Rroxscaffold_3G00259500

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000065
Physical Location & Seq
Reverse (-)
53888060 .. 53890350
2291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00259500.1

Sequence Viewer

Length: 1206 bp
ATGGCTGAGAAGATCAAACAGGCCTTGGCATCAGTCAAAGGTGTTGCTACCAGAAAAGATGAAAAATTGCCCACCTTCCAATCTGAGGAAGAGCTCAAACGCCAGAAGAGGATCAAATTGTTTACATATATTGGTATTTTCATTGTGTTCCAAATCATAGTCATGACCGTATTCGGTCTTACAGTGATGAAAGTGAAAACACCTAAAGTGAGATTGGGAGCCATCAGTATCCAAGAGCTCACCTCCGTCCCTGCAACACCCTTGTTCAACACAAGCTTCACGACCCAAATCAGGGTCAAGAACACAAATTGGGGTCCCTATAAGTTTGATGCAAGCATTGCAACATTCATGTACCAAGGCGTGCCTGTGGGGCAAGTTGCTATTCCAAAAAGCAAGGTCGGGATGCGTTCCACCAAAAAGATTGATGTCACCATGAGTTTGAGTACCGATGGATTACCAAGCAGTACCAATCTCAGTACTGAATTGAACAGCGGGGTGTTGACGCTAACCAGCCAAGCCAAATTGACCGGAAAGGTTGAATTGATGCTCATAATGAAGAAGAAGAAGTCTGCCAATATGGACTGCACCATAGCTTTTGAGTTGTCCACAAAGACTGTCAAAAGTTTACAATGCAAATCCTTGCTTTCTGTTAACCTACAACTAGGGAAACAAAACATTTTCATGAATGAAGAAACAGAGAGATCAGAGAGAGTGACGTACCTGGAGGATGATGACTCCGTTCAGGCTGAAGAAGACGACATGGTTGAGAATCGGAGGAAACTGGAAGATTACTCGCAACGCGCGGAGGACAAGTCGGATGATCCGTTACTGTTTTGGTCGATTCGGATAGTCTTGGCACGTATTCCACCCATGTGGTTTGCTCATTTTATAATTGGGTCAGTTTTGGCTTTGGCCCATTTGGCCCCAACTCTCAAGTATTTGGTTACAATTCCTAAGGGTAAGGCTGGGGGGCGTTTGACAACAAAAATTGGAGTCACCGTGATTCTGAATTCCAAGGCATTGCCGAGAGTCTCAAATCTTGGTAGTGATTTGGATTCCGGGGTGTTGAAGCTTAGCAGCCAAGCAAAGATTAGCGGGAAAGTCGTATTGATGTTCGTGATGAAGAAGAAGAAATCTGCAGAGATGAATTGTACCATTGAAGTTAATTTGGCAACCAAGGGGGTTCAGGCATTGGAATGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

401

Amino Acids

44.41

Weight (kDa)

9.67

Isoelectric Point (pI)

