Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002228

Physical Location & Seq

Genomic Coordinates Reverse (-)

29045525 .. 29063528

Gene Structure 18004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g40920.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6744 bp

ATGCCTCCCAAACCCGCCACCCTCATCTTCCTAGGGTTTCTCCTCCTCACACTCTGCCATGCCGATCCGGATTGCCCCAAAACCAGCCCCCTCGTCAACTTGGAATCCGAATTCAAAATGCTCCAGCACCAGCTCAGAGGCTCCATCAAAATACTCGACGATTGCTCCTTCAAGGTCTCCAATTTCGACATGCTCTCCGGCTCCGACGTCCACTGGTGGGGCGCCGTCGCCCCCGATTTCAACAACCTCACTTCCGGCTTCGTCGTCTCCGACCAGAAACTCAACCAGACCTACAAAAGCGCAACCTTCACTGTGCGTCTGAGGGACAATGTCACCTGGGATCAGATCCAAGTCCTCGCCGTCTGGGACCTCCCCACCTCCTCCGATTTCGGTCACATCCTGCTCCGCGACGTAGTCAACCGCAGCTCCGGTTTGGCTCCCTCTCCGTCGCCGGCGAGCGATTCAGGGAATGCGACCAGTCAGGCTCATACTGAGCCGACTATGCTGGTGAACTGCAAGAGTTTGTCTGACAGTTTTAGGATCAGATGGACATTGCGTCCTGAGGAGAATGTGATTGATATCGGGCTGGAGGCTGCCACCGGGTCGACCAACTACATGGCTTTCGGGTGGGCCACCCCGAAAGCTACTAAGCAGATTATGCTCGGAGCGGACGTGGCCGTCGCCGGATTCGATGAGGAAGGAATGCCGTTTGTGAATGATTTTTACATCACAAAGTACAGCGAGTGCACCCAGTACAAGGACGGCTCTGTCAAAGGGGTCTGCCCTGATATAATGTATGAAGGGAGCGCCCCGAATGGGTTGGTGAACAATACCAAATTGGTTTATGGCCACCGGAGGGATGCGGTGTCGTTTATCAGGTACCAGAGGCCGTTGGAATCTGCTGATCAGAAGTATGATGTAGTGGTGAACCATACTGAGAAAATGGTGGTGATTTGGGCATTGGGGCCGATCAGGCCACCGGATACTCTTCAGCCTTACTATCTTCCCCAAAACCATGGGGGACCCCAGGATGTGGCTTATGGCTATTTGCAGCTGAATGTTTCTGAGCATGTGGATGACTGTTATGGTCCTATAGATGCCGAAGACAAGGAGGATCAGCATCTCATTATTGCCGATGCAAAGGCCCCGCTTGTGGTTACTTCCGGGCAGGCAGTGCATTATCCAGACCCTCCTAACCCTTCCAAGGTTCTTTACATTAACAAGAAAGAGGCTCCGGTGTTGAGAGTAGAAAGAGGGGTGCCGGTCACGTTTTCAATACAAGCTGGACATGATGTTGCTCTCTACATTACTTCAGATCCTCTTGGTGGGAATGCTACACTGAGGAATACAAGTGAGACTATTTATGCTGGAGGACCGGAATCTCAAGGAGTTCAAGCCAGTCCCAAGGAGTTAGTTTGGGCACCAGACAGGAATACCCCAGACCTAGTGTACTATCAATCTCTTTATGATCAGAAAATGGGATATAAGGTACAGGTGGTTGATGGGGGTCTGCCGGATATGTATAATAACAGTGTGATTTTGGATGATCAGCAAGTTACATTATTTTGGACATTGGCACATGATTCTATATCCATTGCAGTCCGGGGTGAGAAAAAAAGTGGTTTCTTGGCAATAGGATTTGGTAGGGGAATGGTGAACAACTATGCTTATGTGGGTTGGATTGATAATATTGGCAAAGGGCGGGTAAATACTTACTGGATTGATGGAAAGGATGCCTCGAGTGTGCATCCAACTTATGAGAATTTGACATATGTGAGGTGCAGGTCAGAAAATGGGATCATTACATTCGAGTTCACTCGTCCTTTGAAACCATCATGTGGTAAGAGCGATAAGCCTGAGTGCAAAAACATAATCGATCCAACTACTCCTCTTAAAGTTATATGGGCAATGGGTGCTACATGGTCAGATGATCATCTTAGTGATCAAAATATGCATTTTGTTACCAGCAGTAGGCCTATAAGGGTGCTGCTTATGCGTGGTTCTGCCGAGGCAGAGCAGGATTTGCAGCCAGTGTTAGCCGTGCATGGATTTATGATGTTTCTTGCTTGGGCTATCTTGCTTCCTGGTGGAGTACTGGCTGCTAGATACTTAAAACATGTTAAGGGTGATGGTTGGTATCGGATTCATGTATATTTGCAGTACTCAGGTTTGGCAATCGTTCTACTTGCCCTGCTTTTTGCTGTTGCTGAGCTCCGTGGTTTCTTTTTCGGCTCATTACATGTTAAATTTGGAACTACGGCTATATTTTTGGTATGTATGCAACCAGTGAATGCATACCTAAGGCCAAAGAGACCAAATAACGGAGAGCAGGTTTCCTCTAAAAGGCTTATGTGGGAGTATCTTCATGTGATCGGTGGCAGGAGTGCCATAGTAGTAGGTTTTGGAGCACTTTTCACAGGATTGCGGCATTTAGGTGATAGATATGACGGTGAAAATGTTGGGGGACTAAATTGGGCTTTGATAGTTTGGTTCTTGATCTGTGCTGTGATAGTAATATATCTGGAATACTGTGAAAGACAAAGAAGGAGGGATAGAAGTGTTGGCAGAAGCAATTGGGTACTGGGGAACCATGAGGAAGATGACTCTGTTGACTTGTTGAGTCTAAATGCTCCGAATATGAGTAGCTTGGTTGAGAGGCTGCGCACTAGATCAGACCGAAAGCCAATTTATAATATTGACGAATCTGATGACGATGGCGATTTTGGGACTGGAAAACCTGGAAGAGCTGAGGAGAAGTTTGAGAAGATTGTCAGGACTGACGTGAAAGATAATTCCTGTCAAGAGTGTGGGGAAAGCGAAAATCTTATTGAATGTGAAACATGCAACTATGCATATCATGCTAAGTGTTTACTTCCCCCGTTAAAGGCTCCTCCCCCTGATAGCTGGCGCTGTCCGGAATGTGTGAGCCCACTGATTGATATTGACAAGATTCTGGATTGCGCCATGCGACCTACTGTTGCCGGTGATGCCTTAAAGCAGGTTACAAACCAGATTTTCGTGAAACAATATCTTGTGAAGTGGAAGGGACTATCATATCTACATTGCACATGGGTTCCTGAGAAAGAATTTAATAAAGCATTCAAGACATACCCACGTCTGAAGCAGAAGGTTAACAATTTCCATCGTCAACCTTCTTCAAGTAATAATACAGATGATGATTTTGTTGCCATTCGACCCGAATGGACAACTGTTGACCGGGTCCTTGCTTGCAGGGGTGACGATGAGAAGCAATATCTTGTAAAGTGGAAAGAACTTCCTTACGATGAATGCTATTGGGAATCAGAAGCTGATATCTCCACATTTCAGTCCGAAATAGAGAGATTCCATAGAATTCAGTCTAGATCTCACAAATTGTCTGGTAAGCAGAAGACCAGTCTTAAAGATGCTCCCGAATCAAAAAAGAAACATAAAGAGTTTCAACAGTTTGAACACAGTCCTGAATTTCTTTCTGGAGGTACACTGCATCCCTATCAGCTTGAAGGTTTGAACTTCTTACGTTTCTCCTGGTCCAAACAAACTCATGTGATACTTGCTGATGAGATGGGACTTGGCAAAACTATACAGAGTATAGCTTTCTTGGCCTCTCTTTTTGAAGAGAGAGTCCGTCCACATCTAGTGGTGGCTCCTCTTTCAACTTTACGAAATTGGGAACGGGAATTTGCAACATGGGCACCTCAAATGAATGTTGTTATGTACTCTGGCTCTTCCCAAGCCCGTGCGGTCATTCGGGAATACGAATTTTACTTCCCCAAAAATCACAAGAAGATCAAGAAAAAGAAATCTGGTCAGGTTGTTGGGGAAAGCAAGCAAGATAGGATCAAGTTTGATGTCCTTCTCACATCATATGAGATGATTAACTCTGATTCTACATCACTGAAACCGATAAAGTGGGAGTGTATGATTGTTGATGAAGGACATCGTCTCAAAAACAAAGATTCAAAATTGTTTTCATCATTACAGCAGTACTCAACTGATCATCGCACACTTCTGACTGGAACTCCTCTTCAGAACAATCTGGACGAACTTTTCATGCTTATGCACTTCCTTGATGCTGCCAAGTTTGCAAGTCTAGAGGAATTCCAGGAAGAGTTTAAGGATATAAATCAGGAAGAGCAGATTTCCAAGCTTCATGACATACTTGCTCCTCATCTTCTTAGAAGGGTGAAAAAAGATGTCATGAAAGAACTTCCTCCTAAGAAAGAACTTATATTACGCATCGAATTAAGCAACAAGCAGAAAGAATATTACAAAGCTATTCTGACTCGTAACTATCAGATACTAACTCGTCGTGGTGGTGCACAGATATCTCTTATCAATGTGGTCATGGAATTGCGCAAGCTCTGTTGTCATGCTTATATGCTAGAGGGAGTCGAACCGGACATAGAAGATGCCAATGAATCTCACAAACAACTTTTGGAATCTTCTGGAAAAATGCAAGTTTTGGACAAAATGCTGGTAAAACTTCATCAGCAAGGGCACCGGGTGCTTATCTATTCACAATTTCAGCACATGTTGGATTTGCTAGAAGACTACTGTACATACAAAAAATGGCAGTATGAACGAATAGATGGCAAAGTTGGTGGAGTTGAGAGACAAATAAGGATAGATCGGTTCAATGCTGAAAATTCTTCCAGGTTTTGCTTTCTGCTTTCCACCAGAGCTGGGGGATTGGGCATAAACCTTGCAACTGCTGACACAGTGATCATATATGATAGTGATTGGAATCCTCATGCTGATCTACAAGCTATGGCTAGAGCTCATCGACTAGGGCAAACTAACAAGGTAATGATCTATAGGCTAATAACACGAGGAACCATTGAAGAACGAATGATGCAACTGACTAAGAAGAAAATGGTATTAGAGCATTTGGTTGTTGGAAAGTTAAAGGCTCAAAACATCAACCAGGAAGAGCTCGACGATATCATCAGATATGGATCCAGGGAGTTATTTGCTGATGAAAATGATGAAGCAGGAAAATCCCGTCAAATTCATTATGATGATGCTGCAATAGATAGATTACTTGATCGTGAACAAGCTGGTGATGATGACGCTCTGTTGGAGGATGAAGATGAAGATGGATTTTTAAAAGCCTTTAAGGTGGCAAATTTTAAATACATTGACGAAACAGAGGCAGTAGAAGAGGAGGAACCACAGAAGGCTGCAGTGGACAGTACAGAGACCAGTGCAGAAAAAACAAGTTTCTGGGAAGATTTGTTAAAGGACAGATATGAAGAGCATAAAGTTGAAGAATTTACTGCTTTAGGCAAAGGGAAGAGAAGTCGTAAGCAGATGGTATCTGTGGAAGATGATGATCTCGCTGGTTTGGAAGATGTAAGTTCTGATGGAGAGGATGATAACTATGAAGCTGAAGTGACGGATGGTGAAACAGCTTCCTCTGGTCCTCTTTCTGGAACTCTTTCTGGGAGAAAGCCCAGTAAAAAGAGAATTCGTGTGGATAGTGGAGAACCCCTTCCTTTGATGGAAGGAGAAGGAAGATCATTCAAAGTTTTGGGGTTCAATCAAAATCAGAGGGCTGCATTTGTACAAATTTTGATGAGGTTTGGGATGGGGGATTATGACTGGAAGGAGTTTGTAGCGCGCATGAAGCAGAAGACATATGAAGAAATAAAAGCTTATGCTACTCTGTTCATGCAACATGTAGTTGAAGAGATAACAGACTCCCCTACCTTTTCAGATGGTGTCCCTAAAGAAGGACTCAGAATACAAGACGTACTTGTTCGGATTTCTGTTATGTCTATGATTAATCAGAAAGTGAAGTTTGCAACAGAAAATCCAGGTGCTCCTTTGTATGAAGATGACATCATGTACCGTTACCCAGGATTGAAGGGTAGCAAATTTTGGAAGGAGTATCATGATGTAGTGCTGCTGCGCGCTGTGTTAAAGCATGGCTACGGAAGATGGCAAGCTATTGTTGATGACAAGGACCTCGGGATTCAAGAGGTTATTTGTCAAGAGTTGAATCTTCCGCTTCTAAATCTTTCTGTCCCAGGGCAGGCCAAAGCACATACCAATACAGAAGCACCTGGTTTAACTGCTGGAAATGGTAATGGAATAGGAGATAATGCAGCTCAGGGAACCATATCATATCAAGAGTCTTCTTTGCATCATTTTAGAGATATGCAAAGAAGACTGGTGGAATTTATAAAGAGAAGAGTGCTTCTGTTGGAAAAAGGAAACAATGCAGAAGCACAGAAAGAATACTTCGATGAAATATATGCGAATGAGCTTGCACAGATTGAGCAGCTTGGGAGGGAGACCATGAATATGCCCTACACTGGGGAGACTGAGCAACGAATGGGTGATCAGTTGCCAAGAGTTGAAGAGATCGGATCGGAAGAAATTTTAGCTACAGCTTGTGACAACGATCCAGATCGTTTAAAATTGCCTCAGCTTTATAATGAGATGTGCAAACTTGTGGAAGGAGTCACCCCTCATTCAGTGCAGACTTCTTTTGAAACTATCTGTGAAGACATGCTAAGCAGGACTCGCCCCCCTATGCAACAAGCTCCTACTTCAGCACAGCCAACACTAAATGCAGATAAACAACCAGGAGATGAGTCGAAGAGCAATCTTGTATCCCGTGAATCACACTCTGCACAAGATAAAGCTGCTCCTGCAGTAGAAGTTCAAATGAGAGACTTGTCAACAGAATCCGACCTCGAACGTATGGAGCTAGACTCCCGCAACACAGCCAATGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009736 GO:0009739 GO:0009755 GO:0009787 GO:0009788 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016043 GO:0019219 GO:0019222 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071840 GO:0080090 GO:0097159 GO:0099402 GO:1901363 GO:1901419 GO:1901420 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905957 GO:1905958 GO:2000023 GO:2000026 GO:2000069 GO:2000112 GO:2000113 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05165 ko05203 map05165 map05203

