Rroxscaffold_3G00259510

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000065
Physical Location & Seq
Forward (+)
53891327 .. 53893920
2594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00259510.1

Sequence Viewer

Length: 801 bp
ATGGCTGAGGAGATCAACCAGGCTTATCCTTTGGCACCAGCAAATGGTTACACAAGAAGTGACGGAGAATCTTTGGTCTCTGAAGATGAACTCAAACGTAGGAAGAGAATCAAATTGTTTACCTATATTGGTATTTTCATTGTTTTTCAGATCATTGTCATGACCGTGTTTGGTCTCACTGTGATGAAAGTCAAGACCCCAAAGGTGAGGTTGGGCGAAATCAGCATCACAAACTTTAACTCAGCAGCTGCAACTCCTTCATTTGACACAACGTTCAACACCCAAATCAGGGTCAAGAACACCAACTGGGGTCCTTACAAATTTGATGCAGGCACTGTAACATTCACATACCAAGGCACACCTGTCGGGACAGTAATGGTACCTAAGAGCAAAGCTGGAATGCGCTCTACCAAGAAAATCAACGTCGAAGTGAGTTTAAACACTGATGCATTGCCAAGCAGTTCAACTCTTAGCAGTGAATTGAACAGTGGGGTGTTGACGCTGACTAGCCAAGCCAAATTGACCGGAAAGGTGGAATTGATGCTCATAATGAAGAAGAAGAAGTCTGCCAATATGGACTGCACCATAGCTTTTGATTTGTCCACAAAGACTATCAAAAGTTTACAGTGCAAGGATCGAATTGAGGCTTTGGACATTGATTTCCCCCAACCTGACCTTAGGAGTCTTCACTTTCATCACGGCAAGACCAAATACAGTCATGACAGTGACTTGAAACACAATGAAAATACCAACATACATAGCCAACGTGATTCTCTTCTGGCGTCTGAGCTCATCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

266

Amino Acids

29.62

Weight (kDa)

9.36

Isoelectric Point (pI)

