pycom03g14070

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
15330514 .. 15332264
1751 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g14070.2

Sequence Viewer

Length: 1656 bp
ATGTGTCTTGGGCACCACGTTAACCTCGATATAAACAACCCACATAATCTTCCTTCAATAACCAAAACTGAAACCCCTCCCAGAATATCAGAACCTCCCCAGCAAAAAGCTCCAGAAATCATGGAGTCTTTTTATTCATCAAACCACGGTACTCTTTCAACCTTCTTCTCAAACTACTCATCATTTCTGATGCATCCAGGTACTGATTTTCTTCTCAAACAAGTTTTTATACGTGGGTTTTCCGGTTCATTACACATAGTGTTGTTATGTGTGTTGTTCTTCTCTTGGTTGTGGAGGATATTCAAGGGCGGTGATGGAGGAGGAGGAGAGGCTCCGAAACAGAGGTTTTCGAATAGTCAAAATTCGTACTACAAGCAGGCTTTAATTTGTAGTTTCTGTGTTTCTGGGTTTAGTCTTGTTTTTTGTTTATTGAACTACTTTTGTTGGTACAAAAATGGTTGGTCTGATGAAAAAGTAGTGACCCTCTTGGATTTAGCTGTTAGAACACTCTCTTGGGGTGCAGTTTGTGTTTACCTGCATACCCAATTCTCCAATTCTGCTGAATCCAATAAGTTCCCAAATTTTTTGAGAGTTTGGTGGGGTTTCTATTTCTCTATTTCTTGCTATTGCCTGGTCATAGACATTGTTCTTTTCAAGGACCATCTTTCGTTGCCTATTAAATCTTTGGTTTTCGATACTATCTGTGTTGTTTCGGGTTTGTTTTTCATGTATGTGGGGTTTTTTGGGAAGAAAGAGGGCATATATGCTGTTCTGGAGGAACCCCTTTTGAACGGTAATCGTAGTACTAGTGTAGGTAGTGATGGAGAGTCAAATAGGTCAAAGGGGGGAACAAATGTTAACCCTTATTCGAATGCTGGAATTTTCAGCATCCTTACCTTTGCTTGGATGGGTCCTTTAATTGCGGTTGGGAATAAGAAGGCATTAGACCTTGAGGATGTTCCTGAACTAGATAAGGTTGACAGTGTATTTGGGTCCTATCCTCGTTTTAAAAGTAAGCTCGAGGCCGGGTGTGGTGGGAACGGCAGAGTTACCACACTTCATCTAGTGAAGGCATTAATCTTATCAGCCTGGAAAGAGATTCTCTTGACCGCTTCATTTGCGATTTTTTACACAATGGCGTCTTATGTCGGTCCATATCTGATTGACACATTTGTCCAATACCTCAACGGGCGACGGCAGTTCAAAAATGAAGGCTATGTTTTGGTTTCTGCATTTTTGATTGCAAAGCTCGTGGAGTGCCTCACTCAAAGGCACTGGTTCTTTAAGACGCAACAGGTAGGAGTAAGAATCCGAGCGGCACTTGTTACAGCGATCTATAACAAGGGTTTGACCTTGTCATCCAAGTCCAAGCAGGGCCACACTAGCGGTGAGATTATCAATTTTATGACTGTCGATGCTGAGAGGATCGGTGACTTCACTTGGTACATGCACGATCCATGGATGGTCCTTGTACAAGTTGGCTTGGCCCTAGTGATTTTGTACATAAATCTTGGTCTTGCAGCTATTGCAACATTGATTGCAACGATAATTGTTATGTTGGCAAATGTTCCTTTGGGGTCCTTGCAGCAAAAGTTTCAGGACAAGTTAATGAAGTCCAAAGATAAAAGGATGAAGGCAACATCTGATCGATCTTGA

Protein Analysis

552

Amino Acids

61.72

Weight (kDa)

9.01

Isoelectric Point (pI)

