Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002271.1

Orthogroup ID

OG0000680

Physical Location & Seq

Genomic Coordinates Forward (+)

50979 .. 54099

Gene Structure 3121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002271.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

atgaaagagggtagagatacccttcttgaggaaccccttttgaatggtagtagaaattctagtataggtgacactgcaaaatcaaataagtccaaaggggatgcaattgtgaaaaccccttattcaaatgctgggattttcagcatcctcacattttcttggatgagtcctttaatcgcggtgggtaataagaaaacattaaaccttgaagatgttcctgaactagacaagggtgatagtgtagttgggtcctttccagtttttagaaataggctcgagtcggagtgtggtactcttagcagattgaccacacttcatttggtgaaggcgttaatcttctcagcctggagagagattctttggatagctttctttgtgcttctttacacaatggcttcttatgttggcccatatctaatcgacacattggtgcaatacctttatgggcgacgtgagtttgaatatgagggctatgctttagtttctgcctttttgttggcgaagctcgtggaatgcctctctcagaggcactggttctttagggcgcagcagataggagtaagaataagggctgtactggttaccatgatctataataaggggttgaccctgtcttgccagtcgaagcagtgccacactagtggtgagattatcaattttatgactgttgatgctgaaagggttggtgacttcgcttggtacatgcatgggccatggatggtcgttctacaagttgctttagccctcttaattttgtataaaaatcttggccttgctgcaattgcaacttttgttgcaataataattgttatgttggcaaatgttcctttggggaaattgcaagagaagtttcaggacaagttaatggagtcaatggacagaaggatgaatgcaacatcggagattttaaggaacatgcggattctcaagctgcaggcatgggagatgaagtttttgtctaagattattaacctcaggaagattgagacaggatggttacgaaagtttgtttatactgcagccatgaacaaatttgtcttctgggttgcccctacatttgtgtctgtggtcacttttcttgcttgcatgcttttggggaccccactggaatcagggaagatcttatctgcacttgcaacgttcagaattcttcaacagcccatcttcaatcttccagactcaatttcaatgatagcacagacaaaggtatcccttgatagaattgcatccttcctttctcttgatgagttgaagcctgatgttatagagaaccttcctagaggtagttctgatactgcaattgaaatattgaatgcaaatttctcttgggaattatcttcgcctaaccctacattgaaggatataaatatgaaagttagccatggtatgaaggttgctgtttgtggtactgttggctcaggaaaatcaagcttactttcttgtattctgggagaagttcccaagatatctgggactcttaagttgtgtggtacaaaagcctatgtttctcagtcaccatggatacagagtggtaaaatagaacaaaacatattgtttggtaaagagatggacagagaaaggtacgaggtggttcttgaagcatgttcgttgaagaaggacctcgaaattctatcatttggtgatcagacggttataggggaaaggggaatcaatttaagtggaggtcagaagcaaagaatacaaattgcacgagctttgtaccaagatgctgatatctatctgtttgatgatccttttagtgctgttgatgctcatacaggatctcacattttcaaggaatgcttgatggacctcttgtgttccaaaacagtaatctatgtcactcatcaagtggagttcttacctgctgctgatatcgtcttggtcatgaaagatggaaagatcactcaagttggaaagttcaatgacattcttaattcaggaactgattttatggatcttgtgggagcacacaatgaagctttgtctgcgcttgattttgttggggtagggccagttgaaaaaacaagcatcagcaaagaagataacaattcggcaagtactactggggctatccaaaaagtagacaacagagatattcaaggtagtaaaatagatgatttaggagagccaaaagggcagcttgttcaagaagaagagagaaagaaaggtaaggttgggttttcagtgtactggaaatacattaccgcaacgtatggaggagctcttgtgccttttatattacttgcacagattctctttcaactccttcaaattggaagcaattactggatggcttgggcaactcctgtgtcagcagacgtgaaatcaactgtttcaagctctacgcttataattgtctatgtggccttggctgttggaagttctttttgtatccttttaagatctctgcttcttgtaacagctgggtacaagacagccactatactcttcaataaaatgcatttgtgcatattccgtgctcccatgtcattcttcgatgccactccaagtggacgaatcttaaacagagcttctacagaccaaaatgcaatggacatgaacatttcaaatcaaattggggcctttgccaactcaatgatacagcttttaggaattattgcagtgatgtctcaggtgtcatggcaggttttcatcatatttatacctgtgattacagcctgtatttggtatcaggtaatcctttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0010290 GO:0015399 GO:0015405 GO:0015431 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042623 GO:0042626 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0055085 GO:0071997 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

902

Amino Acids

100.15

Weight (kDa)

8.33

Isoelectric Point (pI)

37.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71330 AT3G13080 AT3G13080 AT3G13080 AT3G13080 AT3G13080 AT3G13090 AT3G13100 AT3G13100
fragaria_vesca	FvH4_3g25430 FvH4_3g25430 FvH4_4g10780
malus_domestica	MD03G1188200.v1.1 MD11G1203300.v1.1 MD11G1203400.v1.1 MD11G1203500.v1.1 MD11G1203600.v1.1
prunus_persica	Prupe.4G235100_v2.0.a1 Prupe.4G235200_v2.0.a1 Prupe.4G235300_v2.0.a1 Prupe.I000500_v2.0.a1 Prupe.I000600_v2.0.a1 Prupe.I000700_v2.0.a1
pyrus_communis	pycom03g14070 pycom03g14080 pycom11g17640 pycom11g17650
rosa_chinensis	RchiOBHm_Chr4g0406401 RchiOBHm_Chr4g0406811 RchiOBHm_Chr5g0037441 RchiOBHm_Chr5g0037451 RchiOBHm_Chr5g0037461 RchiOBHm_Chr5g0046661 RchiOBHm_Chr5g0046671 RchiOBHm_Chr5g0046681
rosa_laevigata	RLG00000008754 RLG00000008756 RLG00000033782 RLG00000034430 RLG00000034431
rosa_multiflora	Rmu_co8175670.1_g000001 Rmu_sc0000292.1_g000013 Rmu_sc0000292.1_g000018 Rmu_sc0002271.1_g000015 Rmu_sc0002521.1_g000018 Rmu_sc0006408.1_g000011 Rmu_sc0008087.1_g000002