32.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 96 - 195 1.2e-07 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 379
AccB1I GGYRCC 2 cut(s) 34, 379
AccB7I CCANNNNNTGG 1 cut(s) 44
AclI AACGTT 1 cut(s) 272
AclWI GGATC 1 cut(s) 642
AcsI RAATTY 1 cut(s) 320
AcuI CTGAAG 1 cut(s) 102
AcyI GRCGYC 1 cut(s) 782
AfaI GTAC 1 cut(s) 381
AfiI CCNNNNNNNGG 3 cut(s) 44, 288, 289
AgsI TTSAA 4 cut(s) 277, 465, 484, 733
AjnI CCWGG 1 cut(s) 18
AluBI AGCT 4 cut(s) 248, 395, 590, 790
AluI AGCT 4 cut(s) 248, 395, 590, 790
Alw21I GWGCWC 1 cut(s) 792
Alw26I GTCTC 2 cut(s) 82, 179
AlwI GGATC 1 cut(s) 642
AlwNI CAGNNNCTG 2 cut(s) 248, 335
ApeKI GCWGC 2 cut(s) 245, 248
ApoI RAATTY 1 cut(s) 320
Asp718I GGTACC 1 cut(s) 379
AspLEI GCGC 1 cut(s) 405
AspS9I GGNCC 1 cut(s) 311
AsuHPI GGTGA 1 cut(s) 217
AvaII GGWCC 1 cut(s) 311
AxyI CCTNAGG 1 cut(s) 677
BanI GGYRCC 2 cut(s) 34, 379
BanII GRGCYC 1 cut(s) 792
BbsI GAAGAC 1 cut(s) 677
Bbv12I GWGCWC 1 cut(s) 792
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 2 cut(s) 235, 257
BceAI ACGGC 1 cut(s) 715
BcgI CGANNNNNNTGC 2 cut(s) 346, 380
BciT130I CCWGG 1 cut(s) 20
BcoDI GTCTC 2 cut(s) 82, 179
BfaI CTAG 1 cut(s) 507
BisI GCNGC 2 cut(s) 246, 249
BlsI GCNGC 2 cut(s) 247, 250
Bme1390I CCNGG 1 cut(s) 20
Bme18I GGWCC 1 cut(s) 311
BmgT120I GGNCC 1 cut(s) 311
BmiI GGNNCC 3 cut(s) 36, 312, 381
BmrFI CCNGG 1 cut(s) 20
BmrI ACTGGG 1 cut(s) 316
BmsI GCATC 4 cut(s) 234, 316, 436, 531
BmuI ACTGGG 1 cut(s) 316
BpiI GAAGAC 1 cut(s) 677
Bpu10I CCTNAGC 1 cut(s) 6
BsaHI GRCGYC 1 cut(s) 782
BsaI GGTCTC 2 cut(s) 82, 179
BsaJI CCNNGG 1 cut(s) 352
BsaWI WCCGGW 1 cut(s) 524
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 288, 289
Bse1I ACTGG 1 cut(s) 311
Bse21I CCTNAGG 1 cut(s) 677
Bse3DI GCAATG 1 cut(s) 449
BseBI CCWGG 1 cut(s) 20
BseDI CCNNGG 1 cut(s) 352
BseLI CCNNNNNNNGG 3 cut(s) 44, 288, 289
BseMI GCAATG 1 cut(s) 449
BseMII CTCAG 2 cut(s) 255, 777
BseNI ACTGG 1 cut(s) 311
BseRI GAGGAG 1 cut(s) 23
BseXI GCAGC 2 cut(s) 235, 257
BsgI GTGCAG 1 cut(s) 565
BshNI GGYRCC 2 cut(s) 34, 379
BsiHKAI GWGCWC 1 cut(s) 792
BsiSI CCGG 1 cut(s) 525
BslFI GGGAC 1 cut(s) 382
BslI CCNNNNNNNGG 3 cut(s) 44, 288, 289
BsmAI GTCTC 2 cut(s) 82, 179
BsmFI GGGAC 1 cut(s) 382
BsmI GAATGC 1 cut(s) 405
Bso31I GGTCTC 2 cut(s) 82, 179
Bsp1286I GDGCHC 1 cut(s) 792
Bsp143I GATC 3 cut(s) 12, 150, 634
BspCNI CTCAG 2 cut(s) 254, 778
BspHI TCATGA 2 cut(s) 159, 718
BspLI GGNNCC 3 cut(s) 36, 312, 381
BspPI GGATC 1 cut(s) 642
BspT107I GGYRCC 2 cut(s) 34, 379
BspTNI GGTCTC 2 cut(s) 82, 179
BsrDI GCAATG 1 cut(s) 449
BsrI ACTGG 1 cut(s) 311
BssECI CCNNGG 1 cut(s) 352
BssMI GATC 3 cut(s) 12, 150, 634
BssNI GRCGYC 1 cut(s) 782
BssT1I CCWWGG 1 cut(s) 352
Bst2UI CCWGG 1 cut(s) 20
