RchiOBHm_Chr5g0046681

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
42897991 .. 42904091
6101 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32467

Sequence Viewer

Length: 4530 bp
ATGGAGCTGTTTGATCCATCAATACACGCCGTCTCTGCCTTTTTCTCATTCATGTATTCAGGTACCGATTTCCTTCTTAAACCCATTTTCATTCGTGGGTTTTCTGGCTCATTACATCTGCTTCTGTTATTTGTGTTGCTTGTCTCCTGGGTGTGGAAGAAATTCAAGGGGGGTGATGGAGGAGGTGACCCAAAAGAGGGTTTTAGGAAAACTGAACCTTTGCACTTTAAGCCCACTTTAATCTGTTGTCTTGGTGTTTCTGCAGTTAGTGTTGGCTTTTGTTTATTCAACTACTTTTCCTGGTCTAGATATGGTTGGTCTGAAGAAAAGCTAGTGACCCTTTTTGATTTAGCAATTAGAACACTTAGTTGGGGTGCAGTTTTTGTTTACTTGCATACCCAATTCTCTAATTCTGGTGAATCAAAGTTCCCATACTTACTCAGAGTCTGGTGGGGTTTCTACTTCTCTCTTTCATGCTATTGCTTTTTCGTAGACATTTTTCTTTACCAAAAACACGTTTCGTTACCCGTTCAATCCTTAGTTTCTGATGCTGCCTTCCTTATCTCTGCTTTGTTCTTTATATATGTGGGGTTTATTGGGACGAAAGAGGGTAGAGATACCCTTCTTGAGGAACCCCTTTTGAGTGGCACAACAAATTCTAGTATAGGTAACACTGCAGAATCAAATAAGTCCGAAGGGGTTGAAACTGTGAAAACCCCTTATTCAAATGCTGGATTTTTCAGCATCCTCACTTTTTCTTGGATGAGTCCTTTAATCGCTGTTGGCAATAAGAAAACATTAGACCTTGAAGATGTTCCTGGACTAGACAAGGGTGATAGTGTAGTTGGGTCCCTTCCAATTTTTAGAAATAAGCTGGAGTCAGAGTGTGGTACTCTTAGCAGAGTTACCACACTTCATCTGGTAAAGGCATTAATCTTCTCGGCCTGGAGAGAGATTCTTTGGACAGCTTTGTTTGCACTGCTGTCCACAGTGGCTACTTATGTCGGCCCATATCTAATCGACACCTTTGTGCAATACCTCAATGGGCGACGTGAGTTCAGAAATCAGGGCTATGCTTTAGTTTCTGCATTTTTGGGGGCCAAGGTTGTGGAGTGCCTCTGTGACAGGCACTGGATCTTCAGGGGGCAGCAGATAGGAGTTAGAATGAGAGCTTTATTGGTTGCCATGATCTATAATAAGGGTTTGAGCCTGTCTTGCCAGTCCAAGCAGCGCCACACTAGTGGTGAGATTATCAATTTTATGACTGTTGATGCTGAGAGGGTTGGCGACTTCGCTTGGTACATGCATGAACCATGGATCATCATTCTAGAAGTTGCTTTGGCCCTCTTTATTTTGTATAAAAATCTTGGTCTCGGTGCAATCGCAACTTTAGTTGCAACTGTAATGGTTATGTTGGCAAATGTTCCTCTCCAAAAATTGCAAGAGAAGTTTCAAAGGAAACTAATGGAGTCAAAGGACGGAAGGATGAAGGCAACATCTGAGATTTTAAGGAACATGCGGATTCTCAAGCTTCAAGCATGGGAGATGAAGTTTTTGTCAAAAATTATTGACCTCAGGAAGATTGAGACAGAATGGTTACGAAAGTTTGTTTGCACTTCGGCCATGACCTCATTTGTCTTCTGGGCTGCCCCTACATTTGTGTCTGTGGTCACCTTTGTTGCTTGCGTGCTTTTTTTCGAGATCCCTCTGGAATCGGGGAAGATCTTATCTGTGCTTGCAACTTTCAGAATTCTTCAAGAGCCCATCAACCTTCTTCCAGACACAATTTCAATGATAGCACAGACAAAGGTATCCCTTGAAAGAATTTCATCATTCCTTTCTCTTGATGAGTTGAAGCCTGATGCTATAGAGAACCTCCCTATAGGTAGTTCTCATACTGCAATTGAGATAGTAGATGCAAATTTCTCTTGGGATATATCTTCACCTAACCCAACATTGAAGGATATAAATCTCAAAATTAGCCATGGTATGAGGGTTGCTGTTTGTGGTACTGTTGGCTCAGGCAAGTCAACCTTACTTTCTTGTATTCTGGGAGAAGTGCCCAAGATATCTGGTCTTCTTAAGTTGTGTGGGACAAAGGCCTATGTTTCTCAGTCACCATGGATACAGAGTGGCAAGATAGAAGAAAACATATTGTTTGGTAAAGTGATGGACAGAGAAAGGTATGAGGGGGTTCTCGAAGCATGTTCGTTGAAGAAGGACCTGGAAATTCTACCATTTGGTGACCAGACCATTATAGGGGAGAGGGGAATCAATTTAAGTGGAGGGCAGAAGCAAAGAATACAAATTGCGCGAGCTCTGTACCAAGATGCTGATATCTATCTGTTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGATCCCACCTTTTCAAGGAATGTTTGATGGCCCTCTTGAGTTCCAAAACAGTAATCTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGATATTATCTTGGTCATGAACGATGGAAGGATCACCCAAGCTGGAAAGTTCAATGACATTATCAATTCAGGAACTGATTTTAAAGATCTTGTGGGAGCACACAATGAAGCTTTGTCTGCGCTTGATTCTGTTGGGGTAGGGCCAGGTGAAAAAACAAGCATCAGCGAGGAAGATAACAATTTGACTAGTACTAATGGGGCTGTCAAAGAAGTAGACAACAACGATGTTGAGGATTGTAAAATAGATGATTTAGGTGTGCCAAAAGGGCAGCTTGTTCAAGAAGAAGAGAGAGAGAAAGGTAAGGTTGGGTTCTCAGTGTACTGGAAATACATTACCACAGCGTACAGAGGTGCTTTTGTGCCTTTTATATTGCTTGCACATACTCTTTTTCAACTCCTTCAAATTGGAAGCAATTACTGGATGGCTTGGGCGGCTCCTGTGTCAGCAGACGTGAAACCTCCTGTTACAAGCTCTATGCTTATAATTGTCTATGTGGCTTTGGCTGTTGGAAGTTCTTTCTGTGTCCTTCTCAGAGCTCTGCTTCTTGTAACAGCAGGGTACAAGACAGCCACTATACTCTTCCATAAAATGCACTTGTGTATTTTCCGTGCTCCCATGTCATTCTTTGATGCCACTCCAAGTGGAAGAATCTTAAACAGAGCTTCTACGGACCAAAATGCATTGGATATGAACATATCAAATCAAGTTGCCTCCTTTGCCTACTCAATGATATGGCTTTTAGGATATATTGCAGTGATGTCTCAGGTGGCATGGCAGGTTTCCATCATATTTATACCTGTGATTACAGCCTGTGTTTGGTATCAGAAATATTATCTACCTTCAGCACGAGAACTATCAAGATTGGTTGGAGTATGCAAAGCTCCTGTGATACAACATTTTGCTGAAACAATTTCTGGATCAACTACTATTAGGAGCTTTGACCAAGGATCTAGATTCCGAGATATCAACATGGAACTGATAGATGGATATAGTCGGCCAACGTTCTACACCGTTTGTGCAATGCAATGGCTAAGCTTTCGTTTGGATATTTTGTCATCCATTACATTTGCATTGTTTTTAGTTTTCTTGATCTCTGTTCCAGAAGGAATGATAGATCCAGGCATTGCGGGTTTAGCCGTCACATATGGAATTACCCTAAACGGTTTACAAACTGCACTTATATGGAATCTTTGCAATATGGAGAACAAGATAATATCAGTGGAGAGAATACTACAATATACTACTAGTATACCAAGTGAGCCTCCTCTGGTAATAGAATCTAATAGACCAGATCATTCCTGGCCATCACGAGGAAAAGTTGATATGCATGATCTTCAGGTGCGGTATGCTCCACACTTGCCACTTGTGTTGCGGGGTCTCACATGTACCTTTCCTGGAGGAATTAAAACTGGTATTGTGGGGAGAACTGGCAGTGGAAAGTCAACTCTTATACAAACTCTTTTCCGAATTGTTGATCCTGATGTTGGCCGGATTTTGATAGATGGCGTCGATATCTCTTCTATTGGATTGCATGATCTGCGGTCTAATCTAAGCATTATCCCTCAGGACCCAACCATGTTTGAGGGAACTGTAAGAAGCAATCTAGACCCACTTGAAGAGTACAAAGATGAACAAATTTGGGAGGCCTTGGATAAGTGCCAACTTGGAGATGAAGTTAGGAAGAAAGAAGGGAAGCTGGATTCTGCAGTTAGTGAAAATGGAGAGAACTGGAGTATGGGTCAGAGGCAGCTCGTTTGCCTGGGCCGTGTGCTCCTCAAGAAAAGTAAGGTCCTGGTGCTTGATGAAGCTACTGCATCTGTTGATACTGCTACAGATAATCTGATTCAGCAGACCCTTCGGCATCACTTCTCAGACTGTACCGTCATTACTATTGCGCACCGAATATCTTCTGTTCTTGACAGTGACATGGTTCTTCTTCTAAGTAATGGGCTCCTTGAGGAATGTGATTCTCCTGCAAGATTGCTAGAAAACAAGTTATCAGCTTTTGCCCAACTTGTAGAGGAGTACACAATGAGATCGAATTCCACTCTTTAG

Protein Analysis

1509

Amino Acids

168.01

Weight (kDa)

6.07

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 323 - 588 4.5e-24 ABC transporter transmembrane region
ABC_tran PF00005 653 - 787 6.3e-20 ABC transporter
ABC_membrane PF00664 949 - 1189 6.3e-27 ABC transporter transmembrane region
ABC_tran PF00005 1282 - 1430 1.7e-27 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2957
AasI GACNNNNNNGTC 1 cut(s) 4355
Acc16I TGCGCA 1 cut(s) 4371
Acc36I ACCTGC 2 cut(s) 2476, 3241
Acc65I GGTACC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 62
AccI GTMKAC 3 cut(s) 492, 2688, 3724
AccII CGCG 1 cut(s) 2314
AciI CCGC 6 cut(s) 1519, 2906, 3602, 3817, 3847, 4015
AclI AACGTT 1 cut(s) 3476
AcoI YGGCCR 4 cut(s) 1620, 3470, 3776, 3961
AcsI RAATTY 8 cut(s) 161, 655, 1749, 1824, 1921, 2229, 4110, 4516
AcuI CTGAAG 4 cut(s) 342, 1123, 3300, 3794
AcyI GRCGYC 1 cut(s) 3981
AfiI CCNNNNNNNGG 9 cut(s) 153, 196, 197, 628, 2259, 2398, 3291, 3785, 3959
AflII CTTAAG 1 cut(s) 2081
AflIII ACRYGT 2 cut(s) 514, 3857
AhlI ACTAGT 3 cut(s) 1238, 2660, 3719
AjiI CACGTC 2 cut(s) 1052, 2926
AjuI GAANNNNNNNTTGG 2 cut(s) 352, 384
AleI CACNNNNGTG 2 cut(s) 1028, 1239
Alw21I GWGCWC 5 cut(s) 2320, 2575, 3013, 3088, 4248
Alw26I GTCTC 6 cut(s) 37, 148, 1376, 1580, 3240, 3857
AlwNI CAGNNNCTG 3 cut(s) 447, 1131, 2549
ApeKI GCWGC 7 cut(s) 551, 1147, 1228, 1646, 2471, 2743, 4222
ApoI RAATTY 8 cut(s) 161, 655, 1749, 1824, 1921, 2229, 4110, 4516
AseI ATTAAT 1 cut(s) 932
Asp700I GAANNNNTTC 3 cut(s) 161, 813, 4381
Asp718I GGTACC 1 cut(s) 62
AspLEI GCGC 4 cut(s) 1233, 2314, 2596, 4372
AvaII GGWCC 5 cut(s) 849, 2221, 3145, 4042, 4264
AxyI CCTNAGG 2 cut(s) 1574, 4038
BaeGI GKGCMC 1 cut(s) 2064
BaeI ACNNNNGTAYC 2 cut(s) 1794, 1827
BalI TGGCCA 1 cut(s) 3778
BamHI GGATCC 1 cut(s) 2384
BanI GGYRCC 1 cut(s) 62
BanII GRGCYC 4 cut(s) 1764, 2320, 3013, 4428
BauI CACGAG 2 cut(s) 3321, 3783
