Rroxscaffold_3G00259590

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000065
Physical Location & Seq
Forward (+)
54014014 .. 54014646
633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00259590.1

Sequence Viewer

Length: 633 bp
ATGGCTGACAAGAACCAACAAGTTTATCCTTTGGCTCCGGCTAACGGGTACGTAAGAAGTGATGGAGAGTCTTTGTCCGAAGATGAGCTCAAGCGCAAGAAGAGAATCAAGTGCTTTACTTACATTGGTATTTTCATTGTGTTCCAGATCGCAGTAATGACCGTGTTTGGTCTCACTGTGATGAAAGTCAAGACCCCCAAGGTTAGACTCGGCACAAGCACCATCCCAGACTTCACCTCTTCCAATACAGCGCCTTCATTCAGCACAACCTTCAACACCCAAATCAGGGTCAAGAACACCAACTGGGGTCCTTACAAGTTCGACCAAGGCACTGTGACATTCATGTACCAAAATACATCTATTGGATCAGTCACTGTACCCAAGGGCAAGGCCGGGATGCGTGGCACCAAGAAGATGAACGTGAATGTGAGCTTGAACTCCGGAGAATTGACGACCGGCTCTACCCTAGGCAGTGATTTGAGCGGTGGGGTATTGACGCTGACTAGCGAAGCAAAATTGACCGGAAAGGTTGAATTGATGTTGATCATGAAGAAGAAGAAGTCTGCGACTATGAGCTGCACCATACAAATTGATGTGTCCGGGAAGGCAGTCAAGAGTTTAGAATGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

210

Amino Acids

22.81

Weight (kDa)

9.83

Isoelectric Point (pI)

