Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000680

Physical Location & Seq

Genomic Coordinates Forward (+)

44169740 .. 44173650

Gene Structure 3911 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G028990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGAGGGTTGCTGTTTGTGGTACTGTTGGCTCAGGCAAGTCAACCTTACTTTCTTGTATTCTGGGAGAAGTGCCCAAGATATCTGGTCTTCTTAAGTTGTGTGGGACAAAGGCCTATGTTTCTCAGTCACCATGGATACAGAGTGGCAAGATAGAAGAAAACATATTGTTTGGTAAAGTGATGGACAGAGAAAGGTATGAGGGGGTTCTCGAAGCATGTTCGTTGAAGAAGGACCTGGAAATTCTACCATTTGGTGACCAGACCATTATAGGGGAGAGGGGAATCAATTTAAGTGGAGGGCAGAAGCAAAGAATACAAATTGCGCGAGCTCTGTACCAAGATGCTGATATCTATCTGTTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGATCCCACCTTTTCAAGGAATGTTTGATGGCCCTCTTGAGTTCCAAAACAGTAATCTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGATATTATCTTGGTCATGAACGATGGAAGGATCACCCAAGCTGGAAAGTTCAATGACATTATCAATTCAGGAACTGATTTTAAAGATCTTGTGGGAGCACACAATGAAGCTTTGTCTGCGCTTGATGCTGTTGGGGTAGGGCCAGGTGAAAAAACAAGCATCAGCGAGGAGGATAACAATTCGACTAGTACTAATGGGGCTGTCAAAGAAGTAGACAACAACGATGTTGAGGATTGTAAAATAGATGATTTAGGTGTGCCAAAAGGGCAGCTTGTTCAAGAAGAAGAGAGAGAGAAAGGTAAGGTTGGGTTCTCAGTGTACTGGAAATACATTACCACAGCGTACAGAGGTGCTTTTGTGCCTTTTATATTGCTTGCACATACTCTTTTTCAACTCCTTCAAATTGGAAGCAATTACTGGATGGCTTGGGCGGCTCCTGTGTCAGCAGACGTGAAACCTCCTGTTACAAGCTCTATGCTTATAATTGTCTATGTGGCTTTGGCTGTTGGAAGTTCTTTTTGTGTCCTGCTCAGAACTCTGCTTCTTGTAACGGCAGGGTACAAGACAGCCACTATACTCTTCCATAAAATGCACTTGTGCATTTTCCGTGCTCCCATGTCATTCTTTGATGCCACTCCAAGTGGAAGAATCTTAAACAGAGCTTCTACAGACCAAAATGCATTGGATATGAACATATCAAATCAAGTTGCCTCCTTTGCCTACTCAATGATATGGCTTTTAGGATATATTGTAGTGATGTCTCAGGTGGCATGGCAGGTTTCCATCATATTTATACCTGTGATTACAGCCTGTGTTTGGTATCAGCAATATTATCTACCTTCAGCACGAGAACTATCAAGATTGGTTGGAGTATGCAAAGCTCCTGTGATACAACATTTTGCTGAAACAATTTCTGGATCAACTACTATTAGGAGCTTTGACCAAGGATCTAGATTCCGAGATATCAACATGGAACTGATAGATGGATATAGTCGGCCAACGTTCTACACCGTTTGTGCAATGCAATGGCTAAGCTTTCGTTTGGATATTTTGTCATCCATTACATTTGCATTGTTTTTAGTTTTCTTGATCTCTGTTCCAGAAGGAATGATAGATCCAGGCATTGCGGGTTTAGCCGTCACATATGGAATTACCTTAAATGGTTTACAAACTGCACTTATATGGAATCTTTGCATTATGGAGAACAAGATAATATCAGTGGAGAGAATACTACAATATACTACTAGTATACCAAGTGAGCCTCCTCTGGTAATAGAATCTAATAGACCAGATCATTCCTGGCCATCACGAGGAAAAGTTGATATGCATGATCTTCAGGTGCGGTATGCTCCACACTTGCCACTTGTGTTGCGGGGTCTCACATGTACCTTTCCTGGAGGAATTAAAACTGGGATTGTGGGGAGAACTGGCAGTGGAAAGTCAACTCTTATACAAACTCTTTTCCGAATCGTTGATCCTGATGTTGGCCGGATTTTGATAGATGGCGTCGATATCTCTTCTATTGGATTGCATGATCTGCGGTCTAATCTAAGCATTATCCCTCAGGACCCAACCATGTTTGAGGGAACTGTAAGAAGCAATCTAGACCCACTTGAAGAGTACAAAGATGAACAAATTTGGGAGGCCTTGGATAAGTGCCAACTTGGAGATGAAGTTAGGAAGAAAGAAGGGAAGCTGGATTCTGCAGTTAGTGAAAATGGAGAGAACTGGAGTATGGGTCAGAGGCAGCTCGTTTGCCTGGGCCGTGTGCTCCTCAAGAAAAGTAAGGTCCTGGTGCTTGATGAAGCTACTTCATCTGTTGATACTGCTACAGATAATCTGATTCAGCAGACCCTTCGGCATCACTTCTCAGACTGTACCGTCATTACTATTGCGCACCGAATATCTTCTGTTCTTGACAGTGACATGGTTCTTCTTCTAAGTAATGGGCTCCTTGAGGAATGTGATTCTCCTGCAAGATTGCTAGAAAACAAGTTATCAGCTTTTGCCCAACTTGTAGAGGAGTACACAACGAGATCGAATTCCACTCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0010290 GO:0015399 GO:0015405 GO:0015431 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042623 GO:0042626 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0055085 GO:0071997 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

846

Amino Acids

93.31

Weight (kDa)

5.37

Isoelectric Point (pI)

35.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	2 - 124	3.4e-16	ABC transporter
ABC_membrane	PF00664	286 - 526	1.4e-27	ABC transporter transmembrane region
ABC_tran	PF00005	619 - 767	8.5e-28	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71330 AT3G13080 AT3G13080 AT3G13080 AT3G13080 AT3G13080 AT3G13090 AT3G13100 AT3G13100
fragaria_vesca	FvH4_3g25430 FvH4_3g25430 FvH4_4g10780
malus_domestica	MD03G1188200.v1.1 MD11G1203300.v1.1 MD11G1203400.v1.1 MD11G1203500.v1.1 MD11G1203600.v1.1
prunus_persica	Prupe.4G235100_v2.0.a1 Prupe.4G235200_v2.0.a1 Prupe.4G235300_v2.0.a1 Prupe.I000500_v2.0.a1 Prupe.I000600_v2.0.a1 Prupe.I000700_v2.0.a1
pyrus_communis	pycom03g14070 pycom03g14080 pycom11g17640 pycom11g17650
rosa_chinensis	RchiOBHm_Chr4g0406401 RchiOBHm_Chr4g0406811 RchiOBHm_Chr5g0037441 RchiOBHm_Chr5g0037451 RchiOBHm_Chr5g0037461 RchiOBHm_Chr5g0046661 RchiOBHm_Chr5g0046671 RchiOBHm_Chr5g0046681
rosa_laevigata	RLG00000008754 RLG00000008756 RLG00000033782 RLG00000034430 RLG00000034431
rosa_multiflora	Rmu_co8175670.1_g000001 Rmu_sc0000292.1_g000013 Rmu_sc0000292.1_g000018 Rmu_sc0002271.1_g000015 Rmu_sc0002521.1_g000018 Rmu_sc0006408.1_g000011 Rmu_sc0008087.1_g000002
rosa_roxburghii	Rroxscaffold_1G00023630 Rroxscaffold_1G00034680 Rroxscaffold_1G00034700 Rroxscaffold_5G00351590 Rroxscaffold_6G00394770
