RchiOBHm_Chr4g0406401

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
28024113 .. 28030267
6155 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37776

Sequence Viewer

Length: 4509 bp
ATGGAGCTTTTTCATTCCTCAATGCACCTACTCTCGCACCACTCGTCCTTCATGTCTCCAGGTACCGATTTCCTTCTTAAACCCATTTTCATTCGTGGGTTTTCTGGATCATTACATCTCCTTCTGTTATTTGTGTTGCTTGTCTCTTGGTTGTGGAAGAAATTCAAGGTGGGTGATGGGGGAGAGGCCCCAAAAGAGGGGTCTAGGAATAGGACAGCTCTGTACTACAGGCACACTCTAATATGTTGTCTTGCTGTTTCTGCTCTTAGTGTTGCCTTTTGTTTATTCTACTACTTTTCCTGGTATAAACATGTCTGGTCTGAAGAAAAGCTAGTGACCCTTTCTGATTTAGCAATTAGAACACTTAGTTGGGGTGCAGTTTTTGTTTACTTGCATTCCCACTTCTCTAGTTCTGGTGAATCAAAGTTTCCGTTCTTACTCAGAGTTTGGTGGGGTTTTTACTTTTCTTTATCTTGCTATTGCGTTGTCATAGACATTGTTCTCTACCAAAAACACGTTGCCTTACCCATTCAATCTCTAGTTTCTGATGCTGCCTTCCTTGTCTCTGCTCTCTTCTTTATATATGTGGGGTTTATTGGGTCGAAAGAGGGTAGAGATACCCTTCTTGAGGAACCCCTTTTGAATGGTAGTAGAGATTCTAGTGTAGGTAACACTGCAGAATCAAATAAGTCCACAGGGGATGCAACTGTGAAAATCCCTTTTTCAAATGCTGGGATTTTCAGCATCCTCACCTTTTCTTGGATGAGTCCTTTAATCGCGGTGGGTAATAAGAAAACATTAGACCTTGAAGACGTTCCTGAACTAGACAAGGGTGATAGTGTAGTTGGGTCCTTTCCAGTTTTTAGAAATAAGCTCGAGTCGGAGCGTGGTGCTCTTAGCAGAGTGACCACGCTTCATCTGGTGAAGGCATTAATCTTCTCGGCCTGGAGAGAGATTCTTTTGACAGCTTTCTTTGTGCTTCTTTACACAATGGCTTCTTATGTTGGCCCATATCTAATCGACACATTTGTGCAATACCTTTATGGGCGACGTGAGTTTGAATATGAGGGCTATGCTTTAGTTTCTGCCTTTTTGGTGGCGAAGCTCGTGGAGTGCCTCTCTCAGAGGCACTGGTTCTTTAGGGCGCAGCAGATAGGAGTAAGAATAAGAGCTGTACTGGTTGCCATGATCTATAATAAGGGTTTGACCCTGTCTTGCCAGTCCAAGCAGTGCCACACTAGTGGTGAGATTATCAATTTTATGACTGTTGATGCTGAGAGGGTTGGTGACTTCACTTGGTACATGCATGACCCATGGATGGTCGTTCTACAAGTTGCTTTAGCCCTCTTAATTTTGTATAAAAATCTTGGCCTTGCTGTAATTGCAACTTTAGTTGCAACAATAGTTGTTATGCTGGCAAATGTTCCTTTGGGGAAATTGCAAGAGAAGTTTCAGGACAAGTTGATGGAGTCAAAGGACAGAAGGATGAAGGCAACATCGGAGATTTTAAGGAACATGCGGATTCTCAAGCTGCAGGCATGGGAGATGAAGTTTTTGTCTAAGATTATTGACCTCAGGAAGACTGAGACAGGATGGTTAAGAAAGTTTGTTTATACTTCGGCCATGACCACATTTGTCTTCTGGGGTGCCCCCACATTTGTGTCTGTGGTCACTTTTGTTGCTTGCATGCTTTTGGGGATCCCACTGGAATCAGGGAAGATCTTATCTGCGCTTGCAACATTCAGAATTCTTCAAGAGCCCATCTACAGTCTTCCAGACACAATTTCAATGATAGCACAGACAAAGGTATCCCTTGATAGAATTGCATCGTTCCTTTCTCTTGATGAGTTGAAGCCTGATGTTGTAGAGAACCTTCCTAGAGGTAGTTCTGATACTGCAATTGAAATATTGGATGCAAATTTCTCTTGGGAATTATCTTCGCCTAACCCTACATTGAAGGATATAAATCTCAAAGTTATCCATGGTATGAAGGTTGCTGTTTGTGGTACCGTTGGCTCAGGCAAATCAAGCTTACTTTCTTGTATTCTGGGAGAAGTTCCCAAGATATCTGGGACTCTTAAGTTGTGTGGGACAAAGGCCTATGTTTCTCAGTCACCATGGATACAAAGTGGTAAGATAGAACAAAACATATTGTTTGGTAAAGAGATGGACAGAGAAAGGTACGAGGGGGTTCTTGAAGCATGTTCGTTGAAGAAGGACCTTGAAATTCTATCATTTGGTGATCAGACGGTTATAGGGGAAAGGGGAATCAATTTAAGTGGAGGTCAGAAGCAGAGAATACAAATTGCACGAGCTTTGTACCAAGATGCTGATATCTATCTGTTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGATCTCACCTTTTCAAGGAATGCTTGATGGACCTCTTGAGTTCCAAAACAGTAATCTATGTTACTCATCAAGTGGAGTTCTTACCTGCTGCTGATATTGTCTTGGTCATGAAAGACGGAAAGATCACTCAAGCTGGAAAGTTCAATGACATTCTTAATTCAGGAACTGATTTTATGGATCTTGTGGGAGCACACAATGAAGCTTTGTCTGCGCTTGATTCTGTTGGGGTAGGACCGGTTGAAAAAACAAGCATCAGCAAAGAAGATAACAATTCGGCTAGCACTACTGGGGCTGTCCAAAAAGTAGACAACAGAGATGTTCAAGATAGTAAAATAGATGATTTAGGCGTGCCAAAAGGGCAGCTTGTTCAAGAAGAAGAGAGAGAGAAAGGTAAGGTTGGGTTTTCAGTGTACTGGAAATACATTACCACAGCATATGGAGGAGCTCTCGTTCCTTTTATATTACTTGCACAGATTCTCTTTCAACTCCTTCAAATTGGAAGCAATTACTGGATGGCTTGGGCAACTCCTGTGTCAGCAGACATGAAACCAACTGTTACAAGCTCTACGCTTATAATTGTCTATGTGGCTTTGGCTGTTGGAAGTTCTTTTTGCATCCTTTTCAGATCTCTGCTTCTTGCAACAGCTGGGTACAAGACAGCCACTATACTCTTCAATAAAATGCACTTGTGCATATTCCGTGCTCCCATGTCATTCTTCGATGCCACTCCAAGCTTCTACAGACCAAAATGCAGTGGACATGAACATTTCAAATCAAATTGGGGCCTTTGCCTTCTCAATGATACAGCTTTTGGAATTATTGCAGTGATGTCTCAGGTGGCATGGCAAGTTTTCATCATATTTATACCTGTGATTACAGCCTGTGTTTGGTATCAGCAATATTACATACCTTCAGCACGAGAACTAGCAAGATTGGTTGGAGTATGCAAAGCTCCTGTGATACAACATTTTGCCGAAACAATTTCAGGGTCAACTACTATTAGGAGCTTCAATCAAGAATCTAGATTCCGAGATACCAACATGACACTGATGGATGGATATGGTCGGCCAAAGTTCTACACAGCTGGTGCGATGGAATGGCTATGCTTTCGCTTGGATGTGTTGTCATCCATTACATTTGCATTCTGTTTAATTTTCTTGATCTCTGTTCCAGAAGGAGTGATTGATCCAGGCATTGCTGGCTTAGCCGTCACATATGGACTTAACCTAAACATGTTACAAGCTTGGGTTATATGGAATCTTTGCAATATGGAAAACAAGATAATATCTGTGGAGAGAATACTACAGTATACTACTAGTATACCAAGTGAACCTCCTCTGGTAATAGATTCTAACAGACCTGATCATTCCTGGCCATTGCAAGGAAAAGTTGATCTGCATGATCTTCAGGTGCGGTATGCTCCACACATGCCACTTGTGTTGCGGGGTCTTACATGCTCCTTCCCTGGAGGAATGAAAACTGGGATTGTGGGGAGAACTGGCAGTGGAAAGTCAACTCTCATACAAACTCTTTTCCGAATTGTCGATCCTGCTGCTGGCCGGATTTTGATAGATGGCATCGATATCTCTTCTATTGGATTGCATGATCTGCGGTCTAGGCTAAGCATTATCCCTCAGGACCCAACCATGTTTGAAGGAACTGTAAGAAGCAATCTGGACCCACTTGAAGAGTATACAGATGAACAAATTTGGGAGGCTCTGGATAAATGCCAACTTGGAGATGAAGTTAGGAAGAAACAAGGGAAGCTTGATTCTGCAGTGAGTGAAAATGGAGAGAACTGGAGTATGGGTCAGAGGCAGCTGGTTTGCCTGGGCCGTGTGCTCCTCAAGAAAAGTAAAGTCCTGGTGCTTGATGAAGCTACTGCATCTGTTGATACTGCTACAGATAATTTGATTCAGCAGACCCTTCGGCACCACTTTTCAGACTGTACTGTCATTACTATTGCGCATCGAATAACTTCTGTTCTTGACAGTGACATGGTTCTACTTCTAAGTCATGGGCTGATTGAGGAATGTGATTCTCCTGCAAGACTGCTAGAAAACAAGTCATCATCTTTTGCCCAACTCGTAGCAGAGTACACAATCAGATCGAATTCCACTTTTGAGTAG