21.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 95 - 194 2.7e-08 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 404
AccBSI CCGCTC 1 cut(s) 483
AccIII TCCGGA 1 cut(s) 440
AciI CCGC 1 cut(s) 483
AclWI GGATC 1 cut(s) 373
AfaI GTAC 3 cut(s) 50, 347, 378
AfiI CCNNNNNNNGG 3 cut(s) 44, 285, 286
AgsI TTSAA 3 cut(s) 274, 436, 533
AluBI AGCT 3 cut(s) 88, 432, 576
AluI AGCT 3 cut(s) 88, 432, 576
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 1 cut(s) 176
AlwI GGATC 1 cut(s) 373
AlwNI CAGNNNCTG 1 cut(s) 374
Aor13HI TCCGGA 1 cut(s) 440
AoxI GGCC 1 cut(s) 390
ApeKI GCWGC 1 cut(s) 576
AspA2I CCTAGG 1 cut(s) 466
AspLEI GCGC 2 cut(s) 96, 253
AspS9I GGNCC 1 cut(s) 308
AsuC2I CCSGG 2 cut(s) 394, 601
AsuHPI GGTGA 1 cut(s) 226
AvaII GGWCC 1 cut(s) 308
AvrII CCTAGG 1 cut(s) 466
BanI GGYRCC 1 cut(s) 404
BanII GRGCYC 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 90
BbvI GCAGC 1 cut(s) 563
BccI CCATC 2 cut(s) 56, 230
BclI TGATCA 1 cut(s) 543
BcnI CCSGG 2 cut(s) 394, 601
BcoDI GTCTC 1 cut(s) 176
BfaI CTAG 2 cut(s) 467, 504
BfoI RGCGCY 1 cut(s) 254
BisI GCNGC 1 cut(s) 577
BlnI CCTAGG 1 cut(s) 466
BlsI GCNGC 1 cut(s) 578
Bme1390I CCNGG 2 cut(s) 394, 601
Bme18I GGWCC 1 cut(s) 308
BmgT120I GGNCC 1 cut(s) 308
BmiI GGNNCC 3 cut(s) 36, 309, 406
BmrFI CCNGG 2 cut(s) 394, 601
BmrI ACTGGG 1 cut(s) 313
BmsI GCATC 1 cut(s) 387
BmuI ACTGGG 1 cut(s) 313
BpuEI CTTGAG 1 cut(s) 74
BpuMI CCSGG 2 cut(s) 394, 601
BsaAI YACGTR 1 cut(s) 52
BsaBI GATNNNNATC 1 cut(s) 542
BsaI GGTCTC 1 cut(s) 176
BsaJI CCNNGG 4 cut(s) 198, 325, 381, 466
BsaWI WCCGGW 2 cut(s) 440, 521
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 285, 286
Bse118I RCCGGY 1 cut(s) 455
Bse1I ACTGG 1 cut(s) 308
Bse8I GATNNNNATC 1 cut(s) 542
BseAI TCCGGA 1 cut(s) 440
BseDI CCNNGG 4 cut(s) 198, 325, 381, 466
BseGI GGATG 2 cut(s) 222, 402
BseJI GATNNNNATC 1 cut(s) 542
BseLI CCNNNNNNNGG 3 cut(s) 44, 285, 286
BseNI ACTGG 1 cut(s) 308
BseXI GCAGC 1 cut(s) 563
BsgI GTGCAG 1 cut(s) 562
Bsh1285I CGRYCG 1 cut(s) 456
BshFI GGCC 1 cut(s) 392
BshNI GGYRCC 1 cut(s) 404
BsiEI CGRYCG 1 cut(s) 456
BsiHKAI GWGCWC 1 cut(s) 90
BsiSI CCGG 6 cut(s) 38, 393, 441, 456, 522, 600
BslI CCNNNNNNNGG 3 cut(s) 44, 285, 286
BsmAI GTCTC 1 cut(s) 176
BsmI GAATGC 1 cut(s) 629
BsnI GGCC 1 cut(s) 392
Bso31I GGTCTC 1 cut(s) 176
Bsp1286I GDGCHC 1 cut(s) 90
Bsp13I TCCGGA 1 cut(s) 440
Bsp143I GATC 3 cut(s) 147, 365, 543
BspACI CCGC 1 cut(s) 483
BspANI GGCC 1 cut(s) 392
BspEI TCCGGA 1 cut(s) 440
BspHI TCATGA 1 cut(s) 546
BspLI GGNNCC 3 cut(s) 36, 309, 406
BspPI GGATC 1 cut(s) 373
