Prupe.4G235100_v2.0.a1

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
15183012 .. 15189462
6451 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G235100.1

Sequence Viewer

Length: 4524 bp
ATGGAGCTTTTTGATTCTTCAAAGCACGGTGCTCTCTCAGCCTTCTTCTCACACTACTCATCATCATTCATTACGTATCCAGGTACCGATTTTCTTCTCAAACCGGTTTTCATACGTGGGTTTTCTGGCTCATTACACCTAGTTTTGTTATTTGTGTTGCTCGTCTCTTGGGTGTGGAAGAAATTCAAGGTGGGTGATGGAGAAGGTCCAAAACAGAGGTTTGGGAGTGTTCAAAGTTGGTATTATAAGCTAACTTTACTCTGTTGTCTTGGTGTTTCTGGGCTCAGTCTTGTTTTTTGTTTATTGAACTACTTCTATTGGCATAGAAATGATTGGTCTGAGGAAAAGCTAGTGACCCTTTTTGATTTAGCCATTAGAACACTTGCCTGGGGTGCTCTTTGTATCTACTTGCATACCCAGTTCTCTAATTCTTCTGAATCAAAGTTCCCAAATTTATTGAGACTTTGGTGGGGTTCCTACTTTTCTATCTCTTGCTATTCCCTTGTGATAGATATCCTTCTTTACAAGGAACACGTTTCCTTGCCCGTTCAATCTTTAGTTTTTGATGTTGTCTGCGTCATCTCGGGTTTGTTCTTTATATATGTGGGGTTTTTTGGGAAGAAAGAGGGCAGAAATACAGTTCTTGAGGAACCCCTTTTGAATGGTAATGGTAATGGTAATGCAGAGTCAAATAATTCCAAAGGGCGTACACCTGTTACCCCTTATTCAAATGCTGGAATTTTCAGCCTCCTTACTCTTTCTTGGATGGGTCCTCTAATTGCGCTTGGCAATAAGAAGACATTAGACCTTGAGGATGTTCCTGAACTATACAAGGGTGATAGTGTAGTTGGGTCCTTTCCAAATTTTAGAAATAAACTTGAGGCGGAGTGTGGTGCGGATGGCAGGGTTACCACATTTCATCTGGTGAAGGCATTGATATTCTCGGCCTGGAAAGAGGTTGGCTGGACAGGGTTATATGCTATATTTTACACATTGGCATCTTATGTCGGTCCATATCTAATCGACACATTTGTTCAATACCTCTATGGGCGGAGAAAGTTCAAAAATGAAGGCTACGCTTTGGTTTCTGCATTTATGATTGCGAAGCTGGTGGAGTGCCTCAGTCAAAGGCACTGGTTCTTTAAGGCACAACAGGTAGGAGTAAGAATCCGAGCAGTACTTGTTACAGCGATCTATAATAAGGGTTTGACCCTCTCATGCCAGTCCAAGCAGGGCCACACTAGCGGTGAGATTATCAATTTTATGACTGTTGATGCTGAGAGGGTTGGTGACTTCTCTTGGTTCATGCATGATCCATGGATGGTCATTCTACAAGTTGGCTTGGCCCTAGTGATTTTGTACATAAATCTTGGTCTTGCAGCCATTGCAACTTTAGTTGCAACAATAATTGTTATGTTGGCAAATGTTCCTTTGGGGTCCTTGCAGGAGAAGTTTCAGGAAAAGTTAATGGAGTCGAAAGATAAAAGGATGAAGGCAACATCTGAGGTCTTGAGGAACATGAGGATTCTCAAGCTTCAAGCATGGGAGATGAAGTTTTTGTCTAAAATTAATGAGCTCAGGAAGACTGAGGCAGGATGGTTACGAAAGTTTGTTTACACGTCTGCCATGACCTCATTTGTTTTCTGGGGTGCCCCCACATTTGTGTCAGTGGTCACTTTCGTTGCTTGCATGCTTTTGGGGATCCCACTTGAGTCCGGGAAGATCTTATCTGCACTTGCAACATTCAGGATTCTTCAAGAGCCTATCTACAATCTTCCAGACACAATTTCAATGATAGCACAAACTAAGGTATCCCTTGATAGAATTGCATCATTCCTTAGTCTTGATGACTTGCTGCCTGACGTTATAGAGAACCTTCCAAGAGGTAGTTCTGATACAGCAATTGAGATAGTCGATGGGAATTTCTCTTGGGATTTATCATCCCCTAGTCCAACATTGAAGGATCTAAATTTCAAAGTGAGCCAAGGTATGAGGGTTGCTGTTTGTGGTACTGTTGGCTCAGGCAAGTCTAGCTTACTTTCTTGTATTCTGGGAGAAGTTCCGAAGATATCGGGGACTCTTAAAATGTGTGGGACAAAGGCCTATGTTTCTCAGTCACCGTGGATACAGAGTGGCAAGATAGAGGAAAACATATTGTTTGGTCAAGAGATGGACAGAGAAAGATATGAGAGGGTGCTGGACGCATGTTCATTAAAGAAGGACCTGGAAATTCTATCGTTTGGTGATCAGACAATTATAGGGGAGAGGGGAATCAATTTAAGTGGTGGGCAGAAGCAAAGAATACAAATTGCACGTGCTCTGTATCAAGACGCTGATATTTATCTGTTTGATGATCCTTTTAGCGCTGTTGATGCTCATACAGGATCACACCTTTTTAAGGAATGCTTGCTGGGTCTCTTGGGTTCAAAAACAGTAATCTATGTTACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTCATCTTGGTCATGAAAGACGGAAGGATTACTCAAGCAGGAAAGTTCAATGACATTCTTAATTCAGGAACTGATTTTATGGAGCTTGTGGGAGCACACGCAGAAGCTTTGTCCGTGCTTAATTCTGCAGAGATGGAGCCAGTTGAAAAAATAAGCGTTAGCAAAGAAGATGGAGAATTTGCTAGTACTAGTGGGGTTGTCCAAAACGTAGAAGACACTGATGTTCAAAATTCTAAAACAGATGATTTACCAAAAGGGCAGCTTGTTCAAGAAGAAGAGAGAGAGAAAGGTAGAGTTGGGTTGTCAGTCTACTGGAAGTACATCACCACAGCATACGGAGGTGCTCTTGTTCCGTTTATCTTGCTTGGACAGGTTCTCTTTCAGGTCCTTCAAATTGGAAGCAATTACTGGATGGCTTGGGCAACTCCTGCTTCAGAGGATGTGAAACCTGCTGTTGAAACCTCTACACTTCTAACTGTTTATGTTGCTTTGGCCGTTGGAAGTTCTTTCTGTGTCCTCTTCAGATCCATGTTTCTTGCAACAGCTGGGTACAAGACAGCCAGTCTACTCTTTAGTAAAATGCATTTATGCATTTTCCGTGCTCCCATGTCTTTCTTTGATGCCACTCCAAGTGGACGAATCCTAAACAGAGCTTCTACAGACCAAGAAGTAGTGGACTTGAACATGCCTGGTCAAATTGGGGCCCTTGCCAACTCAATGATCCAGCTTCTGGGAATTATTGCAGTGATGTCGCAAGTTGCATGGCAGGTTTTCATCATTTTTATCCCTGTGATTGCAATCTGTATCTGGTTACAGCAATACTACATATCTTCAGCGCGAGAACTTGCACGGTTGGTTGGAGTATGCAAAGCTCCAGTGATACAACACTTTGCTGAAACAATTTCAGGGTCGACAACTATTAGGAGCTTCGATCAAGAATCAAGATTTAGGGATACAAACATGAAACTGATGGATGGTTATGGTCGGCCTAATTTTCATACTGCGGCTGCAATGGAGTGGCTATGTTTTCGCTTGGATATGTTGTCATCTATCACTTTTGGATTCTGTTTGGTTTTCTTGATCTCTATTCCAGCAGGGGTGATAGATCCAGGTGTTGCGGGCTTAGCTGTCACATATGGACTTAATCTAAACATGTTACAGGCGTGGGTTATATGGAATCTTTGCAATGTGGAGAACAGAATTATATCAGTGGAGAGATTACTACAGTACACTTCCATTCCCAGTGAGCCTCCTCTTGTAATAGAATCCAATCAGCCAGATCTTTCTTGGCCATTACGTGGAAAAGTTGACATACATGATCTTCAGGTCCGGTATGCCCCGCACATGCCGCTTGTGTTGCGAGGTATCACATGTAGCTTTCCTGGAGGAATGAAAACTGGGATTGTGGGTAGAACTGGCAGTGGCAAATCGACTCTCATACAGACCCTTTTCCGAATTGTGGATCCTGCTTCTGGCCAGATTTTGATAGATGGTATTGATATATCCTCAATTGGACTGCATGATCTAAGGTCTAGGCTGAGCATTATCCCTCAGGACCCAACCATGTTTGAAGGGACTGTAAGAAGCAATCTGGACCCACTTGAAGAGTACACAGATGAGCAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGGAGAAAGGAAGGAAAGCTGGATGCCACAGTTAGTGAGAATGGAGAGAACTGGAGTATGGGTCAGAGGCAGTTGGTCTGCCTTGGCCGTGTGCTGCTCAAGAAAAGTAAGGTCTTGGTACTTGATGAAGCTACTGCGTCGGTCGATACAGCTACAGATAATCTCATCCAGCAGACCCTTCGCCAACACTTTACTGACTGTACAGTCATCACTATTGCACATCGTATAACTTCTGTTCTTGATAGTGACATGGTTCTGCTTCTGAGTCATGGGCTTATTGACGAATATGATTCTCCTGCAACCTTGCTCGAGAACAAGTCGTCATCTTTTGCTCAGCTTGTGGCAGAGTACACAATGAGGTCGAATTCCAGTTTTGAGTAG