Protein Analysis

1502

Amino Acids

167.45

Weight (kDa)

6.55

Isoelectric Point (pI)

35.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 320 - 587 1.5e-20 ABC transporter transmembrane region
ABC_tran PF00005 652 - 786 1.4e-19 ABC transporter
ABC_membrane PF00664 1063 - 1181 3.2e-11 ABC transporter transmembrane region
ABC_tran PF00005 1274 - 1422 1.3e-27 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2954
AasI GACNNNNNNGTC 1 cut(s) 4331
Acc16I TGCGCA 1 cut(s) 4347
Acc36I ACCTGC 1 cut(s) 2473
Acc65I GGTACC 2 cut(s) 62, 2006
AccB1I GGYRCC 4 cut(s) 62, 1646, 2006, 4311
AccI GTMKAC 4 cut(s) 2685, 3689, 3700, 4073
AccII CGCG 1 cut(s) 779
AciI CCGC 5 cut(s) 779, 1519, 3793, 3823, 3991
AclWI GGATC 8 cut(s) 115, 1693, 1706, 2345, 2389, 2565, 3560, 3920
AcoI YGGCCR 4 cut(s) 1620, 3446, 3752, 3937
AcsI RAATTY 6 cut(s) 161, 1746, 1918, 2226, 4086, 4492
AcuI CTGAAG 3 cut(s) 342, 3276, 3770
AfiI CCNNNNNNNGG 9 cut(s) 196, 197, 628, 759, 1318, 2395, 3267, 3761, 3935
AflII CTTAAG 1 cut(s) 2078
AflIII ACRYGT 3 cut(s) 310, 514, 3612
AgeI ACCGGT 1 cut(s) 2614
AhlI ACTAGT 2 cut(s) 1238, 3695
AjiI CACGTC 1 cut(s) 1052
AjnI CCWGG 8 cut(s) 58, 299, 944, 3568, 3749, 3844, 4209, 4242
AjuI GAANNNNNNNTTGG 2 cut(s) 352, 384
AleI CACNNNNGTG 3 cut(s) 1028, 1239, 1658
AloI GAACNNNNNNTCC 2 cut(s) 2814, 2846
Alw21I GWGCWC 5 cut(s) 895, 2572, 2827, 3085, 4224
Alw26I GTCTC 5 cut(s) 60, 148, 568, 1580, 3216
AlwI GGATC 8 cut(s) 115, 1693, 1706, 2345, 2389, 2565, 3560, 3920
AlwNI CAGNNNCTG 1 cut(s) 2546
Ama87I CYCGRG 1 cut(s) 875
ApeKI GCWGC 7 cut(s) 551, 1147, 1531, 2468, 2740, 3932, 4198
ApoI RAATTY 6 cut(s) 161, 1746, 1918, 2226, 4086, 4492
ArsI GACNNNNNNTTYG 2 cut(s) 185, 217
AseI ATTAAT 1 cut(s) 932
AsiGI ACCGGT 1 cut(s) 2614
Asp700I GAANNNNTTC 3 cut(s) 161, 813, 4357
Asp718I GGTACC 2 cut(s) 62, 2006
AspLEI GCGC 4 cut(s) 1147, 1732, 2593, 4348
AsuNHI GCTAGC 1 cut(s) 2657
AvaI CYCGRG 1 cut(s) 875
AvaII GGWCC 6 cut(s) 849, 2218, 2410, 2612, 4018, 4057
AxyI CCTNAGG 2 cut(s) 1574, 4014
BaeGI GKGCMC 1 cut(s) 1651
BaeI ACNNNNGTAYC 2 cut(s) 1791, 1824
BalI TGGCCA 1 cut(s) 3754
BamHI GGATCC 1 cut(s) 1698
BanI GGYRCC 4 cut(s) 62, 1646, 2006, 4311
BanII GRGCYC 2 cut(s) 1761, 2827
BarI GAAGNNNNNNTAC 2 cut(s) 1857, 1889
BauI CACGAG 3 cut(s) 1106, 2310, 3297