Pfam Domains

Protein Families

CHDCT2 Chromo DUF1086 DUF1087 Helicase_C PHD SNF2_N

Protein Analysis

2248

Amino Acids

254.71

Weight (kDa)

5.58

Isoelectric Point (pI)

42.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DM13	PF10517	37 - 134	2.7e-14	Electron transfer DM13
DOMON	PF03351	178 - 322	5.9e-12	DOMON domain
At5g54830	PF25489	376 - 501	4.7e-68	At5g54830-like domain
DOMON	PF03351	515 - 638	2.4e-23	DOMON domain
PHD	PF00628	933 - 974	1.1e-07	PHD-finger
Chromo	PF00385	994 - 1033	3.3e-08	Chromo (CHRromatin Organisation MOdifier) domain
Chromo	PF00385	1070 - 1117	1.6e-13	Chromo (CHRromatin Organisation MOdifier) domain
ResIII	PF04851	1161 - 1341	6e-10	Type III restriction enzyme, res subunit
SNF2-rel_dom	PF00176	1164 - 1460	2.4e-81	SNF2-related domain
HDA2-3	PF11496	1414 - 1626	7.1e-08	Class II histone deacetylase complex subunits 2 and 3
Helicase_C	PF00271	1484 - 1597	8.1e-24	Helicase conserved C-terminal domain
DUF1087	PF06465	1720 - 1778	8.6e-23	CHD subfamily II, DUF1087
CHDII_SANT-like	PF06461	1814 - 1946	5.1e-58	CHD subfamily II, SANT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25170 AT2G25170 AT2G25170 AT2G25170 AT4G31900 AT4G31900 AT4G31900
fragaria_vesca	FvH4_2g40920
malus_domestica	MD08G1058800.v1.1 MD15G1037700.v1.1
prunus_persica	Prupe.1G391600_v2.0.a1
pyrus_communis	pycom08g04860 pycom08g04870 pycom15g03490
rosa_chinensis	RchiOBHm_Chr3g0455421 RchiOBHm_Chr6g0299661
rosa_laevigata	RLG00000011399 RLG00000025364
rosa_multiflora	Rmu_co8019708.1_g000001 Rmu_co8099568.1_g000001 Rmu_sc0022216.1_g000002 Rmu_sc0024261.1_g000001 Rmu_sc0024262.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424300 Rroxscaffold_7G00168470
rosa_rugosa	Rorug03G0007200 Rorug03G0007300 Rorug03G0007400 Rorug04G0013500 Rorug06G0291400
rosa_samantha	Rh3AG066700 Rh3BG069100 Rh3CG067500 Rh3DG069000 Rh5AG515500 Rh6AG402100 Rh6BG410600 Rh6CG416300 Rh6CG416400 Rh6DG403500
rosa_wichuraiana	Rw2G021110 Rw3G005270 Rw6G035200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	2691, 6185, 6438
AasI	GACNNNNNNGTC	2 cut(s)	677, 767
AatII	GACGTC	1 cut(s)	210
Acc16I	TGCGCA	2 cut(s)	2663, 4355
Acc36I	ACCTGC	3 cut(s)	1773, 2320, 2989
Acc65I	GGTACC	1 cut(s)	879
AccB1I	GGYRCC	6 cut(s)	221, 879, 1258, 1420, 3691, 4497
AccB7I	CCANNNNNTGG	2 cut(s)	1033, 1838
AccBSI	CCGCTC	1 cut(s)	668
AccI	GTMKAC	1 cut(s)	605
AccII	CGCG	3 cut(s)	408, 5620, 5913
AccIII	TCCGGA	2 cut(s)	67, 2914
AcoI	YGGCCR	2 cut(s)	675, 847
AcuI	CTGAAG	6 cut(s)	974, 1296, 3140, 4010, 5409, 6540
AcyI	GRCGYC	2 cut(s)	207, 222
AdeI	CACNNNGTG	1 cut(s)	4504
AflIII	ACRYGT	4 cut(s)	2116, 2239, 4530, 5677
AhdI	GACNNNNNGTC	1 cut(s)	555
AjiI	CACGTC	3 cut(s)	673, 2782, 3116
Alw21I	GWGCWC	7 cut(s)	749, 2214, 2410, 4321, 4780, 4935, 5824
Alw44I	GTGCAC	2 cut(s)	745, 4317
AlwNI	CAGNNNCTG	1 cut(s)	3308
Ama87I	CYCGRG	2 cut(s)	1738, 5969
Aor13HI	TCCGGA	2 cut(s)	67, 2914
