Rroxscaffold_1G00034700

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
50420165 .. 50425284
5120 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00034700.1

Sequence Viewer

Length: 3063 bp
ATGAGTCCTTTAATCGCTGTTGGCAATAAGAAAACATTAAACCTTGAAGATGTTCCTGGACTAGACAAGGGCGATAGTGTAGTTGGGTCCCTTCCAATTTTTAGAAATAAGCTTGAGTCAGAGTGTGGTACTCTGAGCAGAGTTACCATACTTCCTCTGGTGAAGGCATTAATCGTCTTGGCCTGGAGAGAGATTCTTTGGACAGCTTTGTTTGCACTGCTTTCCACAATGGCTTCTTACGTCGGCCCATATCTAATCGACACCTTTGTGCAATACCTCTATGGGCGACGTGAGTTCAGAAATGAGGGCTATGCTCTAGTTTCTGCATTTTTGGGAGCGAAGGTTGTGGAGTGCCTCTGTCACAGGCACTGGTTCTTCAGGGGGCAGCAGATAGGAGTAAGAATAAGAGCTGTACTGGTTGCCATGATCTATAATAAGGGTTTGAGCCTGTCTTGCCAGTCCAAGCAGTGCCACACTAGTGGTGAGATTATCAATTTTATGACTGTTGATGCTGAGAGGGTTGGCCAATTCACTTGGTGCATGCATGAACCATGGACCATCATTCTACAAGTTGCTTTGGCCCTCTTTATTTTGTATAAAAATCTTGGTCTTGGTGCAATTGCAACTTTAGTTGCAACTGTAATGGTTATGTTGGCAAATGTTCCTTTCCGAAAATTGCAAGAGAAGTTTCAAAAGAAACTAATGGAGTCAAAGGATGGAAGGATGAAGGCGACATCTGAGATTTTAAGGAACATGCGGATTCTCAAGCTTCAAGCATGGGAGATGAAGTTTTTGTCTAAAATTATTGACCTCAGGAAGATTGAGACAGAATGGTTACAAAAGTTTCTTTACACTTCGGCCATGACCTCATTTGTCTTCTGGGCTGCCCCTACATTTGTGTCTGTGCCTGATGTTATAGAGAACCTTCCTAGAGGTAGTTCTGATACTGCAATTGAGATAGTAGATGCAAATTTCTCTTGGGATTTATCTTCACCTAACCCCACATTGAAGGATATAAATCTCAAAATTAGCCATGGTATGAGGGTTGCTGTTTGTGGTACTGTTGGCTCAGGCAAGTCGACCTTACTTTCTTGTATTCTGGGAGAAGTGCCCAAGATATCTGGTTTTCTTAAGTTGTGTGGGACAAAGGCCTATGTTTCTCAGTCACCGTGGATACAGAGTGGCAAGATAGAAGAAAACATATTGTTTGGTAAAGTGATGGACAGAGAAAGGTATGAGGGGGTTCTTGAAGCATGTTCGTTGAAGAAAGACCTGGAAATTCTACCATTTGGTGACCAGACCATTATAGGGGAGAGGGGAATCAATTTAAGTGGAGGGCAGAAGCAAAGAATACAAATTGCACGAGCTCTGTACCAAGATGCTGATATCTATCTGTTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGATCCCACCTTTTCAAGGAATGTTTGATGGCCCTCTTGAGTTCCAAAACAGTAATCTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGATATTATCTTGGTCATGAAAGATGGAAGGATCACTCAAGCCGGAAAGTTCAATGACATTATTAATGCAGGAACTGATTTTAAAGATCTTGTGGGAGCACACAATGAAGCTTTGTCTGTGCTTGATTCTGTTGGGGTAGGGCTGGGTGAAAAAACAAGCATCAGCAAGGAAGATAACAATTCGACTGGTACTAATGGGGCTGTCAAAGAAGTAGACAACAACGATGTTGAGGATTGTAAAATCGATGATTCAGGTGTGCCGAAAGGGCAGCTTGTTCAAGAAGAAGAGAGAGAGAAAGGTAAGGTTGGGTTCTCAGTGTACTGGAAATACATTACCACAGCGTACGGAGACGTGAAACCTACTGTTACAAGCTCTATGCTTATAATTGTCTATGTGGCTTTGGCTGTTGGAAGTTCCTTATGTGTACTTTTCAGAGCTCTGCTTCTTGTAACGGCAGGGTACAAGACAGCCACTATACTCTTCCATAAAATGCACTTGTGCATTTTCCGTGCTCCCATGTCATTCTTCGATGCCACTCCAAGTGGAAGAATCTTAAACAGAGCTTCTACAGACCAAAATGCATTGGATTTGAACATATCAAATCAAGTTGCCTCCTTTGCCTTCACAATGATACGTAATACTTCTGACTTTGTCAGAATTCTGTTACTTGGCATTGCGGGTTTAGCCGTCACATATGGACTTACCCTAAACACTTTACAAACTATGCTTATATGGAATCTTTGCAATATGGAGAACAAGATAATATCAGTGGAGAGAATACTACAATATACTACTAGTATACCAAGTGAGCCTCCTCTGGTAATTGAATCTAGTAGACCAGATCATTCCTGGCCATCACGAGGAAAAGTTGATATGCATGATATTCAGGTGCGGTATGCTCCACACTTGCCACTTGTGTTACGGGGTCTCACATGTACCATTCCTGGAGGAATGAAAACTGGGATTGTGGGGAGAACTGGCAGTGGAAAGTCAACTCTTATACAAACTCTTTTCCGAATCGTTGATCCTGATGCTGGCCGGATTTTGATAGATGGCATCGATATCTCTTCTATTGGATTGCATGATCTGCGGTCTAATCTAAGCATTATCCCCTCAGGACCCAACCATGCCTTGGATAAGTGCCAACTTGGAGATGAAGTTAGGAAGAAAGAAGGGAAGCTGGATGCTGCAGTTAGTGAAAATGGAGAGAACTGGAGTATGGGTCAGAGGCAGCTCGTTTGCCTGGGCCGTGTGCTCCTCAAGAAAAGTAAGGTCCTGGTGCTTGATGAAGCTACTGCATCTGTTGATACTGCTACAGATAATCTGATTCAGCAGACCCTTCGGCATCACTTCTCAGACTGTACCGTCATTACTATTGCGCACAGAATATCTTCTGTTCTTGACAGTGACATGGTTCTTCTTCTAAGTAATGGGCTCCTTGAGGAATGTGATTCTCCTGCAAGATTGCTAGAAAACAAGTTATCAGCTTTTGCCCAACTTGTAGCGGAGTACACAATGAGATCGAATTCCACTCTTTAG

Protein Analysis

1020

Amino Acids

112.61

Weight (kDa)

7.5

Isoelectric Point (pI)

34.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 69 - 301 2.3e-20 ABC transporter transmembrane region
ABC_tran PF00005 336 - 470 5.7e-20 ABC transporter
ABC_membrane PF00664 611 - 750 2e-09 ABC transporter transmembrane region
ABC_tran PF00005 815 - 941 6.2e-21 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1907
AasI GACNNNNNNGTC 1 cut(s) 2888
Acc16I TGCGCA 1 cut(s) 2904
Acc36I ACCTGC 1 cut(s) 1525
AccB7I CCANNNNNTGG 1 cut(s) 2656
AccI GTMKAC 4 cut(s) 1079, 1737, 2323, 2359
AciI CCGC 5 cut(s) 757, 2201, 2416, 2614, 3029
AclWI GGATC 5 cut(s) 1397, 1428, 1441, 1562, 2543
AcoI YGGCCR 4 cut(s) 523, 858, 2375, 2560
AcsI RAATTY 4 cut(s) 970, 1278, 2181, 3049
AcuI CTGAAG 1 cut(s) 361
AdeI CACNNNGTG 1 cut(s) 537
AfiI CCNNNNNNNGG 5 cut(s) 1308, 1447, 2384, 2558, 2656
AflII CTTAAG 1 cut(s) 1130
AflIII ACRYGT 1 cut(s) 2456
AhlI ACTAGT 2 cut(s) 476, 2318
AjiI CACGTC 2 cut(s) 290, 1876
AjnI CCWGG 7 cut(s) 55, 182, 1272, 2372, 2467, 2766, 2799
AleI CACNNNNGTG 2 cut(s) 266, 477
Alw21I GWGCWC 5 cut(s) 1369, 1624, 1963, 2038, 2781
Alw26I GTCTC 3 cut(s) 818, 1866, 2456
AlwI GGATC 5 cut(s) 1397, 1428, 1441, 1562, 2543