rosa_rugosa	Rorug04G0074200 Rorug04G0074200 Rorug04G0084900 Rorug04G0084900 Rorug05G0230800 Rorug05G0230800
rosa_samantha	Rh1AG181100 Rh4AG141000 Rh4BG137500 Rh4BG146500 Rh5CG289500 Rh5CG289600 Rh5CG344900 Rh5CG345000 Rh7AG392100
rosa_wichuraiana	Rw0G000830 Rw1G003740 Rw4G011460 Rw4G011480 Rw5G023560 Rw5G023570 Rw5G028980 Rw5G028990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	968
AasI	GACNNNNNNGTC	1 cut(s)	2366
Acc16I	TGCGCA	1 cut(s)	2382
Acc36I	ACCTGC	2 cut(s)	487, 1252
AccI	GTMKAC	2 cut(s)	699, 1735
AccII	CGCG	1 cut(s)	325
AciI	CCGC	5 cut(s)	917, 1613, 1828, 1858, 2026
AclI	AACGTT	1 cut(s)	1487
AclWI	GGATC	8 cut(s)	359, 390, 403, 524, 1411, 1441, 1595, 1955
AcoI	YGGCCR	3 cut(s)	1481, 1787, 1972
AcsI	RAATTY	3 cut(s)	240, 2121, 2527
AcuI	CTGAAG	2 cut(s)	1311, 1805
AcyI	GRCGYC	1 cut(s)	1992
AfiI	CCNNNNNNNGG	5 cut(s)	270, 409, 1302, 1796, 1970
AflII	CTTAAG	1 cut(s)	92
AflIII	ACRYGT	1 cut(s)	1868
AgsI	TTSAA	7 cut(s)	226, 409, 538, 764, 878, 887, 2102
AhlI	ACTAGT	2 cut(s)	671, 1730
AjiI	CACGTC	1 cut(s)	937
AjnI	CCWGG	7 cut(s)	234, 628, 1603, 1784, 1879, 2244, 2277
Alw21I	GWGCWC	4 cut(s)	331, 586, 1099, 2259
Alw26I	GTCTC	2 cut(s)	1251, 1868
AlwI	GGATC	8 cut(s)	359, 390, 403, 524, 1411, 1441, 1595, 1955
AlwNI	CAGNNNCTG	1 cut(s)	560
AoxI	GGCC	8 cut(s)	111, 423, 626, 1481, 1787, 1972, 2130, 2248
ApeKI	GCWGC	3 cut(s)	482, 754, 2233
ApoI	RAATTY	3 cut(s)	240, 2121, 2527
Asp700I	GAANNNNTTC	1 cut(s)	2392
AspLEI	GCGC	3 cut(s)	325, 607, 2383
AspS9I	GGNCC	6 cut(s)	232, 424, 626, 2053, 2248, 2275
AsuHPI	GGTGA	4 cut(s)	120, 266, 511, 644
AvaII	GGWCC	3 cut(s)	232, 2053, 2275
AxyI	CCTNAGG	1 cut(s)	2049
BaeGI	GKGCMC	1 cut(s)	75
BalI	TGGCCA	1 cut(s)	1789
BamHI	GGATCC	1 cut(s)	395
BanII	GRGCYC	2 cut(s)	331, 2439
BauI	CACGAG	2 cut(s)	1332, 1794
BbsI	GAAGAC	1 cut(s)	80
Bbv12I	GWGCWC	4 cut(s)	331, 586, 1099, 2259
BbvI	GCAGC	3 cut(s)	469, 766, 2245
BccI	CCATC	8 cut(s)	175, 415, 503, 901, 1277, 1463, 1798, 1982
BceAI	ACGGC	3 cut(s)	1053, 1607, 2235
BcgI	CGANNNNNNTGC	2 cut(s)	2324, 2358
BciT130I	CCWGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
BciVI	GTATCC	1 cut(s)	129
BcoDI	GTCTC	2 cut(s)	1251, 1868
BcuI	ACTAGT	2 cut(s)	671, 1730
