Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000680

Physical Location & Seq

Genomic Coordinates Reverse (-)

31915442 .. 31918462

Gene Structure 3021 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ31616

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGAAAGACGGAAAGATCACTCAAGCTGGAAAGTTCAATGACATTCTTAATTCAGGAACTGATTTTATGGATCTTGTGGGAGCACACAATGAAGCTTTGTCTGCGCTTGATTCTGTTGGGGTAGGGCCGGTTGAAAAAACAAGCATCAGCAAAGAAGATAACAATTCGGCTAGTACTACTGGGGCTGTCCAAAAAGTAGACAACAGAGATGTTCAAGCTAGTAAAATAGATGATTTAAGCGGGCCAAAAGGGCAGCTTGTTCAAGAAGAAGAGAGAAAGAAAGGTAAGGTTGGGTTTTCAGTGTACTGGAAATACATTTCCGCAGCGTATGGAGGAGCTCTCGTGCCTTTTATATTACTTGCACAGATTCTCTTTCAACTCCTTCAAATTGGAAGCAATTACTGGATGGCTTGGGCAACTCCTGTGTCAGCAGACGTGAAACCAACTGTTACAAGCTCTACGCTTATAATTGTCTATGTGGCCTTGGCTGTTGGAAGTTCTTTTTGTATCCTTTTCAGATCTCTGCTTCTTGTAACAGCTGGGTACAAGACAGCCACTATACTCTTCAATAAAATGCACTTGTGCATATTCCGTGCTCCCATGTCATTCTTCGATGCCACTCCAAGTGGACGAATCTTAAACAGAGCTTCTACAGACCAAAATGCAGTGGACATGAACATTTCAAATCAAATTGGGGCCTTTGCCAACTCAATGATACAGCTTTTAGGAATTATTGCAGTGATGTCTCAGGTGGCATGGCAGGTTTTCATCATATTTATACCTGTGATTACAGCCTGTGTTTGGTATCAGCAATATTACATACCTTCAGCACGAGAACTAGCAAGATTGGTTGGAGTATGCAAAGCTCCTGTGATACAACATTTTGCCGAAACAATTTCAGGGTCAACTACTATTAGGAGCTTTGATCAAGAATCCAGATTCCGTGATACCAACATGAAACTGATGGATGGATATGGTCGGCCAAAGTTCTACACAGCTGGTGCAATGGAGTGGCTATGCTTCCGCTTGGATGTGTTGTCATTCACTACTTTTGCATTCTGCATTGCGGGCTTAGCCGTCACATATGGACTTAACCTAAACATGTTACAAGCTTGGGTTATATGGCATCTTTGCAATATGGAAAACAAGATAATATCTGTGGAGAGAATACTACAGTATACTACTAGTATAACAAGTGAACCCCCTCTGGTAATAGATTCTAACAGACCTGATCATTCCTGGCCATCGCAAGGAAAAGTTGATATGCATGATCTTCAGGTGCGGTATGCTCCACACATGCCACTTGTGTTGCGGGGTCTTACATGTTCCTTCCCTGGAGGAATGAAAACTGGGATTGTGGGGAGAACTGGCAGTGGAAAGTCAACTCTCATTCAAACTCTTTTCCGAATCGTTGATCCTGCTGCTGGCCGGATTTTGATAGATGGCATCGATATCTCTTCTATTGGATTGCATGATCTGCGGTCTAAGCTAAGCATTATCCCTCAGGACCCAACCATGTTTGAAGGAACTGTAAGAAGCAATCTGGACCCACTTGAAGAGTATACAGATGATCAAATTTGGGAGGCCCTGGATAAATGCCAACTTGGGGATGAAGTTAGGAAAAAACAAGGGAAGCTTGATTCTGCAGTTAGTGAAAATGGAGAGAACTGGAGTATGGGTCAGAGGCAGCTGGTTTGCCTGGGCCGTGTGCTCCTCAAGAAAAGTAAAGTCCTGGTGCTTGATGAAGCTACTGCATCTGTTGATACTGCTACAGATAATTTGATTCAGCAGACCCTTCGGCATCACTTTTCAGACTGTACGGTCATTACTATTGCGCATCGAATAACTTCTGTTCTTGACAGTGACATGGTTCTACTTTTAAGTCATGGGCTTATTGAGGAATGTGATTCTCCTGCAAGATTGCTAGAAAACAAGTTATCATCTTTTGCCCAACTCGTAGCAGAGTATACAATGAGATCGAATTCCACTTTTGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0010290 GO:0015399 GO:0015405 GO:0015431 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042623 GO:0042626 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0055085 GO:0071997 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