AlwNI CAGNNNCTG 2 cut(s) 369, 1598
ApeKI GCWGC 6 cut(s) 385, 884, 1520, 1792, 2711, 2755
ApoI RAATTY 4 cut(s) 970, 1278, 2181, 3049
AseI ATTAAT 2 cut(s) 170, 1587
Asp700I GAANNNNTTC 2 cut(s) 51, 2914
AspLEI GCGC 1 cut(s) 2905
AspS9I GGNCC 8 cut(s) 87, 245, 555, 580, 1462, 2642, 2770, 2797
AsuHPI GGTGA 6 cut(s) 172, 494, 984, 1158, 1304, 1682
AvaII GGWCC 4 cut(s) 87, 555, 2642, 2797
AxyI CCTNAGG 2 cut(s) 812, 2638
BaeGI GKGCMC 1 cut(s) 1113
BalI TGGCCA 2 cut(s) 525, 2377
BamHI GGATCC 1 cut(s) 1433
BanII GRGCYC 3 cut(s) 1369, 1963, 2961
BauI CACGAG 2 cut(s) 1362, 2382
BbsI GAAGAC 1 cut(s) 868
Bbv12I GWGCWC 5 cut(s) 1369, 1624, 1963, 2038, 2781
BbvI GCAGC 6 cut(s) 397, 871, 1507, 1804, 2698, 2767
BccI CCATC 7 cut(s) 566, 710, 1213, 1453, 1541, 2386, 2570
BceAI ACGGC 3 cut(s) 1992, 2195, 2757
BcgI CGANNNNNNTGC 2 cut(s) 2846, 2880
BciT130I CCWGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
BciVI GTATCC 1 cut(s) 1167
BcoDI GTCTC 3 cut(s) 818, 1866, 2456
BcuI ACTAGT 2 cut(s) 476, 2318
BfaI CTAG 7 cut(s) 62, 317, 477, 930, 2319, 2355, 2993
BfmI CTRYAG 3 cut(s) 2091, 2712, 2838
BfrI CTTAAG 1 cut(s) 1130
BfuAI ACCTGC 1 cut(s) 1525
BfuI GTATCC 1 cut(s) 1167
BglI GCCNNNNNGGC 1 cut(s) 1789
BglII AGATCT 1 cut(s) 1609
BisI GCNGC 6 cut(s) 386, 885, 1521, 1793, 2712, 2756
BlsI GCNGC 6 cut(s) 387, 886, 1522, 1794, 2713, 2757
Bme1390I CCNGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
Bme18I GGWCC 4 cut(s) 87, 555, 2642, 2797
BmgBI CACGTC 2 cut(s) 290, 1876
BmgT120I GGNCC 8 cut(s) 87, 245, 555, 580, 1462, 2642, 2770, 2797
BmiI GGNNCC 5 cut(s) 88, 89, 1435, 2644, 2960
BmrFI CCNGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
BmrI ACTGGG 1 cut(s) 2493
BmuI ACTGGG 1 cut(s) 2493
BpiI GAAGAC 1 cut(s) 868
BpmI CTGGAG 3 cut(s) 205, 2490, 2758
Bpu10I CCTNAGC 1 cut(s) 1069
BpuEI CTTGAG 6 cut(s) 134, 749, 1489, 1545, 2768, 2984
Bsa29I ATCGAT 2 cut(s) 1767, 2583
BsaAI YACGTR 1 cut(s) 2159
BsaBI GATNNNNATC 2 cut(s) 1017, 1389
BsaI GGTCTC 1 cut(s) 2456
BsaJI CCNNGG 5 cut(s) 551, 1033, 1169, 2655, 2767
BsaXI ACNNNNNCTCC 8 cut(s) 327, 357, 773, 803, 2667, 2697, 2731, 2761
Bsc4I CCNNNNNNNGG 5 cut(s) 1308, 1447, 2384, 2558, 2656
Bse1I ACTGG 8 cut(s) 374, 420, 457, 1714, 1850, 2488, 2506, 2741
Bse21I CCTNAGG 2 cut(s) 812, 2638
Bse3DI GCAATG 1 cut(s) 2196
