Rorug07G0032300

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000065
Physical Location & Seq
Forward (+)
2264011 .. 2276319
12309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0032300.1

Sequence Viewer

Length: 2874 bp
ATGGCGGAGGAGAAGCCTGAAGTGCTGGACGCGGTGCTGAAGGAAACGGTTGATCTGGAGAACATACCCATTGAGGAGGTGTTTGAGAATCTGAGATGTAGCAAAGAGGGTCTCAGCAGTGAGGCTGCTGAGGAAAGATTAACCATTTTTGGGCATAACAAGCTTGAGGAAAAGCAGGAGAGCAAGTTTATCAAGTTTCTGGGGTTTATGTGGAATCCTCTCTCATGGGTTATGGAAGCTGCTGCTATAATGGCCATTGCGCTTGCAAATGGAGGAGGCAAGCCTCCTGACTGGCAAGATTTTGTGGGTATTATTACTCTGCTGGTCATCAACTCCACCATTAGTTTCATCGAGGAAAATAATGCGGGTAATGCTGCAGCAGCTCTCATGGCTCGTCTTGCTCCTAAAGCCAAGGTTCTTCGAGATGGAAGGTGGAACGAGCAAGATGCTGCTCTCCTAGTACCAGGTGACATAATTAGTATCAAACTTGGTGATATCGTTCCAGCTGATGCACGGTTACTTGAAGGGGATCCATTGAAAATTGATCAGTCTGCACTTACAGGCGAGTCTCTTCCTGTGACAAAAGGCCCTGGGGATGGTGTGTACTCTGGTTCAACTTGCAAACAAGGAGAGATTGAAGCAGTGGTCATTGCCACTGGAGTGCATACCTTCTTTGGGAAGGCTGCTCACCTTGTTGATAGCACTAACCAAGTGGGCCACTTCCAAAAGGTCTTAACTGCAATAGGGAATTTCTGCATATGCTCTATTGCTGTGGGTATGGTAATAGAGATAATTGTCATGTACCCAATTCAAGACCGAGAGTATCGCCCTGGAATTGACAATCTTCTTGTGCTTCTCATTGGTGGAATTCCAATTGCAATGCCCACAGTTTTGTCCGTGACAATGGCAATTGGCTCTCATAGATTAGCACAGCAGGGAGCTATCACAAAGAGAATGACAGCAATTGAAGAGATGGCGGGCATGGATGTGCTATGCAGTGATAAAACTGGAACTCTAACACTGAACAAGCTTACAGTTGATAAAAATCTTATTGAGGTTTTTGCAAAAGGAGTGGATCCGGATACTGTTGTTCTGATGGCAGCTCGAGCATCCAGGACAGAGAATCAAGATGCAATAGATACTGCTATAGTTGGGATGCTGGCTGATCCTAAGGAGGCGCGTGCTGGTGTTCAAGAAATACACTTCCTTCCTTTCAATCCTACTGATAAGCGAACTGCATTGACTTATATTGACCGTGATGGCAAAATGCATAGAGTTAGCAAAGGTGCACCGGAGCAGATTCTACATCTCGCCCACAATAAGTCGGACATTGAGCGTAGAGTTCATGCTGTGATTGATAAGTTTGCTGAGCGAGGGTTACGGTCTCTTGCTGTAGCATACCAGGAAGTTCCAGAAGGAATCAAAGAGGGTGCTGGAGGCCCGTGGCAATTTATTGGTCTAATGCCACTCTTTGACCCACCTAGGCATGACAGTGCAGAGACAATACGGAGGGCTTTAAATCTTGGAGTAAATGTGAAAATGATTACAGGTGATCAACTGGCCATAGGAAAGGAGACTGGACGTCGTTTGGGAATGGGAACCAATATGTATCCTTCATCTGCTTTACTAGGACAGGACAAGGATGAATCAATTGCGGCTTTACCCATTGATGATCTGATAGAAAAAGCCGATGGCTTTGCTGGTGTTTTCCCAGAGCACAAATACGAGATTGTAAAACGCTTGCAAGCAAGGAAACATATCTGTGGAATGACCGGTGATGGAGTTAATGATGCTCCTGCCCTCAAAAAAGCTGATATTGGTATTGCTGTTGCTGATGCAACAGATGCAGCCCGTAGTGCTTCTGATATTGTGCTAACTGAACCTGGCCTTAGCGTTATCATTAGTGCTGTTTTGACTAGTCGGGCAATCTTCCAGAGGATGAAAAATTACACAATATATGCTGTTTCCATCACAATTCGTATTGTGATGGGTTTCATGTTGCTGGCCCTCATATGGAAGTTCGACTTTCCACCTTTCATGGTGCTTATTATTGCAATCCTCAATGATGGTACTATCATGACGATATCAAAGGATAGGGTTAAACCATCTCCTCTGCCAGATAGCTGGAAGCTGTCGGAGATTTTTGCAACTGGAATTGTGCTCGGTACCTACTTGGCAATAATGACTGTGATATTCTTTTGGGCAGCATACAAAACAGACTTCTTCCCTAGAATATTTGGGGTATCAACCCTTGAGAAGACAGCTCATGATGACTTTCGGAAACTTGCCTCTGCTATATATCTACAAGTGAGCATCATTAGTCAGGCCCTCATATTTGTTACACGCTCTCGAAGTTGGTCCTTTGTTGAGCGGCCTGGAATGTTGCTTGTTGCGGCTTTCCTGATAGCCCAGCTGATTGCCACCTTGATAGCAGTGTATGCTAACTGGGAGTTTGCTGCAATCGAAGGGATTGGATGGGGTTGGGCTGGGGTGATCTGGCTCTATAACATCATCTTCTATATCCCTCTGGATATCATAAAGTTCATGATACGCTATGCTCTGAGCGGGAAGGCTTGGGATCTTCTCATTGAGCAAAGGATTGCTTTCACAAGGCAAAAAGATTTTGGAAAGGAACAGCGTGAGCTTCAATGGGCACATGCACAAAGAACACTGCATGGTTTGCAACCACCAGATACCAAGATGTTTACTGAAAGAACACATTTCACAGAACTCAATCAGATGGCTGAAGAAGCCAAAAGAAGAGCTGAAATTGCAAGGTTGAGAGAGCTGCATACACTAAAAGGTCACGTAGAATCAGTGGTGAGATTGAAGGGTCTCGACATCGACACAATTCAGCAAGCATACACAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

957

Amino Acids

105.44

Weight (kDa)

5.9

Isoelectric Point (pI)

38.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 21 - 84 5e-15 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 133 - 232 1.1e-30 P-type ATPase actuator domain
Hydrolase PF00702 328 - 605 2e-13 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 375 - 496 7e-06 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1585
Acc65I GGTACC 1 cut(s) 2165
AccB1I GGYRCC 1 cut(s) 2165
AccBSI CCGCTC 2 cut(s) 2371, 2565
AccII CGCG 2 cut(s) 32, 1180
AccIII TCCGGA 1 cut(s) 1078
AciI CCGC 8 cut(s) 5, 32, 365, 977, 1655, 2371, 2393, 2565
AclWI GGATC 6 cut(s) 524, 537, 1070, 1083, 1160, 2586
AcoI YGGCCR 2 cut(s) 252, 1560
AcsI RAATTY 2 cut(s) 748, 867
AcuI CTGAAG 3 cut(s) 39, 59, 2766
AcyI GRCGYC 1 cut(s) 1582
AfaI GTAC 5 cut(s) 462, 605, 803, 2071, 2167
AfiI CCNNNNNNNGG 4 cut(s) 150, 596, 675, 2013
AgeI ACCGGT 1 cut(s) 1772
AhdI GACNNNNNGTC 1 cut(s) 1581
AhlI ACTAGT 1 cut(s) 1916
AjnI CCWGG 7 cut(s) 463, 589, 829, 1112, 1401, 1882, 2374
AleI CACNNNNGTG 1 cut(s) 659
Alw21I GWGCWC 3 cut(s) 1291, 1719, 2163