32.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1172
Acc36I ACCTGC 1 cut(s) 543
AccB1I GGYRCC 1 cut(s) 12
AccBSI CCGCTC 1 cut(s) 1316
AciI CCGC 5 cut(s) 309, 923, 1110, 1316, 1386
AclWI GGATC 2 cut(s) 1433, 1448
AcsI RAATTY 3 cut(s) 361, 580, 879
AcyI GRCGYC 1 cut(s) 1139
AdeI CACNNNGTG 1 cut(s) 259
AfaI GTAC 8 cut(s) 151, 202, 368, 449, 805, 1445, 1473, 1502
AfiI CCNNNNNNNGG 1 cut(s) 903
AgsI TTSAA 7 cut(s) 57, 159, 304, 433, 655, 790, 1204
AhlI ACTAGT 1 cut(s) 806
AjnI CCWGG 3 cut(s) 196, 630, 1088
AjuI GAANNNNNNNTTGG 2 cut(s) 496, 528
AluBI AGCT 5 cut(s) 110, 497, 1018, 1249, 1523
AluI AGCT 5 cut(s) 110, 497, 1018, 1249, 1523
AlwI GGATC 2 cut(s) 1433, 1448
AlwNI CAGNNNCTG 1 cut(s) 203
Ama87I CYCGRG 1 cut(s) 1019
AoxI GGCC 3 cut(s) 1023, 1375, 1485
ApeKI GCWGC 2 cut(s) 1520, 1585
ApoI RAATTY 3 cut(s) 361, 580, 879
ArsI GACNNNNNNTTYG 2 cut(s) 971, 1003
AseI ATTAAT 1 cut(s) 1076
AspS9I GGNCC 8 cut(s) 658, 911, 993, 1151, 1375, 1465, 1486, 1578
AsuC2I CCSGG 1 cut(s) 1027
AsuHPI GGTGA 3 cut(s) 323, 1400, 1442
AsuII TTCGAA 2 cut(s) 350, 869
AvaI CYCGRG 1 cut(s) 1019
AvaII GGWCC 6 cut(s) 658, 911, 993, 1151, 1465, 1578
BaeGI GKGCMC 1 cut(s) 15
BanI GGYRCC 1 cut(s) 12
BauI CACGAG 1 cut(s) 1250
BbvI GCAGC 2 cut(s) 1532, 1597
BccI CCATC 5 cut(s) 308, 669, 815, 901, 1456
BceAI ACGGC 2 cut(s) 1057, 1211
BciT130I CCWGG 3 cut(s) 198, 632, 1090
BcnI CCSGG 1 cut(s) 1027
BcuI ACTAGT 1 cut(s) 806
BfaI CTAG 5 cut(s) 807, 968, 1064, 1383, 1490
BfuAI ACCTGC 1 cut(s) 543
BisI GCNGC 3 cut(s) 1317, 1521, 1586
BlsI GCNGC 3 cut(s) 1318, 1522, 1587
BmcAI AGTACT 1 cut(s) 805
Bme1390I CCNGG 4 cut(s) 198, 632, 1027, 1090
Bme18I GGWCC 6 cut(s) 658, 911, 993, 1151, 1465, 1578
BmeT110I CYCGRG 1 cut(s) 1019
BmgT120I GGNCC 8 cut(s) 658, 911, 993, 1151, 1375, 1465, 1486, 1578
BmiI GGNNCC 6 cut(s) 14, 333, 780, 912, 994, 1579
BmrFI CCNGG 4 cut(s) 198, 632, 1027, 1090
BmsI GCATC 4 cut(s) 180, 202, 897, 1405
BpmI CTGGAG 2 cut(s) 96, 794
Bpu14I TTCGAA 2 cut(s) 350, 869
BpuEI CTTGAG 1 cut(s) 971
BpuMI CCSGG 1 cut(s) 1027
Bsa29I ATCGAT 1 cut(s) 1648
BsaAI YACGTR 1 cut(s) 233
BsaHI GRCGYC 1 cut(s) 1139
BsaJI CCNNGG 2 cut(s) 145, 1457