ApaLI	GTGCAC	2 cut(s)	745, 4317
AseI	ATTAAT	1 cut(s)	5784
Asp700I	GAANNNNTTC	2 cut(s)	5437, 5490
Asp718I	GGTACC	1 cut(s)	879
AspA2I	CCTAGG	1 cut(s)	31
AsuC2I	CCSGG	5 cut(s)	601, 1165, 1604, 3218, 4502
AvaI	CYCGRG	2 cut(s)	1738, 5969
AvaII	GGWCC	8 cut(s)	367, 1022, 1088, 1373, 3220, 3528, 5420, 5965
AvrII	CCTAGG	1 cut(s)	31
AxyI	CCTNAGG	2 cut(s)	561, 2300
BaeGI	GKGCMC	5 cut(s)	749, 1423, 3694, 4321, 4500
BalI	TGGCCA	1 cut(s)	849
BamHI	GGATCC	1 cut(s)	4955
BanI	GGYRCC	6 cut(s)	221, 879, 1258, 1420, 3691, 4497
BanII	GRGCYC	4 cut(s)	2214, 2930, 4780, 4935
BauI	CACGAG	1 cut(s)	4827
BbsI	GAAGAC	7 cut(s)	1110, 3395, 4554, 5639, 6129, 6175, 6516
Bbv12I	GWGCWC	7 cut(s)	749, 2214, 2410, 4321, 4780, 4935, 5824
BbvCI	CCTCAGC	2 cut(s)	2748, 6429
BceAI	ACGGC	8 cut(s)	209, 344, 662, 691, 778, 874, 2024, 2274
BciVI	GTATCC	2 cut(s)	976, 6628
BclI	TGATCA	8 cut(s)	904, 1468, 1546, 1930, 1942, 3994, 4722, 6343
BcnI	CCSGG	5 cut(s)	601, 1165, 1604, 3218, 4502
BfmI	CTRYAG	5 cut(s)	1092, 4813, 5181, 6390, 6657
BfoI	RGCGCY	3 cut(s)	225, 810, 2911
BfuAI	ACCTGC	3 cut(s)	1773, 2320, 2989
BfuI	GTATCC	2 cut(s)	976, 6628
BglI	GCCNNNNNGGC	1 cut(s)	973
BglII	AGATCT	1 cut(s)	3362
BlnI	CCTAGG	1 cut(s)	31
BlpI	GCTNAGC	2 cut(s)	2208, 6518
BmcAI	AGTACT	3 cut(s)	2094, 2162, 3986
Bme18I	GGWCC	8 cut(s)	367, 1022, 1088, 1373, 3220, 3528, 5420, 5965
BmeRI	GACNNNNNGTC	1 cut(s)	555
BmeT110I	CYCGRG	2 cut(s)	1738, 5969
BmgBI	CACGTC	3 cut(s)	673, 2782, 3116
BmrI	ACTGGG	4 cut(s)	745, 2591, 5448, 6327
BmuI	ACTGGG	4 cut(s)	745, 2591, 5448, 6327
BpiI	GAAGAC	7 cut(s)	1110, 3395, 4554, 5639, 6129, 6175, 6516
BplI	GAGNNNNNCTC	2 cut(s)	6704, 6736
BpmI	CTGGAG	4 cut(s)	107, 608, 1389, 3492
Bpu10I	CCTNAGC	3 cut(s)	2748, 6111, 6429
Bpu1102I	GCTNAGC	2 cut(s)	2208, 6518
BpuEI	CTTGAG	1 cut(s)	1368
BpuMI	CCSGG	5 cut(s)	601, 1165, 1604, 3218, 4502
Bsa29I	ATCGAT	1 cut(s)	1875
BsaBI	GATNNNNATC	8 cut(s)	578, 1119, 1932, 4122, 4743, 4954, 5331, 6411
BsaHI	GRCGYC	2 cut(s)	207, 222
BsaI	GGTCTC	4 cut(s)	181, 2305, 5192, 6290
BsaWI	WCCGGW	8 cut(s)	67, 428, 852, 979, 1234, 1375, 2914, 4396
Bse118I	RCCGGY	3 cut(s)	451, 1261, 2981
Bse21I	CCTNAGG	2 cut(s)	561, 2300
Bse3DI	GCAATG	4 cut(s)	551, 1593, 1914, 3061
Bse8I	GATNNNNATC	8 cut(s)	578, 1119, 1932, 4122, 4743, 4954, 5331, 6411
BseAI	TCCGGA	2 cut(s)	67, 2914
BseCI	ATCGAT	1 cut(s)	1875
BseJI	GATNNNNATC	8 cut(s)	578, 1119, 1932, 4122, 4743, 4954, 5331, 6411
BseMI	GCAATG	4 cut(s)	551, 1593, 1914, 3061
BsePI	GCGCGC	2 cut(s)	5618, 5911
BseSI	GKGCMC	5 cut(s)	749, 1423, 3694, 4321, 4500
BseYI	CCCAGC	1 cut(s)	4682
BsgI	GTGCAG	4 cut(s)	1801, 5226, 6503, 6621
Bsh1236I	CGCG	3 cut(s)	408, 5620, 5913
BshNI	GGYRCC	6 cut(s)	221, 879, 1258, 1420, 3691, 4497
BshVI	ATCGAT	1 cut(s)	1875
BsiHKAI	GWGCWC	7 cut(s)	749, 2214, 2410, 4321, 4780, 4935, 5824
BsiHKCI	CYCGRG	2 cut(s)	1738, 5969
BsmBI	CGTCTC	2 cut(s)	271, 3947
BsmI	GAATGC	6 cut(s)	475, 708, 1336, 2296, 3098, 3293