Alw26I GTCTC 6 cut(s) 116, 573, 1389, 1493, 1568, 2840
Alw44I GTGCAC 1 cut(s) 1287
AlwI GGATC 6 cut(s) 524, 537, 1070, 1083, 1160, 2586
Ama87I CYCGRG 1 cut(s) 1104
Aor13HI TCCGGA 1 cut(s) 1078
AoxI GGCC 9 cut(s) 252, 586, 715, 1438, 1560, 1885, 2004, 2325, 2372
ApaLI GTGCAC 1 cut(s) 1287
ApoI RAATTY 2 cut(s) 748, 867
AsiGI ACCGGT 1 cut(s) 1772
Asp718I GGTACC 1 cut(s) 2165
AspA2I CCTAGG 1 cut(s) 1481
AspLEI GCGC 2 cut(s) 262, 1180
AspS9I GGNCC 6 cut(s) 587, 715, 1439, 2005, 2326, 2358
AsuHPI GGTGA 7 cut(s) 479, 503, 680, 1562, 1787, 2503, 2833
AvaI CYCGRG 1 cut(s) 1104
AvaII GGWCC 1 cut(s) 2358
AvrII CCTAGG 1 cut(s) 1481
AxyI CCTNAGG 1 cut(s) 1170
BaeGI GKGCMC 2 cut(s) 1291, 2656
BaeI ACNNNNGTAYC 2 cut(s) 1074, 1107
BalI TGGCCA 2 cut(s) 254, 1562
BamHI GGATCC 2 cut(s) 529, 1075
BanI GGYRCC 1 cut(s) 2165
BbsI GAAGAC 1 cut(s) 2264
Bbv12I GWGCWC 3 cut(s) 1291, 1719, 2163
BbvCI CCTCAGC 1 cut(s) 129
BcgI CGANNNNNNTGC 4 cut(s) 428, 462, 1679, 1713
BciT130I CCWGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
BciVI GTATCC 2 cut(s) 1075, 1620
BclI TGATCA 2 cut(s) 544, 1552
BcoDI GTCTC 6 cut(s) 116, 573, 1389, 1493, 1568, 2840
BcuI ACTAGT 1 cut(s) 1916
BfaI CTAG 6 cut(s) 458, 1482, 1628, 1917, 2229, 2872
BfmI CTRYAG 3 cut(s) 375, 1146, 1392
BfuI GTATCC 2 cut(s) 1075, 1620
BlnI CCTAGG 1 cut(s) 1481
BlpI GCTNAGC 1 cut(s) 1368
Bme1390I CCNGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
Bme18I GGWCC 1 cut(s) 2358
BmeRI GACNNNNNGTC 1 cut(s) 1581
BmeT110I CYCGRG 1 cut(s) 1104
BmgT120I GGNCC 6 cut(s) 587, 715, 1439, 2005, 2326, 2358
BmiI GGNNCC 4 cut(s) 531, 1077, 1600, 2167
BmrFI CCNGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
BmrI ACTGGG 1 cut(s) 2455
BmsI GCATC 9 cut(s) 436, 499, 1118, 1120, 1146, 1780, 1825, 1834, 2322
BmuI ACTGGG 1 cut(s) 2455
BpiI GAAGAC 1 cut(s) 2264
BpmI CTGGAG 3 cut(s) 77, 678, 1455
Bpu10I CCTNAGC 2 cut(s) 129, 1889
Bpu1102I GCTNAGC 1 cut(s) 1368
BpuEI CTTGAG 2 cut(s) 185, 2273
BsaAI YACGTR 1 cut(s) 2809
BsaBI GATNNNNATC 1 cut(s) 1044
BsaHI GRCGYC 1 cut(s) 1582
BsaI GGTCTC 3 cut(s) 116, 1389, 2840
BsaJI CCNNGG 6 cut(s) 411, 589, 590, 829, 1442, 1481
BsaWI WCCGGW 3 cut(s) 1078, 1291, 1772