BbsI GAAGAC 2 cut(s) 1630, 2069
Bbv12I GWGCWC 5 cut(s) 2320, 2575, 3013, 3088, 4248
BbvI GCAGC 7 cut(s) 538, 1159, 1240, 1633, 2458, 2755, 4234
BceAI ACGGC 3 cut(s) 14, 3596, 4224
BcgI CGANNNNNNTGC 2 cut(s) 4313, 4347
BciVI GTATCC 2 cut(s) 1822, 2118
BcoDI GTCTC 6 cut(s) 37, 148, 1376, 1580, 3240, 3857
BcuI ACTAGT 3 cut(s) 1238, 2660, 3719
BfmI CTRYAG 6 cut(s) 261, 675, 1866, 1881, 4179, 4305
BfoI RGCGCY 1 cut(s) 1234
BfrI CTTAAG 1 cut(s) 2081
BfuAI ACCTGC 2 cut(s) 2476, 3241
BfuI GTATCC 2 cut(s) 1822, 2118
BglI GCCNNNNNGGC 1 cut(s) 2740
BglII AGATCT 2 cut(s) 1722, 2560
BisI GCNGC 8 cut(s) 552, 1148, 1229, 1647, 2472, 2744, 2907, 4223
BlpI GCTNAGC 1 cut(s) 3506
BlsI GCNGC 8 cut(s) 553, 1149, 1230, 1648, 2473, 2745, 2908, 4224
BmcAI AGTACT 1 cut(s) 2665
Bme18I GGWCC 5 cut(s) 849, 2221, 3145, 4042, 4264
BmgBI CACGTC 2 cut(s) 1052, 2926
BmiI GGNNCC 9 cut(s) 64, 633, 850, 851, 1099, 2386, 2910, 4044, 4427
BpiI GAAGAC 2 cut(s) 1630, 2069
BpmI CTGGAG 4 cut(s) 896, 967, 3891, 4225
Bpu10I CCTNAGC 1 cut(s) 2020
Bpu1102I GCTNAGC 1 cut(s) 3506
BpuEI CTTGAG 5 cut(s) 647, 1511, 2440, 4235, 4451
BsaBI GATNNNNATC 2 cut(s) 1968, 2340
BsaHI GRCGYC 1 cut(s) 3981
BsaI GGTCTC 2 cut(s) 1376, 3857
BsaJI CCNNGG 8 cut(s) 147, 1101, 1313, 1984, 2120, 3418, 4122, 4234
BsaXI ACNNNNNCTCC 8 cut(s) 869, 899, 1535, 1565, 4134, 4164, 4198, 4228
Bsc4I CCNNNNNNNGG 9 cut(s) 153, 196, 197, 628, 2259, 2398, 3291, 3785, 3959
Bse1I ACTGG 7 cut(s) 1136, 1219, 2801, 2897, 3889, 3907, 4208
Bse21I CCTNAGG 2 cut(s) 1574, 4038
Bse3DI GCAATG 3 cut(s) 3501, 3506, 3597
Bse8I GATNNNNATC 2 cut(s) 1968, 2340
BseDI CCNNGG 8 cut(s) 147, 1101, 1313, 1984, 2120, 3418, 4122, 4234
BseGI GGATG 5 cut(s) 744, 768, 1491, 2901, 3530
BseJI GATNNNNATC 2 cut(s) 1968, 2340
BseLI CCNNNNNNNGG 9 cut(s) 153, 196, 197, 628, 2259, 2398, 3291, 3785, 3959
BseMI GCAATG 3 cut(s) 3501, 3506, 3597
BseNI ACTGG 7 cut(s) 1136, 1219, 2801, 2897, 3889, 3907, 4208
BseRI GAGGAG 4 cut(s) 195, 3729, 4238, 4511
BseSI GKGCMC 1 cut(s) 2064
BseXI GCAGC 7 cut(s) 538, 1159, 1240, 1633, 2458, 2755, 4234
BsgI GTGCAG 2 cut(s) 396, 3633
Bsh1236I CGCG 1 cut(s) 2314
BshNI GGYRCC 1 cut(s) 62
BsiHKAI GWGCWC 5 cut(s) 2320, 2575, 3013, 3088, 4248
BsiSI CCGG 1 cut(s) 3964