Protein Analysis

1508

Amino Acids

167.54

Weight (kDa)

5.86

Isoelectric Point (pI)

33.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 246
AasI GACNNNNNNGTC 1 cut(s) 4346
Acc36I ACCTGC 3 cut(s) 2476, 2935, 3235
Acc65I GGTACC 1 cut(s) 83
AccB1I GGYRCC 2 cut(s) 83, 1649
AccB7I CCANNNNNTGG 2 cut(s) 3208, 3776
AccI GTMKAC 3 cut(s) 2787, 3043, 3389
AccII CGCG 1 cut(s) 3316
AciI CCGC 8 cut(s) 884, 896, 1051, 1245, 3482, 3596, 3818, 3827
AcoI YGGCCR 4 cut(s) 2970, 3767, 3952, 4228
AcuI CTGAAG 4 cut(s) 2895, 2983, 3294, 3785
AcvI CACGTG 1 cut(s) 2315
AfeI AGCGCT 1 cut(s) 2365
AfiI CCNNNNNNNGG 6 cut(s) 2398, 2485, 3208, 3776, 3937, 3950
AflIII ACRYGT 4 cut(s) 532, 1617, 3630, 3848
AgeI ACCGGT 1 cut(s) 103
AhdI GACNNNNNGTC 1 cut(s) 3039
AhlI ACTAGT 1 cut(s) 2666
AjiI CACGTC 1 cut(s) 1620
AjnI CCWGG 8 cut(s) 79, 386, 947, 2223, 3166, 3586, 3859, 4113
AjuI GAANNNNNNNTTGG 2 cut(s) 1873, 1905
AleI CACNNNNGTG 1 cut(s) 1661
Alw21I GWGCWC 7 cut(s) 34, 397, 1578, 2320, 2575, 2824, 3082
Alw26I GTCTC 3 cut(s) 169, 454, 2420
AlwNI CAGNNNCTG 2 cut(s) 2549, 3208
Ama87I CYCGRG 2 cut(s) 583, 4451
Aor51HI AGCGCT 1 cut(s) 2365
ApaI GGGCCC 1 cut(s) 3184
ApeKI GCWGC 6 cut(s) 1379, 1855, 2471, 2737, 3485, 4237
AseI ATTAAT 1 cut(s) 1569
AsiGI ACCGGT 1 cut(s) 103
Asp700I GAANNNNTTC 2 cut(s) 182, 311
Asp718I GGTACC 1 cut(s) 83
AspLEI GCGC 3 cut(s) 784, 2366, 3316
AsuC2I CCSGG 1 cut(s) 1717
AsuHPI GGTGA 9 cut(s) 206, 848, 937, 1259, 1301, 2109, 2255, 2794, 3589
AvaI CYCGRG 2 cut(s) 583, 4451
AxyI CCTNAGG 1 cut(s) 4029
BaeGI GKGCMC 2 cut(s) 1654, 3184
BaeI ACNNNNGTAYC 2 cut(s) 1794, 1827
BalI TGGCCA 2 cut(s) 3769, 3954
BamHI GGATCC 2 cut(s) 1701, 3940
BanI GGYRCC 2 cut(s) 83, 1649
BanII GRGCYC 3 cut(s) 285, 1578, 3184
BbrPI CACGTG 1 cut(s) 2315
BbsI GAAGAC 3 cut(s) 803, 1589, 2697
Bbv12I GWGCWC 7 cut(s) 34, 397, 1578, 2320, 2575, 2824, 3082
BbvI GCAGC 6 cut(s) 1391, 1842, 2458, 2749, 3472, 4224
BceAI ACGGC 2 cut(s) 2957, 4215
BcgI CGANNNNNNTGC 4 cut(s) 3210, 3244, 4304, 4338
BciT130I CCWGG 8 cut(s) 81, 388, 949, 2225, 3168, 3588, 3861, 4115
BciVI GTATCC 4 cut(s) 87, 1822, 2118, 3424
BclI TGATCA 1 cut(s) 2245
BcnI CCSGG 1 cut(s) 1717
BcoDI GTCTC 3 cut(s) 169, 454, 2420
BcuI ACTAGT 1 cut(s) 2666
BfaI CTAG 9 cut(s) 140, 350, 1242, 1349, 1947, 2031, 2661, 2667, 4011
BfmI CTRYAG 4 cut(s) 2604, 3135, 3701, 4296
BfoI RGCGCY 1 cut(s) 2367
BfuAI ACCTGC 3 cut(s) 2476, 2935, 3235