BbsI GAAGAC 4 cut(s) 816, 1586, 1630, 1763
Bbv12I GWGCWC 5 cut(s) 895, 2572, 2827, 3085, 4224
BbvI GCAGC 7 cut(s) 538, 1159, 1518, 2455, 2752, 3919, 4210
BceAI ACGGC 2 cut(s) 3572, 4200
BcgI CGANNNNNNTGC 4 cut(s) 3914, 3948, 4289, 4323
BciT130I CCWGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
BciVI GTATCC 2 cut(s) 1819, 2115
BclI TGATCA 2 cut(s) 2242, 3742
BcoDI GTCTC 5 cut(s) 60, 148, 568, 1580, 3216
BcuI ACTAGT 2 cut(s) 1238, 3695
BfmI CTRYAG 8 cut(s) 226, 675, 1532, 1765, 3118, 3683, 4155, 4281
BfrI CTTAAG 1 cut(s) 2078
BfuAI ACCTGC 1 cut(s) 2473
BfuI GTATCC 2 cut(s) 1819, 2115
BglI GCCNNNNNGGC 1 cut(s) 2737
BglII AGATCT 2 cut(s) 1719, 3005
BisI GCNGC 7 cut(s) 552, 1148, 1532, 2469, 2741, 3933, 4199
BlpI GCTNAGC 2 cut(s) 3583, 4001
BlsI GCNGC 7 cut(s) 553, 1149, 1533, 2470, 2742, 3934, 4200
Bme1390I CCNGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
Bme18I GGWCC 6 cut(s) 849, 2218, 2410, 2612, 4018, 4057
BmeT110I CYCGRG 1 cut(s) 875
BmgBI CACGTC 1 cut(s) 1052
BmrFI CCNGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
BmrI ACTGGG 2 cut(s) 2676, 3870
BmtI GCTAGC 1 cut(s) 2661
BmuI ACTGGG 2 cut(s) 2676, 3870
BpiI GAAGAC 4 cut(s) 816, 1586, 1630, 1763
BplI GAGNNNNNCTC 4 cut(s) 1103, 1135, 2811, 2843
BpmI CTGGAG 4 cut(s) 42, 967, 3867, 4201
Bpu10I CCTNAGC 1 cut(s) 2017
Bpu1102I GCTNAGC 2 cut(s) 3583, 4001
BpuEI CTTGAG 5 cut(s) 647, 1511, 2437, 2493, 4211
Bsa29I ATCGAT 1 cut(s) 3960
BsaBI GATNNNNATC 2 cut(s) 1965, 2337
BsaJI CCNNGG 5 cut(s) 1313, 1981, 2117, 3844, 4210
BsaWI WCCGGW 1 cut(s) 2614
BsaXI ACNNNNNCTCC 8 cut(s) 1535, 1565, 2814, 2844, 4110, 4140, 4174, 4204
Bsc4I CCNNNNNNNGG 9 cut(s) 196, 197, 628, 759, 1318, 2395, 3267, 3761, 3935
Bse118I RCCGGY 1 cut(s) 2614
Bse21I CCTNAGG 2 cut(s) 1574, 4014
Bse3DI GCAATG 2 cut(s) 3573, 3755
Bse8I GATNNNNATC 2 cut(s) 1965, 2337
BseBI CCWGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
BseCI ATCGAT 1 cut(s) 3960
BseDI CCNNGG 5 cut(s) 1313, 1981, 2117, 3844, 4210
BseJI GATNNNNATC 2 cut(s) 1965, 2337
BseLI CCNNNNNNNGG 9 cut(s) 196, 197, 628, 759, 1318, 2395, 3267, 3761, 3935
BseMI GCAATG 2 cut(s) 3573, 3755
BseMII CTCAG 9 cut(s) 454, 1136, 1266, 1575, 1588, 2031, 2123, 3227, 4028
BseRI GAGGAG 3 cut(s) 2835, 3705, 4214
BseSI GKGCMC 1 cut(s) 1651
BseXI GCAGC 7 cut(s) 538, 1159, 1518, 2455, 2752, 3919, 4210
