Rorug07G0032200

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000065
Physical Location & Seq
Forward (+)
2241540 .. 2244902
3363 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0032200.1

Sequence Viewer

Length: 1062 bp
ATGGGGGTCGATTACTACAACATACTGAAGGTGAACCGGAACGCGAGCGAGGACGACTTGAAGAAGGCGTACAAGCGGCTGGCGATGATTTGGCACCCGGACAAAAACCCGGCCGGAAAACGACCCGAGGCCGAGTCCAAGTTCAAGCAAATCTCCGAGGCCTACGACGTCCTCTCCGACCCCACCAAGCGCCAGATCTACGATCTCTACGGCGAGGAGGCTCTCAAATCCGGCCAGTTCCCCCCTCCCTCTTCCTCCCGCTCCGCCGCGCCCCACCAGCACCACTACTACCACCGCGGCAACCACAACGCCACGTCGTTTCGGTTCAATCCGCGGGACGCGGAGGACATTTACGCCGAGATTTTTGGATCGGAGGGCGGCGGCGGCGGAGGAGCTGGAGGGAGTGGCGGCGGAGGGAGGGCGTATAGGGACGGGTTCTTCAGGACGTCGAATGGGGCCGGTGGGCCGGAGTTCGCCGGGACCAGTAGTGGGCCTGGGCCGGGACTGAGGAAGGCCAATGCCCTGGAGAATAACCTGGCTTGCAGCTTGGAGGAGCTCTATAAGGGATTCAAGAAGAAGATGAAGATTTCGAGAAGCATTTTCGATTCGGCTGGTAAGGTCCGGACTCTGGAGGAGATATTAACCATTGAGATCAAACCTGGTTGGAAGAAAGGCACCAAGATAACCTTCCCTGAGAAGGGTAATCAAGAGCCTGGTGTTATTCCAGCAGATCTGATTTTTGTAGTTGATGAAAAACCTCATGCACTTTATAAGAGGGACGGTAATGATCTGGTGGTGAACCAGGAGATCACACTGCTGGAGGCACTCACTGGGAAGAATCTTGAACTAACTACCCTGGATGGAAGGAATCTTATGATCCCGTTGACCGATATCATCAAACCTGGGGCTGAAATGGTTGTACCAAATGAAGGAATGCCAATCTCAAAAGAACCGGGGAGAAAGGGAAATTTGAGAATCAAGTTTGACGTCAAGTATCCTTCAAGACTTACTACAGAACAGAAATCAGATTTGAAAAGAGTTTTGGGAGGAGTTTCATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

353

Amino Acids

38.73

Weight (kDa)

9.14

Isoelectric Point (pI)