665

Amino Acids

73.43

Weight (kDa)

6.1

Isoelectric Point (pI)

33.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	117 - 355	8.7e-29	ABC transporter transmembrane region
ABC_tran	PF00005	437 - 585	3.5e-28	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71330 AT3G13080 AT3G13080 AT3G13080 AT3G13080 AT3G13080 AT3G13090 AT3G13100 AT3G13100
fragaria_vesca	FvH4_3g25430 FvH4_3g25430 FvH4_4g10780
malus_domestica	MD03G1188200.v1.1 MD11G1203300.v1.1 MD11G1203400.v1.1 MD11G1203500.v1.1 MD11G1203600.v1.1
prunus_persica	Prupe.4G235100_v2.0.a1 Prupe.4G235200_v2.0.a1 Prupe.4G235300_v2.0.a1 Prupe.I000500_v2.0.a1 Prupe.I000600_v2.0.a1 Prupe.I000700_v2.0.a1
pyrus_communis	pycom03g14070 pycom03g14080 pycom11g17640 pycom11g17650
rosa_chinensis	RchiOBHm_Chr4g0406401 RchiOBHm_Chr4g0406811 RchiOBHm_Chr5g0037441 RchiOBHm_Chr5g0037451 RchiOBHm_Chr5g0037461 RchiOBHm_Chr5g0046661 RchiOBHm_Chr5g0046671 RchiOBHm_Chr5g0046681
rosa_laevigata	RLG00000008754 RLG00000008756 RLG00000033782 RLG00000034430 RLG00000034431
rosa_multiflora	Rmu_co8175670.1_g000001 Rmu_sc0000292.1_g000013 Rmu_sc0000292.1_g000018 Rmu_sc0002271.1_g000015 Rmu_sc0002521.1_g000018 Rmu_sc0006408.1_g000011 Rmu_sc0008087.1_g000002
rosa_roxburghii	Rroxscaffold_1G00023630 Rroxscaffold_1G00034680 Rroxscaffold_1G00034700 Rroxscaffold_5G00351590 Rroxscaffold_6G00394770
rosa_rugosa	Rorug04G0074200 Rorug04G0074200 Rorug04G0084900 Rorug04G0084900 Rorug05G0230800 Rorug05G0230800
rosa_samantha	Rh1AG181100 Rh4AG141000 Rh4BG137500 Rh4BG146500 Rh5CG289500 Rh5CG289600 Rh5CG344900 Rh5CG345000 Rh7AG392100
rosa_wichuraiana	Rw0G000830 Rw1G003740 Rw4G011460 Rw4G011480 Rw5G023560 Rw5G023570 Rw5G028980 Rw5G028990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	467
AasI	GACNNNNNNGTC	1 cut(s)	1820
Acc16I	TGCGCA	1 cut(s)	1836
Acc36I	ACCTGC	1 cut(s)	751
AccI	GTMKAC	4 cut(s)	198, 1178, 1562, 1967
AciI	CCGC	7 cut(s)	240, 321, 1024, 1067, 1282, 1312, 1480