BseYI CCCAGC 2 cut(s) 731, 3026
BsgI GTGCAG 1 cut(s) 396
Bsh1236I CGCG 1 cut(s) 779
BshNI GGYRCC 4 cut(s) 62, 1646, 2006, 4311
BshTI ACCGGT 1 cut(s) 2614
BshVI ATCGAT 1 cut(s) 3960
BsiHKAI GWGCWC 5 cut(s) 895, 2572, 2827, 3085, 4224
BsiHKCI CYCGRG 1 cut(s) 875
BsiSI CCGG 2 cut(s) 2615, 3940
BslFI GGGAC 2 cut(s) 2086, 2104
BslI CCNNNNNNNGG 9 cut(s) 196, 197, 628, 759, 1318, 2395, 3267, 3761, 3935
BsmAI GTCTC 5 cut(s) 60, 148, 568, 1580, 3216
BsmFI GGGAC 2 cut(s) 2086, 2104
BsmI GAATGC 3 cut(s) 394, 2405, 3521
BsoBI CYCGRG 1 cut(s) 875
Bsp1286I GDGCHC 7 cut(s) 895, 1651, 1761, 2572, 2827, 3085, 4224
Bsp1720I GCTNAGC 2 cut(s) 3583, 4001
Bsp19I CCATGG 3 cut(s) 1313, 1981, 2117
BspACI CCGC 5 cut(s) 779, 1519, 3793, 3823, 3991
BspCNI CTCAG 9 cut(s) 453, 1135, 1267, 1576, 1587, 2030, 2122, 3226, 4027
BspDI ATCGAT 1 cut(s) 3960
BspFNI CGCG 1 cut(s) 779
BspHI TCATGA 1 cut(s) 2487
BspMAI CTGCAG 3 cut(s) 679, 1536, 4159
BspMI ACCTGC 1 cut(s) 2473
BspOI GCTAGC 1 cut(s) 2661
BspPI GGATC 8 cut(s) 115, 1693, 1706, 2345, 2389, 2565, 3560, 3920
BspT107I GGYRCC 4 cut(s) 62, 1646, 2006, 4311
BspTI CTTAAG 1 cut(s) 2078
BsrDI GCAATG 2 cut(s) 3573, 3755
BsrFI RCCGGY 1 cut(s) 2614
BssAI RCCGGY 1 cut(s) 2614
BssECI CCNNGG 5 cut(s) 1313, 1981, 2117, 3844, 4210
BssNAI GTATAC 3 cut(s) 3690, 3701, 4074
BssSI CACGAG 3 cut(s) 1106, 2310, 3297
BssT1I CCWWGG 3 cut(s) 1313, 1981, 2117
Bst1107I GTATAC 3 cut(s) 3690, 3701, 4074
Bst2BI CACGAG 3 cut(s) 1106, 2310, 3297
Bst2UI CCWGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
Bst6I CTCTTC 5 cut(s) 578, 2751, 3056, 3973, 4062
BstAFI CTTAAG 1 cut(s) 2078
BstAPI GCANNNNNTGC 1 cut(s) 3988
BstC8I GCNNGC 9 cut(s) 1416, 1536, 1684, 1688, 1734, 2659, 2729, 3580, 3937
BstDSI CCRYGG 3 cut(s) 1313, 1981, 2117
BstENI CCTNNNNNAGG 2 cut(s) 626, 2393
BstFNI CGCG 1 cut(s) 779
BstHHI GCGC 4 cut(s) 1147, 1732, 2593, 4348
BstMAI GTCTC 5 cut(s) 60, 148, 568, 1580, 3216
BstNI CCWGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
BstNSI RCATGY 8 cut(s) 314, 1306, 1519, 1690, 2205, 3616, 3811, 3837
BstSCI CCNGG 8 cut(s) 58, 299, 944, 3568, 3749, 3844, 4209, 4242
BstSFI CTRYAG 8 cut(s) 226, 675, 1532, 1765, 3118, 3683, 4155, 4281
BstSLI GKGCMC 1 cut(s) 1651
BstUI CGCG 1 cut(s) 779
BstV1I GCAGC 7 cut(s) 538, 1159, 1518, 2455, 2752, 3919, 4210
BstV2I GAAGAC 4 cut(s) 816, 1586, 1630, 1763
