Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002228

Physical Location & Seq

Genomic Coordinates Reverse (-)

589888 .. 592543

Gene Structure 2656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0007400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGATAGGATGGGAAGATGTTTACAAGGTGGTGGTAGCCATGGCACCACTCTACTTTGCACTTATTTTAGGATTTGGCTCCGTCAGGTGGTGGCACATCTTCACTCCTGAGCAGTGCGGCGCCATAAACCGCTTTGTTTGCTTCTTCACCCTCCCACTCTTCACGTTCGAATTCACTGTTCACGTCGATCCTTTCGAGTGGAACTACCGCTTCATCGCGGCCGATGCCATTTCCAAGCTCATAATCGTGGTTGTGCTCGCGTTTTGGGCAAAGTGTAGTAGCAAGGGAAGCTATAGTTGGTCAATAACAAGCTTCTCTCTCTGCACTTTAACTAATTCACTTGTCGTTGGAGTGCCCCTAATGAAAGCTATGTACGGCCCGATGGCTGTTGATCTGGTAGTTCAGTCTTCGGTGGTGCAAGCTATCGTATGGCTCACGGTGCTTCTGTTCGTCTTGGAATTTCGAAGGACGGGGCTAGACATCTCTTCGGGGTCGAGTAATGATACCCGGGTTCAATCAGTTGAGCAAGGTGGGAAAGATTTAGATGGCATGAACGAGAGCACTCTGGCTTCACCTTCTTATTATTACTGGTCTTTGATGAAGGGTGTGTGGCTCAAACTTGGGATGAATCCCAACTCTTATGCAGTTTTCATTGGAATTGCTTGGGCTTTTATAGCAAACAGGTGGCATATTGAGTTGCCAAGCATTATGGAGGGATCTGTTTTAATCATGTCGAAGGCTGGTACCGGAACTGCCATGTTTAGCATGGGTATCTTCATGGCACTGCAAGAGAAATTCGTAGCTTGTGGGACGAGCCTAACGATAATAGGGATGATTTTGAGGTTCATTGCCGGACCGGCAGCCATGGCTATCGGCTCTATCGCTGTTGGCTTGCATGGTGATGTTTTACGTGTTGCTATCATTCAGGCAGCATTGCCACAATCGATTACCTCCTTCATATATGCCAAAGAATATGGACTCCATGCAGAAGTTTTGAGCACCGCAGTAATATTTGGAATGATGGTGTCCCTTCCGGTGTTGATCGCCTACTATGCAGTTTTAGAATTTGTGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009736 GO:0009739 GO:0009755 GO:0009787 GO:0009788 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016043 GO:0019219 GO:0019222 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071840 GO:0080090 GO:0097159 GO:0099402 GO:1901363 GO:1901419 GO:1901420 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905957 GO:1905958 GO:2000023 GO:2000026 GO:2000069 GO:2000112 GO:2000113 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05165 ko05203 map05165 map05203

Pfam Domains

Protein Families

CHDCT2 Chromo DUF1086 DUF1087 Helicase_C PHD SNF2_N

Protein Analysis

358

Amino Acids

39.41

Weight (kDa)

6.3

Isoelectric Point (pI)