48.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 4 - 68 2.4e-26 DnaJ domain
DnaJ_C PF01556 176 - 333 5.2e-40 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 771
AatII GACGTC 3 cut(s) 171, 449, 990
AccB1I GGYRCC 2 cut(s) 93, 674
AccBSI CCGCTC 1 cut(s) 261
AccII CGCG 5 cut(s) 44, 269, 297, 334, 341
AccIII TCCGGA 1 cut(s) 621
AclWI GGATC 2 cut(s) 376, 871
AcoI YGGCCR 2 cut(s) 111, 232
AcsI RAATTY 1 cut(s) 967
AcuI CTGAAG 2 cut(s) 47, 424
AcyI GRCGYC 3 cut(s) 168, 446, 987
AfaI GTAC 2 cut(s) 71, 921
AfiI CCNNNNNNNGG 6 cut(s) 489, 500, 628, 697, 698, 929
AgsI TTSAA 7 cut(s) 61, 145, 328, 571, 845, 1002, 1033
AjiI CACGTC 1 cut(s) 315
AjnI CCWGG 8 cut(s) 493, 522, 534, 658, 712, 801, 855, 901
AjuI GAANNNNNNNTTGG 4 cut(s) 671, 703, 1025, 1057
AluBI AGCT 3 cut(s) 395, 546, 556
AluI AGCT 3 cut(s) 395, 546, 556
Alw21I GWGCWC 1 cut(s) 558
AlwI GGATC 2 cut(s) 376, 871
Ama87I CYCGRG 1 cut(s) 125
Aor13HI TCCGGA 1 cut(s) 621
AoxI GGCC 9 cut(s) 111, 129, 159, 232, 456, 464, 491, 497, 513
ApeKI GCWGC 1 cut(s) 543
ApoI RAATTY 1 cut(s) 967
AspLEI GCGC 2 cut(s) 192, 271
AspS9I GGNCC 6 cut(s) 456, 464, 480, 491, 497, 619
AsuC2I CCSGG 5 cut(s) 98, 110, 478, 501, 954
AsuHPI GGTGA 2 cut(s) 43, 808
AvaI CYCGRG 1 cut(s) 125
AvaII GGWCC 2 cut(s) 480, 619
BanI GGYRCC 2 cut(s) 93, 674
BanII GRGCYC 1 cut(s) 558
BarI GAAGNNNNNNTAC 2 cut(s) 53, 85
Bbv12I GWGCWC 1 cut(s) 558
BbvI GCAGC 1 cut(s) 555
BccI CCATC 1 cut(s) 854
BceAI ACGGC 1 cut(s) 226
BciT130I CCWGG 8 cut(s) 495, 524, 536, 660, 714, 803, 857, 903
BciVI GTATCC 1 cut(s) 1005
BcnI CCSGG 5 cut(s) 98, 110, 478, 501, 954
BfmI CTRYAG 1 cut(s) 1011
BfoI RGCGCY 1 cut(s) 193
BfuI GTATCC 1 cut(s) 1005
BglII AGATCT 2 cut(s) 195, 730
BisI GCNGC 8 cut(s) 77, 267, 298, 379, 382, 385, 409, 544
BlsI GCNGC 8 cut(s) 78, 268, 299, 380, 383, 386, 410, 545
Bme18I GGWCC 2 cut(s) 480, 619
BmeT110I CYCGRG 1 cut(s) 125
BmgBI CACGTC 1 cut(s) 315
BmgT120I GGNCC 6 cut(s) 456, 464, 480, 491, 497, 619
BmiI GGNNCC 4 cut(s) 95, 457, 481, 676
BmrI ACTGGG 1 cut(s) 840
BmuI ACTGGG 1 cut(s) 840
BpmI CTGGAG 4 cut(s) 417, 545, 650, 839
BpuMI CCSGG 5 cut(s) 98, 110, 478, 501, 954
BsaHI GRCGYC 3 cut(s) 168, 446, 987
BsaJI CCNNGG 9 cut(s) 126, 156, 295, 332, 494, 522, 855, 902, 953
BsaWI WCCGGW 2 cut(s) 36, 621
BsaXI ACNNNNNCTCC 2 cut(s) 158, 188
Bsc4I CCNNNNNNNGG 6 cut(s) 489, 500, 628, 697, 698, 929
Bse118I RCCGGY 1 cut(s) 458
Bse1I ACTGG 3 cut(s) 235, 483, 835
BseAI TCCGGA 1 cut(s) 621
BseBI CCWGG 8 cut(s) 495, 524, 536, 660, 714, 803, 857, 903
BseDI CCNNGG 9 cut(s) 126, 156, 295, 332, 494, 522, 855, 902, 953
BseGI GGATG 1 cut(s) 865
