MD11G1203300.v1.1

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
29538662 .. 29544521
5860 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1203300.v1.1.491

Sequence Viewer

Length: 4548 bp
ATGGAGTTTATTGGTTCATCAAACCACGGTACTCTCTCAACCTTCTTCTCACACTACGCATCACTGATGCATCCAGGCACCCATTTTCTGCTCAAACCAGTTTTTATACGTGGGTTTTCTGGTTCATTACACATAGTGTTGGTATTTGTGTTGTTCTTCTCTTGGTTGTGGAGGAAATTCAAGGGGGGTGATGGAGGAGGAGGAGAGGCTCCGAAACAGAGGTTTTCGAATAGTCAAAATTCGTACTACAAGCAGGCTTTAATTTGTGCTTTCAGTGTTTCTGGCTTTAGTCTTGTTTTTTGTTTATTGAACTACTTTTGTTGGTACAAAAATGGTTGGTCTGATGAAAAAGTAGTGACCCTTTTGGATTTAGCTGTTAGAACACTCTCTTGGGGTGCAGTTTGTGTTTATTTGCATACCCAATTCTCCAATTCTGCTGAATCCATTAAGTTCCCAAACTTTCTGAGAGTTTGGTGGGGTTTCTATTTCTCTATTTCTTGCTATTCCCTTGTCATTGACATTGTTCTTCACAAGGACCGTGTTTCGTTGCCTGTTAAATCTTTGGTTTTCGATGTTGTCTGTGTTCTTTCGGGTTTGTTTTTCATGTATGTGGGGTTTTTGGGGAAGAAAGAGGGCAGAGATTCTGTTCTTGAGGAACCCCTTTTGAACGGTAATCGTAGTACTGGTGTAGGTAATGATAGAGAGTCAAATAAGTCGAGAGGGGGAACAAATGTTAACCCTTATTCGAACGCTGGAATTTTCAGCATTCTTACTTTTGCTTGGATGGGTCCTCTAATTGCGGCTGGCAATAAGAAGGCGTTAGACCTTGAGGATGTTCCTGAACTAGATAAGGTTGACAGTGTATTTGGGTCCTATCCTCGTTTTAAAAGTAGGCTTCATGTGGGGTGTGGTGGGAGCGGCAGAGTTACCACACTTCATCTGGTGAAGGCATTAATCTTCTCAGCCTGGAAAGAGATTCTCTTGACCGCTTCATTTGGGATTTTTTACACAATGGCGTCTTTTGTCGGTCCATATCTGATCGACACACTTGTTCAATACCTCTATGGGCGACGGCAGTTCAAAAATGAAGGCTATGTTTTGGTTTCTGCATTTTTGTTTGCAAAGCTCGTGGAGTGCCTCACTCAAAGGCACTGGTTTTTTAAGACGCAACAGGCAGGAGTAAGAATCCGAGCAGTACTTGTTACAGCCATCTACAACAAGGGTTTGACCTTGTCATGCCAGTCCAAGCAGGGCCACACAAGCGGTGAGATTATCAATTTTATGACTGTCGATGCTGAGAGGATCGGTGACTTCATTTGGTACATACACTATCCATGGATCATCCTTGTACAAGTTGGCTTCGCCCTAGTGATTTTGTACATAAATCTTGGTCTTGCAGCTATCGCAACATTGATTGCAACGATAATTGTTATGTTGGCAAATGTTCCCCTAGGGTCCTTGCAGAAGAAGTTTCAGGACAAGTTAATGAAGTCAAAAGATAAAAGGATGAAGGCAACATCTGAGATCTTGAGGAACATGAGAATTCTCAAGCTTCAAGCATGGGAGATGAAGTTTCTCTCTAAAATTAATGAGCTCCGGAAGTCAGAGGCAGGATGGTTACGAAAGTTTGTTTACACTTGGGCCATGACCTCATTTGTCTTCTGGGGTGCCCCAACATTTGTGTCTGTGGTCACTTTTGTTTCTTGCACGCTTTTGGGAATCCCACTCGAATCCGGGAAGATCTTATCTGCACTTGCAACGTTCAGGATTCTTCAAGAGCCTATTTACTGTCTTCCAGATACAATTTCAATGATAGCACAAACTAAGGTATCTCTTGATAGAATTGCATCATTCCTTTGTCTTGATGACTTGCAGCCGGATGTTATAGAGAACATCCCAAGAGGTAGTTCTGATACAGCAGTTGAGATAGTCGATGGGAATTTCTCTTGGGATTTATCTTCCCCTAATCCAACATTGAAGGATATAAATTTCAAAGTGAGCCGTGGTATGAGAGTTGCTGTTTGTGGTACTGTTGGCTCGGGCAAGTCGAGCTTACTTTCTTGCATTCTGGGAGAAGTTCCGAAGATATCTGGGACTCTAAAGTTGTGTGGGACCAAGGCCTATGTTTCTCAGTCACCATGGATACAGAGTGGAAAAATAGAAGAAAACATATTGTTTGGTAAACAGATGGACAGAGAAAGTTATGAGAGGGTTCTAGAAGCGTGTTCGTTAAAGAAGGACCTGGAAGTTCTATCGTTTGGTGATCAGACGGTTATAGGGGAGAGAGGAATCAATTTAAGTGGCGGGCAGAAGCAAAGAATACAAATTGCACGTGCCATGTACCAAGATGCTGATATTTATCTATTTGATGATCCTTTTAGTGCCGTTGATGCTCATACAGGATCCCACCTTTTTAAGGAATGCTTGCTAGGCCTGTTGAGTTCGAAAACAGTAATTTATGTCACTCATCAAGTGGAGTTCTTGCCGGCTGCTGATCTTATATTGGTCATGAAGGATGGAAGGATTAGTCAAGCTGGAAAGTTCAATGATATTCTTAATTCCGGAACTGATTTTGAGGAACTTGTGGGAGCGCATGAGGAAGCTTTGTCCGCACTTAATTCTGTAGAAGAGGGGCCTGCTGAACAAATAAATGTTAGCAAAGAAGAAGGAAATTCGGCTAGTACTGATGGGGTTGTCCAAAAAAAAGAAAGCAGTGATGTTCAAAATAGTAAAACAGATGATGTAGGTGAGCTAAAGGGGCAGATTGTTCAAGAAGAAGAGAGAGAGAAAGGTAGAGTTGGGTTTTCAGTGTACTGGAAGTATCTCACCACAGCTTACGGAGGAGCTCTTGTGCCTTTTATATTGCTTGGACAAATTCTGTTTCAGATCCTTCAAATTGGAAGCAATTACTGGATGGCTTGGGCAACTCCCGTGTCTGAGGATGCGAAACCTGCGGTTACAAGCTCTACAATGATAATTGTGTACGTTGCTTTGGCTATTGGAAGTTCTTTTTGTGTTCTCTTCAGATCCATGTTTCTTGCAACAGCTGGGTACAAGACAGCAACTATACTCTTTAGTAAAATGCACCATTGCATTTTCCGTGCTCCAATGTCTTTCTTTGATTCGACTCCAAGTGGACGAATCCTTAACAGAGCTTCTACTGACCAAAATGTTGTGGACATGAACATGTCGATTCAACTTGGGGCCCTTGCTAACTCAACAATCCAGCTTGTAGGAATTATTGCAGTGATGTCACAGGTTGCATGGCAGGTTTTCATCATTTTTATCCCCGTGGTTGCAATCTGTATCTGGTATCAGCAATACTACATTCCTTCAGCAAGAGAACTAGCACGGTTGGTTGGAGTATGCAAATCTCCAGTGATACAACATTTTGCCGAAACAATTTCCGGGTCAACAACTATTAGAAGCTTCGATCAAGAATCAAGATTCAGGGATACAAATATGAAATTGAACGATAGTTTTGGTCGGCCTAAGTTCCATACTGCAGCTGCAATGGAATGGCTATGTTTTCGCTTGGATATGTTGTCATCTATCACATTTGGATTTTCTTTGATTTTCTTGATCTCTATTCCAGCGGGGGTAATTGATCCAGGCATTGCGGGATTGGCTGTCACATATGGACTAAATCTAAACATGTTGCAAGCTCGGTGTATATGGAATCTTTGCAATGTAGAGAACAGAATAATATCAGTGGAGAGATTACTACAGTACACTAATATTCCCAGTGAACCTCCTCTTGTAATAGAATCCAATCAGCCGGATCGTTCTTGGCCATTACATGGAGAAGTTGATATCCGTGATCTTCAGGTTCGCTATGCTCCACACATGCCACTTGTGTTGCGGGGTCTCACATGTACCTTTCCTGGGGGAATGAAAACTGGGATTGTGGGGAGAACTGGCAGTGGCAAATCAACTCTCATACAGACCCTTTTCCGGATTGTGAATCCTTCTGCCGGCCAGATTTTGATAGATGGTATTGATATCTGTTCAATTGGACTGCATGACTTGAGGTCTAGGCTGAGCATTATCCCTCAGGACCCAACCATGTTTGAAGGGACTGTAAGAAGCAATCTGGACCCGCTTGAAGAGTACACGGACAAACAAATTTGGGAGGCCCTCGAAAAGTGCCAACTTGGAGATGAAGTTAGGAAAAAGGAAGGAAAGCTGGATTCCACAGTTAGCGAGAACGGAGAGAACTGGAGTATGGGTCAGAGACAGCTGGTCTGCCTTGGCCGTGTGCTCCTGAAGAAAAGTAAGGTTTTGGTGCTTGATGAAGCTACTGCATCGGTTGATACGGCTACAGATAATCTGATCCAGCAGACCCTTCGACAACACTTTACTGACTGCACAGTCATTACTATTGCGCATCGTATAACTTCTGTTCTTGACAGTGACATGGTTCTGCTTCTAAGTCACGGGCTTATTGAGGAATATAATTCTCCAGCAAGATTGCTGGAAAACAAATCATCGTCATTCGCTCAGCTCGTGGCAGAGTACACAACGAGATCGAATTCTAGTTACGAGTAG