40.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mem_trans	PF03547	10 - 351	4.4e-76	Membrane transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25170 AT2G25170 AT2G25170 AT2G25170 AT4G31900 AT4G31900 AT4G31900
fragaria_vesca	FvH4_2g40920
malus_domestica	MD08G1058800.v1.1 MD15G1037700.v1.1
prunus_persica	Prupe.1G391600_v2.0.a1
pyrus_communis	pycom08g04860 pycom08g04870 pycom15g03490
rosa_chinensis	RchiOBHm_Chr3g0455421 RchiOBHm_Chr6g0299661
rosa_laevigata	RLG00000011399 RLG00000025364
rosa_multiflora	Rmu_co8019708.1_g000001 Rmu_co8099568.1_g000001 Rmu_sc0022216.1_g000002 Rmu_sc0024261.1_g000001 Rmu_sc0024262.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424300 Rroxscaffold_7G00168470
rosa_rugosa	Rorug03G0007200 Rorug03G0007300 Rorug03G0007400 Rorug04G0013500 Rorug06G0291400
rosa_samantha	Rh3AG066700 Rh3BG069100 Rh3CG067500 Rh3DG069000 Rh5AG515500 Rh6AG402100 Rh6BG410600 Rh6CG416300 Rh6CG416400 Rh6DG403500
rosa_wichuraiana	Rw2G021110 Rw3G005270 Rw6G035200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	743
AccB1I	GGYRCC	3 cut(s)	43, 119, 743
AccII	CGCG	2 cut(s)	218, 260
AciI	CCGC	5 cut(s)	117, 130, 208, 218, 1002
AclWI	GGATC	2 cut(s)	182, 724
AcoI	YGGCCR	1 cut(s)	219
AcsI	RAATTY	4 cut(s)	170, 458, 794, 1064
AcyI	GRCGYC	1 cut(s)	120
AfaI	GTAC	2 cut(s)	374, 745
AfiI	CCNNNNNNNGG	1 cut(s)	87
AflIII	ACRYGT	1 cut(s)	910
AgsI	TTSAA	1 cut(s)	515
AjiI	CACGTC	1 cut(s)	184
AjuI	GAANNNNNNNTTGG	2 cut(s)	280, 312
AluBI	AGCT	6 cut(s)	238, 291, 312, 368, 422, 803
AluI	AGCT	6 cut(s)	238, 291, 312, 368, 422, 803
Alw21I	GWGCWC	3 cut(s)	258, 563, 1001
AlwI	GGATC	2 cut(s)	182, 724
Ama87I	CYCGRG	1 cut(s)	507
AoxI	GGCC	2 cut(s)	219, 376
ApeKI	GCWGC	2 cut(s)	860, 929
ApoI	RAATTY	4 cut(s)	170, 458, 794, 1064
Asp718I	GGTACC	1 cut(s)	743
AspLEI	GCGC	1 cut(s)	122
AspS9I	GGNCC	2 cut(s)	377, 854
AsuC2I	CCSGG	2 cut(s)	508, 509
AsuHPI	GGTGA	3 cut(s)	139, 564, 911
AsuII	TTCGAA	2 cut(s)	168, 463
AvaI	CYCGRG	1 cut(s)	507
AvaII	GGWCC	1 cut(s)	854
BaeGI	GKGCMC	1 cut(s)	357
BaeI	ACNNNNGTAYC	2 cut(s)	495, 528
BanI	GGYRCC	3 cut(s)	43, 119, 743
BbsI	GAAGAC	1 cut(s)	399
Bbv12I	GWGCWC	3 cut(s)	258, 563, 1001
