Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002228

Physical Location & Seq

Genomic Coordinates Forward (+)

44231432 .. 44235868

Gene Structure 4437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0291400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGCAGGCGATTACGAGGCGCGCTGGGCAGCGGTATCTGAATCCCTCATCGTCGCTCAAGTCAATCTACCCTCTCTCCGATCACCATTATGGAGCTGAGCGTCCCAAGTACGGATCTACCCTCGCCACTAAGGGAGTGGGGCACCTTGTACGCAAGGGCACGGGTGGAAGATCATCTGTTAGTGGCATCGTCGCTGCAGTTTTCGGATCTACTGGGTTCCTTGGTCGATATCTTGTACAACAACTCGCCAAAATGGGAAGCCAGGTATTAGTTCCGTTCCGTGGTTCTGAAGATTCCCATCGTCATCTCAAGTTGATGGGAGATTTGGGACAGATAGTACCAATGAAATACAATCCAAGAGATGAAAACTCAATTAAGGCAGTAATGGCGAAAGCTAATGTGGTTATCAATCTTATTGGTAGAGAGTATGAGACAAGAAACTTTAGCTTTGAGGAAGTGAATCATTCCATGGCTGAACAACTCGCAATGATTTCCAAAGAACATGGGGGTATCATGAGATTTATTCAAGTTTCTTGCTTAGGGGCATCTCCCTCATCACCATCCAGATATCTAAAGGCTAAAGCTGCTGCAGAGGGTGCTGTTTTAAGTGAACTACCAGAGGCCACAATTATGAGACCTGCTGTGATGATTGGTACAGAGGATCGAATTTTGAATCAGTGGGCCTGTGTTTCGAAAAAATATGGCTTTCTTCCACTTGTTGGGGATGGGTCTACCAGAATCCAACCTGTATATGTTGCTGATGTTGCTGGTGCAATTGTTTCTGCCCTGCAAGATGATGGCACAAGTATGGGAAAAGTTTATGAACTTGGTGGGCCTGAGGTCTATACAGTGCACCAATTGGCAGAAGTTATGTTTGACATGATCCGAGAATGGCCACACTACGTGAAGATTCCTCTCCCAATCGCTAAGGCAATTGCAATGCCACGAGAAATACTGCTTAAAAAAGTTCCATTCCCATTGCCGAATCCTGAAATCTTCAACCTCGATCAAATCCTTGCCCAAGCTTCAGATACAGTTGTCTCAGAAAATGCCTTGACTTTCAATGATCTTGGAATTCTTCCCCATAAGATCAAGGGCTACCCTATTGAGTTTCTTATCCAATATCGTAAGGGAGGCCCAAACTTTGGTTCTACAGTCAGTGAAAAAGTATCTCCAGATGCTTGGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009736 GO:0009739 GO:0009755 GO:0009787 GO:0009788 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016043 GO:0019219 GO:0019222 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071840 GO:0080090 GO:0097159 GO:0099402 GO:1901363 GO:1901419 GO:1901420 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905957 GO:1905958 GO:2000023 GO:2000026 GO:2000069 GO:2000112 GO:2000113 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05165 ko05203 map05165 map05203

Pfam Domains

Protein Families

CHDCT2 Chromo DUF1086 DUF1087 Helicase_C PHD SNF2_N

Protein Analysis

396

Amino Acids

43.31

Weight (kDa)

9.16

Isoelectric Point (pI)

