Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0002228

Physical Location & Seq

Genomic Coordinates Forward (+)

60055083 .. 60057907

Gene Structure 2825 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG416300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGAGTAGCTTGGTTGAGAGGCTGCGCACTAGATCAGACCGAAAGCCAATTTATAATATTGACGAGTCTGACGATGATGGTGATTTTGGGACTGGAAAACCTGGAAGAGCTCAGGAAAAGTTTGAGAAGATTGTTAGGACTGACGTGAAAGATAATTCCTGTCAAGCATGTGGGGAAAGCGAGAATCTTATGGAATGTGAGACATGCAACTTTGCATATCATGCTAAGTGTTTACTTCCCCCGTTAAAGGCTCCTCTCCCTGACAGCTGGCGATGTCCGGAATGTGTGAGCCCTCTGACTGACATCGACAAGATTCTGGATTGTGAAATGCGACCTACTGTGGCCGATGATAGTGACGCCTCAAAGCTGGGTTCAAAGCAAATTTTTGTTAAACAATATCTTGTGAAGTGGAAGGGATTATCATATCTACATTGCACATGGATTCCTGAGAAAGAATTTTTCAAAGCGTTCAAGACGTACCCACGTCTAAAGCAGAAGGTTAACAATTTCAATCGTCAAAGTACTTCAAATAATAACACAGATGATGAATTTGTTGCCATTCGACCCGAATGGACAACTGTTGATCGGATCCTTGCTTGCAGGGGCGACGATGAGAAGCAATATCTTGTAAAGTGGAAAGAACTTCCTTACGATGAATGCTATTGGGAGGTGGAGCCTGATATCTCGACATTTCAACCAGAAATAGAGAGATTCCATAAAATACAGTCTAGATCTCAGAAATTGTCTGGTAAGCAGAAGAGTAGTCTTAAAGATGCTCTTGAACCAAAAAAGAAGCAGAAAGAGTTTCAACAGTTCGAACACAGTCCTGAATTTCTTTCTGGAGGTACACTGCATCCCTATCAGCTTGAAGGTCTGAACTTCTTACGTTTCTCCTGGTCCAAACAAACTCATGTCATACTTGCAGACGAGATGGGACTTGGCAAAACTATACAGAGTATAGCTTTTTTAGCATCGCTCTTTGAAGAGAGAGTCTATCCACATCTAGTGGTGGCTCCACTTTCAACATTACGAAATTGGGAACGGGAATTTGCAACATGGGCACCTCAAATGAATGTTGTTATGTATGTTGGCTCTTCCCAAGCCCGTGCGGTCATACGTGAATACGAATTTTACTTCCCCAAAAATCACAAGAAGATCAAGAAAAAGAAATCTGGTCAGATCAGTGGGGAAAGCAAGCAAGATAGGATCAAGTTTGATGTCCTTCTCACATCATATGAGATGATTAACTTGGACTCTACATCACTGAAACCGATAAAGTGGGAGTGTATGATTGTTGATGAAGGGCATCGTCTCAAAAACAAGGATTCAAAATTGTTTTCATCATTACAGCAGTACTGGACTAATCATCGCACATTGCTGACTGGAACTCCTCTTCAGAACAATCTGGATGAACTTTTCATGCTTATGCACTTCCTCGATGCTGCCAAGGTGAGTATGAGCCACGCACTTTATGAAATTGAATTTAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009736 GO:0009739 GO:0009755 GO:0009787 GO:0009788 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016043 GO:0019219 GO:0019222 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071840 GO:0080090 GO:0097159 GO:0099402 GO:1901363 GO:1901419 GO:1901420 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905957 GO:1905958 GO:2000023 GO:2000026 GO:2000069 GO:2000112 GO:2000113 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05165 ko05203 map05165 map05203

Pfam Domains

Protein Families

CHDCT2 Chromo DUF1086 DUF1087 Helicase_C PHD SNF2_N

Protein Analysis

496

Amino Acids

57.75

Weight (kDa)

7.16

Isoelectric Point (pI)