AclWI	GGATC	2 cut(s)	78, 1409
AcoI	YGGCCR	3 cut(s)	980, 1241, 1426
AcsI	RAATTY	2 cut(s)	1575, 1981
AcuI	CTGAAG	2 cut(s)	810, 1259
AfaI	GTAC	4 cut(s)	175, 305, 545, 1819
AfiI	CCNNNNNNNGG	4 cut(s)	801, 1250, 1424, 1606
AflIII	ACRYGT	2 cut(s)	1101, 1322
AhlI	ACTAGT	1 cut(s)	1184
AjiI	CACGTC	1 cut(s)	436
AjnI	CCWGG	5 cut(s)	1238, 1333, 1587, 1698, 1731
Alw21I	GWGCWC	4 cut(s)	85, 340, 598, 1713
Alw26I	GTCTC	1 cut(s)	750
AlwI	GGATC	2 cut(s)	78, 1409
AlwNI	CAGNNNCTG	1 cut(s)	59
AoxI	GGCC	9 cut(s)	125, 242, 480, 696, 980, 1241, 1426, 1584, 1702
ApeKI	GCWGC	4 cut(s)	253, 323, 1421, 1687
ApoI	RAATTY	2 cut(s)	1575, 1981
Asp700I	GAANNNNTTC	1 cut(s)	1846
AspLEI	GCGC	2 cut(s)	106, 1837
AspS9I	GGNCC	7 cut(s)	125, 242, 696, 1507, 1546, 1585, 1702
AvaII	GGWCC	2 cut(s)	1507, 1546
AxyI	CCTNAGG	1 cut(s)	1503
BalI	TGGCCA	1 cut(s)	1243
BanII	GRGCYC	1 cut(s)	340
BauI	CACGAG	2 cut(s)	341, 831
Bbv12I	GWGCWC	4 cut(s)	85, 340, 598, 1713
BbvI	GCAGC	4 cut(s)	265, 335, 1408, 1699
BccI	CCATC	5 cut(s)	400, 958, 962, 1252, 1436
BceAI	ACGGC	2 cut(s)	1061, 1689
BcgI	CGANNNNNNTGC	2 cut(s)	1778, 1812
BciT130I	CCWGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
BciVI	GTATCC	1 cut(s)	518
BclI	TGATCA	3 cut(s)	925, 1231, 1570
BcoDI	GTCTC	1 cut(s)	750
BcuI	ACTAGT	1 cut(s)	1184
BfaI	CTAG	5 cut(s)	171, 219, 839, 1185, 1925
BfmI	CTRYAG	4 cut(s)	651, 1172, 1644, 1770
BfuAI	ACCTGC	1 cut(s)	751
BfuI	GTATCC	1 cut(s)	518
BglI	GCCNNNNNGGC	1 cut(s)	250
BglII	AGATCT	1 cut(s)	518
BisI	GCNGC	4 cut(s)	254, 324, 1422, 1688
BlpI	GCTNAGC	2 cut(s)	1072, 1490
BlsI	GCNGC	4 cut(s)	255, 325, 1423, 1689
BmcAI	AGTACT	1 cut(s)	175
Bme1390I	CCNGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
Bme18I	GGWCC	2 cut(s)	1507, 1546
BmgBI	CACGTC	1 cut(s)	436
BmgT120I	GGNCC	7 cut(s)	125, 242, 696, 1507, 1546, 1585, 1702
BmiI	GGNNCC	3 cut(s)	697, 1509, 1548
BmrFI	CCNGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
BmrI	ACTGGG	2 cut(s)	189, 1359
BmsI	GCATC	7 cut(s)	153, 604, 1135, 1455, 1763, 1810, 1846
BmuI	ACTGGG	2 cut(s)	189, 1359
BplI	GAGNNNNNCTC	2 cut(s)	324, 356
BpmI	CTGGAG	2 cut(s)	1356, 1690
Bpu1102I	GCTNAGC	2 cut(s)	1072, 1490
BpuEI	CTTGAG	2 cut(s)	6, 1700
Bsa29I	ATCGAT	1 cut(s)	1449
BsaJI	CCNNGG	4 cut(s)	483, 1333, 1587, 1699
