FvH4_5g03400

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000065
Physical Location & Seq
Forward (+)
2028688 .. 2029401
714 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g03400.t1

Sequence Viewer

Length: 714 bp
ATGTCTGAGAAGTACAATCATACGCAGCAAATCCCGGTCGATCATACGCAGCAAACCCCGGTCCATCATACGCAGCAAACCCCGGTCCATCATACGCAGCAAACTCCGGTTCAGGGGCACCAGAGAACTGGTGAAGATCATTCTACCACTTTCCAGTTCAACGATGAGATAAAGCGCCAGAAGAGAATGAAACTGTACAAATGCATTGGTATTTTAATTGTGTTTCAGATTATAATTCTGACTGTGTTTGCTCTCACGGTGATGAAAGTTAAGACCCCTAAGGTGAGATTGGGCGCCATCAACATTCAAAGTCTCAACTCCGTCCCTGCAACACCTTCTTTTGATGCAAGCTTCACCACCCAAATTAGGGTTAAGAACCCAAACTGGGGTCCCTTTAAGTTTGATGCAAGCACTGCAACATTTTCGTACCAAGGGGTGCCTGTGGGACAAGTTGTTATTCCGAAGAGCAAGGCTAGAATGCGGTCTACCAAGAAGATTGGTGTCACAGTGAGTGTGAATTCCAAAGCATTGCCTAGCAGTTCTGATCTTGGCAGTGAATTGAAGAATGGGGTGTTGACACTGAGTAGCCAAGCCAAGGTGTCTGGAAAGGTGGAAATTATGTCGGTGACCAAGAAAAGGAAGACGGCCCAAATGTACTGCGCTATTGTGTTTGATTTGTCTACAAAGGCAATTCAAACTCTGCAGTGCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

238

Amino Acids

26.34

Weight (kDa)

10.01

Isoelectric Point (pI)

