FvH4_4g10780

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
14470878 .. 14477339
6462 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g10780.t1

Sequence Viewer

Length: 4521 bp
ATGGAGCCTTTTGATTCATCACTGCTTCACACAGTCTCTGCCTTCATGTCTTCAGGTACCGATTTCCTTGTCAAACCCATCTTCATTCGTGGGTTTTCTGGTTCTTTACATCTCCTTGTCTTGTTTGTGTTGCTTATCTCTTGGTTGTGGAACAAATTCAAGGTGGGTGATGGGGGAGGGGACCCAAAAGAGCGGTTTAGGAATAGTGCGACTCTCTACTATAGGAACACTCTTATCTGTTGTCTTGCTGTTTCTGCTATTAGTCTTGTCTTTTGTCTCTTCAACTACTTTTCCTGGTGCAAACATGGCTGGTCTCAAGAAAAGATAGTGACCCTTTTTGATTTAGCAATTAGAACACTTAGTTGGGGTGCAGTTTTTGTTTACTTGCATACCCACTTCTCTAGTTCTGCTGAATCAAAGTTTCCATTCTTACTCAGAGTTTGGTGGGGTTTCTACTTTTCCTTATCTTGCTATTGCCTTGTCATAGACCTTGTTCTTTACCATAAACACGTCCCTTTACCTGTTCAATCTTTAGTTTCTGATGCCGCCTTCCTTGTCTCTGCTTTGTTCTTTACATATGTCGGGTTTATTAGGACGAAAGAGGGTAGAGATAGCCTTCTTGAGGAGCCCCTTTTGAATGGTGCTACAAATTCTAGTATAGGTGACACTGCAGAATCAGACAAGTCTAAAGGGGATGCAACTGTGAACACCCCTTATTCAAATGCTGGCATTTTCAGCATCCTCACCTTCTCTTGGATGAGTCCTTTAATTGCGGTGGGCAATAAGAAAACATTAGACCTTGAAGATGTTCCTGAACTTGGCAAGGCTGATAGTGTAGTTGGGTCATATCCTGTTTTTAGAAATAGGCTCGAGTCCGAGTGTGGTACTCTTAGCAGAGTTACAACACTTCACCTGGTGAAGGCATTGATATTCTCGGCCTGGAGAGAGATTCTTTGGACTGCTCTCTTTGTGCTTCTTTACACAATGGCTTCTTATGTTGGCCCATATCTAATCGACACATTTGTGCAATACCTCTATGGGCGGCGTGAGTTTGAATATGAGGGCTATGCTTTAGTTTCCACATTTTTGGTGGCGAAGCTCGTGGAGTGCCTCAGTCAGAGGCACTGGTTCTTTAGGGCGCAGCAGATAGGAGTTAGAATAAGAGCTGTACTTGTTGCCATGATCTATAATAAGGGTTTGACCCTATCATGCCAGTCCAAGCAGTGTCACACTAGTGGTGAGATTATCAATTTTATGACTGTTGATGCTGAGAGGGTAGGCGACTTCACTTGGTATATGCATGACCCATGGATGGTCCTTCTACAAGTTGCTTTAGCACTCTTGATTTTGTATAAAAATCTTGGCCTTGCTGCAATTGCAACTTTAGTTGCAACAATACTTGTTATGTTGGCAAATGTTCCTCTGGGGAAATTGCAAGAGAAGTTTCAGGACAAGTTAATGGAGTCAAAGGACAGAAGGATGAAGGCAACATCGGAGATCTTAAGGAACATGCGGATTCTCAAGCTGCAGGCATGGGAGATGAAGTTTTTGTCAAAGATTATTGACCTCAGAAAGACTGAAACAGGATGGTTACGAAAGTTTGTTTATACTTCGGCCATGACCTCATTTGTCTTCTGGGGTGCACCCACATTTGTGTCTGTGGTCACTTTTGTTGCTTGCATGCTTTTAGGGATCCCACTGGAATCAGGAAAGATCTTATCTGCTCTTGCAACATTTAGAATTCTTCAAGAGCCCATCTACAGTCTTCCGGACACAATTTCAATGATAGCACAGACAAAGGTATCCCTTGATAGAATTGCATCATTCCTTTCTCTTGATGAGTTGAAGCCTGATGTTGTAGAGAGCCTTCCTAGAGGTAGTTCTGATACTGCAATTGAGATATTAGATGCAAATTTCGCTTGGGAATTATCTTTGCCTAGCCCTACATTGAAGAATATAAGTCTGAAAGTAAGCCATGGTATGAAGGTTGCTGTTTGTGGTACTGTTGGCTCAGGCAAATCAAGCTTACTTTCTTGTATTCTGGGAGAAGTTCCCAAGATATCTGGGACTCTTAAGTTGTGTGGGACAAAGGCCTACGTTTCACAGTCACCATGGATACAGAGTGGTAAGATAGAACAAAACATATTGTTTGGTAAAGAGATGGATAGAGAAAGGTACGAGGGGGTTCTTGAAGCATGTTCATTGAAGAAGGACCTGGAAATTTTATCATTTGGTGATCAGACTGTTATAGGGGAGAGGGGAATCAATTTAAGTGGAGGTCAGAAGCAAAGAATACAAATTGCACGAGCTTTGTACCAAGATGCTGATATCTATCTGTTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGATCTCACCTTTTCAAGGAATGCTTGATGGGCCTCTTGTGTTCCAAAACAGTAATCTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATTTTGGTCATGAAAGACGGAAAGATTACTCAAGCTGGAAAGTTCAATGACATTCTTAATTCAGGAACTGATTTTATGGATCTTGTGGGAGCACACAATGAAGCTTTGTCTGCGCTTGATTCAGTTAGGGTAGGGCCGGTTGAAAAAACAAGCATCAGCAAAGAAAATAATGATTCGGCTAGTACTACTGGGTCTGTTCCGAAAGTAGACAACAGAGATGACCAAGATAGTAAAACAGATGTAGGTGTGCCAAAAGCGCAGCTTGTTCAAGATGAAGAGAGAGAGAAAGGTAAGGTTGGGTTTTCAGTGTATTGGAAATACATTACCACAGCGTATGGAGGAGCTCTCGTGCCTTTTATATTACTTGCACAGATTCTCTTTCAACTCCTTCAAATTGGAAGCAATTACTGGATGGCTTGGGCAACTCCTGTGTCAGAAGACGTGAAACCAACTGTTACAAGCTCTACACTTATAATTGTCTATGTGGCATTGGCTGTTGGAAGTTCGTTTTGTGTCCTTTTTAGAGCTCTGCTTCTTGTAACGGCGGGGTACAAGACAGCCACTATACTCTTCAATAAAATGCACTTGTGCATATTCCGTGCTCCCATGTCATTCTTTGATGCCACTCCAAGTGGACGAATCTTAAACAGAGCTTCTACAGACCAAAATGCAGTAGACATGAACATTTCAAATCAAGTTGCTGCCTTTGCCTTCTCCATGATACAGCTTTTAGGAATTATTGCAGTGATGTCACAGGTGGCATGGCAGGTTTTCATCATATTTATACCTGTGATCACAGCCTGTGTTTGGTATCAGCAATATTACATATCTTCAGCACGAGAACTAGCAAGATTGGTTGGAGTATGCAAAGCTCCTGTGATACAACATTTTGCCGAAACAATTTCAGGCTCAACTACTATTAGGAGCTTCGATCAAGAATCTAGATTCCGAGATACCAACATGAAGCTGATGGATGGATATGGTCGGCCAAAGTTCTACACTGCTGGTGCAATGGAATGGCTATGCTTTCGCTTGGATGTATTGTCATCCATTACATTTGCATTCTGTTTAGTTTTCTTGATCTCTGTTCCAGAAGGAGTGATAGATCCAGGCATTGCGGGCTTAGCCGTTACATATGGACTTAACCTAAATATGTTACAAGCTTGGGTTATATGGAATCTTTGCAACATGGAGAACAGGATAATATCTGTGGAGAGAATACTACAATATACTACTAGCATACCAAGTGAGCCGCCTCTGGTAATAGAGTCTAATAGACCAGATCATTCCTGGCCATCACAAGGAAAAGTTCATATGCATGAACTTCAGGTGCGGTATGCTCCACACATGCCACTTGTGTTGCGAGGTCTCACATGTACCTTCCCTGGAGGAATGAAAACTGGGATCGTGGGAAGAACTGGCAGTGGAAAGTCAACTCTTATACAAACTCTTTTCCGAATAGTTGATCCTGCTGCTGGCCGGATTTTGATAGATGGCATCGATATCTCTTCTATTGGCTTGCATGATCTGCGGTCTAAGCTAAGCATTATCCCTCAGGACCCAACCATGTTTGAAGGAACTGTGAGAAGCAACCTGGACCCACTCGAAGAGTATACAGATGAACAAATTTGGGAGGCCCTGGATAAGTGCCAACTTGGAGATGAAGTTAGGAAGAAAGAAGGGAAGCTTGATTCTGCAGTTAGTGAAAATGGAGAGAACTGGAGTATGGGTCAGAGGCAGCTGGTTTGCCTTGGCCGTGTGCTCCTCAAGAAAAGTAAAGTCCTGGTGCTTGACGAAGCTACTGCCTCTGTTGATACTGCTACGGATAATTTGATACAGCAGACTCTTCGGCATCACTTTTCAGACTCTACTGTCATAACTATTGCACATCGAATAACTTCTGTTCTTGACAGTGACATGGTCCTACTTCTAAGTCATGGACTCATTGAAGAATGTGATTCTCCTTCAAGATTGCTAGAAAACAAGTTATCATCTTTTGCCCAACTTGTAGCAGAGTACACAATGAGATCCAGCTCCACTTTTGAGTAG