rosa_roxburghii	Rroxscaffold_1G00023630 Rroxscaffold_1G00034680 Rroxscaffold_1G00034700 Rroxscaffold_5G00351590 Rroxscaffold_6G00394770
rosa_rugosa	Rorug04G0074200 Rorug04G0074200 Rorug04G0084900 Rorug04G0084900 Rorug05G0230800 Rorug05G0230800
rosa_samantha	Rh1AG181100 Rh4AG141000 Rh4BG137500 Rh4BG146500 Rh5CG289500 Rh5CG289600 Rh5CG344900 Rh5CG345000 Rh7AG392100
rosa_wichuraiana	Rw0G000830 Rw1G003740 Rw4G011460 Rw4G011480 Rw5G023560 Rw5G023570 Rw5G028980 Rw5G028990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2354
Acc36I	ACCTGC	2 cut(s)	1873, 2638
AccI	GTMKAC	1 cut(s)	2085
AccII	CGCG	1 cut(s)	179
AciI	CCGC	3 cut(s)	179, 919, 2208
AclI	AACGTT	1 cut(s)	1139
AclWI	GGATC	3 cut(s)	1745, 1789, 1965
AcsI	RAATTY	5 cut(s)	55, 1031, 1146, 1318, 1626
AfiI	CCNNNNNNNGG	2 cut(s)	28, 2688
AflII	CTTAAG	1 cut(s)	1478
AhlI	ACTAGT	1 cut(s)	638
AjiI	CACGTC	2 cut(s)	452, 2323
AjnI	CCWGG	1 cut(s)	344
AleI	CACNNNNGTG	2 cut(s)	428, 639
Alw21I	GWGCWC	3 cut(s)	1972, 2227, 2485
Alw26I	GTCTC	2 cut(s)	980, 2637
AlwI	GGATC	3 cut(s)	1745, 1789, 1965
AlwNI	CAGNNNCTG	1 cut(s)	1946
Ama87I	CYCGRG	1 cut(s)	275
AoxI	GGCC	6 cut(s)	406, 710, 769, 2012, 2367, 2583
ApeKI	GCWGC	6 cut(s)	547, 776, 931, 1019, 1868, 2140
ApoI	RAATTY	5 cut(s)	55, 1031, 1146, 1318, 1626
Asp700I	GAANNNNTTC	1 cut(s)	213
AspLEI	GCGC	2 cut(s)	547, 1993
AspS9I	GGNCC	8 cut(s)	249, 407, 710, 1098, 1618, 1810, 2012, 2583
AsuHPI	GGTGA	7 cut(s)	80, 245, 334, 656, 698, 1506, 1652
AvaI	CYCGRG	1 cut(s)	275
AvaII	GGWCC	4 cut(s)	249, 1098, 1618, 1810
AxyI	CCTNAGG	1 cut(s)	974
BaeI	ACNNNNGTAYC	2 cut(s)	1191, 1224
BanII	GRGCYC	1 cut(s)	2227
BauI	CACGAG	2 cut(s)	506, 1710
BbsI	GAAGAC	1 cut(s)	1030
Bbv12I	GWGCWC	3 cut(s)	1972, 2227, 2485
BbvI	GCAGC	6 cut(s)	559, 763, 918, 1031, 1855, 2152
BccI	CCATC	7 cut(s)	712, 987, 1169, 1561, 1801, 1889, 2287
BciT130I	CCWGG	1 cut(s)	346
BciVI	GTATCC	3 cut(s)	1219, 1515, 2405
BclI	TGATCA	1 cut(s)	1642
BcoDI	GTCTC	2 cut(s)	980, 2637
BcuI	ACTAGT	1 cut(s)	638
BfaI	CTAG	4 cut(s)	60, 224, 639, 1278
BfmI	CTRYAG	3 cut(s)	932, 1017, 2538
BfrI	CTTAAG	1 cut(s)	1478
BfuAI	ACCTGC	2 cut(s)	1873, 2638
BfuI	GTATCC	3 cut(s)	1219, 1515, 2405
BglI	GCCNNNNNGGC	1 cut(s)	2137
BglII	AGATCT	2 cut(s)	1119, 2405