Bso31I	GGTCTC	4 cut(s)	181, 2305, 5192, 6290
BsoBI	CYCGRG	2 cut(s)	1738, 5969
Bsp13I	TCCGGA	2 cut(s)	67, 2914
Bsp1407I	TGTACA	2 cut(s)	4556, 5563
Bsp1720I	GCTNAGC	2 cut(s)	2208, 6518
Bsp19I	CCATGG	1 cut(s)	1015
BspDI	ATCGAT	1 cut(s)	1875
BspEI	TCCGGA	2 cut(s)	67, 2914
BspFNI	CGCG	3 cut(s)	408, 5620, 5913
BspHI	TCATGA	3 cut(s)	4150, 4197, 5893
BspMAI	CTGCAG	2 cut(s)	5185, 6661
BspMI	ACCTGC	3 cut(s)	1773, 2320, 2989
BspQI	GCTCTTC	6 cut(s)	2737, 3730, 4125, 4923, 5247, 6599
BspT107I	GGYRCC	6 cut(s)	221, 879, 1258, 1420, 3691, 4497
BspTNI	GGTCTC	4 cut(s)	181, 2305, 5192, 6290
BsrBI	CCGCTC	1 cut(s)	668
BsrDI	GCAATG	4 cut(s)	551, 1593, 1914, 3061
BsrFI	RCCGGY	3 cut(s)	451, 1261, 2981
BsrGI	TGTACA	2 cut(s)	4556, 5563
BssAI	RCCGGY	3 cut(s)	451, 1261, 2981
BssHII	GCGCGC	2 cut(s)	5618, 5911
BssNI	GRCGYC	2 cut(s)	207, 222
BssSI	CACGAG	1 cut(s)	4827
BssT1I	CCWWGG	4 cut(s)	31, 1015, 1203, 1404
Bst2BI	CACGAG	1 cut(s)	4827
BstACI	GRCGYC	2 cut(s)	207, 222
BstAPI	GCANNNNNTGC	6 cut(s)	658, 1174, 1913, 2023, 2858, 4504
BstAUI	TGTACA	2 cut(s)	4556, 5563
BstDSI	CCRYGG	2 cut(s)	1015, 2215
BstENI	CCTNNNNNAGG	2 cut(s)	2341, 5730
BstFNI	CGCG	3 cut(s)	408, 5620, 5913
BstH2I	RGCGCY	3 cut(s)	225, 810, 2911
BstNSI	RCATGY	8 cut(s)	193, 1073, 2120, 2243, 2844, 4534, 5681, 6517
BstSFI	CTRYAG	5 cut(s)	1092, 4813, 5181, 6390, 6657
BstSLI	GKGCMC	5 cut(s)	749, 1423, 3694, 4321, 4500
BstUI	CGCG	3 cut(s)	408, 5620, 5913
BstV2I	GAAGAC	7 cut(s)	1110, 3395, 4554, 5639, 6129, 6175, 6516
BstX2I	RGATCY	4 cut(s)	345, 1315, 3362, 4955
BstXI	CCANNNNNNTGG	2 cut(s)	616, 1016
BstYI	RGATCY	4 cut(s)	345, 1315, 3362, 4955
Bsu15I	ATCGAT	1 cut(s)	1875
Bsu36I	CCTNAGG	2 cut(s)	561, 2300
BsuI	GTATCC	2 cut(s)	976, 6628
BsuTUI	ATCGAT	1 cut(s)	1875
BtgI	CCRYGG	2 cut(s)	1015, 2215
BtgZI	GCGATG	1 cut(s)	3983
BtrI	CACGTC	3 cut(s)	673, 2782, 3116
BtsI	GCAGTG	3 cut(s)	1179, 3479, 5190
BveI	ACCTGC	3 cut(s)	1773, 2320, 2989
CaiI	CAGNNNCTG	1 cut(s)	3308
CciI	TCATGA	3 cut(s)	4150, 4197, 5893
Cfr10I	RCCGGY	3 cut(s)	451, 1261, 2981
ClaI	ATCGAT	1 cut(s)	1875
CseI	GACGC	3 cut(s)	305, 545, 5078
CsiI	ACCWGGT	1 cut(s)	6064
CspCI	CAANNNNNGTGG	2 cut(s)	4582, 4617
DinI	GGCGCC	1 cut(s)	223
DraI	TTTAAA	3 cut(s)	5106, 5131, 6420
DraIII	CACNNNGTG	1 cut(s)	4504
DrdI	GACNNNNNNGTC	2 cut(s)	677, 767
DriI	GACNNNNNGTC	1 cut(s)	555
DseDI	GACNNNNNNGTC	2 cut(s)	677, 767
EaeI	YGGCCR	2 cut(s)	675, 847
Eam1105I	GACNNNNNGTC	1 cut(s)	555
Ecl136II	GAGCTC	3 cut(s)	2212, 4778, 4933
Eco130I	CCWWGG	4 cut(s)	31, 1015, 1203, 1404
Eco147I	AGGCCT	1 cut(s)	1975
Eco24I	GRGCYC	4 cut(s)	2214, 2930, 4780, 4935
Eco31I	GGTCTC	4 cut(s)	181, 2305, 5192, 6290
Eco32I	GATATC	4 cut(s)	580, 3313, 4326, 4942
Eco47I	GGWCC	8 cut(s)	367, 1022, 1088, 1373, 3220, 3528, 5420, 5965
Eco53kI	GAGCTC	3 cut(s)	2212, 4778, 4933
Eco57I	CTGAAG	6 cut(s)	974, 1296, 3140, 4010, 5409, 6540
Eco81I	CCTNAGG	2 cut(s)	561, 2300
Eco88I	CYCGRG	2 cut(s)	1738, 5969