BstX2I RGATCY 5 cut(s) 1698, 1719, 2381, 2557, 3005
BstXI CCANNNNNNTGG 1 cut(s) 1241
BstYI RGATCY 5 cut(s) 1698, 1719, 2381, 2557, 3005
BstZ17I GTATAC 3 cut(s) 3690, 3701, 4074
Bsu15I ATCGAT 1 cut(s) 3960
Bsu36I CCTNAGG 2 cut(s) 1574, 4014
BsuI GTATCC 2 cut(s) 1819, 2115
BsuTUI ATCGAT 1 cut(s) 3960
BtgI CCRYGG 3 cut(s) 1313, 1981, 2117
BtgZI GCGATG 1 cut(s) 3485
BtrI CACGTC 1 cut(s) 1052
BtsI GCAGTG 6 cut(s) 672, 1235, 3139, 3210, 3889, 4164
BveI ACCTGC 1 cut(s) 2473
Cac8I GCNNGC 9 cut(s) 1416, 1536, 1684, 1688, 1734, 2659, 2729, 3580, 3937
CaiI CAGNNNCTG 1 cut(s) 2546
CciI TCATGA 1 cut(s) 2487
CfoI GCGC 4 cut(s) 1147, 1732, 2593, 4348
Cfr10I RCCGGY 1 cut(s) 2614
ClaI ATCGAT 1 cut(s) 3960
CspAI ACCGGT 1 cut(s) 2614
CspCI CAANNNNNGTGG 4 cut(s) 2260, 2295, 3801, 3836
DrdI GACNNNNNNGTC 1 cut(s) 4331
DseDI GACNNNNNNGTC 1 cut(s) 4331
EaeI YGGCCR 4 cut(s) 1620, 3446, 3752, 3937
Eam1104I CTCTTC 5 cut(s) 578, 2751, 3056, 3973, 4062
EarI CTCTTC 5 cut(s) 578, 2751, 3056, 3973, 4062
Ecl136II GAGCTC 1 cut(s) 2825
Eco130I CCWWGG 3 cut(s) 1313, 1981, 2117
Eco147I AGGCCT 1 cut(s) 2099
Eco24I GRGCYC 2 cut(s) 1761, 2827
Eco32I GATATC 3 cut(s) 2067, 2335, 3964
Eco47I GGWCC 6 cut(s) 849, 2218, 2410, 2612, 4018, 4057
Eco53kI GAGCTC 1 cut(s) 2825
Eco57I CTGAAG 3 cut(s) 342, 3276, 3770
Eco81I CCTNAGG 2 cut(s) 1574, 4014
Eco88I CYCGRG 1 cut(s) 875
EcoICRI GAGCTC 1 cut(s) 2825
EcoNI CCTNNNNNAGG 2 cut(s) 626, 2393
EcoO109I RGGNCCY 5 cut(s) 187, 849, 2218, 3163, 4018
EcoRI GAATTC 2 cut(s) 1746, 4492
EcoRII CCWGG 8 cut(s) 58, 299, 944, 3568, 3749, 3844, 4209, 4242
EcoRV GATATC 3 cut(s) 2067, 2335, 3964
EcoT14I CCWWGG 3 cut(s) 1313, 1981, 2117
EcoT22I ATGCAT 1 cut(s) 1308
EcoT38I GRGCYC 2 cut(s) 1761, 2827
ErhI CCWWGG 3 cut(s) 1313, 1981, 2117
FalI AAGNNNNNCTT 6 cut(s) 2387, 2419, 2727, 2759, 4131, 4163
FaqI GGGAC 2 cut(s) 2086, 2104
FauI CCCGC 1 cut(s) 3816
FauNDI CATATG 2 cut(s) 2815, 3595
FbaI TGATCA 2 cut(s) 2242, 3742
FblI GTMKAC 4 cut(s) 2685, 3689, 3700, 4073
Fnu4HI GCNGC 7 cut(s) 552, 1148, 1532, 2469, 2741, 3933, 4199
FriOI GRGCYC 2 cut(s) 1761, 2827
Fsp4HI GCNGC 7 cut(s) 552, 1148, 1532, 2469, 2741, 3933, 4199
FspI TGCGCA 1 cut(s) 4347
GlaI GCGC 4 cut(s) 1146, 1731, 2592, 4347
GluI GCNGC 7 cut(s) 552, 1148, 1532, 2469, 2741, 3933, 4199
GsaI CCCAGC 2 cut(s) 735, 3030
GsuI CTGGAG 4 cut(s) 42, 967, 3867, 4201
HapII CCGG 2 cut(s) 2615, 3940