Protein Analysis

1507

Amino Acids

167.68

Weight (kDa)

6.42

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 322 - 585 1.9e-21 ABC transporter transmembrane region
ABC_tran PF00005 650 - 784 1.4e-20 ABC transporter
ABC_membrane PF00664 943 - 1185 9.3e-29 ABC transporter transmembrane region
ABC_tran PF00005 1278 - 1426 7.8e-28 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2945
AasI GACNNNNNNGTC 1 cut(s) 4343
Acc36I ACCTGC 2 cut(s) 2467, 3229
Acc65I GGTACC 1 cut(s) 56
AccB1I GGYRCC 1 cut(s) 56
AccBSI CCGCTC 1 cut(s) 193
AccI GTMKAC 3 cut(s) 2679, 3147, 4085
AccIII TCCGGA 1 cut(s) 1768
AclWI GGATC 9 cut(s) 1687, 1700, 2339, 2383, 2559, 3572, 3884, 3932, 4494
AcoI YGGCCR 5 cut(s) 1614, 3458, 3764, 3949, 4225
AcsI RAATTY 6 cut(s) 155, 649, 1740, 1912, 2220, 4098
AcuI CTGAAG 3 cut(s) 36, 3288, 3782
AdeI CACNNNGTG 1 cut(s) 916
AflII CTTAAG 2 cut(s) 1501, 2072
AflIII ACRYGT 2 cut(s) 508, 3845
AhlI ACTAGT 1 cut(s) 1232
AjiI CACGTC 2 cut(s) 511, 2914
AjuI GAANNNNNNNTTGG 2 cut(s) 346, 378
AleI CACNNNNGTG 3 cut(s) 1022, 1233, 1652
Alw21I GWGCWC 6 cut(s) 1645, 2566, 2818, 3001, 3076, 4236
Alw26I GTCTC 5 cut(s) 40, 281, 318, 562, 3845
Alw44I GTGCAC 1 cut(s) 1641
AlwI GGATC 9 cut(s) 1687, 1700, 2339, 2383, 2559, 3572, 3884, 3932, 4494
AlwNI CAGNNNCTG 2 cut(s) 38, 2540
Ama87I CYCGRG 1 cut(s) 869
Aor13HI TCCGGA 1 cut(s) 1768
ApaLI GTGCAC 1 cut(s) 1641
ApeKI GCWGC 8 cut(s) 1141, 1370, 1525, 2462, 2731, 3173, 3944, 4210
ApoI RAATTY 6 cut(s) 155, 649, 1740, 1912, 2220, 4098
Asp700I GAANNNNTTC 3 cut(s) 155, 807, 4369
Asp718I GGTACC 1 cut(s) 56
AspLEI GCGC 3 cut(s) 1141, 2587, 2731
AsuHPI GGTGA 9 cut(s) 179, 674, 736, 902, 928, 1250, 2100, 2246, 2372
AvaI CYCGRG 1 cut(s) 869
AvaII GGWCC 6 cut(s) 181, 1315, 2212, 4030, 4069, 4393
AxyI CCTNAGG 1 cut(s) 4026
BaeGI GKGCMC 1 cut(s) 1645
BaeI ACNNNNGTAYC 2 cut(s) 1785, 1818
BalI TGGCCA 1 cut(s) 3766
BamHI GGATCC 1 cut(s) 1692
BanI GGYRCC 1 cut(s) 56
BanII GRGCYC 4 cut(s) 630, 1755, 2818, 3001