31.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 97 - 196 9.4e-07 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 890
AccII CGCG 2 cut(s) 801, 803
AciI CCGC 3 cut(s) 492, 803, 1095
AclWI GGATC 2 cut(s) 119, 815
AcsI RAATTY 1 cut(s) 1009
AcuI CTGAAG 1 cut(s) 768
AfaI GTAC 6 cut(s) 353, 445, 466, 478, 719, 1153
AfiI CCNNNNNNNGG 3 cut(s) 85, 291, 292
AgsI TTSAA 5 cut(s) 268, 487, 539, 1069, 1160
AjnI CCWGG 1 cut(s) 720
AleI CACNNNNGTG 1 cut(s) 871
AluBI AGCT 5 cut(s) 94, 238, 276, 593, 1072
AluI AGCT 5 cut(s) 94, 238, 276, 593, 1072
Alw21I GWGCWC 2 cut(s) 96, 240
Alw26I GTCTC 1 cut(s) 1036
AlwI GGATC 2 cut(s) 119, 815
AoxI GGCC 3 cut(s) 21, 912, 921
ApeKI GCWGC 1 cut(s) 1077
ApoI RAATTY 1 cut(s) 1009
AspLEI GCGC 1 cut(s) 803
AspS9I GGNCC 3 cut(s) 314, 913, 922
AsuC2I CCSGG 1 cut(s) 1060
AsuHPI GGTGA 3 cut(s) 232, 421, 988
AvaII GGWCC 1 cut(s) 314
AxyI CCTNAGG 1 cut(s) 954
BanII GRGCYC 2 cut(s) 96, 240
BbsI GAAGAC 1 cut(s) 759
Bbv12I GWGCWC 2 cut(s) 96, 240
BbvI GCAGC 1 cut(s) 1089
BccI CCATC 2 cut(s) 230, 443
BciT130I CCWGG 1 cut(s) 722
BciVI GTATCC 1 cut(s) 239
BcnI CCSGG 1 cut(s) 1060
BcoDI GTCTC 1 cut(s) 1036
BfaI CTAG 1 cut(s) 662
BfmI CTRYAG 1 cut(s) 1137
BfuI GTATCC 1 cut(s) 239
BglI GCCNNNNNGGC 2 cut(s) 370, 920
BisI GCNGC 1 cut(s) 1078
BlpI GCTNAGC 1 cut(s) 1073
BlsI GCNGC 1 cut(s) 1079
BmcAI AGTACT 1 cut(s) 478
Bme1390I CCNGG 2 cut(s) 722, 1060
Bme18I GGWCC 1 cut(s) 314
BmgT120I GGNCC 3 cut(s) 314, 913, 922
BmiI GGNNCC 4 cut(s) 220, 315, 316, 924
BmrFI CCNGG 2 cut(s) 722, 1060
BmsI GCATC 4 cut(s) 38, 319, 393, 534
BpiI GAAGAC 1 cut(s) 759
BplI GAGNNNNNCTC 2 cut(s) 227, 259
BpmI CTGGAG 1 cut(s) 743
Bpu1102I GCTNAGC 1 cut(s) 1073
BpuEI CTTGAG 1 cut(s) 917
BpuMI CCSGG 1 cut(s) 1060
BsaAI YACGTR 1 cut(s) 860
BsaJI CCNNGG 5 cut(s) 24, 355, 1014, 1059, 1176
BsaWI WCCGGW 1 cut(s) 527
BsaXI ACNNNNNCTCC 4 cut(s) 797, 827, 984, 1014
Bsc4I CCNNNNNNNGG 3 cut(s) 85, 291, 292
Bse1I ACTGG 1 cut(s) 786
Bse21I CCTNAGG 1 cut(s) 954
Bse3DI GCAATG 2 cut(s) 336, 1019
BseBI CCWGG 1 cut(s) 722
BseDI CCNNGG 5 cut(s) 24, 355, 1014, 1059, 1176
BseGI GGATG 3 cut(s) 408, 733, 823
BseLI CCNNNNNNNGG 3 cut(s) 85, 291, 292
BseMI GCAATG 2 cut(s) 336, 1019
BseMII CTCAG 2 cut(s) 75, 487
BseNI ACTGG 1 cut(s) 786
BseXI GCAGC 1 cut(s) 1089
BseYI CCCAGC 1 cut(s) 965
BsgI GTGCAG 1 cut(s) 568
Bsh1236I CGCG 2 cut(s) 801, 803
BshFI GGCC 3 cut(s) 23, 914, 923