BfaI	CTAG	5 cut(s)	672, 1437, 1731, 2090, 2471
BfmI	CTRYAG	4 cut(s)	1152, 2190, 2316, 2537
BfrI	CTTAAG	1 cut(s)	92
BfuAI	ACCTGC	2 cut(s)	487, 1252
BfuI	GTATCC	1 cut(s)	129
BglI	GCCNNNNNGGC	1 cut(s)	751
BglII	AGATCT	1 cut(s)	571
BisI	GCNGC	4 cut(s)	483, 755, 918, 2234
BlpI	GCTNAGC	1 cut(s)	1517
BlsI	GCNGC	4 cut(s)	484, 756, 919, 2235
BmcAI	AGTACT	1 cut(s)	676
Bme1390I	CCNGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
Bme18I	GGWCC	3 cut(s)	232, 2053, 2275
BmgBI	CACGTC	1 cut(s)	937
BmgT120I	GGNCC	6 cut(s)	232, 424, 626, 2053, 2248, 2275
BmiI	GGNNCC	4 cut(s)	397, 921, 2055, 2438
BmrFI	CCNGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
BmrI	ACTGGG	1 cut(s)	1905
BmsI	GCATC	6 cut(s)	331, 373, 601, 654, 1105, 2356
BmuI	ACTGGG	1 cut(s)	1905
BpiI	GAAGAC	1 cut(s)	80
BpmI	CTGGAG	2 cut(s)	1902, 2236
Bpu10I	CCTNAGC	1 cut(s)	31
Bpu1102I	GCTNAGC	1 cut(s)	1517
BpuEI	CTTGAG	3 cut(s)	451, 2246, 2462
BsaBI	GATNNNNATC	1 cut(s)	351
BsaHI	GRCGYC	1 cut(s)	1992
BsaI	GGTCTC	1 cut(s)	1868
BsaJI	CCNNGG	4 cut(s)	131, 1429, 2133, 2245
BsaXI	ACNNNNNCTCC	4 cut(s)	2145, 2175, 2209, 2239
Bsc4I	CCNNNNNNNGG	5 cut(s)	270, 409, 1302, 1796, 1970
Bse1I	ACTGG	5 cut(s)	812, 908, 1900, 1918, 2219
Bse21I	CCTNAGG	1 cut(s)	2049
Bse3DI	GCAATG	3 cut(s)	1512, 1517, 1608
Bse8I	GATNNNNATC	1 cut(s)	351
BseBI	CCWGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
BseDI	CCNNGG	4 cut(s)	131, 1429, 2133, 2245
BseGI	GGATG	2 cut(s)	912, 1541
BseJI	GATNNNNATC	1 cut(s)	351
BseLI	CCNNNNNNNGG	5 cut(s)	270, 409, 1302, 1796, 1970
BseMI	GCAATG	3 cut(s)	1512, 1517, 1608
BseMII	CTCAG	7 cut(s)	45, 137, 813, 1030, 1262, 2063, 2370
BseNI	ACTGG	5 cut(s)	812, 908, 1900, 1918, 2219
BseRI	GAGGAG	4 cut(s)	668, 1740, 2249, 2522
BseSI	GKGCMC	1 cut(s)	75
BseXI	GCAGC	3 cut(s)	469, 766, 2245
BsgI	GTGCAG	1 cut(s)	1644
Bsh1236I	CGCG	1 cut(s)	325
BshFI	GGCC	8 cut(s)	113, 425, 628, 1483, 1789, 1974, 2132, 2250
BsiHKAI	GWGCWC	4 cut(s)	331, 586, 1099, 2259
BsiSI	CCGG	1 cut(s)	1975
BslFI	GGGAC	1 cut(s)	118
BslI	CCNNNNNNNGG	5 cut(s)	270, 409, 1302, 1796, 1970
BsmAI	GTCTC	2 cut(s)	1251, 1868
BsmFI	GGGAC	1 cut(s)	118
BsnI	GGCC	8 cut(s)	113, 425, 628, 1483, 1789, 1974, 2132, 2250
Bso31I	GGTCTC	1 cut(s)	1868
Bsp1286I	GDGCHC	6 cut(s)	75, 331, 586, 1099, 2259, 2439
Bsp1720I	GCTNAGC	1 cut(s)	1517