43.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD	PF00628	54 - 95	2.6e-08	PHD-finger
Chromo	PF00385	115 - 155	6.2e-09	Chromo (CHRromatin Organisation MOdifier) domain
Chromo	PF00385	193 - 240	1.3e-13	Chromo (CHRromatin Organisation MOdifier) domain
ResIII	PF04851	283 - 464	3.2e-10	Type III restriction enzyme, res subunit
SNF2-rel_dom	PF00176	287 - 485	1.4e-53	SNF2-related domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25170 AT2G25170 AT2G25170 AT2G25170 AT4G31900 AT4G31900 AT4G31900
fragaria_vesca	FvH4_2g40920
malus_domestica	MD08G1058800.v1.1 MD15G1037700.v1.1
prunus_persica	Prupe.1G391600_v2.0.a1
pyrus_communis	pycom08g04860 pycom08g04870 pycom15g03490
rosa_chinensis	RchiOBHm_Chr3g0455421 RchiOBHm_Chr6g0299661
rosa_laevigata	RLG00000011399 RLG00000025364
rosa_multiflora	Rmu_co8019708.1_g000001 Rmu_co8099568.1_g000001 Rmu_sc0022216.1_g000002 Rmu_sc0024261.1_g000001 Rmu_sc0024262.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424300 Rroxscaffold_7G00168470
rosa_rugosa	Rorug03G0007200 Rorug03G0007300 Rorug03G0007400 Rorug04G0013500 Rorug06G0291400
rosa_samantha	Rh3AG066700 Rh3BG069100 Rh3CG067500 Rh3DG069000 Rh5AG515500 Rh6AG402100 Rh6BG410600 Rh6CG416300 Rh6CG416400 Rh6DG403500
rosa_wichuraiana	Rw2G021110 Rw3G005270 Rw6G035200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	54
Acc16I	TGCGCA	1 cut(s)	26
AccB1I	GGYRCC	1 cut(s)	1060
AccIII	TCCGGA	1 cut(s)	277
AciI	CCGC	1 cut(s)	1109
AclWI	GGATC	3 cut(s)	583, 596, 1214
AcoI	YGGCCR	1 cut(s)	342
AcsI	RAATTY	7 cut(s)	381, 455, 548, 830, 1046, 1127, 1481
AcuI	CTGAAG	1 cut(s)	1379
AcyI	GRCGYC	1 cut(s)	357
AfaI	GTAC	4 cut(s)	479, 523, 847, 1355
AfiI	CCNNNNNNNGG	1 cut(s)	247
AjiI	CACGTC	2 cut(s)	145, 485
AjnI	CCWGG	2 cut(s)	100, 893
AluBI	AGCT	7 cut(s)	9, 110, 267, 367, 865, 962, 1488
AluI	AGCT	7 cut(s)	9, 110, 267, 367, 865, 962, 1488
Alw21I	GWGCWC	1 cut(s)	112
Alw26I	GTCTC	2 cut(s)	194, 1316
AlwI	GGATC	3 cut(s)	583, 596, 1214
Aor13HI	TCCGGA	1 cut(s)	277
AoxI	GGCC	1 cut(s)	342
ApeKI	GCWGC	2 cut(s)	22, 1442
ApoI	RAATTY	7 cut(s)	381, 455, 548, 830, 1046, 1127, 1481
AspLEI	GCGC	1 cut(s)	27
AspS9I	GGNCC	1 cut(s)	897
AsuHPI	GGTGA	2 cut(s)	92, 1462
AsuII	TTCGAA	1 cut(s)	816
AvaII	GGWCC	1 cut(s)	897
BaeGI	GKGCMC	1 cut(s)	1063
BamHI	GGATCC	1 cut(s)	588