BsaWI WCCGGW 1 cut(s) 242
Bsc4I CCNNNNNNNGG 1 cut(s) 903
Bse1I ACTGG 1 cut(s) 1280
BseBI CCWGG 3 cut(s) 198, 632, 1090
BseCI ATCGAT 1 cut(s) 1648
BseDI CCNNGG 2 cut(s) 145, 1457
BseGI GGATG 7 cut(s) 193, 888, 912, 961, 1358, 1467, 1635
BseLI CCNNNNNNNGG 1 cut(s) 903
BseMII CTCAG 1 cut(s) 1410
BseNI ACTGG 1 cut(s) 1280
BseRI GAGGAG 3 cut(s) 333, 336, 339
BseSI GKGCMC 1 cut(s) 15
BseXI GCAGC 2 cut(s) 1532, 1597
BseYI CCCAGC 1 cut(s) 99
BsgI GTGCAG 1 cut(s) 540
BshFI GGCC 3 cut(s) 1025, 1377, 1487
BshNI GGYRCC 1 cut(s) 12
BshVI ATCGAT 1 cut(s) 1648
BsiHKCI CYCGRG 1 cut(s) 1019
BsiSI CCGG 2 cut(s) 243, 1026
BslI CCNNNNNNNGG 1 cut(s) 903
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 3 cut(s) 1025, 1377, 1487
BsoBI CYCGRG 1 cut(s) 1019
Bsp119I TTCGAA 2 cut(s) 350, 869
Bsp1286I GDGCHC 1 cut(s) 15
Bsp1407I TGTACA 2 cut(s) 1471, 1500
Bsp143I GATC 5 cut(s) 1332, 1425, 1453, 1645, 1649
Bsp19I CCATGG 1 cut(s) 1457
BspACI CCGC 5 cut(s) 309, 923, 1110, 1316, 1386
BspANI GGCC 3 cut(s) 1025, 1377, 1487
BspCNI CTCAG 1 cut(s) 1411
BspDI ATCGAT 1 cut(s) 1648
BspLI GGNNCC 6 cut(s) 14, 333, 780, 912, 994, 1579
BspMI ACCTGC 1 cut(s) 543
BspPI GGATC 2 cut(s) 1433, 1448
BspT104I TTCGAA 2 cut(s) 350, 869
BspT107I GGYRCC 1 cut(s) 12
BsrBI CCGCTC 1 cut(s) 1316
BsrGI TGTACA 2 cut(s) 1471, 1500
BsrI ACTGG 1 cut(s) 1280
BssECI CCNNGG 2 cut(s) 145, 1457
BssMI GATC 5 cut(s) 1332, 1425, 1453, 1645, 1649
BssNI GRCGYC 1 cut(s) 1139
BssSI CACGAG 1 cut(s) 1250
BssT1I CCWWGG 1 cut(s) 1457
Bst2BI CACGAG 1 cut(s) 1250
Bst2UI CCWGG 3 cut(s) 198, 632, 1090
Bst4CI ACNGT 4 cut(s) 149, 794, 983, 1411
BstACI GRCGYC 1 cut(s) 1139
BstAPI GCANNNNNTGC 1 cut(s) 1526
BstAUI TGTACA 2 cut(s) 1471, 1500
BstBAI YACGTR 1 cut(s) 233
BstBI TTCGAA 2 cut(s) 350, 869
BstC8I GCNNGC 1 cut(s) 378
BstDEI CTNAG 1 cut(s) 1419
BstDSI CCRYGG 2 cut(s) 145, 1457
BstF5I GGATG 7 cut(s) 193, 888, 912, 961, 1358, 1467, 1635
BstKTI GATC 5 cut(s) 1335, 1428, 1456, 1648, 1652
BstMBI GATC 5 cut(s) 1332, 1425, 1453, 1645, 1649
BstMWI GCNNNNNNNGC 3 cut(s) 1118, 1383, 1526
BstNI CCWGG 3 cut(s) 198, 632, 1090
BstNSI RCATGY 1 cut(s) 1450
BstSCI CCNGG 4 cut(s) 196, 630, 1025, 1088
BstSLI GKGCMC 1 cut(s) 15