BisI	GCNGC	6 cut(s)	548, 777, 932, 1020, 1869, 2141
BlsI	GCNGC	6 cut(s)	549, 778, 933, 1021, 1870, 2142
BmcAI	AGTACT	1 cut(s)	2062
Bme1390I	CCNGG	1 cut(s)	346
Bme18I	GGWCC	4 cut(s)	249, 1098, 1618, 1810
BmeT110I	CYCGRG	1 cut(s)	275
BmgBI	CACGTC	2 cut(s)	452, 2323
BmgT120I	GGNCC	8 cut(s)	249, 407, 710, 1098, 1618, 1810, 2012, 2583
BmiI	GGNNCC	5 cut(s)	33, 250, 1099, 1100, 2584
BmrFI	CCNGG	1 cut(s)	346
BmrI	ACTGGG	1 cut(s)	2076
BmsI	GCATC	8 cut(s)	91, 153, 661, 1235, 1717, 1759, 2040, 2491
BmuI	ACTGGG	1 cut(s)	2076
BpiI	GAAGAC	1 cut(s)	1030
BpmI	CTGGAG	1 cut(s)	367
Bpu10I	CCTNAGC	1 cut(s)	1417
BpuEI	CTTGAG	3 cut(s)	47, 911, 1893
BsaBI	GATNNNNATC	1 cut(s)	1737
BsaJI	CCNNGG	4 cut(s)	713, 1381, 1517, 2370
BsaXI	ACNNNNNCTCC	4 cut(s)	935, 965, 2214, 2244
Bsc4I	CCNNNNNNNGG	2 cut(s)	28, 2688
Bse1I	ACTGG	9 cut(s)	257, 536, 582, 619, 1110, 2015, 2071, 2198, 2294
Bse21I	CCTNAGG	1 cut(s)	974
Bse3DI	GCAATG	1 cut(s)	2559
Bse8I	GATNNNNATC	1 cut(s)	1737
BseBI	CCWGG	1 cut(s)	346
BseDI	CCNNGG	4 cut(s)	713, 1381, 1517, 2370
BseGI	GGATG	8 cut(s)	106, 144, 168, 723, 891, 998, 1226, 2298
BseJI	GATNNNNATC	1 cut(s)	1737
BseLI	CCNNNNNNNGG	2 cut(s)	28, 2688
BseMI	GCAATG	1 cut(s)	2559
BseMII	CTCAG	6 cut(s)	354, 536, 988, 1431, 1523, 2648
BseNI	ACTGG	9 cut(s)	257, 536, 582, 619, 1110, 2015, 2071, 2198, 2294
BseRI	GAGGAG	1 cut(s)	2235
BseXI	GCAGC	6 cut(s)	559, 763, 918, 1031, 1855, 2152
BseYI	CCCAGC	2 cut(s)	131, 2426
BsgI	GTGCAG	1 cut(s)	1113
Bsh1236I	CGCG	1 cut(s)	179
BshFI	GGCC	6 cut(s)	408, 712, 771, 2014, 2369, 2585
BsiHKAI	GWGCWC	3 cut(s)	1972, 2227, 2485
BsiHKCI	CYCGRG	1 cut(s)	275
BslFI	GGGAC	2 cut(s)	1111, 1486
BslI	CCNNNNNNNGG	2 cut(s)	28, 2688
BsmAI	GTCTC	2 cut(s)	980, 2637
BsmFI	GGGAC	2 cut(s)	1111, 1486
BsmI	GAATGC	4 cut(s)	518, 895, 1318, 1805
BsnI	GGCC	6 cut(s)	408, 712, 771, 2014, 2369, 2585
BsoBI	CYCGRG	1 cut(s)	275
Bsp1286I	GDGCHC	3 cut(s)	1972, 2227, 2485
Bsp143I	GATC	8 cut(s)	588, 1119, 1642, 1750, 1781, 1902, 1957, 2405
Bsp19I	CCATGG	3 cut(s)	713, 1381, 1517
BspACI	CCGC	3 cut(s)	179, 919, 2208
BspANI	GGCC	6 cut(s)	408, 712, 771, 2014, 2369, 2585
BspCNI	CTCAG	6 cut(s)	353, 535, 987, 1430, 1522, 2647
BspFNI	CGCG	1 cut(s)	179
BspHI	TCATGA	1 cut(s)	1887
BspLI	GGNNCC	5 cut(s)	33, 250, 1099, 1100, 2584