BsaXI ACNNNNNCTCC 4 cut(s) 170, 200, 1518, 1548
Bsc4I CCNNNNNNNGG 4 cut(s) 150, 596, 675, 2013
Bse118I RCCGGY 1 cut(s) 1772
Bse1I ACTGG 7 cut(s) 296, 661, 1012, 1563, 1582, 2155, 2450
Bse21I CCTNAGG 1 cut(s) 1170
Bse3DI GCAATG 3 cut(s) 255, 648, 885
Bse8I GATNNNNATC 1 cut(s) 1044
BseAI TCCGGA 1 cut(s) 1078
BseBI CCWGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
BseDI CCNNGG 6 cut(s) 411, 589, 590, 829, 1442, 1481
BseGI GGATG 7 cut(s) 601, 991, 1109, 1161, 1648, 1944, 2480
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 4 cut(s) 150, 596, 675, 2013
BseMI GCAATG 3 cut(s) 255, 648, 885
BseMII CTCAG 5 cut(s) 83, 120, 127, 1359, 2552
BseNI ACTGG 7 cut(s) 296, 661, 1012, 1563, 1582, 2155, 2450
BseRI GAGGAG 4 cut(s) 23, 89, 288, 2100
BseSI GKGCMC 2 cut(s) 1291, 2656
BseYI CCCAGC 2 cut(s) 2409, 2486
BsgI GTGCAG 2 cut(s) 537, 1515
Bsh1236I CGCG 2 cut(s) 32, 1180
BshFI GGCC 9 cut(s) 254, 588, 717, 1440, 1562, 1887, 2006, 2327, 2374
BshNI GGYRCC 1 cut(s) 2165
BshTI ACCGGT 1 cut(s) 1772
BsiHKAI GWGCWC 3 cut(s) 1291, 1719, 2163
BsiHKCI CYCGRG 1 cut(s) 1104
BsiSI CCGG 3 cut(s) 1079, 1292, 1773
BslI CCNNNNNNNGG 4 cut(s) 150, 596, 675, 2013
BsmAI GTCTC 6 cut(s) 116, 573, 1389, 1493, 1568, 2840
BsnI GGCC 9 cut(s) 254, 588, 717, 1440, 1562, 1887, 2006, 2327, 2374
Bso31I GGTCTC 3 cut(s) 116, 1389, 2840
BsoBI CYCGRG 1 cut(s) 1104
Bsp1286I GDGCHC 4 cut(s) 1291, 1719, 2163, 2656
Bsp13I TCCGGA 1 cut(s) 1078
Bsp143I GATC 9 cut(s) 52, 529, 544, 1075, 1165, 1552, 1672, 2493, 2578
Bsp1720I GCTNAGC 1 cut(s) 1368
BspACI CCGC 8 cut(s) 5, 32, 365, 977, 1655, 2371, 2393, 2565
BspANI GGCC 9 cut(s) 254, 588, 717, 1440, 1562, 1887, 2006, 2327, 2374
BspCNI CTCAG 5 cut(s) 84, 121, 126, 1360, 2553
BspEI TCCGGA 1 cut(s) 1078
BspFNI CGCG 2 cut(s) 32, 1180
BspHI TCATGA 3 cut(s) 2076, 2266, 2544
BspLI GGNNCC 4 cut(s) 531, 1077, 1600, 2167
BspMAI CTGCAG 1 cut(s) 379
BspPI GGATC 6 cut(s) 524, 537, 1070, 1083, 1160, 2586
BspQI GCTCTTC 1 cut(s) 2755
BspT107I GGYRCC 1 cut(s) 2165
BspTNI GGTCTC 3 cut(s) 116, 1389, 2840
BsrBI CCGCTC 2 cut(s) 2371, 2565
BsrDI GCAATG 3 cut(s) 255, 648, 885
BsrFI RCCGGY 1 cut(s) 1772