BfuI GTATCC 4 cut(s) 87, 1822, 2118, 3424
BglII AGATCT 2 cut(s) 1722, 3757
BisI GCNGC 8 cut(s) 1380, 1856, 2472, 2738, 3483, 3486, 3827, 4238
BlpI GCTNAGC 3 cut(s) 3601, 4016, 4476
BlsI GCNGC 8 cut(s) 1381, 1857, 2473, 2739, 3484, 3487, 3828, 4239
BmcAI AGTACT 2 cut(s) 1179, 2665
Bme1390I CCNGG 9 cut(s) 81, 388, 949, 1717, 2225, 3168, 3588, 3861, 4115
BmeRI GACNNNNNGTC 1 cut(s) 3039
BmeT110I CYCGRG 2 cut(s) 583, 4451
BmgBI CACGTC 1 cut(s) 1620
BmrFI CCNGG 9 cut(s) 81, 388, 949, 1717, 2225, 3168, 3588, 3861, 4115
BmrI ACTGGG 3 cut(s) 412, 3714, 3885
BmsI GCATC 6 cut(s) 1007, 1264, 1838, 2362, 3088, 4156
BmuI ACTGGG 3 cut(s) 412, 3714, 3885
BpiI GAAGAC 3 cut(s) 803, 1589, 2697
BpmI CTGGAG 3 cut(s) 3336, 3882, 4216
Bpu10I CCTNAGC 2 cut(s) 1577, 2020
Bpu1102I GCTNAGC 3 cut(s) 3601, 4016, 4476
BpuEI CTTGAG 8 cut(s) 665, 830, 899, 1514, 1531, 1730, 2496, 4226
BpuMI CCSGG 1 cut(s) 1717
BsaAI YACGTR 4 cut(s) 75, 116, 2315, 3776
BsaBI GATNNNNATC 3 cut(s) 512, 2340, 3275
BsaI GGTCTC 1 cut(s) 2420
BsaJI CCNNGG 6 cut(s) 387, 1316, 1984, 2120, 4113, 4225
BsaWI WCCGGW 2 cut(s) 103, 3807
BsaXI ACNNNNNCTCC 6 cut(s) 1538, 1568, 4125, 4155, 4189, 4219
Bsc4I CCNNNNNNNGG 6 cut(s) 2398, 2485, 3208, 3776, 3937, 3950
Bse118I RCCGGY 1 cut(s) 103
Bse21I CCTNAGG 1 cut(s) 4029
Bse3DI GCAATG 3 cut(s) 1383, 3495, 3670
Bse8I GATNNNNATC 3 cut(s) 512, 2340, 3275
BseBI CCWGG 8 cut(s) 81, 388, 949, 2225, 3168, 3588, 3861, 4115
BseDI CCNNGG 6 cut(s) 387, 1316, 1984, 2120, 4113, 4225
BseJI GATNNNNATC 3 cut(s) 512, 2340, 3275
BseLI CCNNNNNNNGG 6 cut(s) 2398, 2485, 3208, 3776, 3937, 3950
BseMI GCAATG 3 cut(s) 1383, 3495, 3670
BseRI GAGGAG 1 cut(s) 3720
BseSI GKGCMC 2 cut(s) 1654, 3184
BseXI GCAGC 6 cut(s) 1391, 1842, 2458, 2749, 3472, 4224
BseYI CCCAGC 2 cut(s) 2410, 3023
BsgI GTGCAG 1 cut(s) 1716
Bsh1236I CGCG 1 cut(s) 3316
Bsh1285I CGRYCG 1 cut(s) 4287
BshNI GGYRCC 2 cut(s) 83, 1649
BshTI ACCGGT 1 cut(s) 103
BsiEI CGRYCG 1 cut(s) 4287
BsiHKAI GWGCWC 7 cut(s) 34, 397, 1578, 2320, 2575, 2824, 3082
BsiHKCI CYCGRG 2 cut(s) 583, 4451
BsiSI CCGG 3 cut(s) 104, 1716, 3808
BslFI GGGAC 3 cut(s) 2089, 2107, 4066
BslI CCNNNNNNNGG 6 cut(s) 2398, 2485, 3208, 3776, 3937, 3950
BsmAI GTCTC 3 cut(s) 169, 454, 2420
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 3 cut(s) 2089, 2107, 4066
BsmI GAATGC 1 cut(s) 2408
Bso31I GGTCTC 1 cut(s) 2420
BsoBI CYCGRG 2 cut(s) 583, 4451