BanI	GGYRCC	1 cut(s)	1060
BanII	GRGCYC	2 cut(s)	112, 293
Bbv12I	GWGCWC	1 cut(s)	112
BbvI	GCAGC	2 cut(s)	9, 1429
BccI	CCATC	2 cut(s)	71, 925
BciT130I	CCWGG	2 cut(s)	102, 895
BcoDI	GTCTC	2 cut(s)	194, 1316
BfaI	CTAG	3 cut(s)	30, 729, 1004
BglII	AGATCT	1 cut(s)	731
BisI	GCNGC	2 cut(s)	23, 1443
BlsI	GCNGC	2 cut(s)	24, 1444
BmcAI	AGTACT	2 cut(s)	523, 1355
Bme1390I	CCNGG	2 cut(s)	102, 895
Bme18I	GGWCC	1 cut(s)	897
BmgBI	CACGTC	2 cut(s)	145, 485
BmgT120I	GGNCC	1 cut(s)	897
BmiI	GGNNCC	5 cut(s)	252, 590, 675, 1014, 1062
BmrFI	CCNGG	2 cut(s)	102, 895
BmsI	GCATC	5 cut(s)	763, 862, 980, 1315, 1429
BpmI	CTGGAG	1 cut(s)	861
Bpu10I	CCTNAGC	1 cut(s)	111
Bpu14I	TTCGAA	1 cut(s)	816
BsaAI	YACGTR	1 cut(s)	1118
BsaHI	GRCGYC	1 cut(s)	357
BsaJI	CCNNGG	1 cut(s)	1446
BsaWI	WCCGGW	1 cut(s)	277
BsaXI	ACNNNNNCTCC	2 cut(s)	1372, 1402
Bsc4I	CCNNNNNNNGG	1 cut(s)	247
Bse1I	ACTGG	3 cut(s)	97, 1361, 1387
Bse3DI	GCAATG	2 cut(s)	430, 1373
BseAI	TCCGGA	1 cut(s)	277
BseBI	CCWGG	2 cut(s)	102, 895
BseDI	CCNNGG	1 cut(s)	1446
BseGI	GGATG	2 cut(s)	853, 1414
BseLI	CCNNNNNNNGG	1 cut(s)	247
BseMI	GCAATG	2 cut(s)	430, 1373
BseMII	CTCAG	3 cut(s)	125, 438, 749
BseNI	ACTGG	3 cut(s)	97, 1361, 1387
BseRI	GAGGAG	2 cut(s)	243, 1380
BseSI	GKGCMC	1 cut(s)	1063
BseXI	GCAGC	2 cut(s)	9, 1429
BseYI	CCCAGC	1 cut(s)	367
BshFI	GGCC	1 cut(s)	344
BshNI	GGYRCC	1 cut(s)	1060
BsiHKAI	GWGCWC	1 cut(s)	112
BsiSI	CCGG	1 cut(s)	278
BslFI	GGGAC	2 cut(s)	103, 948
BslI	CCNNNNNNNGG	1 cut(s)	247
BsmAI	GTCTC	2 cut(s)	194, 1316
BsmBI	CGTCTC	1 cut(s)	1316
BsmFI	GGGAC	2 cut(s)	103, 948
BsmI	GAATGC	1 cut(s)	662
BsnI	GGCC	1 cut(s)	344
Bsp119I	TTCGAA	1 cut(s)	816
Bsp1286I	GDGCHC	3 cut(s)	112, 293, 1063
Bsp13I	TCCGGA	1 cut(s)	277
Bsp143I	GATC	7 cut(s)	32, 583, 588, 731, 1155, 1179, 1206
BspACI	CCGC	1 cut(s)	1109
BspANI	GGCC	1 cut(s)	344
BspCNI	CTCAG	3 cut(s)	124, 439, 748
BspEI	TCCGGA	1 cut(s)	277
BspLI	GGNNCC	5 cut(s)	252, 590, 675, 1014, 1062
BspPI	GGATC	3 cut(s)	583, 596, 1214
BspQI	GCTCTTC	2 cut(s)	100, 1099
BspT104I	TTCGAA	1 cut(s)	816
BspT107I	GGYRCC	1 cut(s)	1060
BsrDI	GCAATG	2 cut(s)	430, 1373
BsrI	ACTGG	3 cut(s)	97, 1361, 1387
BssECI	CCNNGG	1 cut(s)	1446
BssMI	GATC	7 cut(s)	32, 583, 588, 731, 1155, 1179, 1206
BssNI	GRCGYC	1 cut(s)	357
BssT1I	CCWWGG	1 cut(s)	1446