Protein Analysis

1516

Amino Acids

168.53

Weight (kDa)

7.81

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 332 - 594 3.1e-26 ABC transporter transmembrane region
ABC_tran PF00005 659 - 793 1.5e-20 ABC transporter
ABC_membrane PF00664 954 - 1195 1.2e-30 ABC transporter transmembrane region
ABC_tran PF00005 1287 - 1435 1.3e-27 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 4370
Acc16I TGCGCA 1 cut(s) 4386
Acc36I ACCTGC 2 cut(s) 2959, 3259
AccB1I GGYRCC 2 cut(s) 77, 1667
AccB7I CCANNNNNTGG 1 cut(s) 3800
AccBSI CCGCTC 1 cut(s) 918
AccIII TCCGGA 3 cut(s) 1596, 2561, 3954
AclI AACGTT 1 cut(s) 1760
AcoI YGGCCR 3 cut(s) 3791, 3976, 4252
AcuI CTGAAG 4 cut(s) 3007, 3318, 3809, 4286
AcvI CACGTG 1 cut(s) 2333
AcyI GRCGYC 1 cut(s) 1016
AdeI CACNNNGTG 1 cut(s) 136
AfiI CCNNNNNNNGG 5 cut(s) 2416, 3800, 3885, 3954, 3974
AflIII ACRYGT 3 cut(s) 3186, 3654, 3872
AhdI GACNNNNNGTC 2 cut(s) 4030, 4241
AjnI CCWGG 5 cut(s) 73, 965, 2241, 3610, 3883
AjuI GAANNNNNNNTTGG 4 cut(s) 373, 405, 1891, 1923
Alw21I GWGCWC 4 cut(s) 1596, 2848, 3106, 4263
Alw26I GTCTC 2 cut(s) 3872, 4228
Ama87I CYCGRG 1 cut(s) 2038
Aor13HI TCCGGA 3 cut(s) 1596, 2561, 3954
ApaI GGGCCC 1 cut(s) 3208
ApeKI GCWGC 5 cut(s) 1397, 1873, 2489, 3506, 3509
ArsI GACNNNNNNTTYG 2 cut(s) 848, 880
AseI ATTAAT 2 cut(s) 953, 1587
AspA2I CCTAGG 1 cut(s) 1450
AspLEI GCGC 2 cut(s) 2593, 4387
AsuC2I CCSGG 2 cut(s) 1735, 3409
AsuHPI GGTGA 8 cut(s) 200, 955, 1277, 1319, 2127, 2273, 2759, 2818
AsuII TTCGAA 3 cut(s) 227, 746, 2444
AvaI CYCGRG 1 cut(s) 2038
AvaII GGWCC 9 cut(s) 535, 788, 870, 1028, 1455, 2112, 2239, 4057, 4096
AvrII CCTAGG 1 cut(s) 1450
AxyI CCTNAGG 1 cut(s) 4053
BaeGI GKGCMC 2 cut(s) 1672, 3208
BaeI ACNNNNGTAYC 4 cut(s) 1812, 1845, 1905, 1938
BalI TGGCCA 1 cut(s) 3793
BamHI GGATCC 1 cut(s) 2402
BanI GGYRCC 2 cut(s) 77, 1667
BanII GRGCYC 3 cut(s) 1596, 2848, 3208
BauI CACGAG 2 cut(s) 1127, 4505
BbrPI CACGTG 1 cut(s) 2333
BbsI GAAGAC 2 cut(s) 1651, 1784
Bbv12I GWGCWC 4 cut(s) 1596, 2848, 3106, 4263
BbvI GCAGC 5 cut(s) 1409, 1885, 2476, 3496, 3518
BceAI ACGGC 5 cut(s) 1088, 1986, 2369, 4239, 4332
BcgI CGANNNNNNTGC 2 cut(s) 4328, 4362
BciT130I CCWGG 5 cut(s) 75, 967, 2243, 3612, 3885
BciVI GTATCC 2 cut(s) 2136, 3448
BclI TGATCA 1 cut(s) 2263
BcnI CCSGG 2 cut(s) 1735, 3409
BcoDI GTCTC 2 cut(s) 3872, 4228
BfaI CTAG 9 cut(s) 845, 1367, 1451, 2216, 2429, 2679, 3347, 4035, 4536