Bsp19I	CCATGG	1 cut(s)	131
BspACI	CCGC	5 cut(s)	917, 1613, 1828, 1858, 2026
BspANI	GGCC	8 cut(s)	113, 425, 628, 1483, 1789, 1974, 2132, 2250
BspCNI	CTCAG	7 cut(s)	44, 136, 812, 1029, 1261, 2062, 2369
BspFNI	CGCG	1 cut(s)	325
BspHI	TCATGA	1 cut(s)	501
BspLI	GGNNCC	4 cut(s)	397, 921, 2055, 2438
BspMAI	CTGCAG	1 cut(s)	2194
BspMI	ACCTGC	2 cut(s)	487, 1252
BspPI	GGATC	8 cut(s)	359, 390, 403, 524, 1411, 1441, 1595, 1955
BspTI	CTTAAG	1 cut(s)	92
BspTNI	GGTCTC	1 cut(s)	1868
BsrDI	GCAATG	3 cut(s)	1512, 1517, 1608
BsrI	ACTGG	5 cut(s)	812, 908, 1900, 1918, 2219
BssECI	CCNNGG	4 cut(s)	131, 1429, 2133, 2245
BssNAI	GTATAC	1 cut(s)	1736
BssNI	GRCGYC	1 cut(s)	1992
BssSI	CACGAG	2 cut(s)	1332, 1794
BssT1I	CCWWGG	3 cut(s)	131, 1429, 2133
Bst1107I	GTATAC	1 cut(s)	1736
Bst2BI	CACGAG	2 cut(s)	1332, 1794
Bst2UI	CCWGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
Bst4CI	ACNGT	7 cut(s)	25, 445, 1498, 2077, 2363, 2368, 2408
Bst6I	CTCTTC	4 cut(s)	765, 1070, 2008, 2097
BstACI	GRCGYC	1 cut(s)	1992
BstAFI	CTTAAG	1 cut(s)	92
BstAPI	GCANNNNNTGC	1 cut(s)	2023
BstC8I	GCNNGC	2 cut(s)	327, 861
BstDSI	CCRYGG	1 cut(s)	131
BstEII	GGTNACC	1 cut(s)	254
BstENI	CCTNNNNNAGG	1 cut(s)	407
BstF5I	GGATG	2 cut(s)	912, 1541
BstFNI	CGCG	1 cut(s)	325
BstHHI	GCGC	3 cut(s)	325, 607, 2383
BstMAI	GTCTC	2 cut(s)	1251, 1868
BstMWI	GCNNNNNNNGC	8 cut(s)	383, 602, 611, 751, 917, 1202, 1619, 2023
BstNI	CCWGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
BstNSI	RCATGY	2 cut(s)	219, 1872
BstPI	GGTNACC	1 cut(s)	254
BstSCI	CCNGG	7 cut(s)	234, 628, 1603, 1784, 1879, 2244, 2277
BstSFI	CTRYAG	4 cut(s)	1152, 2190, 2316, 2537
BstSLI	GKGCMC	1 cut(s)	75
BstUI	CGCG	1 cut(s)	325
BstV1I	GCAGC	3 cut(s)	469, 766, 2245
BstV2I	GAAGAC	1 cut(s)	80
BstX2I	RGATCY	4 cut(s)	395, 571, 1433, 1600
BstYI	RGATCY	4 cut(s)	395, 571, 1433, 1600
BstZ17I	GTATAC	1 cut(s)	1736
Bsu36I	CCTNAGG	1 cut(s)	2049
BsuI	GTATCC	1 cut(s)	129
BsuRI	GGCC	8 cut(s)	113, 425, 628, 1483, 1789, 1974, 2132, 2250
BtgI	CCRYGG	1 cut(s)	131
BtrI	CACGTC	1 cut(s)	937
BtsCI	GGATG	2 cut(s)	912, 1541
BtsI	GCAGTG	1 cut(s)	1924
BtsIMutI	CAGTG	4 cut(s)	807, 1710, 1924, 2413
BveI	ACCTGC	2 cut(s)	487, 1252
Cac8I	GCNNGC	2 cut(s)	327, 861
CaiI	CAGNNNCTG	1 cut(s)	560
CciI	TCATGA	1 cut(s)	501
CfoI	GCGC	3 cut(s)	325, 607, 2383