BarI GAAGNNNNNNTAC 2 cut(s) 1851, 1883
BauI CACGAG 4 cut(s) 1100, 2304, 2819, 3309
BbsI GAAGAC 4 cut(s) 42, 1624, 1757, 2916
Bbv12I GWGCWC 6 cut(s) 1645, 2566, 2818, 3001, 3076, 4236
BbvI GCAGC 8 cut(s) 1153, 1357, 1512, 2449, 2743, 3160, 3931, 4222
BceAI ACGGC 3 cut(s) 3030, 3584, 4212
BcgI CGANNNNNNTGC 4 cut(s) 4256, 4290, 4301, 4335
BciVI GTATCC 2 cut(s) 1813, 2109
BclI TGATCA 2 cut(s) 2236, 3264
BcoDI GTCTC 5 cut(s) 40, 281, 318, 562, 3845
BcuI ACTAGT 1 cut(s) 1232
BfmI CTRYAG 6 cut(s) 220, 669, 1526, 1759, 3129, 4167
BfrI CTTAAG 2 cut(s) 1501, 2072
BfuAI ACCTGC 2 cut(s) 2467, 3229
BfuI GTATCC 2 cut(s) 1813, 2109
BglII AGATCT 2 cut(s) 1497, 1713
BlpI GCTNAGC 2 cut(s) 3595, 4013
BmcAI AGTACT 1 cut(s) 2656
Bme18I GGWCC 6 cut(s) 181, 1315, 2212, 4030, 4069, 4393
BmeT110I CYCGRG 1 cut(s) 869
BmgBI CACGTC 2 cut(s) 511, 2914
BmiI GGNNCC 8 cut(s) 6, 58, 182, 183, 627, 1694, 4032, 4071
BmrI ACTGGG 2 cut(s) 2670, 3882
BmuI ACTGGG 2 cut(s) 2670, 3882
BpiI GAAGAC 4 cut(s) 42, 1624, 1757, 2916
BplI GAGNNNNNCTC 2 cut(s) 2802, 2834
BpmI CTGGAG 3 cut(s) 961, 3879, 4213
Bpu10I CCTNAGC 1 cut(s) 2011
Bpu1102I GCTNAGC 2 cut(s) 3595, 4013
BpuEI CTTGAG 5 cut(s) 300, 641, 1505, 2487, 4223
Bsa29I ATCGAT 1 cut(s) 3972
BsaBI GATNNNNATC 1 cut(s) 2331
BsaI GGTCTC 2 cut(s) 318, 3845
BsaJI CCNNGG 6 cut(s) 1307, 1975, 2111, 3856, 4110, 4222
BsaWI WCCGGW 1 cut(s) 1768
BsaXI ACNNNNNCTCC 8 cut(s) 1529, 1559, 2805, 2835, 4122, 4152, 4186, 4216
Bse118I RCCGGY 1 cut(s) 2608
Bse1I ACTGG 8 cut(s) 1130, 1213, 1704, 2665, 2885, 3877, 3895, 4196
Bse21I CCTNAGG 1 cut(s) 4026
Bse3DI GCAATG 2 cut(s) 3489, 3585
Bse8I GATNNNNATC 1 cut(s) 2331
BseAI TCCGGA 1 cut(s) 1768
BseCI ATCGAT 1 cut(s) 3972
BseDI CCNNGG 6 cut(s) 1307, 1975, 2111, 3856, 4110, 4222
BseJI GATNNNNATC 1 cut(s) 2331
BseMI GCAATG 2 cut(s) 3489, 3585
BseMII CTCAG 6 cut(s) 448, 1126, 1260, 1582, 2025, 4040
BseNI ACTGG 8 cut(s) 1130, 1213, 1704, 2665, 2885, 3877, 3895, 4196
BseRI GAGGAG 3 cut(s) 638, 2826, 4226
BseSI GKGCMC 1 cut(s) 1645
BseXI GCAGC 8 cut(s) 1153, 1357, 1512, 2449, 2743, 3160, 3931, 4222
BsgI GTGCAG 1 cut(s) 390
BshNI GGYRCC 1 cut(s) 56
BshVI ATCGAT 1 cut(s) 3972
BsiHKAI GWGCWC 6 cut(s) 1645, 2566, 2818, 3001, 3076, 4236
BsiHKCI CYCGRG 1 cut(s) 869