Bsp120I GGGCCC 1 cut(s) 3180
Bsp1407I TGTACA 2 cut(s) 1359, 4343
Bsp1720I GCTNAGC 3 cut(s) 3601, 4016, 4476
Bsp19I CCATGG 1 cut(s) 1316
BspACI CCGC 8 cut(s) 884, 896, 1051, 1245, 3482, 3596, 3818, 3827
BspFNI CGCG 1 cut(s) 3316
BspHI TCATGA 1 cut(s) 2490
BspMAI CTGCAG 1 cut(s) 2608
BspMI ACCTGC 3 cut(s) 2476, 2935, 3235
BspT107I GGYRCC 2 cut(s) 83, 1649
BspTNI GGTCTC 1 cut(s) 2420
BsrDI GCAATG 3 cut(s) 1383, 3495, 3670
BsrFI RCCGGY 1 cut(s) 103
BsrGI TGTACA 2 cut(s) 1359, 4343
BssAI RCCGGY 1 cut(s) 103
BssECI CCNNGG 6 cut(s) 387, 1316, 1984, 2120, 4113, 4225
BssT1I CCWWGG 3 cut(s) 1316, 1984, 4225
Bst2UI CCWGG 8 cut(s) 81, 388, 949, 2225, 3168, 3588, 3861, 4115
Bst6I CTCTTC 3 cut(s) 2748, 3002, 4077
BstAPI GCANNNNNTGC 2 cut(s) 1385, 2906
BstAUI TGTACA 2 cut(s) 1359, 4343
BstBAI YACGTR 4 cut(s) 75, 116, 2315, 3776
BstC8I GCNNGC 4 cut(s) 1687, 1691, 2408, 3598
BstDSI CCRYGG 2 cut(s) 1316, 2120
BstEII GGTNACC 1 cut(s) 907
BstENI CCTNNNNNAGG 1 cut(s) 2396
BstFNI CGCG 1 cut(s) 3316
BstH2I RGCGCY 1 cut(s) 2367
BstHHI GCGC 3 cut(s) 784, 2366, 3316
BstMAI GTCTC 3 cut(s) 169, 454, 2420
BstMCI CGRYCG 1 cut(s) 4287
BstNI CCWGG 8 cut(s) 81, 388, 949, 2225, 3168, 3588, 3861, 4115
BstNSI RCATGY 6 cut(s) 1693, 2208, 3166, 3634, 3826, 3852
BstPI GGTNACC 1 cut(s) 907
BstSCI CCNGG 9 cut(s) 79, 386, 947, 1715, 2223, 3166, 3586, 3859, 4113
BstSFI CTRYAG 4 cut(s) 2604, 3135, 3701, 4296
BstSLI GKGCMC 2 cut(s) 1654, 3184
BstSNI TACGTA 1 cut(s) 75
BstUI CGCG 1 cut(s) 3316
BstV1I GCAGC 6 cut(s) 1391, 1842, 2458, 2749, 3472, 4224
BstV2I GAAGAC 3 cut(s) 803, 1589, 2697
BstX2I RGATCY 7 cut(s) 1701, 1722, 1963, 3002, 3583, 3757, 3940
BstYI RGATCY 7 cut(s) 1701, 1722, 1963, 3002, 3583, 3757, 3940
Bsu36I CCTNAGG 1 cut(s) 4029
BsuI GTATCC 4 cut(s) 87, 1822, 2118, 3424
BtgI CCRYGG 2 cut(s) 1316, 2120
BtrI CACGTC 1 cut(s) 1620
BtsI GCAGTG 2 cut(s) 3228, 3904
BtsIMutI CAGTG 8 cut(s) 1132, 1674, 2694, 3228, 3360, 3693, 3727, 3904
BveI ACCTGC 3 cut(s) 2476, 2935, 3235
Cac8I GCNNGC 4 cut(s) 1687, 1691, 2408, 3598
CaiI CAGNNNCTG 2 cut(s) 2549, 3208
CciI TCATGA 1 cut(s) 2490
CfoI GCGC 3 cut(s) 784, 2366, 3316
Cfr10I RCCGGY 1 cut(s) 103
CseI GACGC 4 cut(s) 565, 2210, 2339, 4269
CspAI ACCGGT 1 cut(s) 103
CspCI CAANNNNNGTGG 2 cut(s) 2263, 2298
DrdI GACNNNNNNGTC 1 cut(s) 4346
DriI GACNNNNNGTC 1 cut(s) 3039
DseDI GACNNNNNNGTC 1 cut(s) 4346
EaeI YGGCCR 4 cut(s) 2970, 3767, 3952, 4228