BseLI CCNNNNNNNGG 6 cut(s) 489, 500, 628, 697, 698, 929
BseMII CTCAG 2 cut(s) 497, 684
BseNI ACTGG 3 cut(s) 235, 483, 835
BseRI GAGGAG 5 cut(s) 230, 405, 566, 647, 1062
BseX3I CGGCCG 1 cut(s) 111
BseXI GCAGC 1 cut(s) 555
Bsh1236I CGCG 5 cut(s) 44, 269, 297, 334, 341
Bsh1285I CGRYCG 1 cut(s) 114
BshFI GGCC 9 cut(s) 113, 131, 161, 234, 458, 466, 493, 499, 515
BshNI GGYRCC 2 cut(s) 93, 674
BsiEI CGRYCG 1 cut(s) 114
BsiHKAI GWGCWC 1 cut(s) 558
BsiHKCI CYCGRG 1 cut(s) 125
BslFI GGGAC 5 cut(s) 350, 443, 493, 516, 791
BslI CCNNNNNNNGG 6 cut(s) 489, 500, 628, 697, 698, 929
BsmFI GGGAC 5 cut(s) 350, 443, 493, 516, 791
BsmI GAATGC 1 cut(s) 939
BsnI GGCC 9 cut(s) 113, 131, 161, 234, 458, 466, 493, 499, 515
BsoBI CYCGRG 1 cut(s) 125
Bsp1286I GDGCHC 1 cut(s) 558
Bsp13I TCCGGA 1 cut(s) 621
Bsp143I GATC 8 cut(s) 195, 202, 368, 651, 730, 787, 807, 876
BspANI GGCC 9 cut(s) 113, 131, 161, 234, 458, 466, 493, 499, 515
BspCNI CTCAG 2 cut(s) 498, 685
BspEI TCCGGA 1 cut(s) 621
BspFNI CGCG 5 cut(s) 44, 269, 297, 334, 341
BspLI GGNNCC 4 cut(s) 95, 457, 481, 676
BspPI GGATC 2 cut(s) 376, 871
BspT107I GGYRCC 2 cut(s) 93, 674
BsrBI CCGCTC 1 cut(s) 261
BsrFI RCCGGY 1 cut(s) 458
BsrI ACTGG 3 cut(s) 235, 483, 835
BssAI RCCGGY 1 cut(s) 458
BssECI CCNNGG 9 cut(s) 126, 156, 295, 332, 494, 522, 855, 902, 953
BssMI GATC 8 cut(s) 195, 202, 368, 651, 730, 787, 807, 876
BssNI GRCGYC 3 cut(s) 168, 446, 987
Bst2UI CCWGG 8 cut(s) 495, 524, 536, 660, 714, 803, 857, 903
Bst4CI ACNGT 1 cut(s) 782
Bst6I CTCTTC 1 cut(s) 256
BstACI GRCGYC 3 cut(s) 168, 446, 987
BstC8I GCNNGC 3 cut(s) 46, 81, 541
BstDEI CTNAG 2 cut(s) 506, 693
BstDSI CCRYGG 2 cut(s) 295, 332
BstF5I GGATG 1 cut(s) 865
BstFNI CGCG 5 cut(s) 44, 269, 297, 334, 341
BstH2I RGCGCY 1 cut(s) 193
BstHHI GCGC 2 cut(s) 192, 271
BstKTI GATC 8 cut(s) 198, 205, 371, 654, 733, 790, 810, 879
BstMBI GATC 8 cut(s) 195, 202, 368, 651, 730, 787, 807, 876
BstMCI CGRYCG 1 cut(s) 114
BstMWI GCNNNNNNNGC 2 cut(s) 277, 384
BstNI CCWGG 8 cut(s) 495, 524, 536, 660, 714, 803, 857, 903
BstSFI CTRYAG 1 cut(s) 1011
BstUI CGCG 5 cut(s) 44, 269, 297, 334, 341
BstV1I GCAGC 1 cut(s) 555
BstX2I RGATCY 2 cut(s) 195, 730
BstXI CCANNNNNNTGG 1 cut(s) 523
BstYI RGATCY 2 cut(s) 195, 730
BstZI CGGCCG 1 cut(s) 111
BsuI GTATCC 1 cut(s) 1005
BsuRI GGCC 9 cut(s) 113, 131, 161, 234, 458, 466, 493, 499, 515
BtgI CCRYGG 2 cut(s) 295, 332
BtgZI GCGATG 1 cut(s) 98
BtrI CACGTC 1 cut(s) 315
BtsCI GGATG 1 cut(s) 865
BtsI GCAGTG 1 cut(s) 812
BtsIMutI CAGTG 2 cut(s) 812, 828
Cac8I GCNNGC 3 cut(s) 46, 81, 541
CfoI GCGC 2 cut(s) 192, 271
Cfr10I RCCGGY 1 cut(s) 458