BspMAI	CTGCAG	2 cut(s)	936, 1021
BspMI	ACCTGC	2 cut(s)	1873, 2638
BspPI	GGATC	3 cut(s)	1745, 1789, 1965
BspTI	CTTAAG	1 cut(s)	1478
BsrDI	GCAATG	1 cut(s)	2559
BsrI	ACTGG	9 cut(s)	257, 536, 582, 619, 1110, 2015, 2071, 2198, 2294
BssECI	CCNNGG	4 cut(s)	713, 1381, 1517, 2370
BssMI	GATC	8 cut(s)	588, 1119, 1642, 1750, 1781, 1902, 1957, 2405
BssSI	CACGAG	2 cut(s)	506, 1710
BssT1I	CCWWGG	4 cut(s)	713, 1381, 1517, 2370
Bst2BI	CACGAG	2 cut(s)	506, 1710
Bst2UI	CCWGG	1 cut(s)	346
Bst4CI	ACNGT	5 cut(s)	667, 1411, 1651, 1831, 2335
Bst6I	CTCTTC	2 cut(s)	2151, 2456
BstAFI	CTTAAG	1 cut(s)	1478
BstC8I	GCNNGC	3 cut(s)	936, 1084, 1088
BstDEI	CTNAG	8 cut(s)	296, 340, 522, 960, 974, 1417, 1509, 2634
BstDSI	CCRYGG	3 cut(s)	713, 1381, 1517
BstEII	GGTNACC	1 cut(s)	580
BstENI	CCTNNNNNAGG	1 cut(s)	26
BstF5I	GGATG	8 cut(s)	106, 144, 168, 723, 891, 998, 1226, 2298
BstFNI	CGCG	1 cut(s)	179
BstHHI	GCGC	2 cut(s)	547, 1993
BstKTI	GATC	8 cut(s)	591, 1122, 1645, 1753, 1784, 1905, 1960, 2408
BstMAI	GTCTC	2 cut(s)	980, 2637
BstMBI	GATC	8 cut(s)	588, 1119, 1642, 1750, 1781, 1902, 1957, 2405
BstMWI	GCNNNNNNNGC	4 cut(s)	782, 1769, 1988, 2137
BstNI	CCWGG	1 cut(s)	346
BstNSI	RCATGY	4 cut(s)	706, 919, 1090, 1605
BstPI	GGTNACC	1 cut(s)	580
BstSCI	CCNGG	1 cut(s)	344
BstSFI	CTRYAG	3 cut(s)	932, 1017, 2538
BstUI	CGCG	1 cut(s)	179
BstV1I	GCAGC	6 cut(s)	559, 763, 918, 1031, 1855, 2152
BstV2I	GAAGAC	1 cut(s)	1030
BstX2I	RGATCY	4 cut(s)	1119, 1781, 1957, 2405
BstXI	CCANNNNNNTGG	1 cut(s)	641
BstYI	RGATCY	4 cut(s)	1119, 1781, 1957, 2405
Bsu36I	CCTNAGG	1 cut(s)	974
BsuI	GTATCC	3 cut(s)	1219, 1515, 2405
BsuRI	GGCC	6 cut(s)	408, 712, 771, 2014, 2369, 2585
BtgI	CCRYGG	3 cut(s)	713, 1381, 1517
BtrI	CACGTC	2 cut(s)	452, 2323
BtsCI	GGATG	8 cut(s)	106, 144, 168, 723, 891, 998, 1226, 2298
BtsI	GCAGTG	3 cut(s)	72, 635, 2631
BtsIMutI	CAGTG	6 cut(s)	72, 529, 635, 1103, 2193, 2631
BveI	ACCTGC	2 cut(s)	1873, 2638
Cac8I	GCNNGC	3 cut(s)	936, 1084, 1088
CaiI	CAGNNNCTG	1 cut(s)	1946
CciI	TCATGA	1 cut(s)	1887
CfoI	GCGC	2 cut(s)	547, 1993
Cfr13I	GGNCC	8 cut(s)	249, 407, 710, 1098, 1618, 1810, 2012, 2583
CspCI	CAANNNNNGTGG	2 cut(s)	1660, 1695
DdeI	CTNAG	8 cut(s)	296, 340, 522, 960, 974, 1417, 1509, 2634
