Rorug04G0074200

Uncharacterized conserved protein (DUF2054)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000680
Physical Location & Seq
Reverse (-)
11510554 .. 11519611
9058 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0074200.1

Sequence Viewer

Length: 2775 bp
ATGGGGAAGATGAGCCCATCATCTAGTCGGCGGCATGAAAAGAAAGTGCATGACCACGACGAAGAAAGTGCTGCTAGGACGAGGCCTTTCGGCTATGAAGAGATTATGCTTAGGAGGAAGGATAAGAAGTTGTGTGATAATGTTGTGGTGGAAGCGGTTGATTTAGGGGATGTACCGGGGGAAGGTAGTACCGAAAATGTTTCAGAGGCTTTTGAATCCAAAAGGGGTGAGAGACGGCATAAAGATTTGGCCCCTGTTGTTGAAAAGCCTTTGTTGGAGGAGCGACTGAAGGAAAGCTCCAGAAAGAAAGAAACGGATAGTTCTAAGAGTACTAAAATAGAAGACGATGTTGTTAAAGGGAAAGTTAGAAGAAGCAATGAGTCGGAGAGCGTGAAGGATAAGCCAAAAAAAGATACAAGAAGTGAAGCTAGAGGAGACAAAACTGACAAACAAGTACATGGTAGGAGGAAAATTGAGGACTCAATTGATGAGTCTGTAAAGAAGCAGTCAAGAGATTATTCAACAAGAAAAGAAAGACACTTGGACCAAAATAGAGGGGAACATGAAAGAGAAACCAAGAGAAAATACCAACACGAAAATGATGACAAAATCAGAGACAGAAGTGCTGCAAAGAAACATGATTCAGGAAAGCTTCGTTCTTTAGAAATTTCAGAGAGAAAGGAGAGGACAGAATCATCAAAATCACGCTTTGAAGAATCAAGACGCAAAAGGGGAAGATCGAGGAGTAGAGACCGCGTGGATAGACATAGGTTAAGTTCTCGGTCACCAAGGGCACACAAACATACATTAAATAATTTGGGGCCTCGCAGCGATATATCATCATATTCTCCCAAAGATAGGTCTGGAAGACAGCATTTGGATATTGATAGTAGCAGAGTGTCTACTAATGGCTCAAGCAGCCACTATCAGCGACATGGTGAGTCTGCGAATAGACTTGGTGGCTATTCCCCTAGGAAGAGAAGGACTGAGTCTGCTATTAAGACTCCATCCCCACCTGATCATTCACCTGAAAAGAAAAATGCCAGGTGGGATCTCCCTCATGCATCAACTGACAAGGCATTATCTAGTTTGGTTGCTTCTCGTTTTCAGTCATCAAACAGTAATGTATCCTCAAATGTACATGGGATGACCATTGCTGTTGCTGTTGCCTCAACCACCACAACATCTATTCCTGGAGTTTCTCCCAATTCTATATTGACTAAGAAGAATGCTTCCGTTGACTCCGTGCAATTAACACAAGCTACCCGGCGAATGAGGAGGCTTCATGTAGAAAATATTCCATCTACAACCTCTGAAAACACTTTGGTAGAATCTCTTAATAAATTTTTGTTGTCTTCAGGCGTAAATCATATTCAAGGAACACAACCCTGCATCAGTTGTGTGATTAACAAAGAGAAGGGGCAAGCTCTTGTGGAGTTTCTTACACCTCAAGATGCTTTGGCTGCTTTGTCATTTGATGGCAGTTCATTCTTTGGTTCTATTCTCAAAATCAGGCGCCCTAAGGACTTTGTTGACGTTGCTACTGGTGACCCCGAGAAATCAGTGGCTGCAGCTGAGAGTATTGAGACAATAAGTGATGTTGTGAACGATTCTCCTAACAAGATTTTCATTGGTGGGATATCAAAGGCTCTTTCCTCAGAAATGCTTCTGGAAATCGTTAGTGTCTTTGGACCTTTGAAGGCATACCATTTTGAGGCCAATGAGGAACTTAATGAAGCATGTGCTTTTCTAGAGTATGTCGACCAGTCAGTTACTCTCAAAGCTTGTGCGGGTCTGAATGGTATAAAATTAGGAGGGAGAGTGCTAACTGTGGTTCAGGCAATTCATAGTGGATCATCCATGGTAAATAGTGGAAATGCATCACTCTATGAGATCCCAGAACATGCAAAGCCGCTTCTCAAACAACCTTCACATATCCTGAAGCTTAGAAATGTGTTCAATCTGGAGCACATGTCATCACTGTCTGAACAAGAGATTGAAGAAGTTCTGGAAGATGTGCGATTAGAATGTGCCAGGTTTGGCTTGGTTAAATCTGTAAAGATTGTCAAGCATGCAAACAATCACATTGTCACCACTAGAGCGTGTGAAGCTGTCAATGATGCAGAATCTGGTGGGCACTGGCAAAATTTATGTTCTGAAGAAAAAGCAGCAAAAACAGAGACTTTGGACGAACATATTGATAATGACGGCAAGGAAACGAGTGGAGTGAAGCTTACAGGGGAGCTTAAAGAAGATGAAGTCCCAGAAAGTAATTGCTTTGGTTATGATAAACCAGCAGGTGATTTTGTAGAGGACAAGTCATGTCAAATGGGCCAACCAGATAAAGATATTGAAGTCCAAGGAAGCAATGACTTACCTAATAGGGATCCCGAAGAACTCACCAACCTGCCAAACAGCATGAAAGATGCGTCAGAGTGTTATGATGATAAAACTCCTGAAGTTACAACAGTAGAGAGTTCTATTATAGAGGAAGTTGATGGTAAGAAACAACAGACTTTTGCTGGAACAGATGACAATGTGGGAACAGAAACAGACTCTATTCTGGAGAGTGGAACTAAGGAGCAGCATAATGGGAAGGATAATGATTTTGATCTTGGAAGCATATTCGAGCCTGGGTGTGTCTTTGTGGAGTTTGGGAGATCAGAAGCCTCTTGGATGGCAGCACATTGTTTACATGGACGAGTTTTTGAGGATCGGATTGTGACAGTGGAGTATATCGCACCTGATCATTACAGGGCTAAATTTTTAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2054 Glyco_transf_18

Protein Analysis

924

Amino Acids

102.96

Weight (kDa)

6.41

Isoelectric Point (pI)

60.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 542 - 609 4e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2288
Acc36I ACCTGC 2 cut(s) 2288, 2415
AccB1I GGYRCC 1 cut(s) 1515
AccI GTMKAC 2 cut(s) 902, 1761
AccII CGCG 1 cut(s) 756
AciI CCGC 5 cut(s) 31, 155, 754, 1790, 1913
AclWI GGATC 6 cut(s) 1059, 1861, 1888, 2381, 2394, 2721
AcsI RAATTY 4 cut(s) 666, 1343, 2146, 2762
AcuI CTGAAG 5 cut(s) 308, 1341, 1961, 2178, 2478
AcyI GRCGYC 1 cut(s) 1516
AfaI GTAC 5 cut(s) 174, 190, 331, 456, 1140
AfiI CCNNNNNNNGG 3 cut(s) 182, 858, 1714
AflIII ACRYGT 1 cut(s) 1971
AgsI TTSAA 9 cut(s) 215, 263, 522, 713, 1376, 1699, 1960, 2000, 2354
AjnI CCWGG 4 cut(s) 1043, 1192, 2033, 2632
Alw21I GWGCWC 1 cut(s) 1971
Alw26I GTCTC 6 cut(s) 226, 429, 609, 744, 1580, 2174
AlwI GGATC 6 cut(s) 1059, 1861, 1888, 2381, 2394, 2721
AlwNI CAGNNNCTG 2 cut(s) 1568, 2129
Ama87I CYCGRG 1 cut(s) 1553
AoxI GGCC 5 cut(s) 83, 249, 821, 1716, 2332
ApoI RAATTY 4 cut(s) 666, 1343, 2146, 2762
Asp700I GAANNNNTTC 3 cut(s) 1296, 1665, 2004
AspA2I CCTAGG 1 cut(s) 971
AspLEI GCGC 1 cut(s) 1518
AspS9I GGNCC 5 cut(s) 250, 544, 821, 1691, 2332