35.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Epimerase	PF01370	66 - 277	2.5e-12	NAD dependent epimerase/dehydratase family
NmrA	PF05368	66 - 318	2.5e-07	NmrA-like family
NAD_binding_10	PF13460	69 - 265	3.9e-08	NAD(P)H-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25170 AT2G25170 AT2G25170 AT2G25170 AT4G31900 AT4G31900 AT4G31900
fragaria_vesca	FvH4_2g40920
malus_domestica	MD08G1058800.v1.1 MD15G1037700.v1.1
prunus_persica	Prupe.1G391600_v2.0.a1
pyrus_communis	pycom08g04860 pycom08g04870 pycom15g03490
rosa_chinensis	RchiOBHm_Chr3g0455421 RchiOBHm_Chr6g0299661
rosa_laevigata	RLG00000011399 RLG00000025364
rosa_multiflora	Rmu_co8019708.1_g000001 Rmu_co8099568.1_g000001 Rmu_sc0022216.1_g000002 Rmu_sc0024261.1_g000001 Rmu_sc0024262.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424300 Rroxscaffold_7G00168470
rosa_rugosa	Rorug03G0007200 Rorug03G0007300 Rorug03G0007400 Rorug04G0013500 Rorug06G0291400
rosa_samantha	Rh3AG066700 Rh3BG069100 Rh3CG067500 Rh3DG069000 Rh5AG515500 Rh6AG402100 Rh6BG410600 Rh6CG416300 Rh6CG416400 Rh6DG403500
rosa_wichuraiana	Rw2G021110 Rw3G005270 Rw6G035200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	646
AccB1I	GGYRCC	1 cut(s)	141
AccB7I	CCANNNNNTGG	2 cut(s)	719, 1145
AccI	GTMKAC	1 cut(s)	731
AccII	CGCG	1 cut(s)	21
AciI	CCGC	1 cut(s)	31
AclWI	GGATC	4 cut(s)	121, 214, 669, 877
AcoI	YGGCCR	2 cut(s)	893, 1184
AcsI	RAATTY	2 cut(s)	666, 1074
AcuI	CTGAAG	2 cut(s)	309, 1011
AdeI	CACNNNGTG	1 cut(s)	904
AfaI	GTAC	5 cut(s)	110, 150, 237, 339, 655
AfiI	CCNNNNNNNGG	4 cut(s)	110, 281, 719, 1145
AgsI	TTSAA	4 cut(s)	527, 673, 1000, 1063
AjnI	CCWGG	1 cut(s)	261
AjuI	GAANNNNNNNTTGG	2 cut(s)	1132, 1164
AluBI	AGCT	5 cut(s)	95, 395, 447, 584, 1025
AluI	AGCT	5 cut(s)	95, 395, 447, 584, 1025
Alw21I	GWGCWC	1 cut(s)	855
Alw26I	GTCTC	3 cut(s)	425, 628, 1045
Alw44I	GTGCAC	1 cut(s)	851
AlwI	GGATC	4 cut(s)	121, 214, 669, 877
AoxI	GGCC	6 cut(s)	621, 681, 833, 893, 1135, 1184
ApaLI	GTGCAC	1 cut(s)	851
ApeKI	GCWGC	4 cut(s)	28, 194, 584, 587
ApoI	RAATTY	2 cut(s)	666, 1074
AspLEI	GCGC	2 cut(s)	21, 23
AspS9I	GGNCC	3 cut(s)	681, 833, 1136
AsuHPI	GGTGA	2 cut(s)	74, 549
AsuII	TTCGAA	1 cut(s)	692
AxyI	CCTNAGG	1 cut(s)	837
BaeGI	GKGCMC	3 cut(s)	144, 161, 855