Bst2UI	CCWGG	2 cut(s)	102, 895
Bst4CI	ACNGT	5 cut(s)	340, 580, 726, 813, 824
Bst6I	CTCTTC	5 cut(s)	100, 752, 978, 1099, 1398
BstACI	GRCGYC	1 cut(s)	357
BstAPI	GCANNNNNTGC	1 cut(s)	221
BstBAI	YACGTR	1 cut(s)	1118
BstBI	TTCGAA	1 cut(s)	816
BstC8I	GCNNGC	3 cut(s)	269, 598, 1196
BstDEI	CTNAG	4 cut(s)	111, 225, 447, 735
BstF5I	GGATG	2 cut(s)	853, 1414
BstHHI	GCGC	1 cut(s)	27
BstKTI	GATC	7 cut(s)	35, 586, 591, 734, 1158, 1182, 1209
BstMAI	GTCTC	2 cut(s)	194, 1316
BstMBI	GATC	7 cut(s)	32, 583, 588, 731, 1155, 1179, 1206
BstMWI	GCNNNNNNNGC	3 cut(s)	221, 968, 1058
BstNI	CCWGG	2 cut(s)	102, 895
BstNSI	RCATGY	2 cut(s)	171, 207
BstSCI	CCNGG	2 cut(s)	100, 893
BstSLI	GKGCMC	1 cut(s)	1063
BstV1I	GCAGC	2 cut(s)	9, 1429
BstX2I	RGATCY	2 cut(s)	588, 731
BstYI	RGATCY	2 cut(s)	588, 731
BsuRI	GGCC	1 cut(s)	344
BtgZI	GCGATG	3 cut(s)	286, 957, 1352
BtrI	CACGTC	2 cut(s)	145, 485
BtsCI	GGATG	2 cut(s)	853, 1414
BtsI	GCAGTG	1 cut(s)	848
BtsIMutI	CAGTG	3 cut(s)	848, 1189, 1262
Cac8I	GCNNGC	3 cut(s)	269, 598, 1196
CfoI	GCGC	1 cut(s)	27
Cfr13I	GGNCC	1 cut(s)	897
CseI	GACGC	1 cut(s)	365
Csp6I	GTAC	4 cut(s)	478, 522, 846, 1354
CviAII	CATG	7 cut(s)	168, 204, 221, 438, 911, 1056, 1420
CviQI	GTAC	4 cut(s)	478, 522, 846, 1354
DdeI	CTNAG	4 cut(s)	111, 225, 447, 735
DpnI	GATC	7 cut(s)	34, 585, 590, 733, 1157, 1181, 1208
DpnII	GATC	7 cut(s)	32, 583, 588, 731, 1155, 1179, 1206
EaeI	YGGCCR	1 cut(s)	342
Eam1104I	CTCTTC	5 cut(s)	100, 752, 978, 1099, 1398
EarI	CTCTTC	5 cut(s)	100, 752, 978, 1099, 1398
Ecl136II	GAGCTC	1 cut(s)	110
Eco130I	CCWWGG	1 cut(s)	1446
Eco24I	GRGCYC	2 cut(s)	112, 293
Eco32I	GATATC	1 cut(s)	682
Eco47I	GGWCC	1 cut(s)	897
Eco53kI	GAGCTC	1 cut(s)	110
Eco57I	CTGAAG	1 cut(s)	1379
EcoICRI	GAGCTC	1 cut(s)	110
EcoRII	CCWGG	2 cut(s)	100, 893
EcoRV	GATATC	1 cut(s)	682
EcoT14I	CCWWGG	1 cut(s)	1446
EcoT38I	GRGCYC	2 cut(s)	112, 293
ErhI	CCWWGG	1 cut(s)	1446
Esp3I	CGTCTC	1 cut(s)	1316
FaeI	CATG	7 cut(s)	171, 207, 224, 441, 914, 1059, 1423
FalI	AAGNNNNNCTT	2 cut(s)	762, 794
FaqI	GGGAC	2 cut(s)	103, 948
FatI	CATG	7 cut(s)	167, 203, 220, 437, 910, 1055, 1419
FauNDI	CATATG	1 cut(s)	1234
Fnu4HI	GCNGC	2 cut(s)	23, 1443
FokI	GGATG	2 cut(s)	840, 1421
FriOI	GRGCYC	2 cut(s)	112, 293
Fsp4HI	GCNGC	2 cut(s)	23, 1443
FspBI	CTAG	3 cut(s)	30, 729, 1004