BslFI GGGAC 3 cut(s) 613, 835, 2107
BslI CCNNNNNNNGG 9 cut(s) 153, 196, 197, 628, 2259, 2398, 3291, 3785, 3959
BsmAI GTCTC 6 cut(s) 37, 148, 1376, 1580, 3240, 3857
BsmBI CGTCTC 1 cut(s) 37
BsmFI GGGAC 3 cut(s) 613, 835, 2107
Bso31I GGTCTC 2 cut(s) 1376, 3857
Bsp1286I GDGCHC 8 cut(s) 1764, 2064, 2320, 2575, 3013, 3088, 4248, 4428
Bsp1720I GCTNAGC 1 cut(s) 3506
Bsp19I CCATGG 3 cut(s) 1313, 1984, 2120
BspACI CCGC 6 cut(s) 1519, 2906, 3602, 3817, 3847, 4015
BspFNI CGCG 1 cut(s) 2314
BspHI TCATGA 1 cut(s) 2490
BspLI GGNNCC 9 cut(s) 64, 633, 850, 851, 1099, 2386, 2910, 4044, 4427
BspMAI CTGCAG 3 cut(s) 265, 679, 4183
BspMI ACCTGC 2 cut(s) 2476, 3241
BspT107I GGYRCC 1 cut(s) 62
BspTI CTTAAG 1 cut(s) 2081
BspTNI GGTCTC 2 cut(s) 1376, 3857
BsrDI GCAATG 3 cut(s) 3501, 3506, 3597
BsrI ACTGG 7 cut(s) 1136, 1219, 2801, 2897, 3889, 3907, 4208
BssECI CCNNGG 8 cut(s) 147, 1101, 1313, 1984, 2120, 3418, 4122, 4234
BssNAI GTATAC 1 cut(s) 3725
BssNI GRCGYC 1 cut(s) 3981
BssSI CACGAG 2 cut(s) 3321, 3783
BssT1I CCWWGG 6 cut(s) 1101, 1313, 1984, 2120, 3418, 4122
Bst1107I GTATAC 1 cut(s) 3725
Bst2BI CACGAG 2 cut(s) 3321, 3783
Bst6I CTCTTC 4 cut(s) 2754, 3059, 3997, 4086
BstACI GRCGYC 1 cut(s) 3981
BstAFI CTTAAG 1 cut(s) 2081
BstAPI GCANNNNNTGC 1 cut(s) 4012
BstC8I GCNNGC 5 cut(s) 1684, 1688, 1737, 2316, 2850
BstDSI CCRYGG 3 cut(s) 1313, 1984, 2120
BstEII GGTNACC 3 cut(s) 185, 1669, 2243
BstENI CCTNNNNNAGG 2 cut(s) 626, 2396
BstF5I GGATG 5 cut(s) 744, 768, 1491, 2901, 3530
BstFNI CGCG 1 cut(s) 2314
BstH2I RGCGCY 1 cut(s) 1234
BstHHI GCGC 4 cut(s) 1233, 2314, 2596, 4372
BstMAI GTCTC 6 cut(s) 37, 148, 1376, 1580, 3240, 3857
BstNSI RCATGY 4 cut(s) 1306, 1519, 2208, 3861
BstPI GGTNACC 3 cut(s) 185, 1669, 2243
BstSFI CTRYAG 6 cut(s) 261, 675, 1866, 1881, 4179, 4305
BstSLI GKGCMC 1 cut(s) 2064
BstUI CGCG 1 cut(s) 2314
BstV1I GCAGC 7 cut(s) 538, 1159, 1240, 1633, 2458, 2755, 4234
BstV2I GAAGAC 2 cut(s) 1630, 2069
BstX2I RGATCY 7 cut(s) 1134, 1701, 1722, 2384, 2560, 3422, 3589
BstXI CCANNNNNNTGG 2 cut(s) 1108, 1241
BstYI RGATCY 7 cut(s) 1134, 1701, 1722, 2384, 2560, 3422, 3589
BstZ17I GTATAC 1 cut(s) 3725
Bsu36I CCTNAGG 2 cut(s) 1574, 4038
BsuI GTATCC 2 cut(s) 1822, 2118
BtgI CCRYGG 3 cut(s) 1313, 1984, 2120
BtrI CACGTC 2 cut(s) 1052, 2926