Eam1104I CTCTTC 3 cut(s) 2748, 3002, 4077
Eam1105I GACNNNNNGTC 1 cut(s) 3039
EarI CTCTTC 3 cut(s) 2748, 3002, 4077
EciI GGCGGA 2 cut(s) 899, 1066
Ecl136II GAGCTC 1 cut(s) 1576
Eco105I TACGTA 1 cut(s) 75
Eco130I CCWWGG 3 cut(s) 1316, 1984, 4225
Eco147I AGGCCT 1 cut(s) 2102
Eco24I GRGCYC 3 cut(s) 285, 1578, 3184
Eco31I GGTCTC 1 cut(s) 2420
Eco32I GATATC 2 cut(s) 514, 2070
Eco47III AGCGCT 1 cut(s) 2365
Eco53kI GAGCTC 1 cut(s) 1576
Eco57I CTGAAG 4 cut(s) 2895, 2983, 3294, 3785
Eco72I CACGTG 1 cut(s) 2315
Eco81I CCTNAGG 1 cut(s) 4029
Eco88I CYCGRG 2 cut(s) 583, 4451
Eco91I GGTNACC 1 cut(s) 907
EcoICRI GAGCTC 1 cut(s) 1576
EcoNI CCTNNNNNAGG 1 cut(s) 2396
EcoO109I RGGNCCY 9 cut(s) 770, 852, 1437, 2221, 2863, 3180, 3181, 4033, 4111
EcoO65I GGTNACC 1 cut(s) 907
EcoRI GAATTC 1 cut(s) 4507
EcoRII CCWGG 8 cut(s) 79, 386, 947, 2223, 3166, 3586, 3859, 4113
EcoRV GATATC 2 cut(s) 514, 2070
EcoT14I CCWWGG 3 cut(s) 1316, 1984, 4225
EcoT22I ATGCAT 3 cut(s) 1311, 3063, 3071
EcoT38I GRGCYC 3 cut(s) 285, 1578, 3184
ErhI CCWWGG 3 cut(s) 1316, 1984, 4225
Esp3I CGTCTC 1 cut(s) 169
FalI AAGNNNNNCTT 6 cut(s) 2018, 2050, 2390, 2422, 2724, 2756
FaqI GGGAC 3 cut(s) 2089, 2107, 4066
FauI CCCGC 2 cut(s) 3589, 3825
FauNDI CATATG 1 cut(s) 3613
FbaI TGATCA 1 cut(s) 2245
FblI GTMKAC 3 cut(s) 2787, 3043, 3389
Fnu4HI GCNGC 8 cut(s) 1380, 1856, 2472, 2738, 3483, 3486, 3827, 4238
FriOI GRGCYC 3 cut(s) 285, 1578, 3184
Fsp4HI GCNGC 8 cut(s) 1380, 1856, 2472, 2738, 3483, 3486, 3827, 4238
FspBI CTAG 9 cut(s) 140, 350, 1242, 1349, 1947, 2031, 2661, 2667, 4011
GlaI GCGC 3 cut(s) 783, 2365, 3315
GluI GCNGC 8 cut(s) 1380, 1856, 2472, 2738, 3483, 3486, 3827, 4238
GsaI CCCAGC 2 cut(s) 2414, 3027
GsuI CTGGAG 3 cut(s) 3336, 3882, 4216
HaeII RGCGCY 1 cut(s) 2367
HapII CCGG 3 cut(s) 104, 1716, 3808
HgaI GACGC 4 cut(s) 565, 2210, 2339, 4269
HhaI GCGC 3 cut(s) 784, 2366, 3316
Hin6I GCGC 3 cut(s) 782, 2364, 3314
HinP1I GCGC 3 cut(s) 782, 2364, 3314
HincII GTYRAC 3 cut(s) 3390, 3787, 4127
HindII GTYRAC 3 cut(s) 3390, 3787, 4127
HindIII AAGCTT 2 cut(s) 1532, 2583
HpaII CCGG 3 cut(s) 104, 1716, 3808
HphI GGTGA 9 cut(s) 206, 848, 937, 1259, 1301, 2109, 2255, 2794, 3589
Hpy99I CGWCG 1 cut(s) 4285
HpyCH4IV ACGT 8 cut(s) 74, 115, 534, 1619, 1863, 2314, 2685, 3775
HpySE526I ACGT 8 cut(s) 74, 115, 534, 1619, 1863, 2314, 2685, 3775
HspAI GCGC 3 cut(s) 782, 2364, 3314
KpnI GGTACC 1 cut(s) 87