BsrI ACTGG 7 cut(s) 296, 661, 1012, 1563, 1582, 2155, 2450
BssAI RCCGGY 1 cut(s) 1772
BssECI CCNNGG 6 cut(s) 411, 589, 590, 829, 1442, 1481
BssMI GATC 9 cut(s) 52, 529, 544, 1075, 1165, 1552, 1672, 2493, 2578
BssNI GRCGYC 1 cut(s) 1582
BssT1I CCWWGG 2 cut(s) 411, 1481
Bst2UI CCWGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
Bst6I CTCTTC 3 cut(s) 576, 963, 2755
BstACI GRCGYC 1 cut(s) 1582
BstAPI GCANNNNNTGC 3 cut(s) 1844, 2438, 2680
BstBAI YACGTR 1 cut(s) 2809
BstC8I GCNNGC 9 cut(s) 264, 281, 979, 1161, 1182, 1742, 1746, 2004, 2859
BstDEI CTNAG 7 cut(s) 92, 113, 129, 1170, 1368, 1889, 2561
BstDSI CCRYGG 1 cut(s) 1442
BstF5I GGATG 7 cut(s) 601, 991, 1109, 1161, 1648, 1944, 2480
BstFNI CGCG 2 cut(s) 32, 1180
BstHHI GCGC 2 cut(s) 262, 1180
BstKTI GATC 9 cut(s) 55, 532, 547, 1078, 1168, 1555, 1675, 2496, 2581
BstMAI GTCTC 6 cut(s) 116, 573, 1389, 1493, 1568, 2840
BstMBI GATC 9 cut(s) 52, 529, 544, 1075, 1165, 1552, 1672, 2493, 2578
BstNI CCWGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
BstNSI RCATGY 1 cut(s) 2660
BstSCI CCNGG 7 cut(s) 463, 589, 829, 1112, 1401, 1882, 2374
BstSFI CTRYAG 3 cut(s) 375, 1146, 1392
BstSLI GKGCMC 2 cut(s) 1291, 2656
BstUI CGCG 2 cut(s) 32, 1180
BstV2I GAAGAC 1 cut(s) 2264
BstX2I RGATCY 3 cut(s) 529, 1075, 2578
BstXI CCANNNNNNTGG 1 cut(s) 2124
BstYI RGATCY 3 cut(s) 529, 1075, 2578
Bsu36I CCTNAGG 1 cut(s) 1170
BsuI GTATCC 2 cut(s) 1075, 1620
BsuRI GGCC 9 cut(s) 254, 588, 717, 1440, 1562, 1887, 2006, 2327, 2374
BtgI CCRYGG 1 cut(s) 1442
BtsCI GGATG 7 cut(s) 601, 991, 1109, 1161, 1648, 1944, 2480
BtsI GCAGTG 5 cut(s) 124, 648, 1003, 2439, 2669
BtsIMutI CAGTG 9 cut(s) 124, 648, 654, 1003, 1019, 1498, 2439, 2669, 2823
Cac8I GCNNGC 9 cut(s) 264, 281, 979, 1161, 1182, 1742, 1746, 2004, 2859
CciI TCATGA 3 cut(s) 2076, 2266, 2544
CfoI GCGC 2 cut(s) 262, 1180
Cfr10I RCCGGY 1 cut(s) 1772
Cfr13I GGNCC 6 cut(s) 587, 715, 1439, 2005, 2326, 2358
CseI GACGC 1 cut(s) 38
CsiI ACCWGGT 1 cut(s) 463
Csp6I GTAC 5 cut(s) 461, 604, 802, 2070, 2166
CspAI ACCGGT 1 cut(s) 1772
CspCI CAANNNNNGTGG 2 cut(s) 1053, 1088
CviQI GTAC 5 cut(s) 461, 604, 802, 2070, 2166
DdeI CTNAG 7 cut(s) 92, 113, 129, 1170, 1368, 1889, 2561