37.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 122 - 214 1.8e-09 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 233
AccB1I GGYRCC 3 cut(s) 117, 293, 436
AccI GTMKAC 2 cut(s) 485, 680
AciI CCGC 1 cut(s) 481
AcsI RAATTY 1 cut(s) 517
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 4 cut(s) 14, 197, 428, 656
AfiI CCNNNNNNNGG 7 cut(s) 113, 366, 367, 385, 386, 595, 636
AgsI TTSAA 4 cut(s) 160, 308, 562, 695
AluBI AGCT 1 cut(s) 351
AluI AGCT 1 cut(s) 351
Alw26I GTCTC 1 cut(s) 317
AoxI GGCC 1 cut(s) 645
ApeKI GCWGC 4 cut(s) 25, 49, 73, 97
ApoI RAATTY 1 cut(s) 517
AspLEI GCGC 3 cut(s) 177, 296, 662
AspS9I GGNCC 4 cut(s) 61, 85, 389, 646
AsuC2I CCSGG 3 cut(s) 35, 59, 83
AsuHPI GGTGA 5 cut(s) 143, 271, 295, 346, 637
AvaII GGWCC 3 cut(s) 61, 85, 389
AxyI CCTNAGG 1 cut(s) 279
BaeGI GKGCMC 1 cut(s) 120
BanI GGYRCC 3 cut(s) 117, 293, 436
BbsI GAAGAC 1 cut(s) 647
BbvI GCAGC 4 cut(s) 37, 61, 85, 109
BccI CCATC 3 cut(s) 72, 96, 305
BceAI ACGGC 1 cut(s) 660
BcgI CGANNNNNNTGC 2 cut(s) 405, 439
BcnI CCSGG 3 cut(s) 35, 59, 83
BcoDI GTCTC 1 cut(s) 317
BfaI CTAG 2 cut(s) 474, 534
BfmI CTRYAG 1 cut(s) 701
BfoI RGCGCY 2 cut(s) 178, 297
BisI GCNGC 4 cut(s) 26, 50, 74, 98
BlsI GCNGC 4 cut(s) 27, 51, 75, 99
Bme1390I CCNGG 3 cut(s) 35, 59, 83
Bme18I GGWCC 3 cut(s) 61, 85, 389
BmgT120I GGNCC 4 cut(s) 61, 85, 389, 646
BmiI GGNNCC 5 cut(s) 119, 295, 390, 391, 438
BmrFI CCNGG 3 cut(s) 35, 59, 83
BmrI ACTGGG 1 cut(s) 394
BmsI GCATC 2 cut(s) 334, 394
BmuI ACTGGG 1 cut(s) 394
BpiI GAAGAC 1 cut(s) 647
BpuMI CCSGG 3 cut(s) 35, 59, 83
BsaHI GRCGYC 1 cut(s) 294
BsaJI CCNNGG 4 cut(s) 57, 81, 430, 594
BsaWI WCCGGW 1 cut(s) 106
Bsc4I CCNNNNNNNGG 7 cut(s) 113, 366, 367, 385, 386, 595, 636
Bse1I ACTGG 3 cut(s) 133, 154, 389
Bse21I CCTNAGG 1 cut(s) 279
Bse3DI GCAATG 1 cut(s) 527
BseDI CCNNGG 4 cut(s) 57, 81, 430, 594
BseLI CCNNNNNNNGG 7 cut(s) 113, 366, 367, 385, 386, 595, 636
BseMI GCAATG 1 cut(s) 527
BseMII CTCAG 1 cut(s) 572
BseNI ACTGG 3 cut(s) 133, 154, 389
BseSI GKGCMC 1 cut(s) 120
BseXI GCAGC 4 cut(s) 37, 61, 85, 109
Bsh1285I CGRYCG 1 cut(s) 39
BshFI GGCC 1 cut(s) 647
BshNI GGYRCC 3 cut(s) 117, 293, 436
BsiEI CGRYCG 1 cut(s) 39
BsiSI CCGG 4 cut(s) 35, 59, 83, 107
BslFI GGGAC 3 cut(s) 308, 375, 459
BslI CCNNNNNNNGG 7 cut(s) 113, 366, 367, 385, 386, 595, 636
BsmAI GTCTC 1 cut(s) 317
BsmFI GGGAC 3 cut(s) 308, 375, 459
BsmI GAATGC 1 cut(s) 483
BsnI GGCC 1 cut(s) 647
Bsp1286I GDGCHC 1 cut(s) 120
Bsp1407I TGTACA 1 cut(s) 195
Bsp143I GATC 3 cut(s) 40, 136, 544
BspACI CCGC 1 cut(s) 481
BspANI GGCC 1 cut(s) 647
BspCNI CTCAG 1 cut(s) 573
BspLI GGNNCC 5 cut(s) 119, 295, 390, 391, 438
BspMAI CTGCAG 1 cut(s) 705
BspQI GCTCTTC 1 cut(s) 458
BspT107I GGYRCC 3 cut(s) 117, 293, 436
BsrDI GCAATG 1 cut(s) 527