BstV1I GCAGC 2 cut(s) 1532, 1597
Bsu15I ATCGAT 1 cut(s) 1648
BsuRI GGCC 3 cut(s) 1025, 1377, 1487
BsuTUI ATCGAT 1 cut(s) 1648
BtgI CCRYGG 2 cut(s) 145, 1457
BtsCI GGATG 7 cut(s) 193, 888, 912, 961, 1358, 1467, 1635
BtsIMutI CAGTG 2 cut(s) 988, 1273
BveI ACCTGC 1 cut(s) 543
Cac8I GCNNGC 1 cut(s) 378
CaiI CAGNNNCTG 1 cut(s) 203
Cfr13I GGNCC 8 cut(s) 658, 911, 993, 1151, 1375, 1465, 1486, 1578
ClaI ATCGAT 1 cut(s) 1648
CseI GACGC 2 cut(s) 1128, 1297
Csp6I GTAC 8 cut(s) 150, 201, 367, 448, 804, 1444, 1472, 1501
CspCI CAANNNNNGTGG 2 cut(s) 1233, 1268
CviAII CATG 4 cut(s) 121, 727, 1447, 1458
CviQI GTAC 8 cut(s) 150, 201, 367, 448, 804, 1444, 1472, 1501
DdeI CTNAG 1 cut(s) 1419
DpnI GATC 5 cut(s) 1334, 1427, 1455, 1647, 1651
DpnII GATC 5 cut(s) 1332, 1425, 1453, 1645, 1649
DraI TTTAAA 1 cut(s) 1009
DraIII CACNNNGTG 1 cut(s) 259
DrdI GACNNNNNNGTC 1 cut(s) 1172
DseDI GACNNNNNNGTC 1 cut(s) 1172
Eco130I CCWWGG 1 cut(s) 1457
Eco47I GGWCC 6 cut(s) 658, 911, 993, 1151, 1465, 1578
Eco88I CYCGRG 1 cut(s) 1019
EcoO109I RGGNCCY 3 cut(s) 911, 993, 1578
EcoRII CCWGG 3 cut(s) 196, 630, 1088
EcoT14I CCWWGG 1 cut(s) 1457
EcoT22I ATGCAT 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 1457
FaeI CATG 4 cut(s) 124, 730, 1450, 1461
FatI CATG 4 cut(s) 120, 726, 1446, 1457
Fnu4HI GCNGC 3 cut(s) 1317, 1521, 1586
FokI GGATG 7 cut(s) 180, 875, 919, 968, 1345, 1474, 1642
Fsp4HI GCNGC 3 cut(s) 1317, 1521, 1586
FspBI CTAG 5 cut(s) 807, 968, 1064, 1383, 1490
GluI GCNGC 3 cut(s) 1317, 1521, 1586
GsaI CCCAGC 1 cut(s) 103
GsuI CTGGAG 2 cut(s) 96, 794
HaeIII GGCC 3 cut(s) 1025, 1377, 1487
HapII CCGG 2 cut(s) 243, 1026
HgaI GACGC 2 cut(s) 1128, 1297
Hin1I GRCGYC 1 cut(s) 1139
Hin1II CATG 4 cut(s) 124, 730, 1450, 1461
HincII GTYRAC 3 cut(s) 22, 859, 979
HindII GTYRAC 3 cut(s) 22, 859, 979
HinfI GANTC 5 cut(s) 125, 563, 827, 1099, 1308
HpaI GTTAAC 2 cut(s) 22, 859
HpaII CCGG 2 cut(s) 243, 1026
HphI GGTGA 3 cut(s) 323, 1400, 1442
Hpy166II GTNNAC 4 cut(s) 22, 532, 859, 979
Hpy188I TCNGA 7 cut(s) 91, 189, 336, 466, 1161, 1313, 1645
Hpy188III TCNNGA 6 cut(s) 113, 773, 962, 1105, 1598, 1653
Hpy8I GTNNAC 4 cut(s) 22, 532, 859, 979