BsaXI	ACNNNNNCTCC	4 cut(s)	327, 357, 1663, 1693
Bsc4I	CCNNNNNNNGG	4 cut(s)	801, 1250, 1424, 1606
Bse118I	RCCGGY	1 cut(s)	127
Bse1I	ACTGG	6 cut(s)	184, 311, 407, 1354, 1372, 1673
Bse21I	CCTNAGG	1 cut(s)	1503
Bse3DI	GCAATG	2 cut(s)	1011, 1062
BseBI	CCWGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
BseCI	ATCGAT	1 cut(s)	1449
BseDI	CCNNGG	4 cut(s)	483, 1333, 1587, 1699
BseGI	GGATG	4 cut(s)	411, 973, 1036, 1615
BseLI	CCNNNNNNNGG	4 cut(s)	801, 1250, 1424, 1606
BseMI	GCAATG	2 cut(s)	1011, 1062
BseMII	CTCAG	2 cut(s)	761, 1517
BseNI	ACTGG	6 cut(s)	184, 311, 407, 1354, 1372, 1673
BseRI	GAGGAG	2 cut(s)	348, 1703
BseXI	GCAGC	4 cut(s)	265, 335, 1408, 1699
BseYI	CCCAGC	1 cut(s)	539
BshFI	GGCC	9 cut(s)	127, 244, 482, 698, 982, 1243, 1428, 1586, 1704
BshVI	ATCGAT	1 cut(s)	1449
BsiHKAI	GWGCWC	4 cut(s)	85, 340, 598, 1713
BsiSI	CCGG	2 cut(s)	128, 1429
BslI	CCNNNNNNNGG	4 cut(s)	801, 1250, 1424, 1606
BsmAI	GTCTC	1 cut(s)	750
BsmI	GAATGC	1 cut(s)	1055
BsnI	GGCC	9 cut(s)	127, 244, 482, 698, 982, 1243, 1428, 1586, 1704
Bsp1286I	GDGCHC	4 cut(s)	85, 340, 598, 1713
Bsp1720I	GCTNAGC	2 cut(s)	1072, 1490
BspACI	CCGC	7 cut(s)	240, 321, 1024, 1067, 1282, 1312, 1480
BspANI	GGCC	9 cut(s)	127, 244, 482, 698, 982, 1243, 1428, 1586, 1704
BspCNI	CTCAG	2 cut(s)	760, 1516
BspDI	ATCGAT	1 cut(s)	1449
BspLI	GGNNCC	3 cut(s)	697, 1509, 1548
BspMAI	CTGCAG	1 cut(s)	1648
BspMI	ACCTGC	1 cut(s)	751
BspPI	GGATC	2 cut(s)	78, 1409
BsrDI	GCAATG	2 cut(s)	1011, 1062
BsrFI	RCCGGY	1 cut(s)	127
BsrI	ACTGG	6 cut(s)	184, 311, 407, 1354, 1372, 1673
BssAI	RCCGGY	1 cut(s)	127
BssECI	CCNNGG	4 cut(s)	483, 1333, 1587, 1699
BssNAI	GTATAC	3 cut(s)	1179, 1563, 1968
BssSI	CACGAG	2 cut(s)	341, 831
BssT1I	CCWWGG	1 cut(s)	483
Bst1107I	GTATAC	3 cut(s)	1179, 1563, 1968
Bst2BI	CACGAG	2 cut(s)	341, 831
Bst2UI	CCWGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
Bst4CI	ACNGT	6 cut(s)	448, 1176, 1531, 1817, 1822, 1862
Bst6I	CTCTTC	4 cut(s)	264, 569, 1462, 1551
BstAPI	GCANNNNNTGC	1 cut(s)	1477
BstC8I	GCNNGC	3 cut(s)	242, 1069, 1426
BstDEI	CTNAG	5 cut(s)	747, 1072, 1485, 1490, 1503
BstF5I	GGATG	4 cut(s)	411, 973, 1036, 1615
BstHHI	GCGC	2 cut(s)	106, 1837
BstMAI	GTCTC	1 cut(s)	750
BstMWI	GCNNNNNNNGC	6 cut(s)	101, 250, 1068, 1073, 1477, 1486