Cfr13I	GGNCC	6 cut(s)	232, 424, 626, 2053, 2248, 2275
CseI	GACGC	1 cut(s)	1981
CspCI	CAANNNNNGTGG	4 cut(s)	274, 309, 1836, 1871
DraI	TTTAAA	1 cut(s)	568
DrdI	GACNNNNNNGTC	1 cut(s)	2366
DseDI	GACNNNNNNGTC	1 cut(s)	2366
EaeI	YGGCCR	3 cut(s)	1481, 1787, 1972
Eam1104I	CTCTTC	4 cut(s)	765, 1070, 2008, 2097
EarI	CTCTTC	4 cut(s)	765, 1070, 2008, 2097
Ecl136II	GAGCTC	1 cut(s)	329
Eco130I	CCWWGG	3 cut(s)	131, 1429, 2133
Eco147I	AGGCCT	2 cut(s)	113, 2132
Eco24I	GRGCYC	2 cut(s)	331, 2439
Eco31I	GGTCTC	1 cut(s)	1868
Eco32I	GATATC	4 cut(s)	81, 349, 1450, 1999
Eco47I	GGWCC	3 cut(s)	232, 2053, 2275
Eco53kI	GAGCTC	1 cut(s)	329
Eco57I	CTGAAG	2 cut(s)	1311, 1805
Eco81I	CCTNAGG	1 cut(s)	2049
Eco91I	GGTNACC	1 cut(s)	254
EcoICRI	GAGCTC	1 cut(s)	329
EcoNI	CCTNNNNNAGG	1 cut(s)	407
EcoO109I	RGGNCCY	3 cut(s)	232, 2053, 2275
EcoO65I	GGTNACC	1 cut(s)	254
EcoRI	GAATTC	1 cut(s)	2527
EcoRII	CCWGG	7 cut(s)	234, 628, 1603, 1784, 1879, 2244, 2277
EcoRV	GATATC	4 cut(s)	81, 349, 1450, 1999
EcoT14I	CCWWGG	3 cut(s)	131, 1429, 2133
EcoT22I	ATGCAT	2 cut(s)	1168, 1815
EcoT38I	GRGCYC	2 cut(s)	331, 2439
ErhI	CCWWGG	3 cut(s)	131, 1429, 2133
FalI	AAGNNNNNCTT	4 cut(s)	29, 61, 741, 773
FaqI	GGGAC	1 cut(s)	118
FauI	CCCGC	2 cut(s)	1606, 1851
FauNDI	CATATG	1 cut(s)	1630
FblI	GTMKAC	2 cut(s)	699, 1735
Fnu4HI	GCNGC	4 cut(s)	483, 755, 918, 2234
FokI	GGATG	2 cut(s)	919, 1528
FriOI	GRGCYC	2 cut(s)	331, 2439
Fsp4HI	GCNGC	4 cut(s)	483, 755, 918, 2234
FspBI	CTAG	5 cut(s)	672, 1437, 1731, 2090, 2471
FspI	TGCGCA	1 cut(s)	2382
GlaI	GCGC	3 cut(s)	324, 606, 2382
GluI	GCNGC	4 cut(s)	483, 755, 918, 2234
GsuI	CTGGAG	2 cut(s)	1902, 2236
HaeIII	GGCC	8 cut(s)	113, 425, 628, 1483, 1789, 1974, 2132, 2250
HapII	CCGG	1 cut(s)	1975
HgaI	GACGC	1 cut(s)	1981
HhaI	GCGC	3 cut(s)	325, 607, 2383
Hin1I	GRCGYC	1 cut(s)	1992
Hin6I	GCGC	3 cut(s)	323, 605, 2381
HinP1I	GCGC	3 cut(s)	323, 605, 2381
HincII	GTYRAC	2 cut(s)	42, 1929
HindII	GTYRAC	2 cut(s)	42, 1929
HindIII	AAGCTT	2 cut(s)	594, 1519
HinfI	GANTC	9 cut(s)	282, 1134, 1440, 1672, 1763, 1953, 2186, 2329, 2453
HpaII	CCGG	1 cut(s)	1975
HphI	GGTGA	4 cut(s)	120, 266, 511, 644
Hpy166II	GTNNAC	7 cut(s)	42, 700, 805, 1652, 1736, 1929, 2514
Hpy188I	TCNGA	6 cut(s)	1019, 1445, 1952, 2229, 2328, 2359