DpnI	GATC	8 cut(s)	590, 1121, 1644, 1752, 1783, 1904, 1959, 2407
DpnII	GATC	8 cut(s)	588, 1119, 1642, 1750, 1781, 1902, 1957, 2405
Eam1104I	CTCTTC	2 cut(s)	2151, 2456
EarI	CTCTTC	2 cut(s)	2151, 2456
Ecl136II	GAGCTC	1 cut(s)	2225
Eco130I	CCWWGG	4 cut(s)	713, 1381, 1517, 2370
Eco24I	GRGCYC	1 cut(s)	2227
Eco32I	GATATC	3 cut(s)	1467, 1735, 1876
Eco47I	GGWCC	4 cut(s)	249, 1098, 1618, 1810
Eco53kI	GAGCTC	1 cut(s)	2225
Eco81I	CCTNAGG	1 cut(s)	974
Eco88I	CYCGRG	1 cut(s)	275
Eco91I	GGTNACC	1 cut(s)	580
EcoICRI	GAGCTC	1 cut(s)	2225
EcoNI	CCTNNNNNAGG	1 cut(s)	26
EcoO109I	RGGNCCY	4 cut(s)	249, 1098, 1618, 2583
EcoO65I	GGTNACC	1 cut(s)	580
EcoRI	GAATTC	1 cut(s)	1146
EcoRII	CCWGG	1 cut(s)	344
EcoRV	GATATC	3 cut(s)	1467, 1735, 1876
EcoT14I	CCWWGG	4 cut(s)	713, 1381, 1517, 2370
EcoT22I	ATGCAT	2 cut(s)	708, 2466
EcoT38I	GRGCYC	1 cut(s)	2227
ErhI	CCWWGG	4 cut(s)	713, 1381, 1517, 2370
FalI	AAGNNNNNCTT	4 cut(s)	1787, 1819, 2127, 2159
FaqI	GGGAC	2 cut(s)	1111, 1486
FbaI	TGATCA	1 cut(s)	1642
FblI	GTMKAC	1 cut(s)	2085
Fnu4HI	GCNGC	6 cut(s)	548, 777, 932, 1020, 1869, 2141
FokI	GGATG	8 cut(s)	113, 131, 175, 730, 898, 1005, 1213, 2305
FriOI	GRGCYC	1 cut(s)	2227
Fsp4HI	GCNGC	6 cut(s)	548, 777, 932, 1020, 1869, 2141
FspBI	CTAG	4 cut(s)	60, 224, 639, 1278
GlaI	GCGC	2 cut(s)	546, 1992
GluI	GCNGC	6 cut(s)	548, 777, 932, 1020, 1869, 2141
GsaI	CCCAGC	2 cut(s)	135, 2430
GsuI	CTGGAG	1 cut(s)	367
HaeIII	GGCC	6 cut(s)	408, 712, 771, 2014, 2369, 2585
HhaI	GCGC	2 cut(s)	547, 1993
Hin6I	GCGC	2 cut(s)	545, 1991
HinP1I	GCGC	2 cut(s)	545, 1991
HincII	GTYRAC	1 cut(s)	606
HindII	GTYRAC	1 cut(s)	606
HindIII	AAGCTT	2 cut(s)	1429, 1980
HphI	GGTGA	7 cut(s)	80, 245, 334, 656, 698, 1506, 1652
Hpy166II	GTNNAC	4 cut(s)	606, 2086, 2191, 2516
Hpy188I	TCNGA	7 cut(s)	283, 525, 901, 1145, 1291, 1647, 1689
Hpy8I	GTNNAC	4 cut(s)	606, 2086, 2191, 2516
Hpy99I	CGWCG	1 cut(s)	453
HpyAV	CCTTC	9 cut(s)	32, 319, 876, 1240, 1283, 1351, 1384, 1609, 2279
HpyCH4III	ACNGT	5 cut(s)	667, 1411, 1651, 1831, 2335
HpyCH4IV	ACGT	4 cut(s)	451, 1139, 2213, 2322
HpyF10VI	GCNNNNNNNGC	4 cut(s)	782, 1769, 1988, 2137
HpyF3I	CTNAG	8 cut(s)	296, 340, 522, 960, 974, 1417, 1509, 2634
HpySE526I	ACGT	4 cut(s)	451, 1139, 2213, 2322