Bst4CI ACNGT 8 cut(s) 166, 181, 337, 373, 488, 627, 716, 725
Bst6I CTCTTC 2 cut(s) 98, 780
BstACI GRCGYC 1 cut(s) 782
BstC8I GCNNGC 1 cut(s) 331
BstDEI CTNAG 6 cut(s) 6, 241, 384, 470, 677, 786
BstHHI GCGC 1 cut(s) 405
BstKTI GATC 3 cut(s) 15, 153, 637
BstMAI GTCTC 2 cut(s) 82, 179
BstMBI GATC 3 cut(s) 12, 150, 634
BstMWI GCNNNNNNNGC 1 cut(s) 222
BstNI CCWGG 1 cut(s) 20
BstSCI CCNGG 1 cut(s) 18
BstV1I GCAGC 2 cut(s) 235, 257
BstV2I GAAGAC 1 cut(s) 677
Bsu36I CCTNAGG 1 cut(s) 677
BtsI GCAGTG 1 cut(s) 481
BtsIMutI CAGTG 7 cut(s) 177, 333, 441, 481, 493, 632, 730
Cac8I GCNNGC 1 cut(s) 331
CaiI CAGNNNCTG 2 cut(s) 248, 335
CciI TCATGA 2 cut(s) 159, 718
CfoI GCGC 1 cut(s) 405
Cfr13I GGNCC 1 cut(s) 311
CseI GACGC 2 cut(s) 508, 771
Csp6I GTAC 1 cut(s) 380
CviAII CATG 2 cut(s) 160, 719
CviQI GTAC 1 cut(s) 380
DdeI CTNAG 6 cut(s) 6, 241, 384, 470, 677, 786
DpnI GATC 3 cut(s) 14, 152, 636
DpnII GATC 3 cut(s) 12, 150, 634
DraI TTTAAA 1 cut(s) 438
Eam1104I CTCTTC 2 cut(s) 98, 780
EarI CTCTTC 2 cut(s) 98, 780
Ecl136II GAGCTC 1 cut(s) 790
Eco130I CCWWGG 1 cut(s) 352
Eco24I GRGCYC 1 cut(s) 792
Eco31I GGTCTC 2 cut(s) 82, 179
Eco47I GGWCC 1 cut(s) 311
Eco53kI GAGCTC 1 cut(s) 790
Eco57I CTGAAG 1 cut(s) 102
Eco81I CCTNAGG 1 cut(s) 677
EcoICRI GAGCTC 1 cut(s) 790
EcoO109I RGGNCCY 1 cut(s) 311
EcoRII CCWGG 1 cut(s) 18
EcoT14I CCWWGG 1 cut(s) 352
EcoT22I ATGCAT 1 cut(s) 451
EcoT38I GRGCYC 1 cut(s) 792
ErhI CCWWGG 1 cut(s) 352
FaeI CATG 2 cut(s) 163, 722
FaiI YATR 9 cut(s) 126, 161, 349, 548, 575, 587, 720, 755, 759
FaqI GGGAC 1 cut(s) 382
FatI CATG 2 cut(s) 159, 718
Fnu4HI GCNGC 2 cut(s) 246, 249
FriOI GRGCYC 1 cut(s) 792
Fsp4HI GCNGC 2 cut(s) 246, 249
FspBI CTAG 1 cut(s) 507
GlaI GCGC 1 cut(s) 404
GluI GCNGC 2 cut(s) 246, 249
HapII CCGG 1 cut(s) 525
HgaI GACGC 2 cut(s) 508, 771
HhaI GCGC 1 cut(s) 405
Hin1I GRCGYC 1 cut(s) 782
Hin1II CATG 2 cut(s) 163, 722
Hin6I GCGC 1 cut(s) 403
HinP1I GCGC 1 cut(s) 403
HincII GTYRAC 1 cut(s) 498
HindII GTYRAC 1 cut(s) 498
HinfI GANTC 4 cut(s) 68, 108, 682, 770
HpaII CCGG 1 cut(s) 525
HphI GGTGA 1 cut(s) 217
Hpy166II GTNNAC 4 cut(s) 120, 498, 603, 623
Hpy188I TCNGA 4 cut(s) 82, 150, 787, 800
Hpy188III TCNNGA 5 cut(s) 160, 193, 295, 367, 719
Hpy8I GTNNAC 4 cut(s) 120, 498, 603, 623
Hpy99I CGWCG 1 cut(s) 428
HpyAV CCTTC 1 cut(s) 267
HpyCH4III ACNGT 8 cut(s) 166, 181, 337, 373, 488, 627, 716, 725
HpyCH4IV ACGT 4 cut(s) 97, 272, 423, 766
HpyCH4V TGCA 5 cut(s) 251, 329, 449, 582, 630
HpyF10VI GCNNNNNNNGC 1 cut(s) 222
HpyF3I CTNAG 6 cut(s) 6, 241, 384, 470, 677, 786
HpySE526I ACGT 4 cut(s) 97, 272, 423, 766
Hsp92I GRCGYC 1 cut(s) 782
Hsp92II CATG 2 cut(s) 163, 722
HspAI GCGC 1 cut(s) 403
KpnI GGTACC 1 cut(s) 383
Kzo9I GATC 3 cut(s) 12, 150, 634