Ksp22I TGATCA 1 cut(s) 2245
LmnI GCTCC 7 cut(s) 4, 2560, 2570, 2614, 3085, 3355, 3402
Lsp1109I GCAGC 6 cut(s) 1391, 1842, 2458, 2749, 3472, 4224
LweI GCATC 6 cut(s) 1007, 1264, 1838, 2362, 3088, 4156
MaeI CTAG 9 cut(s) 140, 350, 1242, 1349, 1947, 2031, 2661, 2667, 4011
MaeII ACGT 8 cut(s) 74, 115, 534, 1619, 1863, 2314, 2685, 3775
MfeI CAATTG 2 cut(s) 1902, 3987
MflI RGATCY 7 cut(s) 1701, 1722, 1963, 3002, 3583, 3757, 3940
MlsI TGGCCA 2 cut(s) 3769, 3954
MluNI TGGCCA 2 cut(s) 3769, 3954
MlyI GAGTC 6 cut(s) 695, 1481, 1721, 2071, 3904, 4417
MmeI TCCRAC 3 cut(s) 1976, 2956, 3316
Mox20I TGGCCA 2 cut(s) 3769, 3954
Mph1103I ATGCAT 3 cut(s) 1311, 3063, 3071
MroXI GAANNNNTTC 2 cut(s) 182, 311
MscI TGGCCA 2 cut(s) 3769, 3954
MslI CAYNNNNRTG 2 cut(s) 327, 1661
Msp20I TGGCCA 2 cut(s) 3769, 3954
MspA1I CMGCKG 1 cut(s) 3023
MspI CCGG 3 cut(s) 104, 1716, 3808
MspR9I CCNGG 9 cut(s) 81, 388, 949, 1717, 2225, 3168, 3588, 3861, 4115
MunI CAATTG 2 cut(s) 1902, 3987
Mva1269I GAATGC 1 cut(s) 2408
MvaI CCWGG 8 cut(s) 81, 388, 949, 2225, 3168, 3588, 3861, 4115
MvnI CGCG 1 cut(s) 3316
NciI CCSGG 1 cut(s) 1717
NcoI CCATGG 1 cut(s) 1316
NdeI CATATG 1 cut(s) 3613
NmeAIII GCCGAG 1 cut(s) 923
NmuCI GTSAC 6 cut(s) 352, 1289, 1672, 2115, 3607, 4388
NsiI ATGCAT 3 cut(s) 1311, 3063, 3071
NspI RCATGY 6 cut(s) 1693, 2208, 3166, 3634, 3826, 3852
OliI CACNNNNGTG 1 cut(s) 1661
PaeI GCATGC 1 cut(s) 1693
PaeR7I CTCGAG 1 cut(s) 4451
PagI TCATGA 1 cut(s) 2490
PceI AGGCCT 1 cut(s) 2102
PciI ACATGT 2 cut(s) 3630, 3848
PctI GAATGC 1 cut(s) 2408
PdmI GAANNNNTTC 2 cut(s) 182, 311
PflMI CCANNNNNTGG 2 cut(s) 3208, 3776
PfoI TCCNGGA 2 cut(s) 1715, 3859
PinAI ACCGGT 1 cut(s) 103
PkrI GCNGC 8 cut(s) 1381, 1857, 2473, 2739, 3484, 3487, 3828, 4239
PleI GAGTC 6 cut(s) 694, 1480, 1720, 2071, 3904, 4416
PmaCI CACGTG 1 cut(s) 2315
PmlI CACGTG 1 cut(s) 2315
PpsI GAGTC 6 cut(s) 694, 1480, 1720, 2071, 3904, 4416
Ppu21I YACGTR 4 cut(s) 75, 116, 2315, 3776
PpuMI RGGWCCY 6 cut(s) 770, 852, 1437, 2221, 2863, 4033
PscI ACATGT 2 cut(s) 3630, 3848
PshBI ATTAAT 1 cut(s) 1569
PsiI TTATAA 1 cut(s) 246
Psp124BI GAGCTC 1 cut(s) 1578
Psp5II RGGWCCY 6 cut(s) 770, 852, 1437, 2221, 2863, 4033
Psp6I CCWGG 8 cut(s) 79, 386, 947, 2223, 3166, 3586, 3859, 4113
PspCI CACGTG 1 cut(s) 2315
PspEI GGTNACC 1 cut(s) 907
PspFI CCCAGC 2 cut(s) 2410, 3023
PspGI CCWGG 8 cut(s) 79, 386, 947, 2223, 3166, 3586, 3859, 4113