BbvI	GCAGC	2 cut(s)	872, 941
BccI	CCATC	4 cut(s)	3, 376, 539, 1015
BceAI	ACGGC	1 cut(s)	391
BcnI	CCSGG	2 cut(s)	508, 509
BfaI	CTAG	1 cut(s)	476
BfmI	CTRYAG	1 cut(s)	292
BfoI	RGCGCY	1 cut(s)	123
BglI	GCCNNNNNGGC	1 cut(s)	857
BisI	GCNGC	4 cut(s)	118, 219, 861, 930
BlsI	GCNGC	4 cut(s)	119, 220, 862, 931
Bme1390I	CCNGG	2 cut(s)	508, 509
Bme18I	GGWCC	1 cut(s)	854
BmeT110I	CYCGRG	1 cut(s)	507
BmgBI	CACGTC	1 cut(s)	184
BmgT120I	GGNCC	2 cut(s)	377, 854
BmiI	GGNNCC	4 cut(s)	45, 79, 121, 745
BmrFI	CCNGG	2 cut(s)	508, 509
BmsI	GCATC	1 cut(s)	214
BpiI	GAAGAC	1 cut(s)	399
Bpu10I	CCTNAGC	1 cut(s)	108
Bpu14I	TTCGAA	2 cut(s)	168, 463
BpuMI	CCSGG	2 cut(s)	508, 509
Bsa29I	ATCGAT	1 cut(s)	944
BsaAI	YACGTR	1 cut(s)	911
BsaHI	GRCGYC	1 cut(s)	120
BsaJI	CCNNGG	3 cut(s)	39, 507, 864
BsaWI	WCCGGW	2 cut(s)	746, 1033
Bsc4I	CCNNNNNNNGG	1 cut(s)	87
Bse118I	RCCGGY	1 cut(s)	856
Bse1I	ACTGG	1 cut(s)	593
Bse3DI	GCAATG	2 cut(s)	846, 932
BseCI	ATCGAT	1 cut(s)	944
BseDI	CCNNGG	3 cut(s)	39, 507, 864
BseGI	GGATG	3 cut(s)	14, 630, 837
BseLI	CCNNNNNNNGG	1 cut(s)	87
BseMI	GCAATG	2 cut(s)	846, 932
BseMII	CTCAG	1 cut(s)	99
BseNI	ACTGG	1 cut(s)	593
BseSI	GKGCMC	1 cut(s)	357
BseX3I	CGGCCG	1 cut(s)	219
BseXI	GCAGC	2 cut(s)	872, 941
BsgI	GTGCAG	1 cut(s)	307
Bsh1236I	CGCG	2 cut(s)	218, 260
Bsh1285I	CGRYCG	1 cut(s)	222
BshFI	GGCC	2 cut(s)	221, 378
BshNI	GGYRCC	3 cut(s)	43, 119, 743
BshVI	ATCGAT	1 cut(s)	944
BsiEI	CGRYCG	1 cut(s)	222
BsiHKAI	GWGCWC	3 cut(s)	258, 563, 1001
BsiHKCI	CYCGRG	1 cut(s)	507
BsiSI	CCGG	5 cut(s)	508, 747, 852, 857, 1034
BslFI	GGGAC	2 cut(s)	823, 1012
BslI	CCNNNNNNNGG	1 cut(s)	87
BsmFI	GGGAC	2 cut(s)	823, 1012
BsnI	GGCC	2 cut(s)	221, 378
BsoBI	CYCGRG	1 cut(s)	507
Bsp119I	TTCGAA	2 cut(s)	168, 463
Bsp1286I	GDGCHC	4 cut(s)	258, 357, 563, 1001
Bsp143I	GATC	4 cut(s)	187, 391, 716, 1041
Bsp19I	CCATGG	2 cut(s)	39, 864
BspACI	CCGC	5 cut(s)	117, 130, 208, 218, 1002
BspANI	GGCC	2 cut(s)	221, 378
BspCNI	CTCAG	1 cut(s)	100
BspDI	ATCGAT	1 cut(s)	944
BspFNI	CGCG	2 cut(s)	218, 260
BspLI	GGNNCC	4 cut(s)	45, 79, 121, 745
BspPI	GGATC	2 cut(s)	182, 724
BspT104I	TTCGAA	2 cut(s)	168, 463
BspT107I	GGYRCC	3 cut(s)	43, 119, 743