Bse8I GATNNNNATC 2 cut(s) 1017, 1389
BseBI CCWGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
BseCI ATCGAT 2 cut(s) 1767, 2583
BseDI CCNNGG 5 cut(s) 551, 1033, 1169, 2655, 2767
BseGI GGATG 3 cut(s) 721, 729, 2713
BseJI GATNNNNATC 2 cut(s) 1017, 1389
BseLI CCNNNNNNNGG 5 cut(s) 1308, 1447, 2384, 2558, 2656
BseMI GCAATG 1 cut(s) 2196
BseMII CTCAG 9 cut(s) 125, 504, 729, 826, 1083, 1175, 1851, 2652, 2892
BseNI ACTGG 8 cut(s) 374, 420, 457, 1714, 1850, 2488, 2506, 2741
BseRI GAGGAG 2 cut(s) 2328, 2771
BseSI GKGCMC 1 cut(s) 1113
BseXI GCAGC 6 cut(s) 397, 871, 1507, 1804, 2698, 2767
BseYI CCCAGC 1 cut(s) 1666
BshVI ATCGAT 2 cut(s) 1767, 2583
BsiHKAI GWGCWC 5 cut(s) 1369, 1624, 1963, 2038, 2781
BsiSI CCGG 2 cut(s) 1566, 2563
BsiWI CGTACG 1 cut(s) 1866
BslFI GGGAC 2 cut(s) 73, 1156
BslI CCNNNNNNNGG 5 cut(s) 1308, 1447, 2384, 2558, 2656
BsmAI GTCTC 3 cut(s) 818, 1866, 2456
BsmBI CGTCTC 1 cut(s) 1866
BsmFI GGGAC 2 cut(s) 73, 1156
Bso31I GGTCTC 1 cut(s) 2456
Bsp1286I GDGCHC 7 cut(s) 1113, 1369, 1624, 1963, 2038, 2781, 2961
Bsp143I GATC 9 cut(s) 426, 1402, 1433, 1554, 1609, 2365, 2548, 2608, 3044
Bsp19I CCATGG 2 cut(s) 551, 1033
BspACI CCGC 5 cut(s) 757, 2201, 2416, 2614, 3029
BspCNI CTCAG 9 cut(s) 126, 505, 730, 825, 1082, 1174, 1850, 2651, 2891
BspDI ATCGAT 2 cut(s) 1767, 2583
BspHI TCATGA 1 cut(s) 1539
BspLI GGNNCC 5 cut(s) 88, 89, 1435, 2644, 2960
BspMAI CTGCAG 1 cut(s) 2716
BspMI ACCTGC 1 cut(s) 1525
BspPI GGATC 5 cut(s) 1397, 1428, 1441, 1562, 2543
BspTI CTTAAG 1 cut(s) 1130
BspTNI GGTCTC 1 cut(s) 2456
BsrDI GCAATG 1 cut(s) 2196
BsrI ACTGG 8 cut(s) 374, 420, 457, 1714, 1850, 2488, 2506, 2741
BssECI CCNNGG 5 cut(s) 551, 1033, 1169, 2655, 2767
BssMI GATC 9 cut(s) 426, 1402, 1433, 1554, 1609, 2365, 2548, 2608, 3044
BssNAI GTATAC 1 cut(s) 2324
BssSI CACGAG 2 cut(s) 1362, 2382
BssT1I CCWWGG 3 cut(s) 551, 1033, 2655
Bst1107I GTATAC 1 cut(s) 2324
Bst2BI CACGAG 2 cut(s) 1362, 2382
Bst2UI CCWGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
Bst4CI ACNGT 9 cut(s) 505, 640, 1063, 1170, 1483, 1888, 2885, 2890, 2930
Bst6I CTCTTC 3 cut(s) 1803, 2009, 2596
BstAFI CTTAAG 1 cut(s) 1130
BstAPI GCANNNNNTGC 1 cut(s) 2611
BstBAI YACGTR 1 cut(s) 2159
BstC8I GCNNGC 2 cut(s) 542, 2560
BstDSI CCRYGG 3 cut(s) 551, 1033, 1169
BstEII GGTNACC 1 cut(s) 1292
