspTNI GGTCTC 1 cut(s) 143
BsrI ACTGG 2 cut(s) 496, 1004
BssECI CCNNGG 3 cut(s) 370, 483, 743
BssMI GATC 4 cut(s) 410, 751, 1186, 1337
BssT1I CCWWGG 1 cut(s) 370
Bst2UI CCWGG 4 cut(s) 120, 484, 744, 877
Bst4CI ACNGT 1 cut(s) 360
Bst6I CTCTTC 1 cut(s) 582
BstBAI YACGTR 1 cut(s) 318
BstBI TTCGAA 1 cut(s) 433
BstC8I GCNNGC 5 cut(s) 258, 262, 968, 1251, 1272
BstDEI CTNAG 5 cut(s) 108, 267, 692, 930, 1176
BstEII GGTNACC 1 cut(s) 1309
BstENI CCTNNNNNAGG 1 cut(s) 141
BstF5I GGATG 5 cut(s) 10, 27, 245, 396, 811
BstFNI CGCG 1 cut(s) 275
BstKTI GATC 4 cut(s) 413, 754, 1189, 1340
BstMAI GTCTC 1 cut(s) 143
BstMBI GATC 4 cut(s) 410, 751, 1186, 1337
BstMWI GCNNNNNNNGC 4 cut(s) 470, 677, 1276, 1285
BstNI CCWGG 4 cut(s) 120, 484, 744, 877
BstNSI RCATGY 3 cut(s) 769, 1003, 1253
BstPI GGTNACC 1 cut(s) 1309
BstSCI CCNGG 6 cut(s) 118, 482, 649, 742, 875, 1258
BstSFI CTRYAG 1 cut(s) 858
BstSLI GKGCMC 2 cut(s) 656, 988
BstUI CGCG 1 cut(s) 275
BstV1I GCAGC 1 cut(s) 832
BstX2I RGATCY 3 cut(s) 410, 751, 1337
BstXI CCANNNNNNTGG 2 cut(s) 981, 1116
BstYI RGATCY 3 cut(s) 410, 751, 1337
Bsu36I CCTNAGG 1 cut(s) 267
BsuI GTATCC 1 cut(s) 330
BsuRI GGCC 5 cut(s) 136, 272, 488, 495, 966
BtsCI GGATG 5 cut(s) 10, 27, 245, 396, 811
BtsIMutI CAGTG 2 cut(s) 356, 489
Cac8I GCNNGC 5 cut(s) 258, 262, 968, 1251, 1272
CciI TCATGA 1 cut(s) 63
Cfr13I GGNCC 2 cut(s) 347, 486
CseI GACGC 1 cut(s) 235
Csp6I GTAC 3 cut(s) 208, 889, 1099
CviAII CATG 7 cut(s) 64, 253, 515, 766, 1000, 1250, 1382
CviQI GTAC 3 cut(s) 208, 889, 1099
DdeI CTNAG 5 cut(s) 108, 267, 692, 930, 1176
DpnI GATC 4 cut(s) 412, 753, 1188, 1339
DpnII GATC 4 cut(s) 410, 751, 1186, 1337
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 1 cut(s) 582
EarI CTCTTC 1 cut(s) 582
Ecl136II GAGCTC 1 cut(s) 592
Eco130I CCWWGG 1 cut(s) 370
Eco24I GRGCYC 3 cut(s) 109, 266, 594
Eco31I GGTCTC 1 cut(s) 143
Eco47I GGWCC 1 cut(s) 347
Eco53kI GAGCTC 1 cut(s) 592
Eco57I CTGAAG 1 cut(s) 140
Eco81I CCTNAGG 1 cut(s) 267
Eco91I GGTNACC 1 cut(s) 1309
EcoICRI GAGCTC 1 cut(s) 592
EcoNI CCTNNNNNAGG 1 cut(s) 141
EcoO65I GGTNACC 1 cut(s) 1309
EcoRII CCWGG 4 cut(s) 118, 482, 742, 875
EcoT14I CCWWGG 1 cut(s) 370
EcoT38I GRGCYC 3 cut(s) 109, 266, 594
ErhI CCWWGG 1 cut(s) 370