BsrDI	GCAATG	2 cut(s)	846, 932
BsrFI	RCCGGY	1 cut(s)	856
BsrI	ACTGG	1 cut(s)	593
BssAI	RCCGGY	1 cut(s)	856
BssECI	CCNNGG	3 cut(s)	39, 507, 864
BssMI	GATC	4 cut(s)	187, 391, 716, 1041
BssNI	GRCGYC	1 cut(s)	120
BssT1I	CCWWGG	2 cut(s)	39, 864
Bst4CI	ACNGT	2 cut(s)	178, 439
Bst6I	CTCTTC	2 cut(s)	164, 490
BstACI	GRCGYC	1 cut(s)	120
BstBAI	YACGTR	1 cut(s)	911
BstBI	TTCGAA	2 cut(s)	168, 463
BstC8I	GCNNGC	3 cut(s)	258, 420, 893
BstDEI	CTNAG	1 cut(s)	108
BstDSI	CCRYGG	2 cut(s)	39, 864
BstF5I	GGATG	3 cut(s)	14, 630, 837
BstFNI	CGCG	2 cut(s)	218, 260
BstH2I	RGCGCY	1 cut(s)	123
BstHHI	GCGC	1 cut(s)	122
BstKTI	GATC	4 cut(s)	190, 394, 719, 1044
BstMBI	GATC	4 cut(s)	187, 391, 716, 1041
BstMCI	CGRYCG	1 cut(s)	222
BstMWI	GCNNNNNNNGC	9 cut(s)	138, 224, 266, 288, 439, 674, 857, 866, 1052
BstSCI	CCNGG	2 cut(s)	506, 507
BstSFI	CTRYAG	1 cut(s)	292
BstSLI	GKGCMC	1 cut(s)	357
BstUI	CGCG	2 cut(s)	218, 260
BstV1I	GCAGC	2 cut(s)	872, 941
BstV2I	GAAGAC	1 cut(s)	399
BstX2I	RGATCY	1 cut(s)	716
BstYI	RGATCY	1 cut(s)	716
BstZI	CGGCCG	1 cut(s)	219
Bsu15I	ATCGAT	1 cut(s)	944
BsuRI	GGCC	2 cut(s)	221, 378
BsuTUI	ATCGAT	1 cut(s)	944
BtgI	CCRYGG	2 cut(s)	39, 864
BtgZI	GCGATG	1 cut(s)	199
BtrI	CACGTC	1 cut(s)	184
BtsCI	GGATG	3 cut(s)	14, 630, 837
BtsI	GCAGTG	2 cut(s)	119, 782
BtsIMutI	CAGTG	3 cut(s)	119, 174, 782
Cac8I	GCNNGC	3 cut(s)	258, 420, 893
CfoI	GCGC	1 cut(s)	122
Cfr10I	RCCGGY	1 cut(s)	856
Cfr13I	GGNCC	2 cut(s)	377, 854
Cfr9I	CCCGGG	1 cut(s)	507
ClaI	ATCGAT	1 cut(s)	944
CpoI	CGGWCCG	1 cut(s)	854
Csp6I	GTAC	2 cut(s)	373, 744
CspI	CGGWCCG	1 cut(s)	854
CviAII	CATG	9 cut(s)	40, 550, 730, 757, 766, 778, 865, 896, 983
CviQI	GTAC	2 cut(s)	373, 744
DdeI	CTNAG	1 cut(s)	108
DinI	GGCGCC	1 cut(s)	121
DpnI	GATC	4 cut(s)	189, 393, 718, 1043
DpnII	GATC	4 cut(s)	187, 391, 716, 1041
EaeI	YGGCCR	1 cut(s)	219
EagI	CGGCCG	1 cut(s)	219
Eam1104I	CTCTTC	2 cut(s)	164, 490
EarI	CTCTTC	2 cut(s)	164, 490
EclXI	CGGCCG	1 cut(s)	219
Eco130I	CCWWGG	2 cut(s)	39, 864
Eco47I	GGWCC	1 cut(s)	854
Eco52I	CGGCCG	1 cut(s)	219
Eco88I	CYCGRG	1 cut(s)	507
EcoRI	GAATTC	1 cut(s)	170
EcoT14I	CCWWGG	2 cut(s)	39, 864
EgeI	GGCGCC	1 cut(s)	121
EheI	GGCGCC	1 cut(s)	121