BstNI	CCWGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
BstNSI	RCATGY	3 cut(s)	1105, 1300, 1326
BstSCI	CCNGG	5 cut(s)	1238, 1333, 1587, 1698, 1731
BstSFI	CTRYAG	4 cut(s)	651, 1172, 1644, 1770
BstV1I	GCAGC	4 cut(s)	265, 335, 1408, 1699
BstX2I	RGATCY	2 cut(s)	70, 518
BstYI	RGATCY	2 cut(s)	70, 518
BstZ17I	GTATAC	3 cut(s)	1179, 1563, 1968
Bsu15I	ATCGAT	1 cut(s)	1449
Bsu36I	CCTNAGG	1 cut(s)	1503
BsuI	GTATCC	1 cut(s)	518
BsuRI	GGCC	9 cut(s)	127, 244, 482, 698, 982, 1243, 1428, 1586, 1704
BsuTUI	ATCGAT	1 cut(s)	1449
BtgZI	GCGATG	1 cut(s)	1230
BtrI	CACGTC	1 cut(s)	436
BtsCI	GGATG	4 cut(s)	411, 973, 1036, 1615
BtsI	GCAGTG	3 cut(s)	672, 744, 1378
BtsIMutI	CAGTG	5 cut(s)	306, 672, 744, 1378, 1867
BveI	ACCTGC	1 cut(s)	751
Cac8I	GCNNGC	3 cut(s)	242, 1069, 1426
CaiI	CAGNNNCTG	1 cut(s)	59
CfoI	GCGC	2 cut(s)	106, 1837
Cfr10I	RCCGGY	1 cut(s)	127
Cfr13I	GGNCC	7 cut(s)	125, 242, 696, 1507, 1546, 1585, 1702
ClaI	ATCGAT	1 cut(s)	1449
Csp6I	GTAC	4 cut(s)	174, 304, 544, 1818
CspCI	CAANNNNNGTGG	2 cut(s)	1290, 1325
CviQI	GTAC	4 cut(s)	174, 304, 544, 1818
DdeI	CTNAG	5 cut(s)	747, 1072, 1485, 1490, 1503
DrdI	GACNNNNNNGTC	1 cut(s)	1820
DseDI	GACNNNNNNGTC	1 cut(s)	1820
EaeI	YGGCCR	3 cut(s)	980, 1241, 1426
Eam1104I	CTCTTC	4 cut(s)	264, 569, 1462, 1551
EarI	CTCTTC	4 cut(s)	264, 569, 1462, 1551
Ecl136II	GAGCTC	1 cut(s)	338
Eco130I	CCWWGG	1 cut(s)	483
Eco24I	GRGCYC	1 cut(s)	340
Eco32I	GATATC	1 cut(s)	1453
Eco47I	GGWCC	2 cut(s)	1507, 1546
Eco53kI	GAGCTC	1 cut(s)	338
Eco57I	CTGAAG	2 cut(s)	810, 1259
Eco81I	CCTNAGG	1 cut(s)	1503
EcoICRI	GAGCTC	1 cut(s)	338
EcoO109I	RGGNCCY	3 cut(s)	696, 1507, 1585
EcoRI	GAATTC	1 cut(s)	1981
EcoRII	CCWGG	5 cut(s)	1238, 1333, 1587, 1698, 1731
EcoRV	GATATC	1 cut(s)	1453
EcoT14I	CCWWGG	1 cut(s)	483
EcoT22I	ATGCAT	1 cut(s)	1269
EcoT38I	GRGCYC	1 cut(s)	340
ErhI	CCWWGG	1 cut(s)	483
FalI	AAGNNNNNCTT	4 cut(s)	240, 272, 1620, 1652
FauI	CCCGC	3 cut(s)	233, 1060, 1305
FauNDI	CATATG	1 cut(s)	1084
FbaI	TGATCA	3 cut(s)	925, 1231, 1570
FblI	GTMKAC	4 cut(s)	198, 1178, 1562, 1967
Fnu4HI	GCNGC	4 cut(s)	254, 324, 1422, 1688
FokI	GGATG	4 cut(s)	418, 980, 1043, 1622
FriOI	GRGCYC	1 cut(s)	340
Fsp4HI	GCNGC	4 cut(s)	254, 324, 1422, 1688
FspBI	CTAG	5 cut(s)	171, 219, 839, 1185, 1925
FspI	TGCGCA	1 cut(s)	1836