BtsCI GGATG 5 cut(s) 744, 768, 1491, 2901, 3530
BtsI GCAGTG 4 cut(s) 672, 977, 3234, 3913
BtsIMutI CAGTG 9 cut(s) 672, 977, 996, 1129, 2796, 3234, 3699, 3913, 4402
BveI ACCTGC 2 cut(s) 2476, 3241
Cac8I GCNNGC 5 cut(s) 1684, 1688, 1737, 2316, 2850
CaiI CAGNNNCTG 3 cut(s) 447, 1131, 2549
CciI TCATGA 1 cut(s) 2490
CfoI GCGC 4 cut(s) 1233, 2314, 2596, 4372
CseI GACGC 1 cut(s) 3970
CspCI CAANNNNNGTGG 4 cut(s) 2263, 2298, 3825, 3860
DraI TTTAAA 1 cut(s) 2557
DrdI GACNNNNNNGTC 1 cut(s) 4355
DseDI GACNNNNNNGTC 1 cut(s) 4355
EaeI YGGCCR 4 cut(s) 1620, 3470, 3776, 3961
Eam1104I CTCTTC 4 cut(s) 2754, 3059, 3997, 4086
EarI CTCTTC 4 cut(s) 2754, 3059, 3997, 4086
Ecl136II GAGCTC 2 cut(s) 2318, 3011
Eco130I CCWWGG 6 cut(s) 1101, 1313, 1984, 2120, 3418, 4122
Eco147I AGGCCT 2 cut(s) 2102, 4121
Eco24I GRGCYC 4 cut(s) 1764, 2320, 3013, 4428
Eco31I GGTCTC 2 cut(s) 1376, 3857
Eco32I GATATC 4 cut(s) 2070, 2338, 3439, 3988
Eco47I GGWCC 5 cut(s) 849, 2221, 3145, 4042, 4264
Eco53kI GAGCTC 2 cut(s) 2318, 3011
Eco57I CTGAAG 4 cut(s) 342, 1123, 3300, 3794
Eco81I CCTNAGG 2 cut(s) 1574, 4038
Eco91I GGTNACC 3 cut(s) 185, 1669, 2243
EcoICRI GAGCTC 2 cut(s) 2318, 3011
EcoNI CCTNNNNNAGG 2 cut(s) 626, 2396
EcoO109I RGGNCCY 4 cut(s) 849, 2221, 4042, 4264
EcoO65I GGTNACC 3 cut(s) 185, 1669, 2243
EcoRI GAATTC 2 cut(s) 1749, 4516
EcoRV GATATC 4 cut(s) 2070, 2338, 3439, 3988
EcoT14I CCWWGG 6 cut(s) 1101, 1313, 1984, 2120, 3418, 4122
EcoT22I ATGCAT 3 cut(s) 1308, 3157, 3804
EcoT38I GRGCYC 4 cut(s) 1764, 2320, 3013, 4428
ErhI CCWWGG 6 cut(s) 1101, 1313, 1984, 2120, 3418, 4122
Esp3I CGTCTC 1 cut(s) 37
FalI AAGNNNNNCTT 4 cut(s) 2018, 2050, 2730, 2762
FaqI GGGAC 3 cut(s) 613, 835, 2107
FauI CCCGC 2 cut(s) 3595, 3840
FauNDI CATATG 1 cut(s) 3619
FblI GTMKAC 3 cut(s) 492, 2688, 3724
Fnu4HI GCNGC 8 cut(s) 552, 1148, 1229, 1647, 2472, 2744, 2907, 4223
FokI GGATG 5 cut(s) 731, 775, 1498, 2908, 3517
FriOI GRGCYC 4 cut(s) 1764, 2320, 3013, 4428
Fsp4HI GCNGC 8 cut(s) 552, 1148, 1229, 1647, 2472, 2744, 2907, 4223
FspI TGCGCA 1 cut(s) 4371
GlaI GCGC 4 cut(s) 1232, 2313, 2595, 4371
GluI GCNGC 8 cut(s) 552, 1148, 1229, 1647, 2472, 2744, 2907, 4223
GsuI CTGGAG 4 cut(s) 896, 967, 3891, 4225
HaeII RGCGCY 1 cut(s) 1234