AsuC2I CCSGG 2 cut(s) 177, 1267
AsuHPI GGTGA 8 cut(s) 239, 777, 950, 1017, 1559, 2083, 2312, 2392
AvaI CYCGRG 1 cut(s) 1553
AvaII GGWCC 2 cut(s) 544, 1691
AvrII CCTAGG 1 cut(s) 971
AxyI CCTNAGG 1 cut(s) 1521
BaeGI GKGCMC 2 cut(s) 796, 2139
BamHI GGATCC 1 cut(s) 2386
BanI GGYRCC 1 cut(s) 1515
BanII GRGCYC 1 cut(s) 17
BbsI GAAGAC 3 cut(s) 348, 874, 1347
Bbv12I GWGCWC 1 cut(s) 1971
BccI CCATC 6 cut(s) 25, 1015, 1309, 1472, 2492, 2671
BceAI ACGGC 2 cut(s) 251, 2224
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BciT130I CCWGG 4 cut(s) 1045, 1194, 2035, 2634
BciVI GTATCC 1 cut(s) 1138
BclI TGATCA 2 cut(s) 1018, 2746
BcnI CCSGG 2 cut(s) 177, 1267
BcoDI GTCTC 6 cut(s) 226, 429, 609, 744, 1580, 2174
BfaI CTAG 7 cut(s) 24, 75, 429, 972, 1086, 1751, 2097
BfmI CTRYAG 1 cut(s) 1569
BfoI RGCGCY 1 cut(s) 1519
BfuAI ACCTGC 2 cut(s) 2288, 2415
BfuI GTATCC 1 cut(s) 1138
BlnI CCTAGG 1 cut(s) 971
BmcAI AGTACT 1 cut(s) 331
Bme1390I CCNGG 6 cut(s) 177, 1045, 1194, 1267, 2035, 2634
Bme18I GGWCC 2 cut(s) 544, 1691
BmeT110I CYCGRG 1 cut(s) 1553
BmgT120I GGNCC 5 cut(s) 250, 544, 821, 1691, 2332
BmiI GGNNCC 4 cut(s) 252, 822, 1517, 2388
BmrFI CCNGG 6 cut(s) 177, 1045, 1194, 1267, 2035, 2634
BmsI GCATC 6 cut(s) 1073, 1401, 1444, 1889, 2110, 2416
BpiI GAAGAC 3 cut(s) 348, 874, 1347
BpmI CTGGAG 4 cut(s) 283, 1215, 1985, 2585
Bpu10I CCTNAGC 1 cut(s) 110
BpuEI CTTGAG 2 cut(s) 898, 1434
BpuMI CCSGG 2 cut(s) 177, 1267
BsaBI GATNNNNATC 1 cut(s) 2610
BsaHI GRCGYC 1 cut(s) 1516
BsaI GGTCTC 1 cut(s) 744
BsaJI CCNNGG 6 cut(s) 176, 788, 971, 1860, 2359, 2633
BsaXI ACNNNNNCTCC 4 cut(s) 1806, 1836, 1958, 1988
Bsc4I CCNNNNNNNGG 3 cut(s) 182, 858, 1714
Bse1I ACTGG 3 cut(s) 1549, 1765, 2144
Bse21I CCTNAGG 1 cut(s) 1521
Bse3DI GCAATG 3 cut(s) 382, 1152, 2374
Bse8I GATNNNNATC 1 cut(s) 2610
BseBI CCWGG 4 cut(s) 1045, 1194, 2035, 2634
BseDI CCNNGG 6 cut(s) 176, 788, 971, 1860, 2359, 2633
BseGI GGATG 5 cut(s) 175, 1007, 1152, 1856, 2682
BseJI GATNNNNATC 1 cut(s) 2610
BseLI CCNNNNNNNGG 3 cut(s) 182, 858, 1714
BseMI GCAATG 3 cut(s) 382, 1152, 2374
BseMII CTCAG 3 cut(s) 978, 1566, 1671
BseNI ACTGG 3 cut(s) 1549, 1765, 2144
BseRI GAGGAG 4 cut(s) 293, 447, 757, 1291