Cfr13I GGNCC 6 cut(s) 456, 464, 480, 491, 497, 619
Cfr42I CCGCGG 2 cut(s) 298, 335
CseI GACGC 1 cut(s) 347
CsiI ACCWGGT 1 cut(s) 658
Csp6I GTAC 2 cut(s) 70, 920
CviAII CATG 1 cut(s) 761
CviQI GTAC 2 cut(s) 70, 920
DdeI CTNAG 2 cut(s) 506, 693
DpnI GATC 8 cut(s) 197, 204, 370, 653, 732, 789, 809, 878
DpnII GATC 8 cut(s) 195, 202, 368, 651, 730, 787, 807, 876
EaeI YGGCCR 2 cut(s) 111, 232
EagI CGGCCG 1 cut(s) 111
Eam1104I CTCTTC 1 cut(s) 256
EarI CTCTTC 1 cut(s) 256
EciI GGCGGA 3 cut(s) 253, 402, 426
Ecl136II GAGCTC 1 cut(s) 556
EclXI CGGCCG 1 cut(s) 111
Eco147I AGGCCT 1 cut(s) 161
Eco24I GRGCYC 1 cut(s) 558
Eco32I GATATC 1 cut(s) 892
Eco47I GGWCC 2 cut(s) 480, 619
Eco52I CGGCCG 1 cut(s) 111
Eco53kI GAGCTC 1 cut(s) 556
Eco57I CTGAAG 2 cut(s) 47, 424
Eco88I CYCGRG 1 cut(s) 125
EcoICRI GAGCTC 1 cut(s) 556
EcoRII CCWGG 8 cut(s) 493, 522, 534, 658, 712, 801, 855, 901
EcoRV GATATC 1 cut(s) 892
EcoT38I GRGCYC 1 cut(s) 558
FaeI CATG 1 cut(s) 764
FaiI YATR 7 cut(s) 23, 426, 561, 762, 771, 875, 1060
FalI AAGNNNNNCTT 2 cut(s) 671, 703
FaqI GGGAC 5 cut(s) 350, 443, 493, 516, 791
FatI CATG 1 cut(s) 760
FauI CCCGC 2 cut(s) 266, 327
Fnu4HI GCNGC 8 cut(s) 77, 267, 298, 379, 382, 385, 409, 544
FokI GGATG 1 cut(s) 872
FriOI GRGCYC 1 cut(s) 558
Fsp4HI GCNGC 8 cut(s) 77, 267, 298, 379, 382, 385, 409, 544
GlaI GCGC 2 cut(s) 191, 270
GluI GCNGC 8 cut(s) 77, 267, 298, 379, 382, 385, 409, 544
GsuI CTGGAG 4 cut(s) 417, 545, 650, 839
HaeII RGCGCY 1 cut(s) 193
HaeIII GGCC 9 cut(s) 113, 131, 161, 234, 458, 466, 493, 499, 515
HgaI GACGC 1 cut(s) 347
HhaI GCGC 2 cut(s) 192, 271
Hin1I GRCGYC 3 cut(s) 168, 446, 987
Hin1II CATG 1 cut(s) 764
Hin6I GCGC 2 cut(s) 190, 269
HinP1I GCGC 2 cut(s) 190, 269
HincII GTYRAC 1 cut(s) 885
HindII GTYRAC 1 cut(s) 885
HinfI GANTC 7 cut(s) 134, 567, 605, 625, 838, 868, 975
HphI GGTGA 2 cut(s) 43, 808
Hpy166II GTNNAC 3 cut(s) 34, 799, 885
Hpy188I TCNGA 5 cut(s) 157, 178, 373, 735, 1027
Hpy188III TCNNGA 8 cut(s) 442, 571, 591, 622, 629, 707, 842, 1002
Hpy8I GTNNAC 3 cut(s) 34, 799, 885
Hpy99I CGWCG 3 cut(s) 170, 319, 451
HpyAV CCTTC 8 cut(s) 22, 58, 505, 691, 697, 858, 923, 1008
HpyCH4III ACNGT 1 cut(s) 782
HpyCH4IV ACGT 4 cut(s) 168, 314, 446, 987
HpyCH4V TGCA 2 cut(s) 543, 764
HpyF10VI GCNNNNNNNGC 2 cut(s) 277, 384
HpyF3I CTNAG 2 cut(s) 506, 693
HpySE526I ACGT 4 cut(s) 168, 314, 446, 987
Hsp92I GRCGYC 3 cut(s) 168, 446, 987
Hsp92II CATG 1 cut(s) 764
HspAI GCGC 2 cut(s) 190, 269
Kpn2I TCCGGA 1 cut(s) 621
KspI CCGCGG 2 cut(s) 298, 335
Kzo9I GATC 8 cut(s) 195, 202, 368, 651, 730, 787, 807, 876
LmnI GCTCC 3 cut(s) 266, 392, 553