GlaI	GCGC	2 cut(s)	105, 1836
GluI	GCNGC	4 cut(s)	254, 324, 1422, 1688
GsaI	CCCAGC	1 cut(s)	543
GsuI	CTGGAG	2 cut(s)	1356, 1690
HaeIII	GGCC	9 cut(s)	127, 244, 482, 698, 982, 1243, 1428, 1586, 1704
HapII	CCGG	2 cut(s)	128, 1429
HhaI	GCGC	2 cut(s)	106, 1837
Hin6I	GCGC	2 cut(s)	104, 1835
HinP1I	GCGC	2 cut(s)	104, 1835
HincII	GTYRAC	2 cut(s)	906, 1383
HindII	GTYRAC	2 cut(s)	906, 1383
HindIII	AAGCTT	3 cut(s)	93, 1110, 1634
HpaII	CCGG	2 cut(s)	128, 1429
Hpy188I	TCNGA	4 cut(s)	518, 1406, 1683, 1813
Hpy188III	TCNNGA	8 cut(s)	54, 263, 929, 936, 1505, 1544, 1717, 1856
HpyAV	CCTTC	5 cut(s)	392, 834, 1339, 1517, 1805
HpyCH4III	ACNGT	6 cut(s)	448, 1176, 1531, 1817, 1822, 1862
HpyCH4IV	ACGT	1 cut(s)	435
HpyF10VI	GCNNNNNNNGC	6 cut(s)	101, 250, 1068, 1073, 1477, 1486
HpyF3I	CTNAG	5 cut(s)	747, 1072, 1485, 1490, 1503
HpySE526I	ACGT	1 cut(s)	435
HspAI	GCGC	2 cut(s)	104, 1835
Ksp22I	TGATCA	3 cut(s)	925, 1231, 1570
LmnI	GCTCC	7 cut(s)	80, 335, 601, 871, 918, 1294, 1716
Lsp1109I	GCAGC	4 cut(s)	265, 335, 1408, 1699
LweI	GCATC	7 cut(s)	153, 604, 1135, 1455, 1763, 1810, 1846
MaeI	CTAG	5 cut(s)	171, 219, 839, 1185, 1925
MaeII	ACGT	1 cut(s)	435
MaeIII	GTNAC	5 cut(s)	448, 532, 1078, 1104, 1862
MboII	GAAGA	8 cut(s)	167, 278, 281, 556, 601, 1265, 1449, 1568
MflI	RGATCY	2 cut(s)	70, 518
MhlI	GDGCHC	4 cut(s)	85, 340, 598, 1713
MlsI	TGGCCA	1 cut(s)	1243
MluNI	TGGCCA	1 cut(s)	1243
MmeI	TCCRAC	2 cut(s)	472, 832
MnlI	CCTC	8 cut(s)	326, 1215, 1331, 1512, 1576, 1677, 1724, 1891
Mox20I	TGGCCA	1 cut(s)	1243
Mph1103I	ATGCAT	1 cut(s)	1269
MroXI	GAANNNNTTC	1 cut(s)	1846
MscI	TGGCCA	1 cut(s)	1243
MseI	TTAA	5 cut(s)	48, 236, 638, 1092, 1880
Msp20I	TGGCCA	1 cut(s)	1243
MspA1I	CMGCKG	3 cut(s)	539, 998, 1690
MspI	CCGG	2 cut(s)	128, 1429
MspR9I	CCNGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
Mva1269I	GAATGC	1 cut(s)	1055
MvaI	CCWGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
MwoI	GCNNNNNNNGC	6 cut(s)	101, 250, 1068, 1073, 1477, 1486
NdeI	CATATG	1 cut(s)	1084
NlaIV	GGNNCC	3 cut(s)	697, 1509, 1548
NmuCI	GTSAC	2 cut(s)	1078, 1862
NsbI	TGCGCA	1 cut(s)	1836
NsiI	ATGCAT	1 cut(s)	1269
NspI	RCATGY	3 cut(s)	1105, 1300, 1326
PciI	ACATGT	2 cut(s)	1101, 1322
PctI	GAATGC	1 cut(s)	1055
PdmI	GAANNNNTTC	1 cut(s)	1846