BstENI CCTNNNNNAGG 1 cut(s) 1445
BstF5I GGATG 3 cut(s) 721, 729, 2713
BstHHI GCGC 1 cut(s) 2905
BstKTI GATC 9 cut(s) 429, 1405, 1436, 1557, 1612, 2368, 2551, 2611, 3047
BstMAI GTCTC 3 cut(s) 818, 1866, 2456
BstMBI GATC 9 cut(s) 426, 1402, 1433, 1554, 1609, 2365, 2548, 2608, 3044
BstMWI GCNNNNNNNGC 7 cut(s) 212, 453, 1421, 1789, 2141, 2207, 2611
BstNI CCWGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
BstNSI RCATGY 4 cut(s) 544, 757, 1257, 2460
BstPI GGTNACC 1 cut(s) 1292
BstSCI CCNGG 7 cut(s) 55, 182, 1272, 2372, 2467, 2766, 2799
BstSFI CTRYAG 3 cut(s) 2091, 2712, 2838
BstSLI GKGCMC 1 cut(s) 1113
BstSNI TACGTA 1 cut(s) 2159
BstV1I GCAGC 6 cut(s) 397, 871, 1507, 1804, 2698, 2767
BstV2I GAAGAC 1 cut(s) 868
BstX2I RGATCY 2 cut(s) 1433, 1609
BstXI CCANNNNNNTGG 1 cut(s) 479
BstYI RGATCY 2 cut(s) 1433, 1609
BstZ17I GTATAC 1 cut(s) 2324
Bsu15I ATCGAT 2 cut(s) 1767, 2583
Bsu36I CCTNAGG 2 cut(s) 812, 2638
BsuI GTATCC 1 cut(s) 1167
BsuTUI ATCGAT 2 cut(s) 1767, 2583
BtgI CCRYGG 3 cut(s) 551, 1033, 1169
BtrI CACGTC 2 cut(s) 290, 1876
BtsCI GGATG 3 cut(s) 721, 729, 2713
BtsI GCAGTG 3 cut(s) 215, 473, 2512
BtsIMutI CAGTG 7 cut(s) 215, 367, 473, 1845, 2298, 2512, 2935
BveI ACCTGC 1 cut(s) 1525
Cac8I GCNNGC 2 cut(s) 542, 2560
CaiI CAGNNNCTG 2 cut(s) 369, 1598
CciI TCATGA 1 cut(s) 1539
CfoI GCGC 1 cut(s) 2905
Cfr13I GGNCC 8 cut(s) 87, 245, 555, 580, 1462, 2642, 2770, 2797
ClaI ATCGAT 2 cut(s) 1767, 2583
CspCI CAANNNNNGTGG 2 cut(s) 1312, 1347
DpnI GATC 9 cut(s) 428, 1404, 1435, 1556, 1611, 2367, 2550, 2610, 3046
DpnII GATC 9 cut(s) 426, 1402, 1433, 1554, 1609, 2365, 2548, 2608, 3044
DraI TTTAAA 1 cut(s) 1606
DraIII CACNNNGTG 1 cut(s) 537
DrdI GACNNNNNNGTC 1 cut(s) 2888
DseDI GACNNNNNNGTC 1 cut(s) 2888
EaeI YGGCCR 4 cut(s) 523, 858, 2375, 2560
Eam1104I CTCTTC 3 cut(s) 1803, 2009, 2596
EarI CTCTTC 3 cut(s) 1803, 2009, 2596
Ecl136II GAGCTC 2 cut(s) 1367, 1961
Eco105I TACGTA 1 cut(s) 2159
Eco130I CCWWGG 3 cut(s) 551, 1033, 2655
Eco147I AGGCCT 1 cut(s) 1151
Eco24I GRGCYC 3 cut(s) 1369, 1963, 2961
Eco31I GGTCTC 1 cut(s) 2456
Eco32I GATATC 3 cut(s) 1119, 1387, 2587
Eco47I GGWCC 4 cut(s) 87, 555, 2642, 2797
Eco53kI GAGCTC 2 cut(s) 1367, 1961
Eco57I CTGAAG 1 cut(s) 361
Eco81I CCTNAGG 2 cut(s) 812, 2638
Eco91I GGTNACC 1 cut(s) 1292
EcoICRI GAGCTC 2 cut(s) 1367, 1961