FaeI CATG 7 cut(s) 67, 256, 518, 769, 1003, 1253, 1385
FaqI GGGAC 2 cut(s) 86, 1242
FatI CATG 7 cut(s) 63, 252, 514, 765, 999, 1249, 1381
FauNDI CATATG 1 cut(s) 384
Fnu4HI GCNGC 2 cut(s) 273, 846
FokI GGATG 5 cut(s) 14, 17, 252, 403, 818
FriOI GRGCYC 3 cut(s) 109, 266, 594
Fsp4HI GCNGC 2 cut(s) 273, 846
FspBI CTAG 3 cut(s) 864, 993, 1194
GluI GCNGC 2 cut(s) 273, 846
GsaI CCCAGC 2 cut(s) 985, 1394
GsuI CTGGAG 1 cut(s) 102
HaeIII GGCC 5 cut(s) 136, 272, 488, 495, 966
HapII CCGG 2 cut(s) 650, 1260
HgaI GACGC 1 cut(s) 235
Hin1II CATG 7 cut(s) 67, 256, 518, 769, 1003, 1253, 1385
HindIII AAGCTT 1 cut(s) 938
HinfI GANTC 7 cut(s) 292, 479, 917, 1105, 1197, 1351, 1386
HpaII CCGG 2 cut(s) 650, 1260
HphI GGTGA 5 cut(s) 301, 359, 719, 803, 1303
Hpy166II GTNNAC 2 cut(s) 548, 616
Hpy188I TCNGA 1 cut(s) 1179
Hpy188III TCNNGA 8 cut(s) 64, 223, 595, 851, 947, 1138, 1157, 1194
Hpy8I GTNNAC 2 cut(s) 548, 616
HpyAV CCTTC 6 cut(s) 41, 53, 164, 449, 520, 956
HpyCH4III ACNGT 1 cut(s) 360
HpyCH4IV ACGT 2 cut(s) 21, 317
HpyF10VI GCNNNNNNNGC 4 cut(s) 470, 677, 1276, 1285
HpyF3I CTNAG 5 cut(s) 108, 267, 692, 930, 1176
HpySE526I ACGT 2 cut(s) 21, 317
Hsp92II CATG 7 cut(s) 67, 256, 518, 769, 1003, 1253, 1385
Kzo9I GATC 4 cut(s) 410, 751, 1186, 1337
LguI GCTCTTC 1 cut(s) 582
LmnI GCTCC 1 cut(s) 117
Lsp1109I GCAGC 1 cut(s) 832
LweI GCATC 2 cut(s) 1116, 1287
MaeI CTAG 3 cut(s) 864, 993, 1194
MaeII ACGT 2 cut(s) 21, 317
MaeIII GTNAC 3 cut(s) 289, 1010, 1309
MalI GATC 4 cut(s) 412, 753, 1188, 1339
MboI GATC 4 cut(s) 410, 751, 1186, 1337
MboII GAAGA 4 cut(s) 183, 535, 599, 971
MflI RGATCY 3 cut(s) 410, 751, 1337
MhlI GDGCHC 5 cut(s) 109, 266, 594, 656, 988
MlsI TGGCCA 1 cut(s) 495
MluNI TGGCCA 1 cut(s) 495
MlyI GAGTC 4 cut(s) 286, 473, 926, 1380
MmeI TCCRAC 1 cut(s) 1097
Mox20I TGGCCA 1 cut(s) 495
MscI TGGCCA 1 cut(s) 495
MseI TTAA 1 cut(s) 800
MslI CAYNNNNRTG 1 cut(s) 611
Msp20I TGGCCA 1 cut(s) 495
MspI CCGG 2 cut(s) 650, 1260
MspR9I CCNGG 6 cut(s) 120, 484, 651, 744, 877, 1260
MvaI CCWGG 4 cut(s) 120, 484, 744, 877
MvnI CGCG 1 cut(s) 275
MwoI GCNNNNNNNGC 4 cut(s) 470, 677, 1276, 1285
NciI CCSGG 2 cut(s) 651, 1260
NdeI CATATG 1 cut(s) 384
NdeII GATC 4 cut(s) 410, 751, 1186, 1337
NlaIII CATG 7 cut(s) 67, 256, 518, 769, 1003, 1253, 1385