Lsp1109I GCAGC 1 cut(s) 555
MabI ACCWGGT 1 cut(s) 658
MaeII ACGT 4 cut(s) 168, 314, 446, 987
MalI GATC 8 cut(s) 197, 204, 370, 653, 732, 789, 809, 878
MbiI CCGCTC 1 cut(s) 261
MboI GATC 8 cut(s) 195, 202, 368, 651, 730, 787, 807, 876
MboII GAAGA 8 cut(s) 73, 243, 430, 586, 589, 595, 679, 847
MflI RGATCY 2 cut(s) 195, 730
MhlI GDGCHC 1 cut(s) 558
MluCI AATT 1 cut(s) 967
MlyI GAGTC 2 cut(s) 143, 619
MmeI TCCRAC 2 cut(s) 201, 644
MroI TCCGGA 1 cut(s) 621
MseI TTAA 1 cut(s) 641
MspA1I CMGCKG 2 cut(s) 297, 334
Mva1269I GAATGC 1 cut(s) 939
MvaI CCWGG 8 cut(s) 495, 524, 536, 660, 714, 803, 857, 903
MvnI CGCG 5 cut(s) 44, 269, 297, 334, 341
MwoI GCNNNNNNNGC 2 cut(s) 277, 384
NciI CCSGG 5 cut(s) 98, 110, 478, 501, 954
NdeII GATC 8 cut(s) 195, 202, 368, 651, 730, 787, 807, 876
NlaIII CATG 1 cut(s) 764
NlaIV GGNNCC 4 cut(s) 95, 457, 481, 676
NmeAIII GCCGAG 2 cut(s) 157, 382
PceI AGGCCT 1 cut(s) 161
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 1 cut(s) 939
PfeI GAWTC 5 cut(s) 567, 605, 838, 868, 975
PkrI GCNGC 8 cut(s) 78, 268, 299, 380, 383, 386, 410, 545
PleI GAGTC 2 cut(s) 142, 619
PpsI GAGTC 2 cut(s) 142, 619
PsiI TTATAA 1 cut(s) 771
Psp124BI GAGCTC 1 cut(s) 558
Psp6I CCWGG 8 cut(s) 493, 522, 534, 658, 712, 801, 855, 901
PspGI CCWGG 8 cut(s) 493, 522, 534, 658, 712, 801, 855, 901
PspN4I GGNNCC 4 cut(s) 95, 457, 481, 676
PspPI GGNCC 6 cut(s) 456, 464, 480, 491, 497, 619
PsuI RGATCY 2 cut(s) 195, 730
RsaI GTAC 2 cut(s) 71, 921
RsaNI GTAC 2 cut(s) 70, 920
SacI GAGCTC 1 cut(s) 558
SacII CCGCGG 2 cut(s) 298, 335
SaqAI TTAA 1 cut(s) 641
SatI GCNGC 8 cut(s) 77, 267, 298, 379, 382, 385, 409, 544
Sau3AI GATC 8 cut(s) 195, 202, 368, 651, 730, 787, 807, 876
Sau96I GGNCC 6 cut(s) 456, 464, 480, 491, 497, 619
SchI GAGTC 2 cut(s) 143, 619
SduI GDGCHC 1 cut(s) 558
SexAI ACCWGGT 1 cut(s) 658
SfcI CTRYAG 1 cut(s) 1011
Sfr303I CCGCGG 2 cut(s) 298, 335
SgrBI CCGCGG 2 cut(s) 298, 335
SinI GGWCC 2 cut(s) 480, 619
Sse9I AATT 1 cut(s) 967
SseBI AGGCCT 1 cut(s) 161
SstI GAGCTC 1 cut(s) 558
StuI AGGCCT 1 cut(s) 161
TaaI ACNGT 1 cut(s) 782
TaiI ACGT 4 cut(s) 171, 317, 449, 990
TaqI TCGA 4 cut(s) 9, 449, 590, 603
TaqII GACCGA 1 cut(s) 902
TasI AATT 1 cut(s) 967
TauI GCSGC 7 cut(s) 79, 269, 300, 381, 384, 387, 411
TfiI GAWTC 5 cut(s) 567, 605, 838, 868, 975
Tru1I TTAA 1 cut(s) 641
Tru9I TTAA 1 cut(s) 641
TscAI CASTG 2 cut(s) 819, 835
TseI GCWGC 1 cut(s) 543
TspDTI ATGAA 4 cut(s) 596, 765, 942, 1044
TspRI CASTG 2 cut(s) 819, 835
VpaK11BI GGWCC 2 cut(s) 480, 619
XapI RAATTY 1 cut(s) 967
ZraI GACGTC 3 cut(s) 169, 447, 988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.