Hpy99I CGWCG 1 cut(s) 1197
HpyAV CCTTC 6 cut(s) 63, 172, 931, 1063, 1205, 1627
HpyCH4III ACNGT 4 cut(s) 149, 794, 983, 1411
HpyCH4IV ACGT 2 cut(s) 18, 232
HpyF10VI GCNNNNNNNGC 3 cut(s) 1118, 1383, 1526
HpyF3I CTNAG 1 cut(s) 1419
HpySE526I ACGT 2 cut(s) 18, 232
Hsp92I GRCGYC 1 cut(s) 1139
Hsp92II CATG 4 cut(s) 124, 730, 1450, 1461
KspAI GTTAAC 2 cut(s) 22, 859
Kzo9I GATC 5 cut(s) 1332, 1425, 1453, 1645, 1649
LmnI GCTCC 2 cut(s) 115, 337
Lsp1109I GCAGC 2 cut(s) 1532, 1597
LweI GCATC 4 cut(s) 180, 202, 897, 1405
MaeI CTAG 5 cut(s) 807, 968, 1064, 1383, 1490
MaeII ACGT 2 cut(s) 18, 232
MaeIII GTNAC 4 cut(s) 478, 1048, 1324, 1430
MalI GATC 5 cut(s) 1334, 1427, 1455, 1647, 1651
MbiI CCGCTC 1 cut(s) 1316
MboI GATC 5 cut(s) 1332, 1425, 1453, 1645, 1649
MboII GAAGA 5 cut(s) 41, 157, 203, 271, 760
MhlI GDGCHC 1 cut(s) 15
MluCI AATT 9 cut(s) 361, 384, 545, 553, 580, 879, 918, 1399, 1548
MlyI GAGTC 2 cut(s) 134, 836
Mph1103I ATGCAT 1 cut(s) 195
MseI TTAA 9 cut(s) 21, 383, 678, 858, 917, 1008, 1076, 1284, 1607
MslI CAYNNNNRTG 1 cut(s) 731
MspI CCGG 2 cut(s) 243, 1026
MspR9I CCNGG 4 cut(s) 198, 632, 1027, 1090
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 3 cut(s) 198, 632, 1090
MwoI GCNNNNNNNGC 3 cut(s) 1118, 1383, 1526
NciI CCSGG 1 cut(s) 1027
NcoI CCATGG 1 cut(s) 1457
NdeII GATC 5 cut(s) 1332, 1425, 1453, 1645, 1649
NlaIII CATG 4 cut(s) 124, 730, 1450, 1461
NlaIV GGNNCC 6 cut(s) 14, 333, 780, 912, 994, 1579
NmuCI GTSAC 2 cut(s) 478, 1430
NsiI ATGCAT 1 cut(s) 195
NspI RCATGY 1 cut(s) 1450
NspV TTCGAA 2 cut(s) 350, 869
PaeR7I CTCGAG 1 cut(s) 1019
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PctI GAATGC 1 cut(s) 877
PfeI GAWTC 3 cut(s) 563, 1099, 1308
PflFI GACNNNGTC 1 cut(s) 1354
PkrI GCNGC 3 cut(s) 1318, 1522, 1587
PleI GAGTC 2 cut(s) 133, 835
PpsI GAGTC 2 cut(s) 133, 835
Ppu21I YACGTR 1 cut(s) 233
PpuMI RGGWCCY 3 cut(s) 911, 993, 1578
PshBI ATTAAT 1 cut(s) 1076
Psp5II RGGWCCY 3 cut(s) 911, 993, 1578
Psp6I CCWGG 3 cut(s) 196, 630, 1088
PspFI CCCAGC 1 cut(s) 99
PspGI CCWGG 3 cut(s) 196, 630, 1088
PspN4I GGNNCC 6 cut(s) 14, 333, 780, 912, 994, 1579
PspPI GGNCC 8 cut(s) 658, 911, 993, 1151, 1375, 1465, 1486, 1578