EcoNI CCTNNNNNAGG 1 cut(s) 1445
EcoO109I RGGNCCY 3 cut(s) 87, 2642, 2797
EcoO65I GGTNACC 1 cut(s) 1292
EcoRI GAATTC 2 cut(s) 2181, 3049
EcoRII CCWGG 7 cut(s) 55, 182, 1272, 2372, 2467, 2766, 2799
EcoRV GATATC 3 cut(s) 1119, 1387, 2587
EcoT14I CCWWGG 3 cut(s) 551, 1033, 2655
EcoT22I ATGCAT 3 cut(s) 546, 2107, 2403
EcoT38I GRGCYC 3 cut(s) 1369, 1963, 2961
ErhI CCWWGG 3 cut(s) 551, 1033, 2655
Esp3I CGTCTC 1 cut(s) 1866
FalI AAGNNNNNCTT 4 cut(s) 1067, 1099, 1779, 1811
FaqI GGGAC 2 cut(s) 73, 1156
FauI CCCGC 1 cut(s) 2194
FauNDI CATATG 1 cut(s) 2218
FblI GTMKAC 4 cut(s) 1079, 1737, 2323, 2359
Fnu4HI GCNGC 6 cut(s) 386, 885, 1521, 1793, 2712, 2756
FokI GGATG 3 cut(s) 728, 736, 2720
FriOI GRGCYC 3 cut(s) 1369, 1963, 2961
Fsp4HI GCNGC 6 cut(s) 386, 885, 1521, 1793, 2712, 2756
FspBI CTAG 7 cut(s) 62, 317, 477, 930, 2319, 2355, 2993
FspI TGCGCA 1 cut(s) 2904
GlaI GCGC 1 cut(s) 2904
GluI GCNGC 6 cut(s) 386, 885, 1521, 1793, 2712, 2756
GsaI CCCAGC 1 cut(s) 1670
GsuI CTGGAG 3 cut(s) 205, 2490, 2758
HapII CCGG 2 cut(s) 1566, 2563
HhaI GCGC 1 cut(s) 2905
Hin6I GCGC 1 cut(s) 2903
HinP1I GCGC 1 cut(s) 2903
HincII GTYRAC 2 cut(s) 1080, 2517
HindII GTYRAC 2 cut(s) 1080, 2517
HindIII AAGCTT 3 cut(s) 110, 767, 1632
HpaII CCGG 2 cut(s) 1566, 2563
HphI GGTGA 6 cut(s) 172, 494, 984, 1158, 1304, 1682
Hpy166II GTNNAC 8 cut(s) 1080, 1738, 1843, 1949, 2324, 2360, 2517, 3036
Hpy8I GTNNAC 8 cut(s) 1080, 1738, 1843, 1949, 2324, 2360, 2517, 3036
Hpy99I CGWCG 2 cut(s) 245, 291
HpyCH4III ACNGT 9 cut(s) 505, 640, 1063, 1170, 1483, 1888, 2885, 2890, 2930
HpyCH4IV ACGT 4 cut(s) 240, 289, 1875, 2158
HpyF10VI GCNNNNNNNGC 7 cut(s) 212, 453, 1421, 1789, 2141, 2207, 2611
HpySE526I ACGT 4 cut(s) 240, 289, 1875, 2158
HspAI GCGC 1 cut(s) 2903
KflI GGGWCCC 1 cut(s) 87
Kzo9I GATC 9 cut(s) 426, 1402, 1433, 1554, 1609, 2365, 2548, 2608, 3044
LmnI GCTCC 6 cut(s) 335, 1619, 2041, 2428, 2784, 2964
Lsp1109I GCAGC 6 cut(s) 397, 871, 1507, 1804, 2698, 2767
MaeI CTAG 7 cut(s) 62, 317, 477, 930, 2319, 2355, 2993
MaeII ACGT 4 cut(s) 240, 289, 1875, 2158
MalI GATC 9 cut(s) 428, 1404, 1435, 1556, 1611, 2367, 2550, 2610, 3046
MboI GATC 9 cut(s) 426, 1402, 1433, 1554, 1609, 2365, 2548, 2608, 3044
MfeI CAATTG 2 cut(s) 618, 951
MflI RGATCY 2 cut(s) 1433, 1609