Hpy8I	GTNNAC	7 cut(s)	42, 700, 805, 1652, 1736, 1929, 2514
Hpy99I	CGWCG	1 cut(s)	1997
HpyAV	CCTTC	7 cut(s)	223, 507, 893, 1335, 1583, 2168, 2351
HpyCH4III	ACNGT	7 cut(s)	25, 445, 1498, 2077, 2363, 2368, 2408
HpyCH4IV	ACGT	2 cut(s)	936, 1487
HpyF10VI	GCNNNNNNNGC	8 cut(s)	383, 602, 611, 751, 917, 1202, 1619, 2023
HpySE526I	ACGT	2 cut(s)	936, 1487
Hsp92I	GRCGYC	1 cut(s)	1992
HspAI	GCGC	3 cut(s)	323, 605, 2381
LmnI	GCTCC	8 cut(s)	581, 925, 1102, 1372, 1419, 1840, 2262, 2442
Lsp1109I	GCAGC	3 cut(s)	469, 766, 2245
LweI	GCATC	6 cut(s)	331, 373, 601, 654, 1105, 2356
MaeI	CTAG	5 cut(s)	672, 1437, 1731, 2090, 2471
MaeII	ACGT	2 cut(s)	936, 1487
MaeIII	GTNAC	7 cut(s)	126, 254, 454, 949, 1033, 1624, 2408
MflI	RGATCY	4 cut(s)	395, 571, 1433, 1600
MhlI	GDGCHC	6 cut(s)	75, 331, 586, 1099, 2259, 2439
MlsI	TGGCCA	1 cut(s)	1789
MluNI	TGGCCA	1 cut(s)	1789
MmeI	TCCRAC	2 cut(s)	973, 1333
Mox20I	TGGCCA	1 cut(s)	1789
Mph1103I	ATGCAT	2 cut(s)	1168, 1815
MroXI	GAANNNNTTC	1 cut(s)	2392
MscI	TGGCCA	1 cut(s)	1789
MseI	TTAA	6 cut(s)	93, 290, 567, 1139, 1643, 1890
MslI	CAYNNNNRTG	1 cut(s)	1666
Msp20I	TGGCCA	1 cut(s)	1789
MspCI	CTTAAG	1 cut(s)	92
MspI	CCGG	1 cut(s)	1975
MspR9I	CCNGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
MvaI	CCWGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
MvnI	CGCG	1 cut(s)	325
MwoI	GCNNNNNNNGC	8 cut(s)	383, 602, 611, 751, 917, 1202, 1619, 2023
NcoI	CCATGG	1 cut(s)	131
NdeI	CATATG	1 cut(s)	1630
NlaIV	GGNNCC	4 cut(s)	397, 921, 2055, 2438
NmuCI	GTSAC	5 cut(s)	126, 254, 454, 1624, 2408
NsbI	TGCGCA	1 cut(s)	2382
NsiI	ATGCAT	2 cut(s)	1168, 1815
NspI	RCATGY	2 cut(s)	219, 1872
PagI	TCATGA	1 cut(s)	501
PceI	AGGCCT	2 cut(s)	113, 2132
PciI	ACATGT	1 cut(s)	1868
PdmI	GAANNNNTTC	1 cut(s)	2392
PfeI	GAWTC	9 cut(s)	282, 1134, 1440, 1672, 1763, 1953, 2186, 2329, 2453
PfoI	TCCNGGA	1 cut(s)	1879
PkrI	GCNGC	4 cut(s)	484, 756, 919, 2235
PpuMI	RGGWCCY	3 cut(s)	232, 2053, 2275
PscI	ACATGT	1 cut(s)	1868
PsiI	TTATAA	1 cut(s)	968
Psp124BI	GAGCTC	1 cut(s)	331
Psp1406I	AACGTT	1 cut(s)	1487
Psp5II	RGGWCCY	3 cut(s)	232, 2053, 2275
Psp6I	CCWGG	7 cut(s)	234, 628, 1603, 1784, 1879, 2244, 2277
PspEI	GGTNACC	1 cut(s)	254
PspGI	CCWGG	7 cut(s)	234, 628, 1603, 1784, 1879, 2244, 2277
PspN4I	GGNNCC	4 cut(s)	397, 921, 2055, 2438