BseSI GKGCMC 2 cut(s) 796, 2139
Bsh1236I CGCG 1 cut(s) 756
BshFI GGCC 5 cut(s) 85, 251, 823, 1718, 2334
BshNI GGYRCC 1 cut(s) 1515
BsiHKAI GWGCWC 1 cut(s) 1971
BsiHKCI CYCGRG 1 cut(s) 1553
BsiSI CCGG 2 cut(s) 176, 1267
BslFI GGGAC 1 cut(s) 2246
BslI CCNNNNNNNGG 3 cut(s) 182, 858, 1714
BsmAI GTCTC 6 cut(s) 226, 429, 609, 744, 1580, 2174
BsmBI CGTCTC 1 cut(s) 226
BsmFI GGGAC 1 cut(s) 2246
BsmI GAATGC 1 cut(s) 1234
BsnI GGCC 5 cut(s) 85, 251, 823, 1718, 2334
Bso31I GGTCTC 1 cut(s) 744
BsoBI CYCGRG 1 cut(s) 1553
Bsp1286I GDGCHC 4 cut(s) 17, 796, 1971, 2139
Bsp1407I TGTACA 1 cut(s) 1138
Bsp19I CCATGG 1 cut(s) 1860
BspACI CCGC 5 cut(s) 31, 155, 754, 1790, 1913
BspANI GGCC 5 cut(s) 85, 251, 823, 1718, 2334
BspCNI CTCAG 3 cut(s) 979, 1567, 1670
BspFNI CGCG 1 cut(s) 756
BspLI GGNNCC 4 cut(s) 252, 822, 1517, 2388
BspMAI CTGCAG 1 cut(s) 1573
BspMI ACCTGC 2 cut(s) 2288, 2415
BspPI GGATC 6 cut(s) 1059, 1861, 1888, 2381, 2394, 2721
BspT107I GGYRCC 1 cut(s) 1515
BspTNI GGTCTC 1 cut(s) 744
BsrDI GCAATG 3 cut(s) 382, 1152, 2374
BsrGI TGTACA 1 cut(s) 1138
BsrI ACTGG 3 cut(s) 1549, 1765, 2144
BssECI CCNNGG 6 cut(s) 176, 788, 971, 1860, 2359, 2633
BssNI GRCGYC 1 cut(s) 1516
BssT1I CCWWGG 4 cut(s) 788, 971, 1860, 2359
Bst2UI CCWGG 4 cut(s) 1045, 1194, 2035, 2634
Bst4CI ACNGT 5 cut(s) 1121, 1831, 1983, 2470, 2728
Bst6I CTCTTC 2 cut(s) 93, 971
BstACI GRCGYC 1 cut(s) 1516
BstAUI TGTACA 1 cut(s) 1138
BstC8I GCNNGC 2 cut(s) 1425, 2073
BstDEI CTNAG 9 cut(s) 110, 324, 987, 1221, 1521, 1575, 1657, 1946, 2577
BstDSI CCRYGG 1 cut(s) 1860
BstEII GGTNACC 2 cut(s) 783, 1547
BstF5I GGATG 5 cut(s) 175, 1007, 1152, 1856, 2682
BstFNI CGCG 1 cut(s) 756
BstH2I RGCGCY 1 cut(s) 1519
BstHHI GCGC 1 cut(s) 1518
BstMAI GTCTC 6 cut(s) 226, 429, 609, 744, 1580, 2174
BstMWI GCNNNNNNNGC 3 cut(s) 918, 1463, 2108
BstNI CCWGG 4 cut(s) 1045, 1194, 2035, 2634
BstNSI RCATGY 4 cut(s) 1743, 1907, 1975, 2075
BstPI GGTNACC 2 cut(s) 783, 1547
BstSCI CCNGG 6 cut(s) 175, 1043, 1192, 1265, 2033, 2632
BstSFI CTRYAG 1 cut(s) 1569
BstSLI GKGCMC 2 cut(s) 796, 2139
BstUI CGCG 1 cut(s) 756
BstV2I GAAGAC 3 cut(s) 348, 874, 1347
BstX2I RGATCY 3 cut(s) 1051, 1893, 2386
BstYI RGATCY 3 cut(s) 1051, 1893, 2386