BaeI	ACNNNNGTAYC	2 cut(s)	1023, 1056
BalI	TGGCCA	2 cut(s)	895, 1186
BanI	GGYRCC	1 cut(s)	141
BauI	CACGAG	1 cut(s)	945
Bbv12I	GWGCWC	1 cut(s)	855
BbvI	GCAGC	4 cut(s)	40, 181, 571, 574
BccI	CCATC	5 cut(s)	306, 310, 568, 719, 791
BciT130I	CCWGG	1 cut(s)	263
BcoDI	GTCTC	3 cut(s)	425, 628, 1045
BfmI	CTRYAG	3 cut(s)	195, 588, 1152
BfuAI	ACCTGC	1 cut(s)	646
BisI	GCNGC	4 cut(s)	29, 195, 585, 588
BlpI	GCTNAGC	1 cut(s)	96
BlsI	GCNGC	4 cut(s)	30, 196, 586, 589
Bme1390I	CCNGG	1 cut(s)	263
BmgT120I	GGNCC	3 cut(s)	681, 833, 1136
BmiI	GGNNCC	2 cut(s)	143, 218
BmrFI	CCNGG	1 cut(s)	263
BmrI	ACTGGG	1 cut(s)	222
BmsI	GCATC	3 cut(s)	195, 554, 1168
BmuI	ACTGGG	1 cut(s)	222
BpmI	CTGGAG	1 cut(s)	1158
Bpu10I	CCTNAGC	2 cut(s)	538, 927
Bpu1102I	GCTNAGC	1 cut(s)	96
Bpu14I	TTCGAA	1 cut(s)	692
BpuEI	CTTGAG	2 cut(s)	41, 293
BsaAI	YACGTR	1 cut(s)	904
BsaBI	GATNNNNATC	1 cut(s)	297
BsaI	GGTCTC	1 cut(s)	628
BsaJI	CCNNGG	3 cut(s)	220, 280, 468
BsaXI	ACNNNNNCTCC	2 cut(s)	59, 89
Bsc4I	CCNNNNNNNGG	4 cut(s)	110, 281, 719, 1145
Bse1I	ACTGG	1 cut(s)	217
Bse21I	CCTNAGG	1 cut(s)	837
Bse3DI	GCAATG	3 cut(s)	492, 945, 977
Bse8I	GATNNNNATC	1 cut(s)	297
BseBI	CCWGG	1 cut(s)	263
BseDI	CCNNGG	3 cut(s)	220, 280, 468
BseGI	GGATG	2 cut(s)	560, 730
BseJI	GATNNNNATC	1 cut(s)	297
BseLI	CCNNNNNNNGG	4 cut(s)	110, 281, 719, 1145
BseMI	GCAATG	3 cut(s)	492, 945, 977
BseMII	CTCAG	3 cut(s)	87, 828, 1056
BseNI	ACTGG	1 cut(s)	217
BsePI	GCGCGC	1 cut(s)	19
BseSI	GKGCMC	3 cut(s)	144, 161, 855
BseXI	GCAGC	4 cut(s)	40, 181, 571, 574
BseYI	CCCAGC	1 cut(s)	23
Bsh1236I	CGCG	1 cut(s)	21
BshFI	GGCC	6 cut(s)	623, 683, 835, 895, 1137, 1186
BshNI	GGYRCC	1 cut(s)	141
BsiHKAI	GWGCWC	1 cut(s)	855
BslFI	GGGAC	2 cut(s)	87, 342
BslI	CCNNNNNNNGG	4 cut(s)	110, 281, 719, 1145
BsmAI	GTCTC	3 cut(s)	425, 628, 1045
BsmFI	GGGAC	2 cut(s)	87, 342
BsnI	GGCC	6 cut(s)	623, 683, 835, 895, 1137, 1186
Bso31I	GGTCTC	1 cut(s)	628
Bsp119I	TTCGAA	1 cut(s)	692
Bsp1286I	GDGCHC	3 cut(s)	144, 161, 855
Bsp1407I	TGTACA	1 cut(s)	235
Bsp143I	GATC	9 cut(s)	79, 113, 170, 206, 661, 882, 1006, 1066, 1089
Bsp1720I	GCTNAGC	1 cut(s)	96
Bsp19I	CCATGG	1 cut(s)	468
BspACI	CCGC	1 cut(s)	31
BspANI	GGCC	6 cut(s)	623, 683, 835, 895, 1137, 1186
BspCNI	CTCAG	3 cut(s)	88, 829, 1055
BspFNI	CGCG	1 cut(s)	21