BfmI CTRYAG 4 cut(s) 2622, 3504, 3725, 4320
BfuAI ACCTGC 2 cut(s) 2959, 3259
BfuI GTATCC 2 cut(s) 2136, 3448
BglII AGATCT 2 cut(s) 1524, 1740
BisI GCNGC 7 cut(s) 801, 919, 1398, 1874, 2490, 3507, 3510
BlnI CCTAGG 1 cut(s) 1450
BlpI GCTNAGC 2 cut(s) 4040, 4500
BlsI GCNGC 7 cut(s) 802, 920, 1399, 1875, 2491, 3508, 3511
BmcAI AGTACT 3 cut(s) 682, 1197, 2683
Bme1390I CCNGG 7 cut(s) 75, 967, 1735, 2243, 3409, 3612, 3885
Bme18I GGWCC 9 cut(s) 535, 788, 870, 1028, 1455, 2112, 2239, 4057, 4096
BmeRI GACNNNNNGTC 2 cut(s) 4030, 4241
BmeT110I CYCGRG 1 cut(s) 2038
BmrFI CCNGG 7 cut(s) 75, 967, 1735, 2243, 3409, 3612, 3885
BmrI ACTGGG 2 cut(s) 3738, 3909
BmuI ACTGGG 2 cut(s) 3738, 3909
BpiI GAAGAC 2 cut(s) 1651, 1784
BpmI CTGGAG 3 cut(s) 3360, 4240, 4446
Bpu1102I GCTNAGC 2 cut(s) 4040, 4500
Bpu14I TTCGAA 3 cut(s) 227, 746, 2444
BpuEI CTTGAG 5 cut(s) 671, 848, 1532, 1549, 4048
BpuMI CCSGG 2 cut(s) 1735, 3409
BsaAI YACGTR 2 cut(s) 110, 2333
BsaBI GATNNNNATC 1 cut(s) 2358
BsaHI GRCGYC 1 cut(s) 1016
BsaI GGTCTC 1 cut(s) 3872
BsaJI CCNNGG 9 cut(s) 25, 1334, 1450, 2002, 2115, 2138, 3291, 3884, 4249
BsaWI WCCGGW 3 cut(s) 1596, 2561, 3954
BsaXI ACNNNNNCTCC 8 cut(s) 1556, 1586, 2835, 2865, 4149, 4179, 4213, 4243
Bsc4I CCNNNNNNNGG 5 cut(s) 2416, 3800, 3885, 3954, 3974
Bse118I RCCGGY 2 cut(s) 2485, 3974
Bse21I CCTNAGG 1 cut(s) 4053
Bse3DI GCAATG 4 cut(s) 3088, 3519, 3615, 3694
Bse8I GATNNNNATC 1 cut(s) 2358
BseAI TCCGGA 3 cut(s) 1596, 2561, 3954
BseBI CCWGG 5 cut(s) 75, 967, 2243, 3612, 3885
BseDI CCNNGG 9 cut(s) 25, 1334, 1450, 2002, 2115, 2138, 3291, 3884, 4249
BseJI GATNNNNATC 1 cut(s) 2358
BseLI CCNNNNNNNGG 5 cut(s) 2416, 3800, 3885, 3954, 3974
BseMI GCAATG 4 cut(s) 3088, 3519, 3615, 3694
BseMII CTCAG 9 cut(s) 455, 975, 1287, 1512, 2144, 2928, 4031, 4067, 4514
BseRI GAGGAG 5 cut(s) 210, 213, 216, 2856, 3744
BseSI GKGCMC 2 cut(s) 1672, 3208
BseXI GCAGC 5 cut(s) 1409, 1885, 2476, 3496, 3518
BseYI CCCAGC 1 cut(s) 3047
BsgI GTGCAG 3 cut(s) 417, 1734, 4351
BshNI GGYRCC 2 cut(s) 77, 1667
BsiHKAI GWGCWC 4 cut(s) 1596, 2848, 3106, 4263
BsiHKCI CYCGRG 1 cut(s) 2038
BsiSI CCGG 9 cut(s) 1597, 1734, 1877, 2486, 2562, 3408, 3779, 3955, 3975
BslFI GGGAC 3 cut(s) 2107, 2125, 4090
BslI CCNNNNNNNGG 5 cut(s) 2416, 3800, 3885, 3954, 3974
BsmAI GTCTC 2 cut(s) 3872, 4228
BsmFI GGGAC 3 cut(s) 2107, 2125, 4090
BsmI GAATGC 3 cut(s) 765, 2064, 2426
Bso31I GGTCTC 1 cut(s) 3872
BsoBI CYCGRG 1 cut(s) 2038