HhaI GCGC 4 cut(s) 1147, 1732, 2593, 4348
Hin6I GCGC 4 cut(s) 1145, 1730, 2591, 4346
HinP1I GCGC 4 cut(s) 1145, 1730, 2591, 4346
HincII GTYRAC 2 cut(s) 3372, 3894
HindII GTYRAC 2 cut(s) 3372, 3894
HindIII AAGCTT 5 cut(s) 2029, 2580, 3112, 3621, 4145
HpaII CCGG 2 cut(s) 2615, 3940
Hpy99I CGWCG 1 cut(s) 1053
HpyCH4IV ACGT 3 cut(s) 516, 813, 1051
HpySE526I ACGT 3 cut(s) 516, 813, 1051
HspAI GCGC 4 cut(s) 1145, 1730, 2591, 4346
KpnI GGTACC 2 cut(s) 66, 2010
Ksp22I TGATCA 2 cut(s) 2242, 3742
Lsp1109I GCAGC 7 cut(s) 538, 1159, 1518, 2455, 2752, 3919, 4210
MaeII ACGT 3 cut(s) 516, 813, 1051
MfeI CAATTG 1 cut(s) 1899
MflI RGATCY 5 cut(s) 1698, 1719, 2381, 2557, 3005
MhlI GDGCHC 7 cut(s) 895, 1651, 1761, 2572, 2827, 3085, 4224
MlsI TGGCCA 1 cut(s) 3754
MluNI TGGCCA 1 cut(s) 3754
MlyI GAGTC 4 cut(s) 775, 887, 1478, 2068
MmeI TCCRAC 3 cut(s) 861, 2959, 3298
Mox20I TGGCCA 1 cut(s) 3754
Mph1103I ATGCAT 1 cut(s) 1308
MroXI GAANNNNTTC 3 cut(s) 161, 813, 4357
MscI TGGCCA 1 cut(s) 3754
MslI CAYNNNNRTG 3 cut(s) 1028, 1239, 1658
Msp20I TGGCCA 1 cut(s) 3754
MspA1I CMGCKG 3 cut(s) 3026, 3464, 4201
MspCI CTTAAG 1 cut(s) 2078
MspI CCGG 2 cut(s) 2615, 3940
MspR9I CCNGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
MunI CAATTG 1 cut(s) 1899
Mva1269I GAATGC 3 cut(s) 394, 2405, 3521
MvaI CCWGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
MvnI CGCG 1 cut(s) 779
NcoI CCATGG 3 cut(s) 1313, 1981, 2117
NdeI CATATG 2 cut(s) 2815, 3595
NheI GCTAGC 1 cut(s) 2657
NmeAIII GCCGAG 1 cut(s) 920
NmuCI GTSAC 7 cut(s) 334, 904, 1286, 1669, 2112, 3589, 4373
NsbI TGCGCA 1 cut(s) 4347
NsiI ATGCAT 1 cut(s) 1308
NspI RCATGY 8 cut(s) 314, 1306, 1519, 1690, 2205, 3616, 3811, 3837
OliI CACNNNNGTG 3 cut(s) 1028, 1239, 1658
PaeI GCATGC 1 cut(s) 1690
PaeR7I CTCGAG 1 cut(s) 875
PagI TCATGA 1 cut(s) 2487
PceI AGGCCT 1 cut(s) 2099
PciI ACATGT 2 cut(s) 310, 3612
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PctI GAATGC 3 cut(s) 394, 2405, 3521
PdmI GAANNNNTTC 3 cut(s) 161, 813, 4357
PflFI GACNNNGTC 1 cut(s) 1210
PinAI ACCGGT 1 cut(s) 2614
PkrI GCNGC 7 cut(s) 553, 1149, 1533, 2470, 2742, 3934, 4200
PleI GAGTC 4 cut(s) 774, 886, 1477, 2068
PpsI GAGTC 4 cut(s) 774, 886, 1477, 2068
PpuMI RGGWCCY 3 cut(s) 849, 2218, 4018
PscI ACATGT 2 cut(s) 310, 3612
PshBI ATTAAT 1 cut(s) 932
PsiI TTATAA 1 cut(s) 2954