PspPI	GGNCC	6 cut(s)	232, 424, 626, 2053, 2248, 2275
PspPPI	RGGWCCY	3 cut(s)	232, 2053, 2275
PstI	CTGCAG	1 cut(s)	2194
PstNI	CAGNNNCTG	1 cut(s)	560
PsuI	RGATCY	4 cut(s)	395, 571, 1433, 1600
RseI	CAYNNNNRTG	1 cut(s)	1666
SacI	GAGCTC	1 cut(s)	331
SaqAI	TTAA	6 cut(s)	93, 290, 567, 1139, 1643, 1890
SatI	GCNGC	4 cut(s)	483, 755, 918, 2234
Sau96I	GGNCC	6 cut(s)	232, 424, 626, 2053, 2248, 2275
ScaI	AGTACT	1 cut(s)	676
ScrFI	CCNGG	7 cut(s)	236, 630, 1605, 1786, 1881, 2246, 2279
SduI	GDGCHC	6 cut(s)	75, 331, 586, 1099, 2259, 2439
SfaNI	GCATC	6 cut(s)	331, 373, 601, 654, 1105, 2356
SfcI	CTRYAG	4 cut(s)	1152, 2190, 2316, 2537
SinI	GGWCC	3 cut(s)	232, 2053, 2275
SmiMI	CAYNNNNRTG	1 cut(s)	1666
SmlI	CTYRAG	4 cut(s)	92, 430, 2261, 2441
SmoI	CTYRAG	4 cut(s)	92, 430, 2261, 2441
SpeI	ACTAGT	2 cut(s)	671, 1730
SseBI	AGGCCT	2 cut(s)	113, 2132
SsiI	CCGC	5 cut(s)	917, 1613, 1828, 1858, 2026
SspI	AATATT	1 cut(s)	1316
SspMI	CTAG	5 cut(s)	672, 1437, 1731, 2090, 2471
SstI	GAGCTC	1 cut(s)	331
StuI	AGGCCT	2 cut(s)	113, 2132
StyD4I	CCNGG	7 cut(s)	234, 628, 1603, 1784, 1879, 2244, 2277
StyI	CCWWGG	3 cut(s)	131, 1429, 2133
TaaI	ACNGT	7 cut(s)	25, 445, 1498, 2077, 2363, 2368, 2408
TaiI	ACGT	2 cut(s)	939, 1490
TaqI	TCGA	4 cut(s)	210, 668, 1995, 2525
TatI	WGTACW	4 cut(s)	674, 804, 2106, 2511
TauI	GCSGC	1 cut(s)	920
TfiI	GAWTC	9 cut(s)	282, 1134, 1440, 1672, 1763, 1953, 2186, 2329, 2453
Tru1I	TTAA	6 cut(s)	93, 290, 567, 1139, 1643, 1890
Tru9I	TTAA	6 cut(s)	93, 290, 567, 1139, 1643, 1890
TscAI	CASTG	4 cut(s)	807, 1710, 1924, 2413
TseFI	GTSAC	5 cut(s)	126, 254, 454, 1624, 2408
TseI	GCWGC	3 cut(s)	482, 754, 2233
Tsp45I	GTSAC	5 cut(s)	126, 254, 454, 1624, 2408
TspDTI	ATGAA	7 cut(s)	518, 606, 1190, 2130, 2172, 2289, 2304
TspGWI	ACGGA	1 cut(s)	1082
TspRI	CASTG	4 cut(s)	807, 1710, 1924, 2413
Vha464I	CTTAAG	1 cut(s)	92
VpaK11BI	GGWCC	3 cut(s)	232, 2053, 2275
XagI	CCTNNNNNAGG	1 cut(s)	407
XapI	RAATTY	3 cut(s)	240, 2121, 2527
XbaI	TCTAGA	2 cut(s)	1436, 2089
XceI	RCATGY	2 cut(s)	219, 1872
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1782
XmiI	GTMKAC	2 cut(s)	699, 1735
XmnI	GAANNNNTTC	1 cut(s)	2392
XspI	CTAG	5 cut(s)	672, 1437, 1731, 2090, 2471
ZrmI	AGTACT	1 cut(s)	676
Zsp2I	ATGCAT	2 cut(s)	1168, 1815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.