BsiSI CCGG 3 cut(s) 1769, 2609, 3952
BslFI GGGAC 4 cut(s) 194, 497, 2080, 2098
BsmAI GTCTC 5 cut(s) 40, 281, 318, 562, 3845
BsmFI GGGAC 4 cut(s) 194, 497, 2080, 2098
BsmI GAATGC 2 cut(s) 2399, 3533
Bso31I GGTCTC 2 cut(s) 318, 3845
BsoBI CYCGRG 1 cut(s) 869
Bsp1286I GDGCHC 8 cut(s) 630, 1645, 1755, 2566, 2818, 3001, 3076, 4236
Bsp13I TCCGGA 1 cut(s) 1768
Bsp1720I GCTNAGC 2 cut(s) 3595, 4013
Bsp19I CCATGG 3 cut(s) 1307, 1975, 2111
BspCNI CTCAG 6 cut(s) 447, 1125, 1261, 1581, 2024, 4039
BspDI ATCGAT 1 cut(s) 3972
BspEI TCCGGA 1 cut(s) 1768
BspHI TCATGA 1 cut(s) 2481
BspLI GGNNCC 8 cut(s) 6, 58, 182, 183, 627, 1694, 4032, 4071
BspMAI CTGCAG 3 cut(s) 673, 1530, 4171
BspMI ACCTGC 2 cut(s) 2467, 3229
BspPI GGATC 9 cut(s) 1687, 1700, 2339, 2383, 2559, 3572, 3884, 3932, 4494
BspT107I GGYRCC 1 cut(s) 56
BspTI CTTAAG 2 cut(s) 1501, 2072
BspTNI GGTCTC 2 cut(s) 318, 3845
BsrBI CCGCTC 1 cut(s) 193
BsrDI GCAATG 2 cut(s) 3489, 3585
BsrFI RCCGGY 1 cut(s) 2608
BsrI ACTGG 8 cut(s) 1130, 1213, 1704, 2665, 2885, 3877, 3895, 4196
BssAI RCCGGY 1 cut(s) 2608
BssECI CCNNGG 6 cut(s) 1307, 1975, 2111, 3856, 4110, 4222
BssNAI GTATAC 1 cut(s) 4086
BssSI CACGAG 4 cut(s) 1100, 2304, 2819, 3309
BssT1I CCWWGG 4 cut(s) 1307, 1975, 2111, 4222
Bst1107I GTATAC 1 cut(s) 4086
Bst2BI CACGAG 4 cut(s) 1100, 2304, 2819, 3309
Bst6I CTCTTC 6 cut(s) 284, 2742, 3047, 3985, 4074, 4323
BstAFI CTTAAG 2 cut(s) 1501, 2072
BstAPI GCANNNNNTGC 1 cut(s) 4000
BstC8I GCNNGC 7 cut(s) 727, 1530, 1678, 1682, 3592, 3949, 3992
BstDSI CCRYGG 3 cut(s) 1307, 1975, 2111
BstENI CCTNNNNNAGG 3 cut(s) 620, 917, 2387
BstHHI GCGC 3 cut(s) 1141, 2587, 2731
BstMAI GTCTC 5 cut(s) 40, 281, 318, 562, 3845
BstNSI RCATGY 5 cut(s) 1513, 1684, 2199, 3823, 3849
BstSFI CTRYAG 6 cut(s) 220, 669, 1526, 1759, 3129, 4167
BstSLI GKGCMC 1 cut(s) 1645
BstV1I GCAGC 8 cut(s) 1153, 1357, 1512, 2449, 2743, 3160, 3931, 4222
BstV2I GAAGAC 4 cut(s) 42, 1624, 1757, 2916
BstX2I RGATCY 7 cut(s) 1497, 1692, 1713, 2375, 2551, 3577, 4499
BstXI CCANNNNNNTGG 1 cut(s) 1087
BstYI RGATCY 7 cut(s) 1497, 1692, 1713, 2375, 2551, 3577, 4499
BstZ17I GTATAC 1 cut(s) 4086
Bsu15I ATCGAT 1 cut(s) 3972
Bsu36I CCTNAGG 1 cut(s) 4026
BsuI GTATCC 2 cut(s) 1813, 2109
BsuTUI ATCGAT 1 cut(s) 3972