Bsp119I TTCGAA 3 cut(s) 227, 746, 2444
Bsp120I GGGCCC 1 cut(s) 3204
Bsp1286I GDGCHC 6 cut(s) 1596, 1672, 2848, 3106, 3208, 4263
Bsp13I TCCGGA 3 cut(s) 1596, 2561, 3954
Bsp1407I TGTACA 2 cut(s) 1348, 1377
Bsp1720I GCTNAGC 2 cut(s) 4040, 4500
Bsp19I CCATGG 2 cut(s) 1334, 2138
BspCNI CTCAG 9 cut(s) 456, 974, 1288, 1513, 2143, 2929, 4032, 4066, 4513
BspEI TCCGGA 3 cut(s) 1596, 2561, 3954
BspHI TCATGA 1 cut(s) 2508
BspMAI CTGCAG 1 cut(s) 3508
BspMI ACCTGC 2 cut(s) 2959, 3259
BspT104I TTCGAA 3 cut(s) 227, 746, 2444
BspT107I GGYRCC 2 cut(s) 77, 1667
BspTNI GGTCTC 1 cut(s) 3872
BsrBI CCGCTC 1 cut(s) 918
BsrDI GCAATG 4 cut(s) 3088, 3519, 3615, 3694
BsrFI RCCGGY 2 cut(s) 2485, 3974
BsrGI TGTACA 2 cut(s) 1348, 1377
BssAI RCCGGY 2 cut(s) 2485, 3974
BssECI CCNNGG 9 cut(s) 25, 1334, 1450, 2002, 2115, 2138, 3291, 3884, 4249
BssNI GRCGYC 1 cut(s) 1016
BssSI CACGAG 2 cut(s) 1127, 4505
BssT1I CCWWGG 5 cut(s) 1334, 1450, 2115, 2138, 4249
Bst2BI CACGAG 2 cut(s) 1127, 4505
Bst2UI CCWGG 5 cut(s) 75, 967, 2243, 3612, 3885
Bst6I CTCTTC 4 cut(s) 2622, 2772, 3026, 4101
BstACI GRCGYC 1 cut(s) 1016
BstAUI TGTACA 2 cut(s) 1348, 1377
BstBAI YACGTR 2 cut(s) 110, 2333
BstBI TTCGAA 3 cut(s) 227, 746, 2444
BstC8I GCNNGC 9 cut(s) 255, 805, 1709, 2306, 2426, 2487, 2637, 3663, 3976
BstDSI CCRYGG 5 cut(s) 25, 1334, 2002, 2138, 3291
BstENI CCTNNNNNAGG 1 cut(s) 2414
BstHHI GCGC 2 cut(s) 2593, 4387
BstMAI GTCTC 2 cut(s) 3872, 4228
BstMWI GCNNNNNNNGC 9 cut(s) 1260, 1403, 2049, 2390, 2430, 2609, 2758, 2951, 3626
BstNI CCWGG 5 cut(s) 75, 967, 2243, 3612, 3885
BstNSI RCATGY 4 cut(s) 3190, 3658, 3850, 3876
BstSCI CCNGG 7 cut(s) 73, 965, 1733, 2241, 3407, 3610, 3883
BstSFI CTRYAG 4 cut(s) 2622, 3504, 3725, 4320
BstSLI GKGCMC 2 cut(s) 1672, 3208
BstV1I GCAGC 5 cut(s) 1409, 1885, 2476, 3496, 3518
BstV2I GAAGAC 2 cut(s) 1651, 1784
BstX2I RGATCY 5 cut(s) 1524, 1740, 2402, 2886, 3026
BstYI RGATCY 5 cut(s) 1524, 1740, 2402, 2886, 3026
Bsu36I CCTNAGG 1 cut(s) 4053
BsuI GTATCC 2 cut(s) 2136, 3448
BtgI CCRYGG 5 cut(s) 25, 1334, 2002, 2138, 3291
BtsI GCAGTG 3 cut(s) 2719, 3252, 3928
BveI ACCTGC 2 cut(s) 2959, 3259
Cac8I GCNNGC 9 cut(s) 255, 805, 1709, 2306, 2426, 2487, 2637, 3663, 3976
CciI TCATGA 1 cut(s) 2508
CfoI GCGC 2 cut(s) 2593, 4387
Cfr10I RCCGGY 2 cut(s) 2485, 3974
CseI GACGC 2 cut(s) 1005, 1174
CspCI CAANNNNNGTGG 6 cut(s) 1110, 1145, 2281, 2316, 3840, 3875
DraI TTTAAA 1 cut(s) 886