BspHI	TCATGA	1 cut(s)	513
BspLI	GGNNCC	2 cut(s)	143, 218
BspMAI	CTGCAG	2 cut(s)	199, 592
BspMI	ACCTGC	1 cut(s)	646
BspPI	GGATC	4 cut(s)	121, 214, 669, 877
BspT104I	TTCGAA	1 cut(s)	692
BspT107I	GGYRCC	1 cut(s)	141
BspTNI	GGTCTC	1 cut(s)	628
BsrDI	GCAATG	3 cut(s)	492, 945, 977
BsrGI	TGTACA	1 cut(s)	235
BsrI	ACTGG	1 cut(s)	217
BssECI	CCNNGG	3 cut(s)	220, 280, 468
BssHII	GCGCGC	1 cut(s)	19
BssMI	GATC	9 cut(s)	79, 113, 170, 206, 661, 882, 1006, 1066, 1089
BssSI	CACGAG	1 cut(s)	945
BssT1I	CCWWGG	2 cut(s)	220, 468
Bst2BI	CACGAG	1 cut(s)	945
Bst2UI	CCWGG	1 cut(s)	263
Bst4CI	ACNGT	3 cut(s)	850, 1036, 1156
BstAPI	GCANNNNNTGC	1 cut(s)	596
BstAUI	TGTACA	1 cut(s)	235
BstBAI	YACGTR	1 cut(s)	904
BstBI	TTCGAA	1 cut(s)	692
BstC8I	GCNNGC	2 cut(s)	6, 21
BstDEI	CTNAG	6 cut(s)	96, 129, 538, 837, 927, 1042
BstDSI	CCRYGG	2 cut(s)	280, 468
BstF5I	GGATG	2 cut(s)	560, 730
BstFNI	CGCG	1 cut(s)	21
BstHHI	GCGC	2 cut(s)	21, 23
BstKTI	GATC	9 cut(s)	82, 116, 173, 209, 664, 885, 1009, 1069, 1092
BstMAI	GTCTC	3 cut(s)	425, 628, 1045
BstMBI	GATC	9 cut(s)	79, 113, 170, 206, 661, 882, 1006, 1066, 1089
BstMWI	GCNNNNNNNGC	5 cut(s)	25, 386, 584, 596, 764
BstNI	CCWGG	1 cut(s)	263
BstSCI	CCNGG	1 cut(s)	261
BstSFI	CTRYAG	3 cut(s)	195, 588, 1152
BstSLI	GKGCMC	3 cut(s)	144, 161, 855
BstUI	CGCG	1 cut(s)	21
BstV1I	GCAGC	4 cut(s)	40, 181, 571, 574
BstX2I	RGATCY	2 cut(s)	113, 206
BstXI	CCANNNNNNTGG	1 cut(s)	1182
BstYI	RGATCY	2 cut(s)	113, 206
Bsu36I	CCTNAGG	1 cut(s)	837
BsuRI	GGCC	6 cut(s)	623, 683, 835, 895, 1137, 1186
BtgI	CCRYGG	2 cut(s)	280, 468
BtsCI	GGATG	2 cut(s)	560, 730
BtsIMutI	CAGTG	3 cut(s)	683, 855, 1165
BveI	ACCTGC	1 cut(s)	646
Cac8I	GCNNGC	2 cut(s)	6, 21
CciI	TCATGA	1 cut(s)	513
CfoI	GCGC	2 cut(s)	21, 23
Cfr13I	GGNCC	3 cut(s)	681, 833, 1136
CseI	GACGC	1 cut(s)	89
Csp6I	GTAC	5 cut(s)	109, 149, 236, 338, 654
CviAII	CATG	5 cut(s)	469, 503, 514, 880, 1188
CviQI	GTAC	5 cut(s)	109, 149, 236, 338, 654
DdeI	CTNAG	6 cut(s)	96, 129, 538, 837, 927, 1042
DpnI	GATC	9 cut(s)	81, 115, 172, 208, 663, 884, 1008, 1068, 1091
DpnII	GATC	9 cut(s)	79, 113, 170, 206, 661, 882, 1006, 1066, 1089
DraIII	CACNNNGTG	1 cut(s)	904
EaeI	YGGCCR	2 cut(s)	893, 1184
Eco130I	CCWWGG	2 cut(s)	220, 468
Eco31I	GGTCTC	1 cut(s)	628