Psp124BI GAGCTC 1 cut(s) 2827
Psp5II RGGWCCY 3 cut(s) 849, 2218, 4018
Psp6I CCWGG 8 cut(s) 58, 299, 944, 3568, 3749, 3844, 4209, 4242
PspFI CCCAGC 2 cut(s) 731, 3026
PspGI CCWGG 8 cut(s) 58, 299, 944, 3568, 3749, 3844, 4209, 4242
PspPPI RGGWCCY 3 cut(s) 849, 2218, 4018
PspXI VCTCGAGB 1 cut(s) 875
PstI CTGCAG 3 cut(s) 679, 1536, 4159
PstNI CAGNNNCTG 1 cut(s) 2546
PsuI RGATCY 5 cut(s) 1698, 1719, 2381, 2557, 3005
PsyI GACNNNGTC 1 cut(s) 1210
PvuII CAGCTG 3 cut(s) 3026, 3464, 4201
RseI CAYNNNNRTG 3 cut(s) 1028, 1239, 1658
SacI GAGCTC 1 cut(s) 2827
SatI GCNGC 7 cut(s) 552, 1148, 1532, 2469, 2741, 3933, 4199
SchI GAGTC 4 cut(s) 775, 887, 1478, 2068
ScrFI CCNGG 8 cut(s) 60, 301, 946, 3570, 3751, 3846, 4211, 4244
SduI GDGCHC 7 cut(s) 895, 1651, 1761, 2572, 2827, 3085, 4224
SfcI CTRYAG 8 cut(s) 226, 675, 1532, 1765, 3118, 3683, 4155, 4281
Sfr274I CTCGAG 1 cut(s) 875
SinI GGWCC 6 cut(s) 849, 2218, 2410, 2612, 4018, 4057
SlaI CTCGAG 1 cut(s) 875
SmiMI CAYNNNNRTG 3 cut(s) 1028, 1239, 1658
SmlI CTYRAG 7 cut(s) 626, 875, 1526, 2078, 2416, 2508, 4226
SmoI CTYRAG 7 cut(s) 626, 875, 1526, 2078, 2416, 2508, 4226
SpeI ACTAGT 2 cut(s) 1238, 3695
SphI GCATGC 1 cut(s) 1690
SseBI AGGCCT 1 cut(s) 2099
SsiI CCGC 5 cut(s) 779, 1519, 3793, 3823, 3991
SspI AATATT 2 cut(s) 1908, 3281
SstI GAGCTC 1 cut(s) 2827
StuI AGGCCT 1 cut(s) 2099
StyD4I CCNGG 8 cut(s) 58, 299, 944, 3568, 3749, 3844, 4209, 4242
StyI CCWWGG 3 cut(s) 1313, 1981, 2117
TaiI ACGT 3 cut(s) 519, 816, 1054
TaqI TCGA 8 cut(s) 602, 876, 1020, 3099, 3924, 3960, 4351, 4490
TatI WGTACW 5 cut(s) 222, 1174, 2790, 4328, 4476
TseFI GTSAC 7 cut(s) 334, 904, 1286, 1669, 2112, 3589, 4373
TseI GCWGC 7 cut(s) 551, 1147, 1531, 2468, 2740, 3932, 4198
Tsp45I GTSAC 7 cut(s) 334, 904, 1286, 1669, 2112, 3589, 4373
TspGWI ACGGA 3 cut(s) 420, 2511, 3068
Tth111I GACNNNGTC 1 cut(s) 1210
Vha464I CTTAAG 1 cut(s) 2078
VpaK11BI GGWCC 6 cut(s) 849, 2218, 2410, 2612, 4018, 4057
VspI ATTAAT 1 cut(s) 932
XagI CCTNNNNNAGG 2 cut(s) 626, 2393
XapI RAATTY 6 cut(s) 161, 1746, 1918, 2226, 4086, 4492
XbaI TCTAGA 1 cut(s) 3401
XceI RCATGY 8 cut(s) 314, 1306, 1519, 1690, 2205, 3616, 3811, 3837
XcmI CCANNNNNNNNNTGG 1 cut(s) 916
XhoI CTCGAG 1 cut(s) 875
XmiI GTMKAC 4 cut(s) 2685, 3689, 3700, 4073
XmnI GAANNNNTTC 3 cut(s) 161, 813, 4357
Zsp2I ATGCAT 1 cut(s) 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.