PspOMI GGGCCC 1 cut(s) 3180
PspPPI RGGWCCY 6 cut(s) 770, 852, 1437, 2221, 2863, 4033
PstI CTGCAG 1 cut(s) 2608
PstNI CAGNNNCTG 2 cut(s) 2549, 3208
PsuI RGATCY 7 cut(s) 1701, 1722, 1963, 3002, 3583, 3757, 3940
PvuII CAGCTG 1 cut(s) 3023
RseI CAYNNNNRTG 2 cut(s) 327, 1661
SacI GAGCTC 1 cut(s) 1578
SalI GTCGAC 1 cut(s) 3388
SatI GCNGC 8 cut(s) 1380, 1856, 2472, 2738, 3483, 3486, 3827, 4238
ScaI AGTACT 2 cut(s) 1179, 2665
SchI GAGTC 6 cut(s) 695, 1481, 1721, 2071, 3904, 4417
ScrFI CCNGG 9 cut(s) 81, 388, 949, 1717, 2225, 3168, 3588, 3861, 4115
SfaNI GCATC 6 cut(s) 1007, 1264, 1838, 2362, 3088, 4156
SfcI CTRYAG 4 cut(s) 2604, 3135, 3701, 4296
Sfr274I CTCGAG 1 cut(s) 4451
SlaI CTCGAG 1 cut(s) 4451
SmiMI CAYNNNNRTG 2 cut(s) 327, 1661
SmlI CTYRAG 9 cut(s) 644, 809, 878, 1510, 1529, 1709, 2511, 4241, 4451
SmoI CTYRAG 9 cut(s) 644, 809, 878, 1510, 1529, 1709, 2511, 4241, 4451
SnaBI TACGTA 1 cut(s) 75
SpeI ACTAGT 1 cut(s) 2666
SphI GCATGC 1 cut(s) 1693
SseBI AGGCCT 1 cut(s) 2102
SsiI CCGC 8 cut(s) 884, 896, 1051, 1245, 3482, 3596, 3818, 3827
SspMI CTAG 9 cut(s) 140, 350, 1242, 1349, 1947, 2031, 2661, 2667, 4011
SstI GAGCTC 1 cut(s) 1578
StuI AGGCCT 1 cut(s) 2102
StyD4I CCNGG 9 cut(s) 79, 386, 947, 1715, 2223, 3166, 3586, 3859, 4113
StyI CCWWGG 3 cut(s) 1316, 1984, 4225
TaiI ACGT 8 cut(s) 77, 118, 537, 1622, 1866, 2317, 2688, 3778
TaqI TCGA 9 cut(s) 1023, 1475, 1914, 3389, 3408, 3908, 4287, 4452, 4505
TaqII GACCGA 2 cut(s) 998, 4273
TatI WGTACW 8 cut(s) 1177, 1359, 2663, 2796, 3705, 4086, 4343, 4491
TauI GCSGC 2 cut(s) 3485, 3829
TscAI CASTG 8 cut(s) 1139, 1674, 2701, 3228, 3360, 3693, 3727, 3904
TseFI GTSAC 6 cut(s) 352, 1289, 1672, 2115, 3607, 4388
TseI GCWGC 6 cut(s) 1379, 1855, 2471, 2737, 3485, 4237
Tsp45I GTSAC 6 cut(s) 352, 1289, 1672, 2115, 3607, 4388
TspGWI ACGGA 5 cut(s) 2514, 2581, 2820, 2829, 3065
TspRI CASTG 8 cut(s) 1139, 1674, 2701, 3228, 3360, 3693, 3727, 3904
Van91I CCANNNNNTGG 2 cut(s) 3208, 3776
VspI ATTAAT 1 cut(s) 1569
XagI CCTNNNNNAGG 1 cut(s) 2396
XceI RCATGY 6 cut(s) 1693, 2208, 3166, 3634, 3826, 3852
XcmI CCANNNNNNNNNTGG 2 cut(s) 919, 3762
XhoI CTCGAG 1 cut(s) 4451
XmiI GTMKAC 3 cut(s) 2787, 3043, 3389
XmnI GAANNNNTTC 2 cut(s) 182, 311
XspI CTAG 9 cut(s) 140, 350, 1242, 1349, 1947, 2031, 2661, 2667, 4011
ZrmI AGTACT 2 cut(s) 1179, 2665
Zsp2I ATGCAT 3 cut(s) 1311, 3063, 3071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.