PkrI	GCNGC	4 cut(s)	255, 325, 1423, 1689
PpuMI	RGGWCCY	1 cut(s)	1507
PscI	ACATGT	2 cut(s)	1101, 1322
PsiI	TTATAA	1 cut(s)	467
Psp124BI	GAGCTC	1 cut(s)	340
Psp5II	RGGWCCY	1 cut(s)	1507
Psp6I	CCWGG	5 cut(s)	1238, 1333, 1587, 1698, 1731
PspFI	CCCAGC	1 cut(s)	539
PspGI	CCWGG	5 cut(s)	1238, 1333, 1587, 1698, 1731
PspN4I	GGNNCC	3 cut(s)	697, 1509, 1548
PspPI	GGNCC	7 cut(s)	125, 242, 696, 1507, 1546, 1585, 1702
PspPPI	RGGWCCY	1 cut(s)	1507
PstI	CTGCAG	1 cut(s)	1648
PstNI	CAGNNNCTG	1 cut(s)	59
PsuI	RGATCY	2 cut(s)	70, 518
PvuII	CAGCTG	3 cut(s)	539, 998, 1690
RsaI	GTAC	4 cut(s)	175, 305, 545, 1819
RsaNI	GTAC	4 cut(s)	174, 304, 544, 1818
SacI	GAGCTC	1 cut(s)	340
SaqAI	TTAA	5 cut(s)	48, 236, 638, 1092, 1880
SatI	GCNGC	4 cut(s)	254, 324, 1422, 1688
Sau96I	GGNCC	7 cut(s)	125, 242, 696, 1507, 1546, 1585, 1702
ScaI	AGTACT	1 cut(s)	175
ScrFI	CCNGG	5 cut(s)	1240, 1335, 1589, 1700, 1733
SduI	GDGCHC	4 cut(s)	85, 340, 598, 1713
SfaNI	GCATC	7 cut(s)	153, 604, 1135, 1455, 1763, 1810, 1846
SfcI	CTRYAG	4 cut(s)	651, 1172, 1644, 1770
SinI	GGWCC	2 cut(s)	1507, 1546
SmlI	CTYRAG	2 cut(s)	21, 1715
SmoI	CTYRAG	2 cut(s)	21, 1715
SpeI	ACTAGT	1 cut(s)	1184
SsiI	CCGC	7 cut(s)	240, 321, 1024, 1067, 1282, 1312, 1480
SspI	AATATT	1 cut(s)	815
SspMI	CTAG	5 cut(s)	171, 219, 839, 1185, 1925
SstI	GAGCTC	1 cut(s)	340
StyD4I	CCNGG	5 cut(s)	1238, 1333, 1587, 1698, 1731
StyI	CCWWGG	1 cut(s)	483
TaaI	ACNGT	6 cut(s)	448, 1176, 1531, 1817, 1822, 1862
TaiI	ACGT	1 cut(s)	438
TaqI	TCGA	4 cut(s)	612, 1449, 1840, 1979
TatI	WGTACW	2 cut(s)	173, 303
Tru1I	TTAA	5 cut(s)	48, 236, 638, 1092, 1880
Tru9I	TTAA	5 cut(s)	48, 236, 638, 1092, 1880
TscAI	CASTG	5 cut(s)	306, 672, 744, 1378, 1867
TseFI	GTSAC	2 cut(s)	1078, 1862
TseI	GCWGC	4 cut(s)	253, 323, 1421, 1687
Tsp45I	GTSAC	2 cut(s)	1078, 1862
TspDTI	ATGAA	8 cut(s)	17, 105, 689, 757, 971, 1358, 1626, 1758
TspGWI	ACGGA	3 cut(s)	24, 581, 932
TspRI	CASTG	5 cut(s)	306, 672, 744, 1378, 1867
VpaK11BI	GGWCC	2 cut(s)	1507, 1546
XapI	RAATTY	2 cut(s)	1575, 1981
XceI	RCATGY	3 cut(s)	1105, 1300, 1326
XmiI	GTMKAC	4 cut(s)	198, 1178, 1562, 1967
XmnI	GAANNNNTTC	1 cut(s)	1846
XspI	CTAG	5 cut(s)	171, 219, 839, 1185, 1925
ZrmI	AGTACT	1 cut(s)	175
Zsp2I	ATGCAT	1 cut(s)	1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.