EcoICRI	GAGCTC	3 cut(s)	2212, 4778, 4933
EcoNI	CCTNNNNNAGG	2 cut(s)	2341, 5730
EcoO109I	RGGNCCY	5 cut(s)	367, 1022, 1144, 3220, 5965
EcoRI	GAATTC	4 cut(s)	110, 3351, 4097, 5466
EcoRV	GATATC	4 cut(s)	580, 3313, 4326, 4942
EcoT14I	CCWWGG	4 cut(s)	31, 1015, 1203, 1404
EcoT22I	ATGCAT	3 cut(s)	1956, 2296, 2854
EcoT38I	GRGCYC	4 cut(s)	2214, 2930, 4780, 4935
EgeI	GGCGCC	1 cut(s)	223
EheI	GGCGCC	1 cut(s)	223
ErhI	CCWWGG	4 cut(s)	31, 1015, 1203, 1404
Esp3I	CGTCTC	2 cut(s)	271, 3947
FalI	AAGNNNNNCTT	2 cut(s)	5739, 5771
FauI	CCCGC	4 cut(s)	22, 1155, 1695, 6731
FauNDI	CATATG	3 cut(s)	1771, 3865, 5638
FbaI	TGATCA	8 cut(s)	904, 1468, 1546, 1930, 1942, 3994, 4722, 6343
FblI	GTMKAC	1 cut(s)	605
FriOI	GRGCYC	4 cut(s)	2214, 2930, 4780, 4935
FspI	TGCGCA	2 cut(s)	2663, 4355
GsaI	CCCAGC	1 cut(s)	4686
GsuI	CTGGAG	4 cut(s)	107, 608, 1389, 3492
HaeII	RGCGCY	3 cut(s)	225, 810, 2911
HgaI	GACGC	3 cut(s)	305, 545, 5078
Hin1I	GRCGYC	2 cut(s)	207, 222
HincII	GTYRAC	8 cut(s)	97, 418, 606, 2611, 3133, 3149, 3214, 6687
HindII	GTYRAC	8 cut(s)	97, 418, 606, 2611, 3133, 3149, 3214, 6687
HindIII	AAGCTT	2 cut(s)	4145, 5652
HpaI	GTTAAC	1 cut(s)	3133
Hpy99I	CGWCG	9 cut(s)	161, 209, 230, 266, 413, 451, 683, 4311, 4940
HpyCH4IV	ACGT	9 cut(s)	207, 411, 672, 1268, 2781, 3115, 3517, 5751, 6706
HpySE526I	ACGT	9 cut(s)	207, 411, 672, 1268, 2781, 3115, 3517, 5751, 6706
Hsp92I	GRCGYC	2 cut(s)	207, 222
KasI	GGCGCC	1 cut(s)	221
KflI	GGGWCCC	1 cut(s)	1022
Kpn2I	TCCGGA	2 cut(s)	67, 2914
KpnI	GGTACC	1 cut(s)	883
KroI	GCCGGC	1 cut(s)	451
KroNI	GCCGGC	1 cut(s)	453
Ksp22I	TGATCA	8 cut(s)	904, 1468, 1546, 1930, 1942, 3994, 4722, 6343
KspAI	GTTAAC	1 cut(s)	3133
LguI	GCTCTTC	6 cut(s)	2737, 3730, 4125, 4923, 5247, 6599
MabI	ACCWGGT	1 cut(s)	6064
MaeII	ACGT	9 cut(s)	207, 411, 672, 1268, 2781, 3115, 3517, 5751, 6706
MbiI	CCGCTC	1 cut(s)	668
MfeI	CAATTG	1 cut(s)	2572
MflI	RGATCY	4 cut(s)	345, 1315, 3362, 4955
MlsI	TGGCCA	1 cut(s)	849
MluNI	TGGCCA	1 cut(s)	849
Mly113I	GGCGCC	1 cut(s)	222
Mox20I	TGGCCA	1 cut(s)	849
Mph1103I	ATGCAT	3 cut(s)	1956, 2296, 2854
MreI	CGCCGGCG	1 cut(s)	451
MroI	TCCGGA	2 cut(s)	67, 2914
MroNI	GCCGGC	1 cut(s)	451
MroXI	GAANNNNTTC	2 cut(s)	5437, 5490
MscI	TGGCCA	1 cut(s)	849
MslI	CAYNNNNRTG	6 cut(s)	1074, 1938, 2433, 4055, 5016, 6305
Msp20I	TGGCCA	1 cut(s)	849
MspA1I	CMGCKG	1 cut(s)	1054
MunI	CAATTG	1 cut(s)	2572
Mva1269I	GAATGC	6 cut(s)	475, 708, 1336, 2296, 3098, 3293
MvnI	CGCG	3 cut(s)	408, 5620, 5913
NaeI	GCCGGC	1 cut(s)	453
NarI	GGCGCC	1 cut(s)	222
NciI	CCSGG	5 cut(s)	601, 1165, 1604, 3218, 4502
NcoI	CCATGG	1 cut(s)	1015
NdeI	CATATG	3 cut(s)	1771, 3865, 5638
NgoMIV	GCCGGC	1 cut(s)	451
NmeAIII	GCCGAG	1 cut(s)	2032
NmuCI	GTSAC	7 cut(s)	331, 392, 1264, 3236, 5392, 6398, 6466
NsbI	TGCGCA	2 cut(s)	2663, 4355
NsiI	ATGCAT	3 cut(s)	1956, 2296, 2854
NspI	RCATGY	8 cut(s)	193, 1073, 2120, 2243, 2844, 4534, 5681, 6517
PaeR7I	CTCGAG	1 cut(s)	1738