DpnI GATC 9 cut(s) 54, 531, 546, 1077, 1167, 1554, 1674, 2495, 2580
DpnII GATC 9 cut(s) 52, 529, 544, 1075, 1165, 1552, 1672, 2493, 2578
DraI TTTAAA 1 cut(s) 1518
DriI GACNNNNNGTC 1 cut(s) 1581
EaeI YGGCCR 2 cut(s) 252, 1560
Eam1104I CTCTTC 3 cut(s) 576, 963, 2755
Eam1105I GACNNNNNGTC 1 cut(s) 1581
EarI CTCTTC 3 cut(s) 576, 963, 2755
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 411, 1481
Eco31I GGTCTC 3 cut(s) 116, 1389, 2840
Eco32I GATATC 3 cut(s) 496, 2085, 2533
Eco47I GGWCC 1 cut(s) 2358
Eco57I CTGAAG 3 cut(s) 39, 59, 2766
Eco81I CCTNAGG 1 cut(s) 1170
Eco88I CYCGRG 1 cut(s) 1104
EcoO109I RGGNCCY 2 cut(s) 587, 2326
EcoRI GAATTC 1 cut(s) 867
EcoRII CCWGG 7 cut(s) 463, 589, 829, 1112, 1401, 1882, 2374
EcoRV GATATC 3 cut(s) 496, 2085, 2533
EcoT14I CCWWGG 2 cut(s) 411, 1481
EcoT22I ATGCAT 1 cut(s) 1272
ErhI CCWWGG 2 cut(s) 411, 1481
FalI AAGNNNNNCTT 4 cut(s) 2009, 2041, 2587, 2619
FauI CCCGC 3 cut(s) 358, 970, 2558
FauNDI CATATG 2 cut(s) 758, 2012
FbaI TGATCA 2 cut(s) 544, 1552
FokI GGATG 7 cut(s) 608, 998, 1096, 1168, 1655, 1951, 2487
FspBI CTAG 6 cut(s) 458, 1482, 1628, 1917, 2229, 2872
GlaI GCGC 2 cut(s) 261, 1179
GsaI CCCAGC 2 cut(s) 2413, 2490
GsuI CTGGAG 3 cut(s) 77, 678, 1455
HaeIII GGCC 9 cut(s) 254, 588, 717, 1440, 1562, 1887, 2006, 2327, 2374
HapII CCGG 3 cut(s) 1079, 1292, 1773
HgaI GACGC 1 cut(s) 38
HhaI GCGC 2 cut(s) 262, 1180
Hin1I GRCGYC 1 cut(s) 1582
Hin6I GCGC 2 cut(s) 260, 1178
HinP1I GCGC 2 cut(s) 260, 1178
HindIII AAGCTT 2 cut(s) 161, 1028
HinfI GANTC 8 cut(s) 88, 214, 566, 1123, 1300, 1419, 1646, 2813
HpaII CCGG 3 cut(s) 1079, 1292, 1773
HphI GGTGA 7 cut(s) 479, 503, 680, 1562, 1787, 2503, 2833
Hpy166II GTNNAC 3 cut(s) 604, 1289, 2706
Hpy188I TCNGA 9 cut(s) 93, 1095, 1327, 1677, 1864, 2137, 2280, 2562, 2739
Hpy8I GTNNAC 3 cut(s) 604, 1289, 2706
Hpy99I CGWCG 1 cut(s) 1587
HpyCH4IV ACGT 2 cut(s) 1582, 2808
HpyF3I CTNAG 7 cut(s) 92, 113, 129, 1170, 1368, 1889, 2561
HpySE526I ACGT 2 cut(s) 1582, 2808
Hsp92I GRCGYC 1 cut(s) 1582
HspAI GCGC 2 cut(s) 260, 1178
Kpn2I TCCGGA 1 cut(s) 1078
KpnI GGTACC 1 cut(s) 2169
Ksp22I TGATCA 2 cut(s) 544, 1552