BsiHKAI GWGCWC 2 cut(s) 96, 240
BsiSI CCGG 2 cut(s) 528, 1059
BslFI GGGAC 2 cut(s) 233, 300
BslI CCNNNNNNNGG 3 cut(s) 85, 291, 292
BsmAI GTCTC 1 cut(s) 1036
BsmFI GGGAC 2 cut(s) 233, 300
BsmI GAATGC 1 cut(s) 1202
BsnI GGCC 3 cut(s) 23, 914, 923
Bsp1286I GDGCHC 2 cut(s) 96, 240
Bsp143I GATC 4 cut(s) 12, 111, 701, 820
Bsp1720I GCTNAGC 1 cut(s) 1073
BspACI CCGC 3 cut(s) 492, 803, 1095
BspANI GGCC 3 cut(s) 23, 914, 923
BspCNI CTCAG 2 cut(s) 76, 486
BspFNI CGCG 2 cut(s) 801, 803
BspHI TCATGA 2 cut(s) 162, 681
BspLI GGNNCC 4 cut(s) 220, 315, 316, 924
BspMAI CTGCAG 1 cut(s) 1141
BspPI GGATC 2 cut(s) 119, 815
BspQI GCTCTTC 1 cut(s) 84
BsrDI GCAATG 2 cut(s) 336, 1019
BsrI ACTGG 1 cut(s) 786
BssECI CCNNGG 5 cut(s) 24, 355, 1014, 1059, 1176
BssMI GATC 4 cut(s) 12, 111, 701, 820
BssT1I CCWWGG 4 cut(s) 24, 355, 1014, 1176
Bst2UI CCWGG 1 cut(s) 722
Bst4CI ACNGT 5 cut(s) 169, 184, 616, 831, 1000
Bst6I CTCTTC 2 cut(s) 84, 101
BstAPI GCANNNNNTGC 1 cut(s) 338
BstBAI YACGTR 1 cut(s) 860
BstC8I GCNNGC 2 cut(s) 334, 362
BstDEI CTNAG 5 cut(s) 6, 84, 473, 954, 1073
BstF5I GGATG 3 cut(s) 408, 733, 823
BstFNI CGCG 2 cut(s) 801, 803
BstHHI GCGC 1 cut(s) 803
BstKTI GATC 4 cut(s) 15, 114, 704, 823
BstMAI GTCTC 1 cut(s) 1036
BstMBI GATC 4 cut(s) 12, 111, 701, 820
BstMWI GCNNNNNNNGC 3 cut(s) 338, 370, 920
BstNI CCWGG 1 cut(s) 722
BstSCI CCNGG 2 cut(s) 720, 1058
BstSFI CTRYAG 1 cut(s) 1137
BstUI CGCG 2 cut(s) 801, 803
BstV1I GCAGC 1 cut(s) 1089
BstV2I GAAGAC 1 cut(s) 759
BstXI CCANNNNNNTGG 1 cut(s) 873
Bsu36I CCTNAGG 1 cut(s) 954
BsuI GTATCC 1 cut(s) 239
BsuRI GGCC 3 cut(s) 23, 914, 923
BtsCI GGATG 3 cut(s) 408, 733, 823
BtsIMutI CAGTG 1 cut(s) 189
Cac8I GCNNGC 2 cut(s) 334, 362
CciI TCATGA 2 cut(s) 162, 681
CfoI GCGC 1 cut(s) 803
Cfr13I GGNCC 3 cut(s) 314, 913, 922
CseI GACGC 1 cut(s) 511
Csp6I GTAC 6 cut(s) 352, 444, 465, 477, 718, 1152
CviAII CATG 6 cut(s) 163, 349, 433, 682, 760, 871
CviQI GTAC 6 cut(s) 352, 444, 465, 477, 718, 1152
DdeI CTNAG 5 cut(s) 6, 84, 473, 954, 1073
DpnI GATC 4 cut(s) 14, 113, 703, 822
DpnII GATC 4 cut(s) 12, 111, 701, 820
Eam1104I CTCTTC 2 cut(s) 84, 101
EarI CTCTTC 2 cut(s) 84, 101
Ecl136II GAGCTC 2 cut(s) 94, 238
Eco130I CCWWGG 4 cut(s) 24, 355, 1014, 1176
Eco147I AGGCCT 1 cut(s) 23
Eco24I GRGCYC 2 cut(s) 96, 240
Eco47I GGWCC 1 cut(s) 314
Eco53kI GAGCTC 2 cut(s) 94, 238
Eco57I CTGAAG 1 cut(s) 768
Eco81I CCTNAGG 1 cut(s) 954
EcoICRI GAGCTC 2 cut(s) 94, 238