Eco32I	GATATC	2 cut(s)	230, 569
Eco57I	CTGAAG	2 cut(s)	309, 1011
Eco81I	CCTNAGG	1 cut(s)	837
EcoRI	GAATTC	1 cut(s)	1074
EcoRII	CCWGG	1 cut(s)	261
EcoRV	GATATC	2 cut(s)	230, 569
EcoT14I	CCWWGG	2 cut(s)	220, 468
ErhI	CCWWGG	2 cut(s)	220, 468
FaeI	CATG	5 cut(s)	472, 506, 517, 883, 1191
FaqI	GGGAC	2 cut(s)	87, 342
FatI	CATG	5 cut(s)	468, 502, 513, 879, 1187
FblI	GTMKAC	1 cut(s)	731
Fnu4HI	GCNGC	4 cut(s)	29, 195, 585, 588
FokI	GGATG	2 cut(s)	547, 737
Fsp4HI	GCNGC	4 cut(s)	29, 195, 585, 588
GlaI	GCGC	2 cut(s)	20, 22
GluI	GCNGC	4 cut(s)	29, 195, 585, 588
GsaI	CCCAGC	1 cut(s)	27
GsuI	CTGGAG	1 cut(s)	1158
HaeIII	GGCC	6 cut(s)	623, 683, 835, 895, 1137, 1186
HgaI	GACGC	1 cut(s)	89
HhaI	GCGC	2 cut(s)	21, 23
Hin1II	CATG	5 cut(s)	472, 506, 517, 883, 1191
Hin6I	GCGC	2 cut(s)	19, 21
HinP1I	GCGC	2 cut(s)	19, 21
HindIII	AAGCTT	1 cut(s)	1023
HinfI	GANTC	7 cut(s)	40, 293, 460, 673, 738, 910, 985
HphI	GGTGA	2 cut(s)	74, 549
Hpy166II	GTNNAC	3 cut(s)	611, 732, 853
Hpy188I	TCNGA	7 cut(s)	39, 79, 206, 289, 887, 1030, 1045
Hpy188III	TCNNGA	4 cut(s)	514, 564, 989, 1175
Hpy8I	GTNNAC	3 cut(s)	611, 732, 853
Hpy99I	CGWCG	2 cut(s)	55, 194
HpyCH4III	ACNGT	3 cut(s)	850, 1036, 1156
HpyCH4IV	ACGT	1 cut(s)	903
HpyCH4V	TGCA	7 cut(s)	4, 197, 590, 773, 790, 853, 938
HpyF10VI	GCNNNNNNNGC	5 cut(s)	25, 386, 584, 596, 764
HpyF3I	CTNAG	6 cut(s)	96, 129, 538, 837, 927, 1042
HpySE526I	ACGT	1 cut(s)	903
Hsp92II	CATG	5 cut(s)	472, 506, 517, 883, 1191
HspAI	GCGC	2 cut(s)	19, 21
Kzo9I	GATC	9 cut(s)	79, 113, 170, 206, 661, 882, 1006, 1066, 1089
LmnI	GCTCC	1 cut(s)	92
Lsp1109I	GCAGC	4 cut(s)	40, 181, 571, 574
LweI	GCATC	3 cut(s)	195, 554, 1168
MaeII	ACGT	1 cut(s)	903
MalI	GATC	9 cut(s)	81, 115, 172, 208, 663, 884, 1008, 1068, 1091
MboI	GATC	9 cut(s)	79, 113, 170, 206, 661, 882, 1006, 1066, 1089
MboII	GAAGA	6 cut(s)	180, 302, 701, 919, 988, 1070
MfeI	CAATTG	3 cut(s)	774, 857, 933
MflI	RGATCY	2 cut(s)	113, 206
MhlI	GDGCHC	3 cut(s)	144, 161, 855
MlsI	TGGCCA	2 cut(s)	895, 1186
MluCI	AATT	7 cut(s)	372, 627, 666, 774, 857, 933, 1074
MluNI	TGGCCA	2 cut(s)	895, 1186
MmeI	TCCRAC	1 cut(s)	766
Mox20I	TGGCCA	2 cut(s)	895, 1186
MscI	TGGCCA	2 cut(s)	895, 1186
MseI	TTAA	3 cut(s)	375, 605, 960
MslI	CAYNNNNRTG	3 cut(s)	87, 629, 806