Kzo9I GATC 9 cut(s) 52, 529, 544, 1075, 1165, 1552, 1672, 2493, 2578
LguI GCTCTTC 1 cut(s) 2755
LmnI GCTCC 4 cut(s) 406, 938, 1294, 1798
LweI GCATC 9 cut(s) 436, 499, 1118, 1120, 1146, 1780, 1825, 1834, 2322
MabI ACCWGGT 1 cut(s) 463
MaeI CTAG 6 cut(s) 458, 1482, 1628, 1917, 2229, 2872
MaeII ACGT 2 cut(s) 1582, 2808
MaeIII GTNAC 7 cut(s) 467, 516, 577, 898, 1377, 2338, 2804
MalI GATC 9 cut(s) 54, 531, 546, 1077, 1167, 1554, 1674, 2495, 2580
MbiI CCGCTC 2 cut(s) 2371, 2565
MboI GATC 9 cut(s) 52, 529, 544, 1075, 1165, 1552, 1672, 2493, 2578
MfeI CAATTG 4 cut(s) 873, 909, 963, 1650
MflI RGATCY 3 cut(s) 529, 1075, 2578
MhlI GDGCHC 4 cut(s) 1291, 1719, 2163, 2656
MlsI TGGCCA 2 cut(s) 254, 1562
MluNI TGGCCA 2 cut(s) 254, 1562
MlyI GAGTC 1 cut(s) 575
MmeI TCCRAC 2 cut(s) 1305, 2115
Mox20I TGGCCA 2 cut(s) 254, 1562
Mph1103I ATGCAT 1 cut(s) 1272
MroI TCCGGA 1 cut(s) 1078
MscI TGGCCA 2 cut(s) 254, 1562
MseI TTAA 5 cut(s) 140, 734, 1517, 1785, 2100
MslI CAYNNNNRTG 4 cut(s) 659, 986, 1491, 1761
Msp20I TGGCCA 2 cut(s) 254, 1562
MspA1I CMGCKG 2 cut(s) 506, 2413
MspI CCGG 3 cut(s) 1079, 1292, 1773
MspR9I CCNGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
MunI CAATTG 4 cut(s) 873, 909, 963, 1650
MvaI CCWGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
MvnI CGCG 2 cut(s) 32, 1180
NdeI CATATG 2 cut(s) 758, 2012
NdeII GATC 9 cut(s) 52, 529, 544, 1075, 1165, 1552, 1672, 2493, 2578
NlaIV GGNNCC 4 cut(s) 531, 1077, 1600, 2167
NmuCI GTSAC 4 cut(s) 467, 577, 898, 2804
NsiI ATGCAT 1 cut(s) 1272
NspI RCATGY 1 cut(s) 2660
OliI CACNNNNGTG 1 cut(s) 659
PaeR7I CTCGAG 1 cut(s) 1104
PagI TCATGA 3 cut(s) 2076, 2266, 2544
PasI CCCWGGG 1 cut(s) 590
PciSI GCTCTTC 1 cut(s) 2755
PfeI GAWTC 7 cut(s) 88, 214, 1123, 1300, 1419, 1646, 2813
PfoI TCCNGGA 1 cut(s) 1112
PinAI ACCGGT 1 cut(s) 1772
PleI GAGTC 1 cut(s) 574
PpsI GAGTC 1 cut(s) 574
Ppu21I YACGTR 1 cut(s) 2809
Psp6I CCWGG 7 cut(s) 463, 589, 829, 1112, 1401, 1882, 2374
PspFI CCCAGC 2 cut(s) 2409, 2486
PspGI CCWGG 7 cut(s) 463, 589, 829, 1112, 1401, 1882, 2374
PspN4I GGNNCC 4 cut(s) 531, 1077, 1600, 2167
PspPI GGNCC 6 cut(s) 587, 715, 1439, 2005, 2326, 2358
PspXI VCTCGAGB 1 cut(s) 1104