EcoO109I RGGNCCY 1 cut(s) 314
EcoRI GAATTC 1 cut(s) 1009
EcoRII CCWGG 1 cut(s) 720
EcoT14I CCWWGG 4 cut(s) 24, 355, 1014, 1176
EcoT38I GRGCYC 2 cut(s) 96, 240
ErhI CCWWGG 4 cut(s) 24, 355, 1014, 1176
FaeI CATG 6 cut(s) 166, 352, 436, 685, 763, 874
FaqI GGGAC 2 cut(s) 233, 300
FatI CATG 6 cut(s) 162, 348, 432, 681, 759, 870
FauI CCCGC 2 cut(s) 485, 1088
Fnu4HI GCNGC 1 cut(s) 1078
FokI GGATG 3 cut(s) 415, 740, 830
FriOI GRGCYC 2 cut(s) 96, 240
Fsp4HI GCNGC 1 cut(s) 1078
FspBI CTAG 1 cut(s) 662
GlaI GCGC 1 cut(s) 802
GluI GCNGC 1 cut(s) 1078
GsaI CCCAGC 1 cut(s) 969
GsuI CTGGAG 1 cut(s) 743
HaeIII GGCC 3 cut(s) 23, 914, 923
HapII CCGG 2 cut(s) 528, 1059
HgaI GACGC 1 cut(s) 511
HhaI GCGC 1 cut(s) 803
Hin1II CATG 6 cut(s) 166, 352, 436, 685, 763, 874
Hin6I GCGC 1 cut(s) 801
HinP1I GCGC 1 cut(s) 801
HincII GTYRAC 2 cut(s) 501, 652
HindII GTYRAC 2 cut(s) 501, 652
HindIII AAGCTT 2 cut(s) 274, 1070
HinfI GANTC 7 cut(s) 734, 769, 841, 993, 1003, 1029, 1055
HpaI GTTAAC 1 cut(s) 652
HpaII CCGG 2 cut(s) 528, 1059
HphI GGTGA 3 cut(s) 232, 421, 988
Hpy166II GTNNAC 5 cut(s) 123, 501, 606, 626, 652
Hpy188I TCNGA 6 cut(s) 85, 706, 774, 817, 846, 1008
Hpy188III TCNNGA 6 cut(s) 163, 280, 298, 400, 682, 1117
Hpy8I GTNNAC 5 cut(s) 123, 501, 606, 626, 652
HpyAV CCTTC 1 cut(s) 85
HpyCH4III ACNGT 5 cut(s) 169, 184, 616, 831, 1000
HpyCH4IV ACGT 2 cut(s) 716, 859
HpyCH4V TGCA 7 cut(s) 254, 332, 341, 585, 633, 1139, 1200
HpyF10VI GCNNNNNNNGC 3 cut(s) 338, 370, 920
HpyF3I CTNAG 5 cut(s) 6, 84, 473, 954, 1073
HpySE526I ACGT 2 cut(s) 716, 859
Hsp92II CATG 6 cut(s) 166, 352, 436, 685, 763, 874
HspAI GCGC 1 cut(s) 801
KflI GGGWCCC 1 cut(s) 314
KspAI GTTAAC 1 cut(s) 652
Kzo9I GATC 4 cut(s) 12, 111, 701, 820
LguI GCTCTTC 1 cut(s) 84
LmnI GCTCC 1 cut(s) 218
Lsp1109I GCAGC 1 cut(s) 1089
LweI GCATC 4 cut(s) 38, 319, 393, 534
MaeI CTAG 1 cut(s) 662
MaeII ACGT 2 cut(s) 716, 859
MaeIII GTNAC 5 cut(s) 427, 712, 825, 943, 994
MalI GATC 4 cut(s) 14, 113, 703, 822
MboI GATC 4 cut(s) 12, 111, 701, 820
MhlI GDGCHC 2 cut(s) 96, 240
MlyI GAGTC 3 cut(s) 728, 1002, 1038
MmeI TCCRAC 1 cut(s) 795
MnlI CCTC 6 cut(s) 79, 102, 253, 718, 768, 799
MseI TTAA 2 cut(s) 651, 1164
MslI CAYNNNNRTG 4 cut(s) 161, 680, 871, 1195
MspA1I CMGCKG 1 cut(s) 492
MspI CCGG 2 cut(s) 528, 1059
MspR9I CCNGG 2 cut(s) 722, 1060
Mva1269I GAATGC 1 cut(s) 1202
MvaI CCWGG 1 cut(s) 722
MvnI CGCG 2 cut(s) 801, 803