MhlI GDGCHC 7 cut(s) 1113, 1369, 1624, 1963, 2038, 2781, 2961
MlsI TGGCCA 2 cut(s) 525, 2377
MluNI TGGCCA 2 cut(s) 525, 2377
MlyI GAGTC 3 cut(s) 13, 125, 716
MmeI TCCRAC 1 cut(s) 1912
Mox20I TGGCCA 2 cut(s) 525, 2377
Mph1103I ATGCAT 3 cut(s) 546, 2107, 2403
MroXI GAANNNNTTC 2 cut(s) 51, 2914
MscI TGGCCA 2 cut(s) 525, 2377
MseI TTAA 9 cut(s) 11, 38, 170, 746, 1131, 1328, 1587, 1605, 2078
MslI CAYNNNNRTG 2 cut(s) 266, 477
Msp20I TGGCCA 2 cut(s) 525, 2377
MspCI CTTAAG 1 cut(s) 1130
MspI CCGG 2 cut(s) 1566, 2563
MspR9I CCNGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
MunI CAATTG 2 cut(s) 618, 951
MvaI CCWGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
MwoI GCNNNNNNNGC 7 cut(s) 212, 453, 1421, 1789, 2141, 2207, 2611
NcoI CCATGG 2 cut(s) 551, 1033
NdeI CATATG 1 cut(s) 2218
NdeII GATC 9 cut(s) 426, 1402, 1433, 1554, 1609, 2365, 2548, 2608, 3044
NlaIV GGNNCC 5 cut(s) 88, 89, 1435, 2644, 2960
NmuCI GTSAC 6 cut(s) 359, 1164, 1292, 1492, 2212, 2930
NsbI TGCGCA 1 cut(s) 2904
NsiI ATGCAT 3 cut(s) 546, 2107, 2403
NspI RCATGY 4 cut(s) 544, 757, 1257, 2460
OliI CACNNNNGTG 2 cut(s) 266, 477
PaeI GCATGC 1 cut(s) 544
PagI TCATGA 1 cut(s) 1539
PceI AGGCCT 1 cut(s) 1151
PciI ACATGT 1 cut(s) 2456
PdmI GAANNNNTTC 2 cut(s) 51, 2914
Pfl23II CGTACG 1 cut(s) 1866
PflFI GACNNNGTC 1 cut(s) 2174
PflMI CCANNNNNTGG 1 cut(s) 2656
PfoI TCCNGGA 2 cut(s) 55, 2467
PkrI GCNGC 6 cut(s) 387, 886, 1522, 1794, 2713, 2757
PleI GAGTC 3 cut(s) 12, 124, 715
PpsI GAGTC 3 cut(s) 12, 124, 715
Ppu21I YACGTR 1 cut(s) 2159
PpuMI RGGWCCY 3 cut(s) 87, 2642, 2797
PscI ACATGT 1 cut(s) 2456
PshBI ATTAAT 2 cut(s) 170, 1587
PsiI TTATAA 1 cut(s) 1907
Psp124BI GAGCTC 2 cut(s) 1369, 1963
Psp5II RGGWCCY 3 cut(s) 87, 2642, 2797
Psp6I CCWGG 7 cut(s) 55, 182, 1272, 2372, 2467, 2766, 2799
PspEI GGTNACC 1 cut(s) 1292
PspFI CCCAGC 1 cut(s) 1666
PspGI CCWGG 7 cut(s) 55, 182, 1272, 2372, 2467, 2766, 2799
PspLI CGTACG 1 cut(s) 1866
PspN4I GGNNCC 5 cut(s) 88, 89, 1435, 2644, 2960
PspPI GGNCC 8 cut(s) 87, 245, 555, 580, 1462, 2642, 2770, 2797
PspPPI RGGWCCY 3 cut(s) 87, 2642, 2797
PstI CTGCAG 1 cut(s) 2716
PstNI CAGNNNCTG 2 cut(s) 369, 1598
PsuI RGATCY 2 cut(s) 1433, 1609
PsyI GACNNNGTC 1 cut(s) 2174
RseI CAYNNNNRTG 2 cut(s) 266, 477
SacI GAGCTC 2 cut(s) 1369, 1963
SalI GTCGAC 1 cut(s) 1078