ErhI	CCWWGG	2 cut(s)	39, 864
FaeI	CATG	9 cut(s)	43, 553, 733, 760, 769, 781, 868, 899, 986
FaqI	GGGAC	2 cut(s)	823, 1012
FatI	CATG	9 cut(s)	39, 549, 729, 756, 765, 777, 864, 895, 982
Fnu4HI	GCNGC	4 cut(s)	118, 219, 861, 930
FokI	GGATG	3 cut(s)	21, 637, 844
Fsp4HI	GCNGC	4 cut(s)	118, 219, 861, 930
FspBI	CTAG	1 cut(s)	476
GlaI	GCGC	1 cut(s)	121
GluI	GCNGC	4 cut(s)	118, 219, 861, 930
HaeII	RGCGCY	1 cut(s)	123
HaeIII	GGCC	2 cut(s)	221, 378
HapII	CCGG	5 cut(s)	508, 747, 852, 857, 1034
HhaI	GCGC	1 cut(s)	122
Hin1I	GRCGYC	1 cut(s)	120
Hin1II	CATG	9 cut(s)	43, 553, 733, 760, 769, 781, 868, 899, 986
Hin6I	GCGC	1 cut(s)	120
HinP1I	GCGC	1 cut(s)	120
HindIII	AAGCTT	1 cut(s)	310
HinfI	GANTC	2 cut(s)	628, 978
HpaII	CCGG	5 cut(s)	508, 747, 852, 857, 1034
HphI	GGTGA	3 cut(s)	139, 564, 911
Hpy166II	GTNNAC	2 cut(s)	22, 181
Hpy188III	TCNNGA	1 cut(s)	107
Hpy8I	GTNNAC	2 cut(s)	22, 181
Hpy99I	CGWCG	1 cut(s)	188
HpyAV	CCTTC	6 cut(s)	459, 585, 595, 730, 964, 1040
HpyCH4III	ACNGT	2 cut(s)	178, 439
HpyCH4IV	ACGT	3 cut(s)	164, 183, 910
HpyCH4V	TGCA	9 cut(s)	59, 324, 418, 644, 787, 895, 986, 1055, 1072
HpyF10VI	GCNNNNNNNGC	9 cut(s)	138, 224, 266, 288, 439, 674, 857, 866, 1052
HpyF3I	CTNAG	1 cut(s)	108
HpySE526I	ACGT	3 cut(s)	164, 183, 910
Hsp92I	GRCGYC	1 cut(s)	120
Hsp92II	CATG	9 cut(s)	43, 553, 733, 760, 769, 781, 868, 899, 986
HspAI	GCGC	1 cut(s)	120
KasI	GGCGCC	1 cut(s)	119
KpnI	GGTACC	1 cut(s)	747
Kzo9I	GATC	4 cut(s)	187, 391, 716, 1041
LmnI	GCTCC	1 cut(s)	83
Lsp1109I	GCAGC	2 cut(s)	872, 941
LweI	GCATC	1 cut(s)	214
MaeI	CTAG	1 cut(s)	476
MaeII	ACGT	3 cut(s)	164, 183, 910
MalI	GATC	4 cut(s)	189, 393, 718, 1043
MboI	GATC	4 cut(s)	187, 391, 716, 1041
MboII	GAAGA	7 cut(s)	26, 91, 136, 151, 399, 477, 766
MflI	RGATCY	1 cut(s)	716
MhlI	GDGCHC	4 cut(s)	258, 357, 563, 1001
MluCI	AATT	6 cut(s)	170, 334, 458, 657, 794, 1064
Mly113I	GGCGCC	1 cut(s)	120
MlyI	GAGTC	1 cut(s)	972
MmeI	TCCRAC	1 cut(s)	328
MnlI	CCTC	4 cut(s)	161, 706, 834, 961
MseI	TTAA	2 cut(s)	329, 725
MslI	CAYNNNNRTG	2 cut(s)	245, 900
MspI	CCGG	5 cut(s)	508, 747, 852, 857, 1034
MspR9I	CCNGG	2 cut(s)	508, 509
MvnI	CGCG	2 cut(s)	218, 260