FspI	TGCGCA	1 cut(s)	26
GlaI	GCGC	1 cut(s)	26
GluI	GCNGC	2 cut(s)	23, 1443
GsaI	CCCAGC	1 cut(s)	371
GsuI	CTGGAG	1 cut(s)	861
HaeIII	GGCC	1 cut(s)	344
HapII	CCGG	1 cut(s)	278
HgaI	GACGC	1 cut(s)	365
HhaI	GCGC	1 cut(s)	27
Hin1I	GRCGYC	1 cut(s)	357
Hin1II	CATG	7 cut(s)	171, 207, 224, 441, 914, 1059, 1423
Hin6I	GCGC	1 cut(s)	25
HinP1I	GCGC	1 cut(s)	25
HincII	GTYRAC	1 cut(s)	502
HindII	GTYRAC	1 cut(s)	502
HinfI	GANTC	8 cut(s)	65, 184, 313, 442, 711, 990, 1253, 1325
HpaI	GTTAAC	1 cut(s)	502
HpaII	CCGG	1 cut(s)	278
HphI	GGTGA	2 cut(s)	92, 1462
Hpy166II	GTNNAC	3 cut(s)	233, 502, 848
Hpy188I	TCNGA	8 cut(s)	37, 70, 297, 588, 738, 876, 1179, 1398
Hpy8I	GTNNAC	3 cut(s)	233, 502, 848
Hpy99I	CGWCG	1 cut(s)	611
HpyAV	CCTTC	5 cut(s)	406, 490, 863, 1232, 1295
HpyCH4III	ACNGT	5 cut(s)	340, 580, 726, 813, 824
HpyCH4IV	ACGT	5 cut(s)	144, 476, 484, 886, 1117
HpyCH4V	TGCA	8 cut(s)	207, 215, 435, 600, 853, 923, 1052, 1429
HpyF10VI	GCNNNNNNNGC	3 cut(s)	221, 968, 1058
HpyF3I	CTNAG	4 cut(s)	111, 225, 447, 735
HpySE526I	ACGT	5 cut(s)	144, 476, 484, 886, 1117
Hsp92I	GRCGYC	1 cut(s)	357
Hsp92II	CATG	7 cut(s)	171, 207, 224, 441, 914, 1059, 1423
HspAI	GCGC	1 cut(s)	25
Kpn2I	TCCGGA	1 cut(s)	277
KspAI	GTTAAC	1 cut(s)	502
Kzo9I	GATC	7 cut(s)	32, 583, 588, 731, 1155, 1179, 1206
LguI	GCTCTTC	2 cut(s)	100, 1099
LmnI	GCTCC	3 cut(s)	256, 673, 1018
Lsp1109I	GCAGC	2 cut(s)	9, 1429
LweI	GCATC	5 cut(s)	763, 862, 980, 1315, 1429
MaeI	CTAG	3 cut(s)	30, 729, 1004
MaeII	ACGT	5 cut(s)	144, 476, 484, 886, 1117
MaeIII	GTNAC	1 cut(s)	353
MalI	GATC	7 cut(s)	34, 585, 590, 733, 1157, 1181, 1208
MboI	GATC	7 cut(s)	32, 583, 588, 731, 1155, 1179, 1206
MboII	GAAGA	7 cut(s)	117, 139, 769, 995, 1086, 1165, 1385
MflI	RGATCY	2 cut(s)	588, 731
MhlI	GDGCHC	3 cut(s)	112, 293, 1063
MlyI	GAGTC	3 cut(s)	74, 999, 1247
MnlI	CCTC	9 cut(s)	12, 264, 303, 370, 661, 836, 1074, 1401, 1445
MroI	TCCGGA	1 cut(s)	277
MseI	TTAA	5 cut(s)	245, 390, 501, 768, 1245
MslI	CAYNNNNRTG	1 cut(s)	1424
MspA1I	CMGCKG	1 cut(s)	267
MspI	CCGG	1 cut(s)	278
MspR9I	CCNGG	2 cut(s)	102, 895
Mva1269I	GAATGC	1 cut(s)	662
MvaI	CCWGG	2 cut(s)	102, 895
MwoI	GCNNNNNNNGC	3 cut(s)	221, 968, 1058
NdeI	CATATG	1 cut(s)	1234
NdeII	GATC	7 cut(s)	32, 583, 588, 731, 1155, 1179, 1206
NlaIII	CATG	7 cut(s)	171, 207, 224, 441, 914, 1059, 1423