NlaIV GGNNCC 2 cut(s) 444, 1339
NmuCI GTSAC 3 cut(s) 289, 1010, 1309
NspI RCATGY 3 cut(s) 769, 1003, 1253
NspV TTCGAA 1 cut(s) 433
OliI CACNNNNGTG 1 cut(s) 611
PaeI GCATGC 1 cut(s) 1253
PagI TCATGA 1 cut(s) 63
PciSI GCTCTTC 1 cut(s) 582
PfeI GAWTC 3 cut(s) 1105, 1197, 1351
PfoI TCCNGGA 1 cut(s) 1258
PkrI GCNGC 2 cut(s) 274, 847
PleI GAGTC 4 cut(s) 286, 473, 925, 1380
PpsI GAGTC 4 cut(s) 286, 473, 925, 1380
Ppu21I YACGTR 1 cut(s) 318
Psp124BI GAGCTC 1 cut(s) 594
Psp6I CCWGG 4 cut(s) 118, 482, 742, 875
PspEI GGTNACC 1 cut(s) 1309
PspFI CCCAGC 2 cut(s) 981, 1390
PspGI CCWGG 4 cut(s) 118, 482, 742, 875
PspN4I GGNNCC 2 cut(s) 444, 1339
PspPI GGNCC 2 cut(s) 347, 486
PsuI RGATCY 3 cut(s) 410, 751, 1337
RsaI GTAC 3 cut(s) 209, 890, 1100
RsaNI GTAC 3 cut(s) 208, 889, 1099
RseI CAYNNNNRTG 1 cut(s) 611
SacI GAGCTC 1 cut(s) 594
SapI GCTCTTC 1 cut(s) 582
SaqAI TTAA 1 cut(s) 800
SatI GCNGC 2 cut(s) 273, 846
Sau3AI GATC 4 cut(s) 410, 751, 1186, 1337
Sau96I GGNCC 2 cut(s) 347, 486
SchI GAGTC 4 cut(s) 286, 473, 926, 1380
ScrFI CCNGG 6 cut(s) 120, 484, 651, 744, 877, 1260
SduI GDGCHC 5 cut(s) 109, 266, 594, 656, 988
SfaNI GCATC 2 cut(s) 1116, 1287
SfcI CTRYAG 1 cut(s) 858
SfuI TTCGAA 1 cut(s) 433
SinI GGWCC 1 cut(s) 347
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 3 cut(s) 294, 593, 849
SmoI CTYRAG 3 cut(s) 294, 593, 849
SphI GCATGC 1 cut(s) 1253
SsiI CCGC 2 cut(s) 273, 388
SspMI CTAG 3 cut(s) 864, 993, 1194
SstI GAGCTC 1 cut(s) 594
StyD4I CCNGG 6 cut(s) 118, 482, 649, 742, 875, 1258
StyI CCWWGG 1 cut(s) 370
TaaI ACNGT 1 cut(s) 360
TaiI ACGT 2 cut(s) 24, 320
TaqI TCGA 6 cut(s) 433, 504, 537, 897, 1185, 1200
TauI GCSGC 1 cut(s) 275
TfiI GAWTC 3 cut(s) 1105, 1197, 1351
Tru1I TTAA 1 cut(s) 800
Tru9I TTAA 1 cut(s) 800
TscAI CASTG 2 cut(s) 363, 496
TseFI GTSAC 3 cut(s) 289, 1010, 1309
TseI GCWGC 1 cut(s) 845
Tsp45I GTSAC 3 cut(s) 289, 1010, 1309
TspGWI ACGGA 3 cut(s) 225, 339, 818
TspRI CASTG 2 cut(s) 363, 496
VpaK11BI GGWCC 1 cut(s) 347
XagI CCTNNNNNAGG 1 cut(s) 141
XapI RAATTY 4 cut(s) 436, 1160, 1181, 1397
XbaI TCTAGA 1 cut(s) 1193
XceI RCATGY 3 cut(s) 769, 1003, 1253
XcmI CCANNNNNNNNNTGG 1 cut(s) 1398
XspI CTAG 3 cut(s) 864, 993, 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.