Bsu36I CCTNAGG 1 cut(s) 1521
BsuI GTATCC 1 cut(s) 1138
BsuRI GGCC 5 cut(s) 85, 251, 823, 1718, 2334
BtgI CCRYGG 1 cut(s) 1860
BtsCI GGATG 5 cut(s) 175, 1007, 1152, 1856, 2682
BtsIMutI CAGTG 4 cut(s) 1569, 1979, 2137, 2733
BveI ACCTGC 2 cut(s) 2288, 2415
Cac8I GCNNGC 2 cut(s) 1425, 2073
CaiI CAGNNNCTG 2 cut(s) 1568, 2129
CfoI GCGC 1 cut(s) 1518
Cfr13I GGNCC 5 cut(s) 250, 544, 821, 1691, 2332
CseI GACGC 2 cut(s) 732, 2418
Csp6I GTAC 5 cut(s) 173, 189, 330, 455, 1139
CviQI GTAC 5 cut(s) 173, 189, 330, 455, 1139
DdeI CTNAG 9 cut(s) 110, 324, 987, 1221, 1521, 1575, 1657, 1946, 2577
DinI GGCGCC 1 cut(s) 1517
DraI TTTAAA 1 cut(s) 2769
Eam1104I CTCTTC 2 cut(s) 93, 971
EarI CTCTTC 2 cut(s) 93, 971
Eco130I CCWWGG 4 cut(s) 788, 971, 1860, 2359
Eco147I AGGCCT 1 cut(s) 85
Eco24I GRGCYC 1 cut(s) 17
Eco31I GGTCTC 1 cut(s) 744
Eco32I GATATC 1 cut(s) 1641
Eco47I GGWCC 2 cut(s) 544, 1691
Eco57I CTGAAG 5 cut(s) 308, 1341, 1961, 2178, 2478
Eco81I CCTNAGG 1 cut(s) 1521
Eco88I CYCGRG 1 cut(s) 1553
Eco91I GGTNACC 2 cut(s) 783, 1547
EcoO109I RGGNCCY 1 cut(s) 821
EcoO65I GGTNACC 2 cut(s) 783, 1547
EcoRII CCWGG 4 cut(s) 1043, 1192, 2033, 2632
EcoRV GATATC 1 cut(s) 1641
EcoT14I CCWWGG 4 cut(s) 788, 971, 1860, 2359
EcoT22I ATGCAT 2 cut(s) 1066, 1882
EcoT38I GRGCYC 1 cut(s) 17
EgeI GGCGCC 1 cut(s) 1517
EheI GGCGCC 1 cut(s) 1517
ErhI CCWWGG 4 cut(s) 788, 971, 1860, 2359
Esp3I CGTCTC 1 cut(s) 226
FaqI GGGAC 1 cut(s) 2246
FauI CCCGC 1 cut(s) 1783
FbaI TGATCA 2 cut(s) 1018, 2746
FblI GTMKAC 2 cut(s) 902, 1761
FokI GGATG 5 cut(s) 182, 994, 1159, 1843, 2689
FriOI GRGCYC 1 cut(s) 17
FspBI CTAG 7 cut(s) 24, 75, 429, 972, 1086, 1751, 2097
GlaI GCGC 1 cut(s) 1517
GsuI CTGGAG 4 cut(s) 283, 1215, 1985, 2585
HaeII RGCGCY 1 cut(s) 1519
HaeIII GGCC 5 cut(s) 85, 251, 823, 1718, 2334
HapII CCGG 2 cut(s) 176, 1267
HgaI GACGC 2 cut(s) 732, 2418
HhaI GCGC 1 cut(s) 1518
Hin1I GRCGYC 1 cut(s) 1516
Hin6I GCGC 1 cut(s) 1516
HinP1I GCGC 1 cut(s) 1516
HincII GTYRAC 3 cut(s) 1240, 1534, 1762
HindII GTYRAC 3 cut(s) 1240, 1534, 1762
HindIII AAGCTT 4 cut(s) 650, 1782, 1943, 2231
HpaII CCGG 2 cut(s) 176, 1267
HphI GGTGA 8 cut(s) 239, 777, 950, 1017, 1559, 2083, 2312, 2392