Lsp1109I GCAGC 2 cut(s) 235, 257
LweI GCATC 4 cut(s) 234, 316, 436, 531
MaeI CTAG 1 cut(s) 507
MaeII ACGT 4 cut(s) 97, 272, 423, 766
MaeIII GTNAC 4 cut(s) 47, 59, 337, 725
MalI GATC 3 cut(s) 14, 152, 636
MboI GATC 3 cut(s) 12, 150, 634
MboII GAAGA 8 cut(s) 95, 115, 565, 568, 571, 677, 767, 787
MhlI GDGCHC 1 cut(s) 792
MluCI AATT 6 cut(s) 113, 320, 479, 518, 536, 639
MlyI GAGTC 1 cut(s) 691
MnlI CCTC 2 cut(s) 201, 637
Mph1103I ATGCAT 1 cut(s) 451
MseI TTAA 2 cut(s) 237, 437
MslI CAYNNNNRTG 4 cut(s) 158, 164, 182, 723
MspA1I CMGCKG 1 cut(s) 248
MspI CCGG 1 cut(s) 525
MspR9I CCNGG 1 cut(s) 20
MssI GTTTAAAC 1 cut(s) 438
Mva1269I GAATGC 1 cut(s) 405
MvaI CCWGG 1 cut(s) 20
MwoI GCNNNNNNNGC 1 cut(s) 222
NdeII GATC 3 cut(s) 12, 150, 634
NlaIII CATG 2 cut(s) 163, 722
NlaIV GGNNCC 3 cut(s) 36, 312, 381
NmuCI GTSAC 2 cut(s) 59, 725
NsiI ATGCAT 1 cut(s) 451
PagI TCATGA 2 cut(s) 159, 718
PctI GAATGC 1 cut(s) 405
PfeI GAWTC 3 cut(s) 68, 108, 770
PflMI CCANNNNNTGG 1 cut(s) 44
PkrI GCNGC 2 cut(s) 247, 250
PleI GAGTC 1 cut(s) 690
PmeI GTTTAAAC 1 cut(s) 438
PpsI GAGTC 1 cut(s) 690
PpuMI RGGWCCY 1 cut(s) 311
Psp124BI GAGCTC 1 cut(s) 792
Psp1406I AACGTT 1 cut(s) 272
Psp5II RGGWCCY 1 cut(s) 311
Psp6I CCWGG 1 cut(s) 18
PspGI CCWGG 1 cut(s) 18
PspN4I GGNNCC 3 cut(s) 36, 312, 381
PspPI GGNCC 1 cut(s) 311
PspPPI RGGWCCY 1 cut(s) 311
PstNI CAGNNNCTG 2 cut(s) 248, 335
PvuII CAGCTG 1 cut(s) 248
RsaI GTAC 1 cut(s) 381
RsaNI GTAC 1 cut(s) 380
RseI CAYNNNNRTG 4 cut(s) 158, 164, 182, 723
SacI GAGCTC 1 cut(s) 792
SaqAI TTAA 2 cut(s) 237, 437
SatI GCNGC 2 cut(s) 246, 249
Sau3AI GATC 3 cut(s) 12, 150, 634
Sau96I GGNCC 1 cut(s) 311
SchI GAGTC 1 cut(s) 691
ScrFI CCNGG 1 cut(s) 20
SduI GDGCHC 1 cut(s) 792
SfaNI GCATC 4 cut(s) 234, 316, 436, 531
SinI GGWCC 1 cut(s) 311
SmiMI CAYNNNNRTG 4 cut(s) 158, 164, 182, 723
Sse9I AATT 6 cut(s) 113, 320, 479, 518, 536, 639
SspMI CTAG 1 cut(s) 507
SstI GAGCTC 1 cut(s) 792
StyD4I CCNGG 1 cut(s) 18
StyI CCWWGG 1 cut(s) 352
TaaI ACNGT 8 cut(s) 166, 181, 337, 373, 488, 627, 716, 725
TaiI ACGT 4 cut(s) 100, 275, 426, 769
TaqI TCGA 2 cut(s) 426, 637
TasI AATT 6 cut(s) 113, 320, 479, 518, 536, 639
TfiI GAWTC 3 cut(s) 68, 108, 770
Tru1I TTAA 2 cut(s) 237, 437
Tru9I TTAA 2 cut(s) 237, 437
TscAI CASTG 7 cut(s) 184, 340, 448, 481, 493, 632, 730
TseFI GTSAC 2 cut(s) 59, 725
TseI GCWGC 2 cut(s) 245, 248
Tsp45I GTSAC 2 cut(s) 59, 725
TspDTI ATGAA 7 cut(s) 102, 127, 200, 249, 566, 683, 756
TspGWI ACGGA 1 cut(s) 78
TspRI CASTG 7 cut(s) 184, 340, 448, 481, 493, 632, 730
Van91I CCANNNNNTGG 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 311
XapI RAATTY 1 cut(s) 320
XspI CTAG 1 cut(s) 507
Zsp2I ATGCAT 1 cut(s) 451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.