BtgI CCRYGG 3 cut(s) 1307, 1975, 2111
BtrI CACGTC 2 cut(s) 511, 2914
BtsI GCAGTG 6 cut(s) 20, 666, 1229, 3222, 3471, 3901
BveI ACCTGC 2 cut(s) 2467, 3229
Cac8I GCNNGC 7 cut(s) 727, 1530, 1678, 1682, 3592, 3949, 3992
CaiI CAGNNNCTG 2 cut(s) 38, 2540
CciI TCATGA 1 cut(s) 2481
CfoI GCGC 3 cut(s) 1141, 2587, 2731
Cfr10I RCCGGY 1 cut(s) 2608
ClaI ATCGAT 1 cut(s) 3972
CsiI ACCWGGT 1 cut(s) 912
CspCI CAANNNNNGTGG 4 cut(s) 2254, 2289, 3813, 3848
DraIII CACNNNGTG 1 cut(s) 916
DrdI GACNNNNNNGTC 1 cut(s) 4343
DseDI GACNNNNNNGTC 1 cut(s) 4343
EaeI YGGCCR 5 cut(s) 1614, 3458, 3764, 3949, 4225
Eam1104I CTCTTC 6 cut(s) 284, 2742, 3047, 3985, 4074, 4323
EarI CTCTTC 6 cut(s) 284, 2742, 3047, 3985, 4074, 4323
Ecl136II GAGCTC 2 cut(s) 2816, 2999
Eco130I CCWWGG 4 cut(s) 1307, 1975, 2111, 4222
Eco147I AGGCCT 1 cut(s) 2093
Eco24I GRGCYC 4 cut(s) 630, 1755, 2818, 3001
Eco31I GGTCTC 2 cut(s) 318, 3845
Eco32I GATATC 3 cut(s) 2061, 2329, 3976
Eco47I GGWCC 6 cut(s) 181, 1315, 2212, 4030, 4069, 4393
Eco53kI GAGCTC 2 cut(s) 2816, 2999
Eco57I CTGAAG 3 cut(s) 36, 3288, 3782
Eco81I CCTNAGG 1 cut(s) 4026
Eco88I CYCGRG 1 cut(s) 869
EcoICRI GAGCTC 2 cut(s) 2816, 2999
EcoNI CCTNNNNNAGG 3 cut(s) 620, 917, 2387
EcoO109I RGGNCCY 4 cut(s) 181, 2212, 4030, 4108
EcoRI GAATTC 1 cut(s) 1740
EcoRV GATATC 3 cut(s) 2061, 2329, 3976
EcoT14I CCWWGG 4 cut(s) 1307, 1975, 2111, 4222
EcoT22I ATGCAT 2 cut(s) 1302, 3792
EcoT38I GRGCYC 4 cut(s) 630, 1755, 2818, 3001
ErhI CCWWGG 4 cut(s) 1307, 1975, 2111, 4222
FalI AAGNNNNNCTT 6 cut(s) 2381, 2413, 2718, 2750, 4143, 4175
FaqI GGGAC 4 cut(s) 194, 497, 2080, 2098
FauI CCCGC 2 cut(s) 3010, 3583
FauNDI CATATG 3 cut(s) 577, 3607, 3786
FbaI TGATCA 2 cut(s) 2236, 3264
FblI GTMKAC 3 cut(s) 2679, 3147, 4085
FriOI GRGCYC 4 cut(s) 630, 1755, 2818, 3001
GlaI GCGC 3 cut(s) 1140, 2586, 2730
GsuI CTGGAG 3 cut(s) 961, 3879, 4213
HapII CCGG 3 cut(s) 1769, 2609, 3952
HhaI GCGC 3 cut(s) 1141, 2587, 2731
Hin6I GCGC 3 cut(s) 1139, 2585, 2729
HinP1I GCGC 3 cut(s) 1139, 2585, 2729
HincII GTYRAC 1 cut(s) 3906
HindII GTYRAC 1 cut(s) 3906
HindIII AAGCTT 4 cut(s) 2023, 2574, 3633, 4157
HpaII CCGG 3 cut(s) 1769, 2609, 3952
HphI GGTGA 9 cut(s) 179, 674, 736, 902, 928, 1250, 2100, 2246, 2372
Hpy166II GTNNAC 9 cut(s) 382, 706, 1643, 2680, 3107, 3148, 3906, 4086, 4491