HspAI	GCGC	2 cut(s)	545, 1991
KflI	GGGWCCC	1 cut(s)	1098
Ksp22I	TGATCA	1 cut(s)	1642
Kzo9I	GATC	8 cut(s)	588, 1119, 1642, 1750, 1781, 1902, 1957, 2405
LmnI	GCTCC	3 cut(s)	1967, 2222, 2488
Lsp1109I	GCAGC	6 cut(s)	559, 763, 918, 1031, 1855, 2152
LweI	GCATC	8 cut(s)	91, 153, 661, 1235, 1717, 1759, 2040, 2491
MaeI	CTAG	4 cut(s)	60, 224, 639, 1278
MaeII	ACGT	4 cut(s)	451, 1139, 2213, 2322
MaeIII	GTNAC	8 cut(s)	68, 580, 686, 996, 1069, 1512, 1840, 2419
MalI	GATC	8 cut(s)	590, 1121, 1644, 1752, 1783, 1904, 1959, 2407
MboI	GATC	8 cut(s)	588, 1119, 1642, 1750, 1781, 1902, 1957, 2405
MfeI	CAATTG	3 cut(s)	105, 780, 1299
MflI	RGATCY	4 cut(s)	1119, 1781, 1957, 2405
MhlI	GDGCHC	3 cut(s)	1972, 2227, 2485
MlyI	GAGTC	5 cut(s)	175, 287, 878, 1172, 1468
MmeI	TCCRAC	3 cut(s)	261, 1894, 2359
Mph1103I	ATGCAT	2 cut(s)	708, 2466
MroXI	GAANNNNTTC	1 cut(s)	213
MslI	CAYNNNNRTG	2 cut(s)	428, 639
MspA1I	CMGCKG	1 cut(s)	2426
MspCI	CTTAAG	1 cut(s)	1478
MspR9I	CCNGG	1 cut(s)	346
MunI	CAATTG	3 cut(s)	105, 780, 1299
Mva1269I	GAATGC	4 cut(s)	518, 895, 1318, 1805
MvaI	CCWGG	1 cut(s)	346
MvnI	CGCG	1 cut(s)	179
MwoI	GCNNNNNNNGC	4 cut(s)	782, 1769, 1988, 2137
NcoI	CCATGG	3 cut(s)	713, 1381, 1517
NdeII	GATC	8 cut(s)	588, 1119, 1642, 1750, 1781, 1902, 1957, 2405
NlaIV	GGNNCC	5 cut(s)	33, 250, 1099, 1100, 2584
NmuCI	GTSAC	5 cut(s)	68, 686, 1069, 1512, 1840
NsiI	ATGCAT	2 cut(s)	708, 2466
NspI	RCATGY	4 cut(s)	706, 919, 1090, 1605
OliI	CACNNNNGTG	2 cut(s)	428, 639
PaeI	GCATGC	1 cut(s)	1090
PaeR7I	CTCGAG	1 cut(s)	275
PagI	TCATGA	1 cut(s)	1887
PctI	GAATGC	4 cut(s)	518, 895, 1318, 1805
PdmI	GAANNNNTTC	1 cut(s)	213
PfeI	GAWTC	6 cut(s)	355, 922, 1109, 1668, 2254, 2520
PflFI	GACNNNGTC	1 cut(s)	610
PkrI	GCNGC	6 cut(s)	549, 778, 933, 1021, 1870, 2142
PleI	GAGTC	5 cut(s)	174, 286, 877, 1172, 1468
PpsI	GAGTC	5 cut(s)	174, 286, 877, 1172, 1468
PpuMI	RGGWCCY	3 cut(s)	249, 1098, 1618
PsiI	TTATAA	1 cut(s)	2354
Psp124BI	GAGCTC	1 cut(s)	2227
Psp1406I	AACGTT	1 cut(s)	1139
Psp5II	RGGWCCY	3 cut(s)	249, 1098, 1618
Psp6I	CCWGG	1 cut(s)	344
PspEI	GGTNACC	1 cut(s)	580
PspFI	CCCAGC	2 cut(s)	131, 2426
PspGI	CCWGG	1 cut(s)	344
PspN4I	GGNNCC	5 cut(s)	33, 250, 1099, 1100, 2584
PspPI	GGNCC	8 cut(s)	249, 407, 710, 1098, 1618, 1810, 2012, 2583