BspT107I GGYRCC 1 cut(s) 404
BspTNI GGTCTC 1 cut(s) 176
BsrBI CCGCTC 1 cut(s) 483
BsrFI RCCGGY 1 cut(s) 455
BsrI ACTGG 1 cut(s) 308
BssAI RCCGGY 1 cut(s) 455
BssECI CCNNGG 4 cut(s) 198, 325, 381, 466
BssMI GATC 3 cut(s) 147, 365, 543
BssT1I CCWWGG 4 cut(s) 198, 325, 381, 466
Bst4CI ACNGT 4 cut(s) 163, 178, 334, 376
Bst6I CTCTTC 2 cut(s) 95, 244
BstBAI YACGTR 1 cut(s) 52
BstF5I GGATG 2 cut(s) 222, 402
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 2 cut(s) 96, 253
BstKTI GATC 3 cut(s) 150, 368, 546
BstMAI GTCTC 1 cut(s) 176
BstMBI GATC 3 cut(s) 147, 365, 543
BstMCI CGRYCG 1 cut(s) 456
BstSCI CCNGG 2 cut(s) 392, 599
BstSNI TACGTA 1 cut(s) 52
BstV1I GCAGC 1 cut(s) 563
BsuRI GGCC 1 cut(s) 392
BtsCI GGATG 2 cut(s) 222, 402
BtsI GCAGTG 1 cut(s) 478
BtsIMutI CAGTG 4 cut(s) 174, 330, 372, 478
CaiI CAGNNNCTG 1 cut(s) 374
CciI TCATGA 1 cut(s) 546
CfoI GCGC 2 cut(s) 96, 253
Cfr10I RCCGGY 1 cut(s) 455
Cfr13I GGNCC 1 cut(s) 308
CseI GACGC 1 cut(s) 505
Csp6I GTAC 3 cut(s) 49, 346, 377
CviAII CATG 2 cut(s) 343, 547
CviJI RGCY 8 cut(s) 5, 35, 41, 88, 392, 432, 459, 576
CviKI_1 RGCY 8 cut(s) 5, 35, 41, 88, 392, 432, 459, 576
CviQI GTAC 3 cut(s) 49, 346, 377
DpnI GATC 3 cut(s) 149, 367, 545
DpnII GATC 3 cut(s) 147, 365, 543
Eam1104I CTCTTC 2 cut(s) 95, 244
EarI CTCTTC 2 cut(s) 95, 244
Ecl136II GAGCTC 1 cut(s) 88
Eco105I TACGTA 1 cut(s) 52
Eco130I CCWWGG 4 cut(s) 198, 325, 381, 466
Eco24I GRGCYC 1 cut(s) 90
Eco31I GGTCTC 1 cut(s) 176
Eco47I GGWCC 1 cut(s) 308
Eco53kI GAGCTC 1 cut(s) 88
EcoICRI GAGCTC 1 cut(s) 88
EcoO109I RGGNCCY 1 cut(s) 308
EcoT14I CCWWGG 4 cut(s) 198, 325, 381, 466
EcoT38I GRGCYC 1 cut(s) 90
ErhI CCWWGG 4 cut(s) 198, 325, 381, 466
FaeI CATG 2 cut(s) 346, 550
FaiI YATR 4 cut(s) 344, 548, 572, 584
FatI CATG 2 cut(s) 342, 546
FbaI TGATCA 1 cut(s) 543
Fnu4HI GCNGC 1 cut(s) 577
FokI GGATG 2 cut(s) 209, 409
FriOI GRGCYC 1 cut(s) 90
Fsp4HI GCNGC 1 cut(s) 577
FspBI CTAG 2 cut(s) 467, 504
GlaI GCGC 2 cut(s) 95, 252
GluI GCNGC 1 cut(s) 577
HaeII RGCGCY 1 cut(s) 254
HaeIII GGCC 1 cut(s) 392
HapII CCGG 6 cut(s) 38, 393, 441, 456, 522, 600
HgaI GACGC 1 cut(s) 505
HhaI GCGC 2 cut(s) 96, 253
Hin1II CATG 2 cut(s) 346, 550
Hin6I GCGC 2 cut(s) 94, 251
HinP1I GCGC 2 cut(s) 94, 251
HinfI GANTC 3 cut(s) 68, 105, 207
HpaII CCGG 6 cut(s) 38, 393, 441, 456, 522, 600
HphI GGTGA 1 cut(s) 226
Hpy188I TCNGA 1 cut(s) 79
Hpy188III TCNNGA 6 cut(s) 145, 190, 292, 441, 547, 613
HpyAV CCTTC 3 cut(s) 264, 280, 598
HpyCH4III ACNGT 4 cut(s) 163, 178, 334, 376
HpyCH4IV ACGT 2 cut(s) 51, 420
HpyCH4V TGCA 2 cut(s) 579, 627