PspPPI RGGWCCY 3 cut(s) 911, 993, 1578
PspXI VCTCGAGB 1 cut(s) 1019
PstNI CAGNNNCTG 1 cut(s) 203
PsyI GACNNNGTC 1 cut(s) 1354
RsaI GTAC 8 cut(s) 151, 202, 368, 449, 805, 1445, 1473, 1502
RsaNI GTAC 8 cut(s) 150, 201, 367, 448, 804, 1444, 1472, 1501
RseI CAYNNNNRTG 1 cut(s) 731
SaqAI TTAA 9 cut(s) 21, 383, 678, 858, 917, 1008, 1076, 1284, 1607
SatI GCNGC 3 cut(s) 1317, 1521, 1586
Sau3AI GATC 5 cut(s) 1332, 1425, 1453, 1645, 1649
Sau96I GGNCC 8 cut(s) 658, 911, 993, 1151, 1375, 1465, 1486, 1578
ScaI AGTACT 1 cut(s) 805
SchI GAGTC 2 cut(s) 134, 836
ScrFI CCNGG 4 cut(s) 198, 632, 1027, 1090
SduI GDGCHC 1 cut(s) 15
SfaNI GCATC 4 cut(s) 180, 202, 897, 1405
Sfr274I CTCGAG 1 cut(s) 1019
SfuI TTCGAA 2 cut(s) 350, 869
SinI GGWCC 6 cut(s) 658, 911, 993, 1151, 1465, 1578
SlaI CTCGAG 1 cut(s) 1019
SmiMI CAYNNNNRTG 1 cut(s) 731
SmlI CTYRAG 2 cut(s) 950, 1019
SmoI CTYRAG 2 cut(s) 950, 1019
SpeI ACTAGT 1 cut(s) 806
Sse9I AATT 9 cut(s) 361, 384, 545, 553, 580, 879, 918, 1399, 1548
SsiI CCGC 5 cut(s) 309, 923, 1110, 1316, 1386
SspMI CTAG 5 cut(s) 807, 968, 1064, 1383, 1490
StyD4I CCNGG 4 cut(s) 196, 630, 1025, 1088
StyI CCWWGG 1 cut(s) 1457
TaaI ACNGT 4 cut(s) 149, 794, 983, 1411
TaiI ACGT 2 cut(s) 21, 235
TaqI TCGA 7 cut(s) 27, 350, 693, 869, 1020, 1413, 1648
TaqII GACCGA 1 cut(s) 1139
TasI AATT 9 cut(s) 361, 384, 545, 553, 580, 879, 918, 1399, 1548
TatI WGTACW 3 cut(s) 803, 1471, 1500
TauI GCSGC 1 cut(s) 1319
TfiI GAWTC 3 cut(s) 563, 1099, 1308
Tru1I TTAA 9 cut(s) 21, 383, 678, 858, 917, 1008, 1076, 1284, 1607
Tru9I TTAA 9 cut(s) 21, 383, 678, 858, 917, 1008, 1076, 1284, 1607
TscAI CASTG 2 cut(s) 988, 1280
TseFI GTSAC 2 cut(s) 478, 1430
TseI GCWGC 2 cut(s) 1520, 1585
Tsp45I GTSAC 2 cut(s) 478, 1430
TspDTI ATGAA 9 cut(s) 126, 237, 483, 715, 1049, 1104, 1224, 1625, 1646
TspRI CASTG 2 cut(s) 988, 1280
Tth111I GACNNNGTC 1 cut(s) 1354
VpaK11BI GGWCC 6 cut(s) 658, 911, 993, 1151, 1465, 1578
VspI ATTAAT 1 cut(s) 1076
XapI RAATTY 3 cut(s) 361, 580, 879
XceI RCATGY 1 cut(s) 1450
XhoI CTCGAG 1 cut(s) 1019
XspI CTAG 5 cut(s) 807, 968, 1064, 1383, 1490
ZrmI AGTACT 1 cut(s) 805
Zsp2I ATGCAT 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.