Hpy8I GTNNAC 9 cut(s) 382, 706, 1643, 2680, 3107, 3148, 3906, 4086, 4491
HpyCH4IV ACGT 3 cut(s) 510, 2097, 2913
HpySE526I ACGT 3 cut(s) 510, 2097, 2913
HspAI GCGC 3 cut(s) 1139, 2585, 2729
KflI GGGWCCC 1 cut(s) 181
Kpn2I TCCGGA 1 cut(s) 1768
KpnI GGTACC 1 cut(s) 60
Ksp22I TGATCA 2 cut(s) 2236, 3264
Lsp1109I GCAGC 8 cut(s) 1153, 1357, 1512, 2449, 2743, 3160, 3931, 4222
MabI ACCWGGT 1 cut(s) 912
MaeII ACGT 3 cut(s) 510, 2097, 2913
MbiI CCGCTC 1 cut(s) 193
MfeI CAATTG 2 cut(s) 1374, 1893
MflI RGATCY 7 cut(s) 1497, 1692, 1713, 2375, 2551, 3577, 4499
MhlI GDGCHC 8 cut(s) 630, 1645, 1755, 2566, 2818, 3001, 3076, 4236
MlsI TGGCCA 1 cut(s) 3766
MluNI TGGCCA 1 cut(s) 3766
MlyI GAGTC 9 cut(s) 205, 769, 881, 1472, 2062, 3749, 4309, 4331, 4407
MmeI TCCRAC 2 cut(s) 2950, 3310
Mox20I TGGCCA 1 cut(s) 3766
Mph1103I ATGCAT 2 cut(s) 1302, 3792
MroI TCCGGA 1 cut(s) 1768
MroXI GAANNNNTTC 3 cut(s) 155, 807, 4369
MscI TGGCCA 1 cut(s) 3766
MseI TTAA 8 cut(s) 767, 1457, 1502, 2073, 2270, 2529, 3116, 3615
MslI CAYNNNNRTG 4 cut(s) 1022, 1233, 1652, 3789
Msp20I TGGCCA 1 cut(s) 3766
MspA1I CMGCKG 1 cut(s) 4213
MspCI CTTAAG 2 cut(s) 1501, 2072
MspI CCGG 3 cut(s) 1769, 2609, 3952
MunI CAATTG 2 cut(s) 1374, 1893
Mva1269I GAATGC 2 cut(s) 2399, 3533
NcoI CCATGG 3 cut(s) 1307, 1975, 2111
NdeI CATATG 3 cut(s) 577, 3607, 3786
NlaIV GGNNCC 8 cut(s) 6, 58, 182, 183, 627, 1694, 4032, 4071
NmeAIII GCCGAG 1 cut(s) 914
NmuCI GTSAC 8 cut(s) 328, 662, 1226, 1663, 2106, 2434, 3222, 4385
NsiI ATGCAT 2 cut(s) 1302, 3792
NspI RCATGY 5 cut(s) 1513, 1684, 2199, 3823, 3849
OliI CACNNNNGTG 3 cut(s) 1022, 1233, 1652
PaeI GCATGC 1 cut(s) 1684
PaeR7I CTCGAG 1 cut(s) 869
PagI TCATGA 1 cut(s) 2481
PceI AGGCCT 1 cut(s) 2093
PciI ACATGT 1 cut(s) 3845
PctI GAATGC 2 cut(s) 2399, 3533
PdmI GAANNNNTTC 3 cut(s) 155, 807, 4369
PflFI GACNNNGTC 1 cut(s) 4391
PleI GAGTC 9 cut(s) 205, 768, 880, 1471, 2062, 3748, 4309, 4331, 4407
PpsI GAGTC 9 cut(s) 205, 768, 880, 1471, 2062, 3748, 4309, 4331, 4407
PpuMI RGGWCCY 3 cut(s) 181, 2212, 4030
PscI ACATGT 1 cut(s) 3845
PsiI TTATAA 1 cut(s) 2945
Psp124BI GAGCTC 2 cut(s) 2818, 3001
Psp5II RGGWCCY 3 cut(s) 181, 2212, 4030
PspN4I GGNNCC 8 cut(s) 6, 58, 182, 183, 627, 1694, 4032, 4071