SaqAI TTAA 9 cut(s) 11, 38, 170, 746, 1131, 1328, 1587, 1605, 2078
SatI GCNGC 6 cut(s) 386, 885, 1521, 1793, 2712, 2756
Sau3AI GATC 9 cut(s) 426, 1402, 1433, 1554, 1609, 2365, 2548, 2608, 3044
Sau96I GGNCC 8 cut(s) 87, 245, 555, 580, 1462, 2642, 2770, 2797
SchI GAGTC 3 cut(s) 13, 125, 716
ScrFI CCNGG 7 cut(s) 57, 184, 1274, 2374, 2469, 2768, 2801
SduI GDGCHC 7 cut(s) 1113, 1369, 1624, 1963, 2038, 2781, 2961
SfcI CTRYAG 3 cut(s) 2091, 2712, 2838
SinI GGWCC 4 cut(s) 87, 555, 2642, 2797
SmiMI CAYNNNNRTG 2 cut(s) 266, 477
SmlI CTYRAG 7 cut(s) 113, 764, 1130, 1468, 1560, 2783, 2963
SmoI CTYRAG 7 cut(s) 113, 764, 1130, 1468, 1560, 2783, 2963
SnaBI TACGTA 1 cut(s) 2159
SpeI ACTAGT 2 cut(s) 476, 2318
SphI GCATGC 1 cut(s) 544
SseBI AGGCCT 1 cut(s) 1151
SsiI CCGC 5 cut(s) 757, 2201, 2416, 2614, 3029
SspMI CTAG 7 cut(s) 62, 317, 477, 930, 2319, 2355, 2993
SstI GAGCTC 2 cut(s) 1369, 1963
StuI AGGCCT 1 cut(s) 1151
StyD4I CCNGG 7 cut(s) 55, 182, 1272, 2372, 2467, 2766, 2799
StyI CCWWGG 3 cut(s) 551, 1033, 2655
TaaI ACNGT 9 cut(s) 505, 640, 1063, 1170, 1483, 1888, 2885, 2890, 2930
TaiI ACGT 4 cut(s) 243, 292, 1878, 2161
TaqI TCGA 7 cut(s) 258, 1079, 1706, 1767, 2052, 2583, 3047
TatI WGTACW 4 cut(s) 412, 1842, 1948, 3033
Tru1I TTAA 9 cut(s) 11, 38, 170, 746, 1131, 1328, 1587, 1605, 2078
Tru9I TTAA 9 cut(s) 11, 38, 170, 746, 1131, 1328, 1587, 1605, 2078
TscAI CASTG 7 cut(s) 222, 374, 473, 1845, 2298, 2512, 2935
TseFI GTSAC 6 cut(s) 359, 1164, 1292, 1492, 2212, 2930
TseI GCWGC 6 cut(s) 385, 884, 1520, 1792, 2711, 2755
Tsp45I GTSAC 6 cut(s) 359, 1164, 1292, 1492, 2212, 2930
TspDTI ATGAA 8 cut(s) 561, 740, 800, 1556, 1644, 2492, 2694, 2826
TspGWI ACGGA 2 cut(s) 1884, 2021
TspRI CASTG 7 cut(s) 222, 374, 473, 1845, 2298, 2512, 2935
Tth111I GACNNNGTC 1 cut(s) 2174
Van91I CCANNNNNTGG 1 cut(s) 2656
Vha464I CTTAAG 1 cut(s) 1130
VpaK11BI GGWCC 4 cut(s) 87, 555, 2642, 2797
VspI ATTAAT 2 cut(s) 170, 1587
XagI CCTNNNNNAGG 1 cut(s) 1445
XapI RAATTY 4 cut(s) 970, 1278, 2181, 3049
XceI RCATGY 4 cut(s) 544, 757, 1257, 2460
XcmI CCANNNNNNNNNTGG 3 cut(s) 154, 2370, 2653
XmiI GTMKAC 4 cut(s) 1079, 1737, 2323, 2359
XmnI GAANNNNTTC 2 cut(s) 51, 2914
XspI CTAG 7 cut(s) 62, 317, 477, 930, 2319, 2355, 2993
Zsp2I ATGCAT 3 cut(s) 546, 2107, 2403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.