DraIII CACNNNGTG 1 cut(s) 136
DrdI GACNNNNNNGTC 1 cut(s) 4370
DriI GACNNNNNGTC 2 cut(s) 4030, 4241
DseDI GACNNNNNNGTC 1 cut(s) 4370
EaeI YGGCCR 3 cut(s) 3791, 3976, 4252
Eam1104I CTCTTC 4 cut(s) 2622, 2772, 3026, 4101
Eam1105I GACNNNNNGTC 2 cut(s) 4030, 4241
EarI CTCTTC 4 cut(s) 2622, 2772, 3026, 4101
Ecl136II GAGCTC 2 cut(s) 1594, 2846
Eco130I CCWWGG 5 cut(s) 1334, 1450, 2115, 2138, 4249
Eco147I AGGCCT 2 cut(s) 2120, 2433
Eco24I GRGCYC 3 cut(s) 1596, 2848, 3208
Eco31I GGTCTC 1 cut(s) 3872
Eco32I GATATC 3 cut(s) 2088, 3814, 4003
Eco47I GGWCC 9 cut(s) 535, 788, 870, 1028, 1455, 2112, 2239, 4057, 4096
Eco53kI GAGCTC 2 cut(s) 1594, 2846
Eco57I CTGAAG 4 cut(s) 3007, 3318, 3809, 4286
Eco72I CACGTG 1 cut(s) 2333
Eco81I CCTNAGG 1 cut(s) 4053
Eco88I CYCGRG 1 cut(s) 2038
EcoICRI GAGCTC 2 cut(s) 1594, 2846
EcoNI CCTNNNNNAGG 1 cut(s) 2414
EcoO109I RGGNCCY 9 cut(s) 788, 870, 1455, 2239, 2633, 3204, 3205, 4057, 4135
EcoRI GAATTC 2 cut(s) 1542, 4531
EcoRII CCWGG 5 cut(s) 73, 965, 2241, 3610, 3883
EcoRV GATATC 3 cut(s) 2088, 3814, 4003
EcoT14I CCWWGG 5 cut(s) 1334, 1450, 2115, 2138, 4249
EcoT22I ATGCAT 1 cut(s) 72
EcoT38I GRGCYC 3 cut(s) 1596, 2848, 3208
ErhI CCWWGG 5 cut(s) 1334, 1450, 2115, 2138, 4249
FalI AAGNNNNNCTT 4 cut(s) 2036, 2068, 2408, 2440
FaqI GGGAC 3 cut(s) 2107, 2125, 4090
FauI CCCGC 5 cut(s) 2297, 3589, 3613, 3855, 4107
FauNDI CATATG 1 cut(s) 3637
FbaI TGATCA 1 cut(s) 2263
Fnu4HI GCNGC 7 cut(s) 801, 919, 1398, 1874, 2490, 3507, 3510
FriOI GRGCYC 3 cut(s) 1596, 2848, 3208
Fsp4HI GCNGC 7 cut(s) 801, 919, 1398, 1874, 2490, 3507, 3510
FspBI CTAG 9 cut(s) 845, 1367, 1451, 2216, 2429, 2679, 3347, 4035, 4536
FspI TGCGCA 1 cut(s) 4386
GlaI GCGC 2 cut(s) 2592, 4386
GluI GCNGC 7 cut(s) 801, 919, 1398, 1874, 2490, 3507, 3510
GsaI CCCAGC 1 cut(s) 3051
GsuI CTGGAG 3 cut(s) 3360, 4240, 4446
HapII CCGG 9 cut(s) 1597, 1734, 1877, 2486, 2562, 3408, 3779, 3955, 3975
HgaI GACGC 2 cut(s) 1005, 1174
HhaI GCGC 2 cut(s) 2593, 4387
Hin1I GRCGYC 1 cut(s) 1016
Hin6I GCGC 2 cut(s) 2591, 4385
HinP1I GCGC 2 cut(s) 2591, 4385
HincII GTYRAC 3 cut(s) 736, 856, 3414
HindII GTYRAC 3 cut(s) 736, 856, 3414
HindIII AAGCTT 3 cut(s) 1550, 2601, 3427
HpaI GTTAAC 1 cut(s) 736
HpaII CCGG 9 cut(s) 1597, 1734, 1877, 2486, 2562, 3408, 3779, 3955, 3975
HphI GGTGA 8 cut(s) 200, 955, 1277, 1319, 2127, 2273, 2759, 2818
Hpy99I CGWCG 1 cut(s) 1074
HpyCH4IV ACGT 4 cut(s) 109, 1760, 2332, 2985