BsrGI TGTACA 1 cut(s) 195
BsrI ACTGG 3 cut(s) 133, 154, 389
BssECI CCNNGG 4 cut(s) 57, 81, 430, 594
BssMI GATC 3 cut(s) 40, 136, 544
BssNI GRCGYC 1 cut(s) 294
BssT1I CCWWGG 2 cut(s) 430, 594
Bst4CI ACNGT 4 cut(s) 195, 244, 259, 508
Bst6I CTCTTC 2 cut(s) 176, 458
BstACI GRCGYC 1 cut(s) 294
BstAPI GCANNNNNTGC 1 cut(s) 413
BstAUI TGTACA 1 cut(s) 195
BstC8I GCNNGC 2 cut(s) 349, 409
BstDEI CTNAG 3 cut(s) 6, 279, 581
BstEII GGTNACC 1 cut(s) 625
BstH2I RGCGCY 2 cut(s) 178, 297
BstHHI GCGC 3 cut(s) 177, 296, 662
BstKTI GATC 3 cut(s) 43, 139, 547
BstMAI GTCTC 1 cut(s) 317
BstMBI GATC 3 cut(s) 40, 136, 544
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 1 cut(s) 413
BstPI GGTNACC 1 cut(s) 625
BstSCI CCNGG 3 cut(s) 33, 57, 81
BstSFI CTRYAG 1 cut(s) 701
BstSLI GKGCMC 1 cut(s) 120
BstV1I GCAGC 4 cut(s) 37, 61, 85, 109
BstV2I GAAGAC 1 cut(s) 647
BstXI CCANNNNNNTGG 1 cut(s) 128
Bsu36I CCTNAGG 1 cut(s) 279
BsuRI GGCC 1 cut(s) 647
BtsI GCAGTG 3 cut(s) 411, 559, 710
BtsIMutI CAGTG 5 cut(s) 411, 513, 559, 578, 710
Cac8I GCNNGC 2 cut(s) 349, 409
CfoI GCGC 3 cut(s) 177, 296, 662
Cfr13I GGNCC 4 cut(s) 61, 85, 389, 646
Csp6I GTAC 4 cut(s) 13, 196, 427, 655
CviJI RGCY 5 cut(s) 351, 473, 588, 593, 647
CviKI_1 RGCY 5 cut(s) 351, 473, 588, 593, 647
CviQI GTAC 4 cut(s) 13, 196, 427, 655
DdeI CTNAG 3 cut(s) 6, 279, 581
DinI GGCGCC 1 cut(s) 295
DpnI GATC 3 cut(s) 42, 138, 546
DpnII GATC 3 cut(s) 40, 136, 544
Eam1104I CTCTTC 2 cut(s) 176, 458
EarI CTCTTC 2 cut(s) 176, 458
Eco130I CCWWGG 2 cut(s) 430, 594
Eco47I GGWCC 3 cut(s) 61, 85, 389
Eco81I CCTNAGG 1 cut(s) 279
Eco91I GGTNACC 1 cut(s) 625
EcoO109I RGGNCCY 1 cut(s) 389
EcoO65I GGTNACC 1 cut(s) 625
EcoRI GAATTC 1 cut(s) 517
EcoT14I CCWWGG 2 cut(s) 430, 594
EcoT22I ATGCAT 1 cut(s) 206
EgeI GGCGCC 1 cut(s) 295
EheI GGCGCC 1 cut(s) 295
ErhI CCWWGG 2 cut(s) 430, 594
FaiI YATR 6 cut(s) 21, 45, 69, 93, 233, 620
FaqI GGGAC 3 cut(s) 308, 375, 459
FblI GTMKAC 2 cut(s) 485, 680
Fnu4HI GCNGC 4 cut(s) 26, 50, 74, 98
Fsp4HI GCNGC 4 cut(s) 26, 50, 74, 98
FspBI CTAG 2 cut(s) 474, 534
GlaI GCGC 3 cut(s) 176, 295, 661
GluI GCNGC 4 cut(s) 26, 50, 74, 98
HaeII RGCGCY 2 cut(s) 178, 297
HaeIII GGCC 1 cut(s) 647
HapII CCGG 4 cut(s) 35, 59, 83, 107
HhaI GCGC 3 cut(s) 177, 296, 662
Hin1I GRCGYC 1 cut(s) 294
Hin6I GCGC 3 cut(s) 175, 294, 660
HinP1I GCGC 3 cut(s) 175, 294, 660
HincII GTYRAC 1 cut(s) 576
HindII GTYRAC 1 cut(s) 576
HindIII AAGCTT 1 cut(s) 349
HpaII CCGG 4 cut(s) 35, 59, 83, 107
HphI GGTGA 5 cut(s) 143, 271, 295, 346, 637
Hpy166II GTNNAC 3 cut(s) 486, 576, 681
Hpy188I TCNGA 5 cut(s) 7, 228, 240, 462, 544
Hpy188III TCNNGA 1 cut(s) 603
Hpy8I GTNNAC 3 cut(s) 486, 576, 681
HpyAV CCTTC 1 cut(s) 345
HpyCH4III ACNGT 4 cut(s) 195, 244, 259, 508
HpyCH4V TGCA 6 cut(s) 204, 329, 347, 407, 416, 703