PspPPI	RGGWCCY	3 cut(s)	249, 1098, 1618
PspXI	VCTCGAGB	1 cut(s)	275
PstI	CTGCAG	2 cut(s)	936, 1021
PstNI	CAGNNNCTG	1 cut(s)	1946
PsuI	RGATCY	4 cut(s)	1119, 1781, 1957, 2405
PsyI	GACNNNGTC	1 cut(s)	610
PvuII	CAGCTG	1 cut(s)	2426
RseI	CAYNNNNRTG	2 cut(s)	428, 639
SacI	GAGCTC	1 cut(s)	2227
SatI	GCNGC	6 cut(s)	548, 777, 932, 1020, 1869, 2141
Sau3AI	GATC	8 cut(s)	588, 1119, 1642, 1750, 1781, 1902, 1957, 2405
Sau96I	GGNCC	8 cut(s)	249, 407, 710, 1098, 1618, 1810, 2012, 2583
ScaI	AGTACT	1 cut(s)	2062
SchI	GAGTC	5 cut(s)	175, 287, 878, 1172, 1468
ScrFI	CCNGG	1 cut(s)	346
SduI	GDGCHC	3 cut(s)	1972, 2227, 2485
SfaNI	GCATC	8 cut(s)	91, 153, 661, 1235, 1717, 1759, 2040, 2491
SfcI	CTRYAG	3 cut(s)	932, 1017, 2538
Sfr274I	CTCGAG	1 cut(s)	275
SinI	GGWCC	4 cut(s)	249, 1098, 1618, 1810
SlaI	CTCGAG	1 cut(s)	275
SmiMI	CAYNNNNRTG	2 cut(s)	428, 639
SmlI	CTYRAG	5 cut(s)	26, 275, 926, 1478, 1908
SmoI	CTYRAG	5 cut(s)	26, 275, 926, 1478, 1908
SpeI	ACTAGT	1 cut(s)	638
SphI	GCATGC	1 cut(s)	1090
SsiI	CCGC	3 cut(s)	179, 919, 2208
SspI	AATATT	1 cut(s)	1308
SspMI	CTAG	4 cut(s)	60, 224, 639, 1278
SstI	GAGCTC	1 cut(s)	2227
StyD4I	CCNGG	1 cut(s)	344
StyI	CCWWGG	4 cut(s)	713, 1381, 1517, 2370
TaaI	ACNGT	5 cut(s)	667, 1411, 1651, 1831, 2335
TaiI	ACGT	4 cut(s)	454, 1142, 2216, 2325
TaqI	TCGA	5 cut(s)	276, 420, 623, 1623, 2499
TatI	WGTACW	3 cut(s)	574, 2060, 2190
TfiI	GAWTC	6 cut(s)	355, 922, 1109, 1668, 2254, 2520
TscAI	CASTG	6 cut(s)	79, 536, 635, 1110, 2193, 2631
TseFI	GTSAC	5 cut(s)	68, 686, 1069, 1512, 1840
TseI	GCWGC	6 cut(s)	547, 776, 931, 1019, 1868, 2140
Tsp45I	GTSAC	5 cut(s)	68, 686, 1069, 1512, 1840
TspGWI	ACGGA	1 cut(s)	2468
TspRI	CASTG	6 cut(s)	79, 536, 635, 1110, 2193, 2631
Tth111I	GACNNNGTC	1 cut(s)	610
Vha464I	CTTAAG	1 cut(s)	1478
VpaK11BI	GGWCC	4 cut(s)	249, 1098, 1618, 1810
XagI	CCTNNNNNAGG	1 cut(s)	26
XapI	RAATTY	5 cut(s)	55, 1031, 1146, 1318, 1626
XceI	RCATGY	4 cut(s)	706, 919, 1090, 1605
XcmI	CCANNNNNNNNNTGG	1 cut(s)	316
XhoI	CTCGAG	1 cut(s)	275
XmiI	GTMKAC	1 cut(s)	2085
XmnI	GAANNNNTTC	1 cut(s)	213
XspI	CTAG	4 cut(s)	60, 224, 639, 1278
ZrmI	AGTACT	1 cut(s)	2062
Zsp2I	ATGCAT	2 cut(s)	708, 2466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.