HpyF10VI GCNNNNNNNGC 9 cut(s) 1260, 1403, 2049, 2390, 2430, 2609, 2758, 2951, 3626
HpySE526I ACGT 4 cut(s) 109, 1760, 2332, 2985
Hsp92I GRCGYC 1 cut(s) 1016
HspAI GCGC 2 cut(s) 2591, 4385
Kpn2I TCCGGA 3 cut(s) 1596, 2561, 3954
KroI GCCGGC 2 cut(s) 2485, 3974
KroNI GCCGGC 2 cut(s) 2487, 3976
Ksp22I TGATCA 1 cut(s) 2263
KspAI GTTAAC 1 cut(s) 736
LmnI GCTCC 8 cut(s) 214, 915, 1599, 2588, 2843, 3109, 3844, 4266
Lsp1109I GCAGC 5 cut(s) 1409, 1885, 2476, 3496, 3518
MaeI CTAG 9 cut(s) 845, 1367, 1451, 2216, 2429, 2679, 3347, 4035, 4536
MaeII ACGT 4 cut(s) 109, 1760, 2332, 2985
MbiI CCGCTC 1 cut(s) 918
MfeI CAATTG 1 cut(s) 4011
MflI RGATCY 5 cut(s) 1524, 1740, 2402, 2886, 3026
MhlI GDGCHC 6 cut(s) 1596, 1672, 2848, 3106, 3208, 4263
MlsI TGGCCA 1 cut(s) 3793
MluNI TGGCCA 1 cut(s) 3793
MlyI GAGTC 3 cut(s) 713, 2089, 3121
MmeI TCCRAC 2 cut(s) 1994, 3340
Mox20I TGGCCA 1 cut(s) 3793
Mph1103I ATGCAT 1 cut(s) 72
MroI TCCGGA 3 cut(s) 1596, 2561, 3954
MroNI GCCGGC 2 cut(s) 2485, 3974
MscI TGGCCA 1 cut(s) 3793
MslI CAYNNNNRTG 2 cut(s) 608, 3185
Msp20I TGGCCA 1 cut(s) 3793
MspA1I CMGCKG 4 cut(s) 3047, 3509, 3596, 4240
MspI CCGG 9 cut(s) 1597, 1734, 1877, 2486, 2562, 3408, 3779, 3955, 3975
MspR9I CCNGG 7 cut(s) 75, 967, 1735, 2243, 3409, 3612, 3885
MunI CAATTG 1 cut(s) 4011
Mva1269I GAATGC 3 cut(s) 765, 2064, 2426
MvaI CCWGG 5 cut(s) 75, 967, 2243, 3612, 3885
MwoI GCNNNNNNNGC 9 cut(s) 1260, 1403, 2049, 2390, 2430, 2609, 2758, 2951, 3626
NaeI GCCGGC 2 cut(s) 2487, 3976
NciI CCSGG 2 cut(s) 1735, 3409
NcoI CCATGG 2 cut(s) 1334, 2138
NdeI CATATG 1 cut(s) 3637
NgoMIV GCCGGC 2 cut(s) 2485, 3974
NmuCI GTSAC 9 cut(s) 355, 1307, 1690, 2133, 2461, 3252, 3631, 4412, 4433
NsbI TGCGCA 1 cut(s) 4386
NsiI ATGCAT 1 cut(s) 72
NspI RCATGY 4 cut(s) 3190, 3658, 3850, 3876
NspV TTCGAA 3 cut(s) 227, 746, 2444
PagI TCATGA 1 cut(s) 2508
PceI AGGCCT 2 cut(s) 2120, 2433
PciI ACATGT 3 cut(s) 3186, 3654, 3872
PcsI WCGNNNNNNNCGW 2 cut(s) 2045, 4503
PctI GAATGC 3 cut(s) 765, 2064, 2426
PdiI GCCGGC 2 cut(s) 2487, 3976
PflFI GACNNNGTC 1 cut(s) 1231
PflMI CCANNNNNTGG 1 cut(s) 3800
PfoI TCCNGGA 1 cut(s) 1733
PkrI GCNGC 7 cut(s) 802, 920, 1399, 1875, 2491, 3508, 3511
PleI GAGTC 3 cut(s) 712, 2089, 3121
PmaCI CACGTG 1 cut(s) 2333
PmlI CACGTG 1 cut(s) 2333
PpsI GAGTC 3 cut(s) 712, 2089, 3121
Ppu21I YACGTR 2 cut(s) 110, 2333
PpuMI RGGWCCY 5 cut(s) 788, 870, 1455, 2239, 4057