HapII CCGG 1 cut(s) 3964
HgaI GACGC 1 cut(s) 3970
HhaI GCGC 4 cut(s) 1233, 2314, 2596, 4372
Hin1I GRCGYC 1 cut(s) 3981
Hin6I GCGC 4 cut(s) 1231, 2312, 2594, 4370
HinP1I GCGC 4 cut(s) 1231, 2312, 2594, 4370
HincII GTYRAC 2 cut(s) 2031, 3918
HindII GTYRAC 2 cut(s) 2031, 3918
HindIII AAGCTT 3 cut(s) 1529, 2583, 3508
HpaII CCGG 1 cut(s) 3964
Hpy99I CGWCG 2 cut(s) 1053, 3986
HpyCH4IV ACGT 4 cut(s) 516, 1051, 2925, 3476
HpySE526I ACGT 4 cut(s) 516, 1051, 2925, 3476
Hsp92I GRCGYC 1 cut(s) 3981
HspAI GCGC 4 cut(s) 1231, 2312, 2594, 4370
KflI GGGWCCC 1 cut(s) 849
KpnI GGTACC 1 cut(s) 66
LmnI GCTCC 9 cut(s) 4, 2570, 2914, 3091, 3361, 3408, 3829, 4251, 4431
Lsp1109I GCAGC 7 cut(s) 538, 1159, 1240, 1633, 2458, 2755, 4234
MaeII ACGT 4 cut(s) 516, 1051, 2925, 3476
MfeI CAATTG 1 cut(s) 1902
MflI RGATCY 7 cut(s) 1134, 1701, 1722, 2384, 2560, 3422, 3589
MhlI GDGCHC 8 cut(s) 1764, 2064, 2320, 2575, 3013, 3088, 4248, 4428
MlsI TGGCCA 1 cut(s) 3778
MluNI TGGCCA 1 cut(s) 3778
MlyI GAGTC 4 cut(s) 453, 775, 887, 1478
MmeI TCCRAC 2 cut(s) 2962, 3322
Mox20I TGGCCA 1 cut(s) 3778
Mph1103I ATGCAT 3 cut(s) 1308, 3157, 3804
MroXI GAANNNNTTC 3 cut(s) 161, 813, 4381
MscI TGGCCA 1 cut(s) 3778
MslI CAYNNNNRTG 3 cut(s) 1028, 1239, 3655
Msp20I TGGCCA 1 cut(s) 3778
MspCI CTTAAG 1 cut(s) 2081
MspI CCGG 1 cut(s) 3964
MunI CAATTG 1 cut(s) 1902
MvnI CGCG 1 cut(s) 2314
NcoI CCATGG 3 cut(s) 1313, 1984, 2120
NdeI CATATG 1 cut(s) 3619
NlaIV GGNNCC 9 cut(s) 64, 633, 850, 851, 1099, 2386, 2910, 4044, 4427
NmeAIII GCCGAG 1 cut(s) 920
NmuCI GTSAC 9 cut(s) 185, 334, 1121, 1669, 2115, 2243, 2443, 3613, 4397
NsbI TGCGCA 1 cut(s) 4371
NsiI ATGCAT 3 cut(s) 1308, 3157, 3804
NspI RCATGY 4 cut(s) 1306, 1519, 2208, 3861
OliI CACNNNNGTG 2 cut(s) 1028, 1239
PagI TCATGA 1 cut(s) 2490
PceI AGGCCT 2 cut(s) 2102, 4121
PciI ACATGT 1 cut(s) 3857
PdmI GAANNNNTTC 3 cut(s) 161, 813, 4381
PfoI TCCNGGA 2 cut(s) 817, 3868
PkrI GCNGC 8 cut(s) 553, 1149, 1230, 1648, 2473, 2745, 2908, 4224
PleI GAGTC 4 cut(s) 452, 774, 886, 1477
PpsI GAGTC 4 cut(s) 452, 774, 886, 1477
PpuMI RGGWCCY 4 cut(s) 849, 2221, 4042, 4264
PscI ACATGT 1 cut(s) 3857
PshBI ATTAAT 1 cut(s) 932
PsiI TTATAA 1 cut(s) 2957
Psp124BI GAGCTC 2 cut(s) 2320, 3013
Psp1406I AACGTT 1 cut(s) 3476