NlaIV	GGNNCC	5 cut(s)	252, 590, 675, 1014, 1062
NmuCI	GTSAC	1 cut(s)	353
NsbI	TGCGCA	1 cut(s)	26
NspI	RCATGY	2 cut(s)	171, 207
NspV	TTCGAA	1 cut(s)	816
PciSI	GCTCTTC	2 cut(s)	100, 1099
PcsI	WCGNNNNNNNCGW	1 cut(s)	69
PctI	GAATGC	1 cut(s)	662
PfeI	GAWTC	5 cut(s)	184, 313, 442, 711, 1325
PkrI	GCNGC	2 cut(s)	24, 1444
PleI	GAGTC	3 cut(s)	73, 998, 1247
PpsI	GAGTC	3 cut(s)	73, 998, 1247
Ppu21I	YACGTR	1 cut(s)	1118
PsiI	TTATAA	1 cut(s)	54
Psp124BI	GAGCTC	1 cut(s)	112
Psp6I	CCWGG	2 cut(s)	100, 893
PspFI	CCCAGC	1 cut(s)	367
PspGI	CCWGG	2 cut(s)	100, 893
PspN4I	GGNNCC	5 cut(s)	252, 590, 675, 1014, 1062
PspPI	GGNCC	1 cut(s)	897
PsuI	RGATCY	2 cut(s)	588, 731
PvuII	CAGCTG	1 cut(s)	267
RsaI	GTAC	4 cut(s)	479, 523, 847, 1355
RsaNI	GTAC	4 cut(s)	478, 522, 846, 1354
RseI	CAYNNNNRTG	1 cut(s)	1424
SacI	GAGCTC	1 cut(s)	112
SapI	GCTCTTC	2 cut(s)	100, 1099
SaqAI	TTAA	5 cut(s)	245, 390, 501, 768, 1245
SatI	GCNGC	2 cut(s)	23, 1443
Sau3AI	GATC	7 cut(s)	32, 583, 588, 731, 1155, 1179, 1206
Sau96I	GGNCC	1 cut(s)	897
ScaI	AGTACT	2 cut(s)	523, 1355
SchI	GAGTC	3 cut(s)	74, 999, 1247
ScrFI	CCNGG	2 cut(s)	102, 895
SduI	GDGCHC	3 cut(s)	112, 293, 1063
SfaNI	GCATC	5 cut(s)	763, 862, 980, 1315, 1429
SfuI	TTCGAA	1 cut(s)	816
SinI	GGWCC	1 cut(s)	897
SmiMI	CAYNNNNRTG	1 cut(s)	1424
SsiI	CCGC	1 cut(s)	1109
SspI	AATATT	1 cut(s)	58
SspMI	CTAG	3 cut(s)	30, 729, 1004
SstI	GAGCTC	1 cut(s)	112
StyD4I	CCNGG	2 cut(s)	100, 893
StyI	CCWWGG	1 cut(s)	1446
TaaI	ACNGT	5 cut(s)	340, 580, 726, 813, 824
TaiI	ACGT	5 cut(s)	147, 479, 487, 889, 1120
TaqI	TCGA	5 cut(s)	306, 562, 686, 816, 1437
TaqII	GACCGA	1 cut(s)	54
TatI	WGTACW	2 cut(s)	521, 1353
TfiI	GAWTC	5 cut(s)	184, 313, 442, 711, 1325
Tru1I	TTAA	5 cut(s)	245, 390, 501, 768, 1245
Tru9I	TTAA	5 cut(s)	245, 390, 501, 768, 1245
TscAI	CASTG	3 cut(s)	855, 1189, 1269
TseFI	GTSAC	1 cut(s)	353
TseI	GCWGC	2 cut(s)	22, 1442
Tsp45I	GTSAC	1 cut(s)	353
TspDTI	ATGAA	8 cut(s)	561, 669, 1085, 1314, 1329, 1408, 1425, 1488
TspRI	CASTG	3 cut(s)	855, 1189, 1269
VpaK11BI	GGWCC	1 cut(s)	897
XapI	RAATTY	7 cut(s)	381, 455, 548, 830, 1046, 1127, 1481
XbaI	TCTAGA	1 cut(s)	728
XceI	RCATGY	2 cut(s)	171, 207
XspI	CTAG	3 cut(s)	30, 729, 1004
ZrmI	AGTACT	2 cut(s)	523, 1355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.