PscI ACATGT 3 cut(s) 3186, 3654, 3872
PshBI ATTAAT 2 cut(s) 953, 1587
Psp124BI GAGCTC 2 cut(s) 1596, 2848
Psp1406I AACGTT 1 cut(s) 1760
Psp5II RGGWCCY 5 cut(s) 788, 870, 1455, 2239, 4057
Psp6I CCWGG 5 cut(s) 73, 965, 2241, 3610, 3883
PspCI CACGTG 1 cut(s) 2333
PspFI CCCAGC 1 cut(s) 3047
PspGI CCWGG 5 cut(s) 73, 965, 2241, 3610, 3883
PspOMI GGGCCC 1 cut(s) 3204
PspPPI RGGWCCY 5 cut(s) 788, 870, 1455, 2239, 4057
PstI CTGCAG 1 cut(s) 3508
PsuI RGATCY 5 cut(s) 1524, 1740, 2402, 2886, 3026
PsyI GACNNNGTC 1 cut(s) 1231
PvuII CAGCTG 3 cut(s) 3047, 3509, 4240
RseI CAYNNNNRTG 2 cut(s) 608, 3185
SacI GAGCTC 2 cut(s) 1596, 2848
SatI GCNGC 7 cut(s) 801, 919, 1398, 1874, 2490, 3507, 3510
ScaI AGTACT 3 cut(s) 682, 1197, 2683
SchI GAGTC 3 cut(s) 713, 2089, 3121
ScrFI CCNGG 7 cut(s) 75, 967, 1735, 2243, 3409, 3612, 3885
SduI GDGCHC 6 cut(s) 1596, 1672, 2848, 3106, 3208, 4263
SfcI CTRYAG 4 cut(s) 2622, 3504, 3725, 4320
SfuI TTCGAA 3 cut(s) 227, 746, 2444
SinI GGWCC 9 cut(s) 535, 788, 870, 1028, 1455, 2112, 2239, 4057, 4096
SmiMI CAYNNNNRTG 2 cut(s) 608, 3185
SmlI CTYRAG 5 cut(s) 650, 827, 1528, 1547, 4027
SmoI CTYRAG 5 cut(s) 650, 827, 1528, 1547, 4027
SseBI AGGCCT 2 cut(s) 2120, 2433
SspI AATATT 1 cut(s) 3739
SspMI CTAG 9 cut(s) 845, 1367, 1451, 2216, 2429, 2679, 3347, 4035, 4536
SstI GAGCTC 2 cut(s) 1596, 2848
StuI AGGCCT 2 cut(s) 2120, 2433
StyD4I CCNGG 7 cut(s) 73, 965, 1733, 2241, 3407, 3610, 3883
StyI CCWWGG 5 cut(s) 1334, 1450, 2115, 2138, 4249
TaiI ACGT 4 cut(s) 112, 1763, 2335, 2988
TaqII GACCGA 1 cut(s) 1016
TatI WGTACW 9 cut(s) 680, 1195, 1348, 1377, 2681, 2811, 3729, 4110, 4515
TauI GCSGC 2 cut(s) 803, 921
TseFI GTSAC 9 cut(s) 355, 1307, 1690, 2133, 2461, 3252, 3631, 4412, 4433
TseI GCWGC 5 cut(s) 1397, 1873, 2489, 3506, 3509
Tsp45I GTSAC 9 cut(s) 355, 1307, 1690, 2133, 2461, 3252, 3631, 4412, 4433
TspGWI ACGGA 5 cut(s) 2853, 3089, 3806, 4130, 4224
Tth111I GACNNNGTC 1 cut(s) 1231
Van91I CCANNNNNTGG 1 cut(s) 3800
VpaK11BI GGWCC 9 cut(s) 535, 788, 870, 1028, 1455, 2112, 2239, 4057, 4096
VspI ATTAAT 2 cut(s) 953, 1587
XagI CCTNNNNNAGG 1 cut(s) 2414
XbaI TCTAGA 1 cut(s) 2215
XceI RCATGY 4 cut(s) 3190, 3658, 3850, 3876
XcmI CCANNNNNNNNNTGG 1 cut(s) 937
XmaJI CCTAGG 1 cut(s) 1450
XspI CTAG 9 cut(s) 845, 1367, 1451, 2216, 2429, 2679, 3347, 4035, 4536
ZrmI AGTACT 3 cut(s) 682, 1197, 2683
Zsp2I ATGCAT 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.