HpyF10VI GCNNNNNNNGC 1 cut(s) 413
HpyF3I CTNAG 3 cut(s) 6, 279, 581
Hsp92I GRCGYC 1 cut(s) 294
HspAI GCGC 3 cut(s) 175, 294, 660
KasI GGCGCC 1 cut(s) 293
KflI GGGWCCC 1 cut(s) 389
Kzo9I GATC 3 cut(s) 40, 136, 544
LguI GCTCTTC 1 cut(s) 458
Lsp1109I GCAGC 4 cut(s) 37, 61, 85, 109
LweI GCATC 2 cut(s) 334, 394
MaeI CTAG 2 cut(s) 474, 534
MaeIII GTNAC 2 cut(s) 502, 625
MalI GATC 3 cut(s) 42, 138, 546
MboI GATC 3 cut(s) 40, 136, 544
MboII GAAGA 6 cut(s) 146, 193, 475, 505, 574, 652
MhlI GDGCHC 1 cut(s) 120
MluCI AATT 7 cut(s) 216, 234, 363, 517, 557, 615, 690
Mly113I GGCGCC 1 cut(s) 294
Mph1103I ATGCAT 1 cut(s) 206
MseI TTAA 4 cut(s) 215, 270, 372, 396
MslI CAYNNNNRTG 1 cut(s) 260
MspI CCGG 4 cut(s) 35, 59, 83, 107
MspR9I CCNGG 3 cut(s) 35, 59, 83
Mva1269I GAATGC 1 cut(s) 483
MwoI GCNNNNNNNGC 1 cut(s) 413
NarI GGCGCC 1 cut(s) 294
NciI CCSGG 3 cut(s) 35, 59, 83
NdeII GATC 3 cut(s) 40, 136, 544
NlaIV GGNNCC 5 cut(s) 119, 295, 390, 391, 438
NmuCI GTSAC 2 cut(s) 502, 625
NsiI ATGCAT 1 cut(s) 206
PciSI GCTCTTC 1 cut(s) 458
PctI GAATGC 1 cut(s) 483
PkrI GCNGC 4 cut(s) 27, 51, 75, 99
PluTI GGCGCC 1 cut(s) 297
PpuMI RGGWCCY 1 cut(s) 389
PsiI TTATAA 1 cut(s) 233
Psp5II RGGWCCY 1 cut(s) 389
PspEI GGTNACC 1 cut(s) 625
PspN4I GGNNCC 5 cut(s) 119, 295, 390, 391, 438
PspPI GGNCC 4 cut(s) 61, 85, 389, 646
PspPPI RGGWCCY 1 cut(s) 389
PstI CTGCAG 1 cut(s) 705
RsaI GTAC 4 cut(s) 14, 197, 428, 656
RsaNI GTAC 4 cut(s) 13, 196, 427, 655
RseI CAYNNNNRTG 1 cut(s) 260
SapI GCTCTTC 1 cut(s) 458
SaqAI TTAA 4 cut(s) 215, 270, 372, 396
SatI GCNGC 4 cut(s) 26, 50, 74, 98
Sau3AI GATC 3 cut(s) 40, 136, 544
Sau96I GGNCC 4 cut(s) 61, 85, 389, 646
ScrFI CCNGG 3 cut(s) 35, 59, 83
SduI GDGCHC 1 cut(s) 120
SetI ASST 5 cut(s) 285, 337, 353, 600, 612
SfaNI GCATC 2 cut(s) 334, 394
SfcI CTRYAG 1 cut(s) 701
SfoI GGCGCC 1 cut(s) 295
SinI GGWCC 3 cut(s) 61, 85, 389
SmiMI CAYNNNNRTG 1 cut(s) 260
Sse9I AATT 7 cut(s) 216, 234, 363, 517, 557, 615, 690
SsiI CCGC 1 cut(s) 481
SspDI GGCGCC 1 cut(s) 293
SspMI CTAG 2 cut(s) 474, 534
StyD4I CCNGG 3 cut(s) 33, 57, 81
StyI CCWWGG 2 cut(s) 430, 594
TaaI ACNGT 4 cut(s) 195, 244, 259, 508
TaqI TCGA 1 cut(s) 39
TasI AATT 7 cut(s) 216, 234, 363, 517, 557, 615, 690
TatI WGTACW 3 cut(s) 12, 195, 654
Tru1I TTAA 4 cut(s) 215, 270, 372, 396
Tru9I TTAA 4 cut(s) 215, 270, 372, 396
TscAI CASTG 5 cut(s) 418, 513, 559, 585, 710
TseFI GTSAC 2 cut(s) 502, 625
TseI GCWGC 4 cut(s) 25, 49, 73, 97
Tsp45I GTSAC 2 cut(s) 502, 625
TspDTI ATGAA 2 cut(s) 203, 278
TspGWI ACGGA 1 cut(s) 310
TspRI CASTG 5 cut(s) 418, 513, 559, 585, 710
VpaK11BI GGWCC 3 cut(s) 61, 85, 389
XapI RAATTY 1 cut(s) 517
XmiI GTMKAC 2 cut(s) 485, 680
XspI CTAG 2 cut(s) 474, 534
Zsp2I ATGCAT 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.