HpySE526I ACGT 2 cut(s) 51, 420
Hsp92II CATG 2 cut(s) 346, 550
HspAI GCGC 2 cut(s) 94, 251
Kpn2I TCCGGA 1 cut(s) 440
Ksp22I TGATCA 1 cut(s) 543
Kzo9I GATC 3 cut(s) 147, 365, 543
LmnI GCTCC 1 cut(s) 40
Lsp1109I GCAGC 1 cut(s) 563
LweI GCATC 1 cut(s) 387
MaeI CTAG 2 cut(s) 467, 504
MaeII ACGT 2 cut(s) 51, 420
MaeIII GTNAC 2 cut(s) 334, 370
MalI GATC 3 cut(s) 149, 367, 545
MbiI CCGCTC 1 cut(s) 483
MboI GATC 3 cut(s) 147, 365, 543
MboII GAAGA 7 cut(s) 92, 112, 231, 424, 562, 565, 568
MhlI GDGCHC 1 cut(s) 90
MluCI AATT 4 cut(s) 446, 515, 533, 588
MlyI GAGTC 2 cut(s) 77, 201
MnlI CCTC 1 cut(s) 247
MroI TCCGGA 1 cut(s) 440
MslI CAYNNNNRTG 1 cut(s) 179
MspI CCGG 6 cut(s) 38, 393, 441, 456, 522, 600
MspR9I CCNGG 2 cut(s) 394, 601
Mva1269I GAATGC 1 cut(s) 629
NciI CCSGG 2 cut(s) 394, 601
NdeII GATC 3 cut(s) 147, 365, 543
NlaIII CATG 2 cut(s) 346, 550
NlaIV GGNNCC 3 cut(s) 36, 309, 406
NmeAIII GCCGAG 1 cut(s) 189
NmuCI GTSAC 2 cut(s) 334, 370
PagI TCATGA 1 cut(s) 546
PctI GAATGC 1 cut(s) 629
PfeI GAWTC 1 cut(s) 105
PfoI TCCNGGA 1 cut(s) 599
PkrI GCNGC 1 cut(s) 578
PleI GAGTC 2 cut(s) 76, 201
PpsI GAGTC 2 cut(s) 76, 201
Ppu21I YACGTR 1 cut(s) 52
PpuMI RGGWCCY 1 cut(s) 308
Psp124BI GAGCTC 1 cut(s) 90
Psp5II RGGWCCY 1 cut(s) 308
PspN4I GGNNCC 3 cut(s) 36, 309, 406
PspPI GGNCC 1 cut(s) 308
PspPPI RGGWCCY 1 cut(s) 308
PstNI CAGNNNCTG 1 cut(s) 374
RsaI GTAC 3 cut(s) 50, 347, 378
RsaNI GTAC 3 cut(s) 49, 346, 377
RseI CAYNNNNRTG 1 cut(s) 179
SacI GAGCTC 1 cut(s) 90
SatI GCNGC 1 cut(s) 577
Sau3AI GATC 3 cut(s) 147, 365, 543
Sau96I GGNCC 1 cut(s) 308
SchI GAGTC 2 cut(s) 77, 201
ScrFI CCNGG 2 cut(s) 394, 601
SduI GDGCHC 1 cut(s) 90
SetI ASST 9 cut(s) 54, 90, 204, 239, 272, 423, 434, 531, 578
SfaNI GCATC 1 cut(s) 387
SinI GGWCC 1 cut(s) 308
SmiMI CAYNNNNRTG 1 cut(s) 179
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
SnaBI TACGTA 1 cut(s) 52
Sse9I AATT 4 cut(s) 446, 515, 533, 588
SsiI CCGC 1 cut(s) 483
SspMI CTAG 2 cut(s) 467, 504
SstI GAGCTC 1 cut(s) 90
StyD4I CCNGG 2 cut(s) 392, 599
StyI CCWWGG 4 cut(s) 198, 325, 381, 466
TaaI ACNGT 4 cut(s) 163, 178, 334, 376
TaiI ACGT 2 cut(s) 54, 423
TaqI TCGA 1 cut(s) 321
TasI AATT 4 cut(s) 446, 515, 533, 588
TfiI GAWTC 1 cut(s) 105
TscAI CASTG 4 cut(s) 181, 337, 379, 478
TseFI GTSAC 2 cut(s) 334, 370
TseI GCWGC 1 cut(s) 576
Tsp45I GTSAC 2 cut(s) 334, 370
TspDTI ATGAA 6 cut(s) 124, 197, 246, 331, 431, 563
TspRI CASTG 4 cut(s) 181, 337, 379, 478
VpaK11BI GGWCC 1 cut(s) 308
XmaJI CCTAGG 1 cut(s) 466
XspI CTAG 2 cut(s) 467, 504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.