MwoI	GCNNNNNNNGC	9 cut(s)	138, 224, 266, 288, 439, 674, 857, 866, 1052
NarI	GGCGCC	1 cut(s)	120
NciI	CCSGG	2 cut(s)	508, 509
NcoI	CCATGG	2 cut(s)	39, 864
NdeII	GATC	4 cut(s)	187, 391, 716, 1041
NlaIII	CATG	9 cut(s)	43, 553, 733, 760, 769, 781, 868, 899, 986
NlaIV	GGNNCC	4 cut(s)	45, 79, 121, 745
NspV	TTCGAA	2 cut(s)	168, 463
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 818
PfeI	GAWTC	1 cut(s)	628
PkrI	GCNGC	4 cut(s)	119, 220, 862, 931
PleI	GAGTC	1 cut(s)	972
PluTI	GGCGCC	1 cut(s)	123
PpsI	GAGTC	1 cut(s)	972
Ppu21I	YACGTR	1 cut(s)	911
PspN4I	GGNNCC	4 cut(s)	45, 79, 121, 745
PspPI	GGNCC	2 cut(s)	377, 854
PsuI	RGATCY	1 cut(s)	716
RsaI	GTAC	2 cut(s)	374, 745
RsaNI	GTAC	2 cut(s)	373, 744
RseI	CAYNNNNRTG	2 cut(s)	245, 900
Rsr2I	CGGWCCG	1 cut(s)	854
RsrII	CGGWCCG	1 cut(s)	854
SaqAI	TTAA	2 cut(s)	329, 725
SatI	GCNGC	4 cut(s)	118, 219, 861, 930
Sau3AI	GATC	4 cut(s)	187, 391, 716, 1041
Sau96I	GGNCC	2 cut(s)	377, 854
SchI	GAGTC	1 cut(s)	972
ScrFI	CCNGG	2 cut(s)	508, 509
SduI	GDGCHC	4 cut(s)	258, 357, 563, 1001
SfaNI	GCATC	1 cut(s)	214
SfcI	CTRYAG	1 cut(s)	292
SfoI	GGCGCC	1 cut(s)	121
SfuI	TTCGAA	2 cut(s)	168, 463
SinI	GGWCC	1 cut(s)	854
SmaI	CCCGGG	1 cut(s)	509
SmiMI	CAYNNNNRTG	2 cut(s)	245, 900
Sse9I	AATT	6 cut(s)	170, 334, 458, 657, 794, 1064
SsiI	CCGC	5 cut(s)	117, 130, 208, 218, 1002
SspDI	GGCGCC	1 cut(s)	119
SspI	AATATT	1 cut(s)	1011
SspMI	CTAG	1 cut(s)	476
StyD4I	CCNGG	2 cut(s)	506, 507
StyI	CCWWGG	2 cut(s)	39, 864
TaaI	ACNGT	2 cut(s)	178, 439
TaiI	ACGT	3 cut(s)	167, 186, 913
TaqI	TCGA	7 cut(s)	168, 186, 195, 463, 494, 734, 944
TasI	AATT	6 cut(s)	170, 334, 458, 657, 794, 1064
TauI	GCSGC	2 cut(s)	120, 221
TfiI	GAWTC	1 cut(s)	628
Tru1I	TTAA	2 cut(s)	329, 725
Tru9I	TTAA	2 cut(s)	329, 725
TscAI	CASTG	3 cut(s)	119, 181, 789
TseI	GCWGC	2 cut(s)	860, 929
TspDTI	ATGAA	9 cut(s)	202, 377, 566, 614, 640, 641, 766, 835, 946
TspGWI	ACGGA	1 cut(s)	70
TspMI	CCCGGG	1 cut(s)	507
TspRI	CASTG	3 cut(s)	119, 181, 789
VpaK11BI	GGWCC	1 cut(s)	854
XapI	RAATTY	4 cut(s)	170, 458, 794, 1064
XcmI	CCANNNNNNNNNTGG	1 cut(s)	763
XmaI	CCCGGG	1 cut(s)	507
XspI	CTAG	1 cut(s)	476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.