PagI	TCATGA	3 cut(s)	4150, 4197, 5893
PasI	CCCWGGG	1 cut(s)	6029
PauI	GCGCGC	2 cut(s)	5618, 5911
PceI	AGGCCT	1 cut(s)	1975
PciI	ACATGT	4 cut(s)	2116, 2239, 4530, 5677
PciSI	GCTCTTC	6 cut(s)	2737, 3730, 4125, 4923, 5247, 6599
PcsI	WCGNNNNNNNCGW	3 cut(s)	267, 669, 687
PctI	GAATGC	6 cut(s)	475, 708, 1336, 2296, 3098, 3293
PdiI	GCCGGC	1 cut(s)	453
PdmI	GAANNNNTTC	2 cut(s)	5437, 5490
PflFI	GACNNNGTC	4 cut(s)	329, 413, 3218, 3939
PflMI	CCANNNNNTGG	2 cut(s)	1033, 1838
PfoI	TCCNGGA	1 cut(s)	4101
PluTI	GGCGCC	1 cut(s)	225
PpuMI	RGGWCCY	4 cut(s)	367, 1022, 3220, 5965
PscI	ACATGT	4 cut(s)	2116, 2239, 4530, 5677
PshBI	ATTAAT	1 cut(s)	5784
PsiI	TTATAA	3 cut(s)	2691, 6185, 6438
Psp124BI	GAGCTC	3 cut(s)	2214, 4780, 4935
Psp5II	RGGWCCY	4 cut(s)	367, 1022, 3220, 5965
PspFI	CCCAGC	1 cut(s)	4682
PspPPI	RGGWCCY	4 cut(s)	367, 1022, 3220, 5965
PspXI	VCTCGAGB	1 cut(s)	1738
PsrI	GAACNNNNNNTAC	2 cut(s)	4215, 4247
PstI	CTGCAG	2 cut(s)	5185, 6661
PstNI	CAGNNNCTG	1 cut(s)	3308
PsuI	RGATCY	4 cut(s)	345, 1315, 3362, 4955
PsyI	GACNNNGTC	4 cut(s)	329, 413, 3218, 3939
PteI	GCGCGC	2 cut(s)	5618, 5911
PvuII	CAGCTG	1 cut(s)	1054
RseI	CAYNNNNRTG	6 cut(s)	1074, 1938, 2433, 4055, 5016, 6305
SacI	GAGCTC	3 cut(s)	2214, 4780, 4935
SalI	GTCGAC	1 cut(s)	604
SapI	GCTCTTC	6 cut(s)	2737, 3730, 4125, 4923, 5247, 6599
ScaI	AGTACT	3 cut(s)	2094, 2162, 3986
SexAI	ACCWGGT	1 cut(s)	6064
SfcI	CTRYAG	5 cut(s)	1092, 4813, 5181, 6390, 6657
SfiI	GGCCNNNNNGGCC	1 cut(s)	973
SfoI	GGCGCC	1 cut(s)	223
Sfr274I	CTCGAG	1 cut(s)	1738
SgrAI	CRCCGGYG	1 cut(s)	451
SinI	GGWCC	8 cut(s)	367, 1022, 1088, 1373, 3220, 3528, 5420, 5965
SlaI	CTCGAG	1 cut(s)	1738
SmiMI	CAYNNNNRTG	6 cut(s)	1074, 1938, 2433, 4055, 5016, 6305
SmlI	CTYRAG	2 cut(s)	1383, 1738
SmoI	CTYRAG	2 cut(s)	1383, 1738
SseBI	AGGCCT	1 cut(s)	1975
SspDI	GGCGCC	1 cut(s)	221
SspI	AATATT	3 cut(s)	1690, 2695, 4265
SstI	GAGCTC	3 cut(s)	2214, 4780, 4935
StuI	AGGCCT	1 cut(s)	1975
StyI	CCWWGG	4 cut(s)	31, 1015, 1203, 1404
TaiI	ACGT	9 cut(s)	210, 414, 675, 1271, 2784, 3118, 3520, 5754, 6709
TaqII	GACCGA	2 cut(s)	380, 2691
TauI	GCSGC	1 cut(s)	2428
TseFI	GTSAC	7 cut(s)	331, 392, 1264, 3236, 5392, 6398, 6466
Tsp45I	GTSAC	7 cut(s)	331, 392, 1264, 3236, 5392, 6398, 6466
TspGWI	ACGGA	6 cut(s)	435, 2204, 2337, 3614, 5411, 5949
Tth111I	GACNNNGTC	4 cut(s)	329, 413, 3218, 3939
Van91I	CCANNNNNTGG	2 cut(s)	1033, 1838
VneI	GTGCAC	2 cut(s)	745, 4317
VpaK11BI	GGWCC	8 cut(s)	367, 1022, 1088, 1373, 3220, 3528, 5420, 5965
VspI	ATTAAT	1 cut(s)	5784
XagI	CCTNNNNNAGG	2 cut(s)	2341, 5730
XbaI	TCTAGA	2 cut(s)	3359, 4090
XceI	RCATGY	8 cut(s)	193, 1073, 2120, 2243, 2844, 4534, 5681, 6517
XhoI	CTCGAG	1 cut(s)	1738
XmaJI	CCTAGG	1 cut(s)	31
XmiI	GTMKAC	1 cut(s)	605
XmnI	GAANNNNTTC	2 cut(s)	5437, 5490
ZraI	GACGTC	1 cut(s)	208
ZrmI	AGTACT	3 cut(s)	2094, 2162, 3986
Zsp2I	ATGCAT	3 cut(s)	1956, 2296, 2854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.