MwoI GCNNNNNNNGC 3 cut(s) 338, 370, 920
NciI CCSGG 1 cut(s) 1060
NdeII GATC 4 cut(s) 12, 111, 701, 820
NlaIII CATG 6 cut(s) 166, 352, 436, 685, 763, 874
NlaIV GGNNCC 4 cut(s) 220, 315, 316, 924
NmeAIII GCCGAG 1 cut(s) 1050
NmuCI GTSAC 3 cut(s) 427, 712, 994
OliI CACNNNNGTG 1 cut(s) 871
PagI TCATGA 2 cut(s) 162, 681
PceI AGGCCT 1 cut(s) 23
PciSI GCTCTTC 1 cut(s) 84
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PctI GAATGC 1 cut(s) 1202
PfeI GAWTC 4 cut(s) 769, 841, 1003, 1055
PkrI GCNGC 1 cut(s) 1079
PleI GAGTC 3 cut(s) 728, 1001, 1037
PpsI GAGTC 3 cut(s) 728, 1001, 1037
Ppu21I YACGTR 1 cut(s) 860
PpuMI RGGWCCY 1 cut(s) 314
PsiI TTATAA 1 cut(s) 890
Psp124BI GAGCTC 2 cut(s) 96, 240
Psp5II RGGWCCY 1 cut(s) 314
Psp6I CCWGG 1 cut(s) 720
PspFI CCCAGC 1 cut(s) 965
PspGI CCWGG 1 cut(s) 720
PspN4I GGNNCC 4 cut(s) 220, 315, 316, 924
PspPI GGNCC 3 cut(s) 314, 913, 922
PspPPI RGGWCCY 1 cut(s) 314
PstI CTGCAG 1 cut(s) 1141
RsaI GTAC 6 cut(s) 353, 445, 466, 478, 719, 1153
RsaNI GTAC 6 cut(s) 352, 444, 465, 477, 718, 1152
RseI CAYNNNNRTG 4 cut(s) 161, 680, 871, 1195
SacI GAGCTC 2 cut(s) 96, 240
SapI GCTCTTC 1 cut(s) 84
SaqAI TTAA 2 cut(s) 651, 1164
SatI GCNGC 1 cut(s) 1078
Sau3AI GATC 4 cut(s) 12, 111, 701, 820
Sau96I GGNCC 3 cut(s) 314, 913, 922
ScaI AGTACT 1 cut(s) 478
SchI GAGTC 3 cut(s) 728, 1002, 1038
ScrFI CCNGG 2 cut(s) 722, 1060
SduI GDGCHC 2 cut(s) 96, 240
SfaNI GCATC 4 cut(s) 38, 319, 393, 534
SfcI CTRYAG 1 cut(s) 1137
SfiI GGCCNNNNNGGCC 1 cut(s) 920
SinI GGWCC 1 cut(s) 314
SmiMI CAYNNNNRTG 4 cut(s) 161, 680, 871, 1195
SmlI CTYRAG 1 cut(s) 932
SmoI CTYRAG 1 cut(s) 932
SseBI AGGCCT 1 cut(s) 23
SsiI CCGC 3 cut(s) 492, 803, 1095
SspMI CTAG 1 cut(s) 662
SstI GAGCTC 2 cut(s) 96, 240
StuI AGGCCT 1 cut(s) 23
StyD4I CCNGG 2 cut(s) 720, 1058
StyI CCWWGG 4 cut(s) 24, 355, 1014, 1176
TaaI ACNGT 5 cut(s) 169, 184, 616, 831, 1000
TaiI ACGT 2 cut(s) 719, 862
TaqI TCGA 1 cut(s) 839
TaqII GACCGA 1 cut(s) 164
TatI WGTACW 1 cut(s) 476
TfiI GAWTC 4 cut(s) 769, 841, 1003, 1055
Tru1I TTAA 2 cut(s) 651, 1164
Tru9I TTAA 2 cut(s) 651, 1164
TscAI CASTG 1 cut(s) 189
TseFI GTSAC 3 cut(s) 427, 712, 994
TseI GCWGC 1 cut(s) 1077
Tsp45I GTSAC 3 cut(s) 427, 712, 994
TspGWI ACGGA 3 cut(s) 235, 727, 813
TspRI CASTG 1 cut(s) 189
VpaK11BI GGWCC 1 cut(s) 314
XapI RAATTY 1 cut(s) 1009
XspI CTAG 1 cut(s) 662
ZrmI AGTACT 1 cut(s) 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.