Hpy166II GTNNAC 6 cut(s) 903, 1240, 1534, 1606, 1762, 2693
Hpy8I GTNNAC 6 cut(s) 903, 1240, 1534, 1606, 1762, 2693
Hpy99I CGWCG 1 cut(s) 62
HpyAV CCTTC 9 cut(s) 112, 176, 283, 388, 975, 1411, 1693, 1938, 2590
HpyCH4III ACNGT 5 cut(s) 1121, 1831, 1983, 2470, 2728
HpyCH4IV ACGT 1 cut(s) 1536
HpyF10VI GCNNNNNNNGC 3 cut(s) 918, 1463, 2108
HpyF3I CTNAG 9 cut(s) 110, 324, 987, 1221, 1521, 1575, 1657, 1946, 2577
HpySE526I ACGT 1 cut(s) 1536
Hsp92I GRCGYC 1 cut(s) 1516
HspAI GCGC 1 cut(s) 1516
KasI GGCGCC 1 cut(s) 1515
Ksp22I TGATCA 2 cut(s) 1018, 2746
LmnI GCTCC 5 cut(s) 280, 302, 1966, 2242, 2581
LweI GCATC 6 cut(s) 1073, 1401, 1444, 1889, 2110, 2416
MaeI CTAG 7 cut(s) 24, 75, 429, 972, 1086, 1751, 2097
MaeII ACGT 1 cut(s) 1536
MaeIII GTNAC 6 cut(s) 783, 1547, 1771, 2089, 2461, 2722
MfeI CAATTG 1 cut(s) 483
MflI RGATCY 3 cut(s) 1051, 1893, 2386
MhlI GDGCHC 4 cut(s) 17, 796, 1971, 2139
Mly113I GGCGCC 1 cut(s) 1516
MlyI GAGTC 8 cut(s) 389, 473, 500, 950, 997, 998, 1235, 2549
MmeI TCCRAC 2 cut(s) 255, 363
Mph1103I ATGCAT 2 cut(s) 1066, 1882
MroXI GAANNNNTTC 3 cut(s) 1296, 1665, 2004
MslI CAYNNNNRTG 1 cut(s) 597
MspA1I CMGCKG 1 cut(s) 1574
MspI CCGG 2 cut(s) 176, 1267
MspR9I CCNGG 6 cut(s) 177, 1045, 1194, 1267, 2035, 2634
MunI CAATTG 1 cut(s) 483
Mva1269I GAATGC 1 cut(s) 1234
MvaI CCWGG 4 cut(s) 1045, 1194, 2035, 2634
MvnI CGCG 1 cut(s) 756
MwoI GCNNNNNNNGC 3 cut(s) 918, 1463, 2108
NarI GGCGCC 1 cut(s) 1516
NciI CCSGG 2 cut(s) 177, 1267
NcoI CCATGG 1 cut(s) 1860
NlaIV GGNNCC 4 cut(s) 252, 822, 1517, 2388
NmuCI GTSAC 4 cut(s) 783, 1547, 2089, 2722
NsiI ATGCAT 2 cut(s) 1066, 1882
NspI RCATGY 4 cut(s) 1743, 1907, 1975, 2075
PaeI GCATGC 1 cut(s) 2075
PaqCI CACCTGC 1 cut(s) 2288
PceI AGGCCT 1 cut(s) 85
PciI ACATGT 1 cut(s) 1971
PctI GAATGC 1 cut(s) 1234
PdmI GAANNNNTTC 3 cut(s) 1296, 1665, 2004
PfeI GAWTC 7 cut(s) 215, 641, 692, 716, 1331, 1610, 2126
PflFI GACNNNGTC 1 cut(s) 988
PfoI TCCNGGA 1 cut(s) 1192
PleI GAGTC 8 cut(s) 388, 473, 499, 949, 997, 997, 1235, 2549
PluTI GGCGCC 1 cut(s) 1519
PpsI GAGTC 8 cut(s) 388, 473, 499, 949, 997, 997, 1235, 2549
PscI ACATGT 1 cut(s) 1971
Psp6I CCWGG 4 cut(s) 1043, 1192, 2033, 2632
PspEI GGTNACC 2 cut(s) 783, 1547