Msp20I	TGGCCA	2 cut(s)	895, 1186
MspA1I	CMGCKG	1 cut(s)	31
MspR9I	CCNGG	1 cut(s)	263
MunI	CAATTG	3 cut(s)	774, 857, 933
MvaI	CCWGG	1 cut(s)	263
MvnI	CGCG	1 cut(s)	21
MwoI	GCNNNNNNNGC	5 cut(s)	25, 386, 584, 596, 764
NcoI	CCATGG	1 cut(s)	468
NdeII	GATC	9 cut(s)	79, 113, 170, 206, 661, 882, 1006, 1066, 1089
NlaIII	CATG	5 cut(s)	472, 506, 517, 883, 1191
NlaIV	GGNNCC	2 cut(s)	143, 218
NspV	TTCGAA	1 cut(s)	692
PagI	TCATGA	1 cut(s)	513
PauI	GCGCGC	1 cut(s)	19
PfeI	GAWTC	7 cut(s)	40, 293, 460, 673, 738, 910, 985
PflMI	CCANNNNNTGG	2 cut(s)	719, 1145
PkrI	GCNGC	4 cut(s)	30, 196, 586, 589
Ppu21I	YACGTR	1 cut(s)	904
Psp6I	CCWGG	1 cut(s)	261
PspFI	CCCAGC	1 cut(s)	23
PspGI	CCWGG	1 cut(s)	261
PspN4I	GGNNCC	2 cut(s)	143, 218
PspPI	GGNCC	3 cut(s)	681, 833, 1136
PstI	CTGCAG	2 cut(s)	199, 592
PsuI	RGATCY	2 cut(s)	113, 206
PteI	GCGCGC	1 cut(s)	19
RsaI	GTAC	5 cut(s)	110, 150, 237, 339, 655
RsaNI	GTAC	5 cut(s)	109, 149, 236, 338, 654
RseI	CAYNNNNRTG	3 cut(s)	87, 629, 806
SaqAI	TTAA	3 cut(s)	375, 605, 960
SatI	GCNGC	4 cut(s)	29, 195, 585, 588
Sau3AI	GATC	9 cut(s)	79, 113, 170, 206, 661, 882, 1006, 1066, 1089
Sau96I	GGNCC	3 cut(s)	681, 833, 1136
ScrFI	CCNGG	1 cut(s)	263
SduI	GDGCHC	3 cut(s)	144, 161, 855
SfaNI	GCATC	3 cut(s)	195, 554, 1168
SfcI	CTRYAG	3 cut(s)	195, 588, 1152
SfuI	TTCGAA	1 cut(s)	692
SmiMI	CAYNNNNRTG	3 cut(s)	87, 629, 806
SmlI	CTYRAG	2 cut(s)	56, 308
SmoI	CTYRAG	2 cut(s)	56, 308
Sse9I	AATT	7 cut(s)	372, 627, 666, 774, 857, 933, 1074
SsiI	CCGC	1 cut(s)	31
StyD4I	CCNGG	1 cut(s)	261
StyI	CCWWGG	2 cut(s)	220, 468
TaaI	ACNGT	3 cut(s)	850, 1036, 1156
TaiI	ACGT	1 cut(s)	906
TaqI	TCGA	4 cut(s)	226, 664, 692, 1005
TasI	AATT	7 cut(s)	372, 627, 666, 774, 857, 933, 1074
TatI	WGTACW	1 cut(s)	235
TfiI	GAWTC	7 cut(s)	40, 293, 460, 673, 738, 910, 985
Tru1I	TTAA	3 cut(s)	375, 605, 960
Tru9I	TTAA	3 cut(s)	375, 605, 960
TscAI	CASTG	3 cut(s)	683, 855, 1165
TseI	GCWGC	4 cut(s)	28, 194, 584, 587
TspDTI	ATGAA	3 cut(s)	359, 378, 837
TspGWI	ACGGA	3 cut(s)	126, 264, 269
TspRI	CASTG	3 cut(s)	683, 855, 1165
Van91I	CCANNNNNTGG	2 cut(s)	719, 1145
VneI	GTGCAC	1 cut(s)	851
XapI	RAATTY	2 cut(s)	666, 1074
XcmI	CCANNNNNNNNNTGG	1 cut(s)	133
XmiI	GTMKAC	1 cut(s)	731

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.