PstI CTGCAG 1 cut(s) 379
PsuI RGATCY 3 cut(s) 529, 1075, 2578
PvuII CAGCTG 2 cut(s) 506, 2413
RsaI GTAC 5 cut(s) 462, 605, 803, 2071, 2167
RsaNI GTAC 5 cut(s) 461, 604, 802, 2070, 2166
RseI CAYNNNNRTG 4 cut(s) 659, 986, 1491, 1761
SapI GCTCTTC 1 cut(s) 2755
SaqAI TTAA 5 cut(s) 140, 734, 1517, 1785, 2100
Sau3AI GATC 9 cut(s) 52, 529, 544, 1075, 1165, 1552, 1672, 2493, 2578
Sau96I GGNCC 6 cut(s) 587, 715, 1439, 2005, 2326, 2358
SchI GAGTC 1 cut(s) 575
ScrFI CCNGG 7 cut(s) 465, 591, 831, 1114, 1403, 1884, 2376
SduI GDGCHC 4 cut(s) 1291, 1719, 2163, 2656
SexAI ACCWGGT 1 cut(s) 463
SfaNI GCATC 9 cut(s) 436, 499, 1118, 1120, 1146, 1780, 1825, 1834, 2322
SfcI CTRYAG 3 cut(s) 375, 1146, 1392
Sfr274I CTCGAG 1 cut(s) 1104
SinI GGWCC 1 cut(s) 2358
SlaI CTCGAG 1 cut(s) 1104
SmiMI CAYNNNNRTG 4 cut(s) 659, 986, 1491, 1761
SmlI CTYRAG 3 cut(s) 164, 1104, 2252
SmoI CTYRAG 3 cut(s) 164, 1104, 2252
SpeI ACTAGT 1 cut(s) 1916
SsiI CCGC 8 cut(s) 5, 32, 365, 977, 1655, 2371, 2393, 2565
SspI AATATT 1 cut(s) 2235
SspMI CTAG 6 cut(s) 458, 1482, 1628, 1917, 2229, 2872
StyD4I CCNGG 7 cut(s) 463, 589, 829, 1112, 1401, 1882, 2374
StyI CCWWGG 2 cut(s) 411, 1481
TaiI ACGT 2 cut(s) 1585, 2811
TaqI TCGA 8 cut(s) 351, 421, 1105, 2022, 2350, 2463, 2838, 2844
TaqII GACCGA 1 cut(s) 831
TatI WGTACW 1 cut(s) 603
TauI GCSGC 3 cut(s) 1658, 2374, 2396
TfiI GAWTC 7 cut(s) 88, 214, 1123, 1300, 1419, 1646, 2813
Tru1I TTAA 5 cut(s) 140, 734, 1517, 1785, 2100
Tru9I TTAA 5 cut(s) 140, 734, 1517, 1785, 2100
TscAI CASTG 9 cut(s) 124, 648, 661, 1003, 1026, 1498, 2439, 2676, 2823
TseFI GTSAC 4 cut(s) 467, 577, 898, 2804
Tsp45I GTSAC 4 cut(s) 467, 577, 898, 2804
TspDTI ATGAA 8 cut(s) 337, 1334, 1605, 1659, 1955, 1984, 2026, 2533
TspGWI ACGGA 2 cut(s) 886, 1522
TspRI CASTG 9 cut(s) 124, 648, 661, 1003, 1026, 1498, 2439, 2676, 2823
VneI GTGCAC 1 cut(s) 1287
VpaK11BI GGWCC 1 cut(s) 2358
XapI RAATTY 2 cut(s) 748, 867
XceI RCATGY 1 cut(s) 2660
XhoI CTCGAG 1 cut(s) 1104
XmaJI CCTAGG 1 cut(s) 1481
XspI CTAG 6 cut(s) 458, 1482, 1628, 1917, 2229, 2872
ZraI GACGTC 1 cut(s) 1583
Zsp2I ATGCAT 1 cut(s) 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.