PspGI CCWGG 4 cut(s) 1043, 1192, 2033, 2632
PspN4I GGNNCC 4 cut(s) 252, 822, 1517, 2388
PspPI GGNCC 5 cut(s) 250, 544, 821, 1691, 2332
PstI CTGCAG 1 cut(s) 1573
PstNI CAGNNNCTG 2 cut(s) 1568, 2129
PsuI RGATCY 3 cut(s) 1051, 1893, 2386
PsyI GACNNNGTC 1 cut(s) 988
PvuII CAGCTG 1 cut(s) 1574
RsaI GTAC 5 cut(s) 174, 190, 331, 456, 1140
RsaNI GTAC 5 cut(s) 173, 189, 330, 455, 1139
RseI CAYNNNNRTG 1 cut(s) 597
SalI GTCGAC 1 cut(s) 1760
Sau96I GGNCC 5 cut(s) 250, 544, 821, 1691, 2332
ScaI AGTACT 1 cut(s) 331
SchI GAGTC 8 cut(s) 389, 473, 500, 950, 997, 998, 1235, 2549
ScrFI CCNGG 6 cut(s) 177, 1045, 1194, 1267, 2035, 2634
SduI GDGCHC 4 cut(s) 17, 796, 1971, 2139
SfaNI GCATC 6 cut(s) 1073, 1401, 1444, 1889, 2110, 2416
SfcI CTRYAG 1 cut(s) 1569
SfoI GGCGCC 1 cut(s) 1517
SinI GGWCC 2 cut(s) 544, 1691
SmiMI CAYNNNNRTG 1 cut(s) 597
SmlI CTYRAG 2 cut(s) 913, 1449
SmoI CTYRAG 2 cut(s) 913, 1449
SphI GCATGC 1 cut(s) 2075
SseBI AGGCCT 1 cut(s) 85
SsiI CCGC 5 cut(s) 31, 155, 754, 1790, 1913
SspDI GGCGCC 1 cut(s) 1515
SspI AATATT 1 cut(s) 1297
SspMI CTAG 7 cut(s) 24, 75, 429, 972, 1086, 1751, 2097
StuI AGGCCT 1 cut(s) 85
StyD4I CCNGG 6 cut(s) 175, 1043, 1192, 1265, 2033, 2632
StyI CCWWGG 4 cut(s) 788, 971, 1860, 2359
TaaI ACNGT 5 cut(s) 1121, 1831, 1983, 2470, 2728
TaiI ACGT 1 cut(s) 1539
TaqI TCGA 3 cut(s) 740, 1761, 2628
TaqII GACCGA 1 cut(s) 771
TatI WGTACW 3 cut(s) 329, 454, 1138
TauI GCSGC 2 cut(s) 34, 1915
TfiI GAWTC 7 cut(s) 215, 641, 692, 716, 1331, 1610, 2126
TscAI CASTG 4 cut(s) 1569, 1986, 2144, 2733
TseFI GTSAC 4 cut(s) 783, 1547, 2089, 2722
Tsp45I GTSAC 4 cut(s) 783, 1547, 2089, 2722
TspGWI ACGGA 3 cut(s) 329, 1225, 1234
TspRI CASTG 4 cut(s) 1569, 1986, 2144, 2733
Tth111I GACNNNGTC 1 cut(s) 988
VpaK11BI GGWCC 2 cut(s) 544, 1691
XapI RAATTY 4 cut(s) 666, 1343, 2146, 2762
XbaI TCTAGA 1 cut(s) 1750
XceI RCATGY 4 cut(s) 1743, 1907, 1975, 2075
XcmI CCANNNNNNNNNTGG 1 cut(s) 2041
XmaJI CCTAGG 1 cut(s) 971
XmiI GTMKAC 2 cut(s) 902, 1761
XmnI GAANNNNTTC 3 cut(s) 1296, 1665, 2004
XspI CTAG 7 cut(s) 24, 75, 429, 972, 1086, 1751, 2097
ZrmI AGTACT 1 cut(s) 331
Zsp2I ATGCAT 2 cut(s) 1066, 1882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.