Psp5II RGGWCCY 4 cut(s) 849, 2221, 4042, 4264
PspEI GGTNACC 3 cut(s) 185, 1669, 2243
PspN4I GGNNCC 9 cut(s) 64, 633, 850, 851, 1099, 2386, 2910, 4044, 4427
PspPPI RGGWCCY 4 cut(s) 849, 2221, 4042, 4264
PstI CTGCAG 3 cut(s) 265, 679, 4183
PstNI CAGNNNCTG 3 cut(s) 447, 1131, 2549
PsuI RGATCY 7 cut(s) 1134, 1701, 1722, 2384, 2560, 3422, 3589
RseI CAYNNNNRTG 3 cut(s) 1028, 1239, 3655
SacI GAGCTC 2 cut(s) 2320, 3013
SatI GCNGC 8 cut(s) 552, 1148, 1229, 1647, 2472, 2744, 2907, 4223
ScaI AGTACT 1 cut(s) 2665
SchI GAGTC 4 cut(s) 453, 775, 887, 1478
SduI GDGCHC 8 cut(s) 1764, 2064, 2320, 2575, 3013, 3088, 4248, 4428
SfcI CTRYAG 6 cut(s) 261, 675, 1866, 1881, 4179, 4305
SinI GGWCC 5 cut(s) 849, 2221, 3145, 4042, 4264
SmiMI CAYNNNNRTG 3 cut(s) 1028, 1239, 3655
SmlI CTYRAG 6 cut(s) 626, 1526, 2081, 2419, 4250, 4430
SmoI CTYRAG 6 cut(s) 626, 1526, 2081, 2419, 4250, 4430
SpeI ACTAGT 3 cut(s) 1238, 2660, 3719
SseBI AGGCCT 2 cut(s) 2102, 4121
SsiI CCGC 6 cut(s) 1519, 2906, 3602, 3817, 3847, 4015
SspI AATATT 1 cut(s) 3305
SstI GAGCTC 2 cut(s) 2320, 3013
StuI AGGCCT 2 cut(s) 2102, 4121
StyI CCWWGG 6 cut(s) 1101, 1313, 1984, 2120, 3418, 4122
TaiI ACGT 4 cut(s) 519, 1054, 2928, 3479
TaqI TCGA 5 cut(s) 1020, 1698, 2199, 3984, 4514
TatI WGTACW 4 cut(s) 2663, 2793, 4095, 4500
TauI GCSGC 1 cut(s) 2909
TscAI CASTG 9 cut(s) 679, 984, 996, 1136, 2796, 3234, 3699, 3913, 4402
TseFI GTSAC 9 cut(s) 185, 334, 1121, 1669, 2115, 2243, 2443, 3613, 4397
TseI GCWGC 7 cut(s) 551, 1147, 1228, 1646, 2471, 2743, 4222
Tsp45I GTSAC 9 cut(s) 185, 334, 1121, 1669, 2115, 2243, 2443, 3613, 4397
TspGWI ACGGA 3 cut(s) 1494, 3071, 3158
TspRI CASTG 9 cut(s) 679, 984, 996, 1136, 2796, 3234, 3699, 3913, 4402
Vha464I CTTAAG 1 cut(s) 2081
VpaK11BI GGWCC 5 cut(s) 849, 2221, 3145, 4042, 4264
VspI ATTAAT 1 cut(s) 932
XagI CCTNNNNNAGG 2 cut(s) 626, 2396
XapI RAATTY 8 cut(s) 161, 655, 1749, 1824, 1921, 2229, 4110, 4516
XbaI TCTAGA 4 cut(s) 305, 1327, 3425, 4078
XceI RCATGY 4 cut(s) 1306, 1519, 2208, 3861
XcmI CCANNNNNNNNNTGG 2 cut(s) 916, 3771
XmiI GTMKAC 3 cut(s) 492, 2688, 3724
XmnI GAANNNNTTC 3 cut(s) 161, 813, 4381
ZrmI AGTACT 1 cut(s) 2665
Zsp2I ATGCAT 3 cut(s) 1308, 3157, 3804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.