PspPPI RGGWCCY 3 cut(s) 181, 2212, 4030
PspXI VCTCGAGB 1 cut(s) 869
PstI CTGCAG 3 cut(s) 673, 1530, 4171
PstNI CAGNNNCTG 2 cut(s) 38, 2540
PsuI RGATCY 7 cut(s) 1497, 1692, 1713, 2375, 2551, 3577, 4499
PsyI GACNNNGTC 1 cut(s) 4391
PvuII CAGCTG 1 cut(s) 4213
RseI CAYNNNNRTG 4 cut(s) 1022, 1233, 1652, 3789
SacI GAGCTC 2 cut(s) 2818, 3001
SaqAI TTAA 8 cut(s) 767, 1457, 1502, 2073, 2270, 2529, 3116, 3615
ScaI AGTACT 1 cut(s) 2656
SchI GAGTC 9 cut(s) 205, 769, 881, 1472, 2062, 3749, 4309, 4331, 4407
SduI GDGCHC 8 cut(s) 630, 1645, 1755, 2566, 2818, 3001, 3076, 4236
SexAI ACCWGGT 1 cut(s) 912
SfcI CTRYAG 6 cut(s) 220, 669, 1526, 1759, 3129, 4167
Sfr274I CTCGAG 1 cut(s) 869
SinI GGWCC 6 cut(s) 181, 1315, 2212, 4030, 4069, 4393
SlaI CTCGAG 1 cut(s) 869
SmiMI CAYNNNNRTG 4 cut(s) 1022, 1233, 1652, 3789
SmlI CTYRAG 8 cut(s) 315, 620, 869, 1501, 1520, 2072, 2502, 4238
SmoI CTYRAG 8 cut(s) 315, 620, 869, 1501, 1520, 2072, 2502, 4238
SpeI ACTAGT 1 cut(s) 1232
SphI GCATGC 1 cut(s) 1684
SseBI AGGCCT 1 cut(s) 2093
SspI AATATT 1 cut(s) 3293
SstI GAGCTC 2 cut(s) 2818, 3001
StuI AGGCCT 1 cut(s) 2093
StyI CCWWGG 4 cut(s) 1307, 1975, 2111, 4222
TaiI ACGT 3 cut(s) 513, 2100, 2916
TaqI TCGA 6 cut(s) 870, 1014, 3402, 3972, 4077, 4363
TatI WGTACW 3 cut(s) 1168, 2654, 4488
TauI GCSGC 3 cut(s) 548, 1045, 3727
Tru1I TTAA 8 cut(s) 767, 1457, 1502, 2073, 2270, 2529, 3116, 3615
Tru9I TTAA 8 cut(s) 767, 1457, 1502, 2073, 2270, 2529, 3116, 3615
TseFI GTSAC 8 cut(s) 328, 662, 1226, 1663, 2106, 2434, 3222, 4385
TseI GCWGC 8 cut(s) 1141, 1370, 1525, 2462, 2731, 3173, 3944, 4210
Tsp45I GTSAC 8 cut(s) 328, 662, 1226, 1663, 2106, 2434, 3222, 4385
TspGWI ACGGA 3 cut(s) 2505, 3059, 4310
Tth111I GACNNNGTC 1 cut(s) 4391
Vha464I CTTAAG 2 cut(s) 1501, 2072
VneI GTGCAC 1 cut(s) 1641
VpaK11BI GGWCC 6 cut(s) 181, 1315, 2212, 4030, 4069, 4393
XagI CCTNNNNNAGG 3 cut(s) 620, 917, 2387
XapI RAATTY 6 cut(s) 155, 649, 1740, 1912, 2220, 4098
XbaI TCTAGA 1 cut(s) 3413
XceI RCATGY 5 cut(s) 1513, 1684, 2199, 3823, 3849
XcmI CCANNNNNNNNNTGG 2 cut(s) 1087, 3759
XhoI CTCGAG 1 cut(s) 869
XmiI GTMKAC 3 cut(s) 2679, 3147, 4085
XmnI GAANNNNTTC 3 cut(s) 155, 807, 4369
ZrmI AGTACT 1 cut(s) 2656
Zsp2I ATGCAT 2 cut(s) 1302, 3792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.