Rorug07G0033200

Late embryogenesis abundant protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
2395049 .. 2397101
2053 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0033200.1

Sequence Viewer

Length: 981 bp
ATGGCCGGCGGTGGGAGGGTCTATAGTAGTAGCGGTGGTGCCTCGTTTTTGCTTCAGAATCAGAGAGGTTCTTGCGCTCCCGAACCTCTCGATTCTCTCTTCCTTTCTGGGTCCTCTAATGCTTCCTCTACTTCTCCTTTTCTCGGTTCATCCATGATGAGTTTCGAAGGTGCTCGGGGAGGAAATGGATTGAAGAGGTCCGTGTTCCAGCAATACGAGCACGAAGACAATTGTGATGAGGAATTCGAGGAGTACTTTCACCAACCTGGAAAGAAGAGGCGGCTAACTGCTGATCAAGTCCGGTTCCTCGAGAAAAGCTTTGACTTGGAAAACAAGCTTGAACCAGAAAGGAAGATCCTGCTTGCAAAAGACCTTGGCTTGCAGCCTCGGCAGGTTGCGATTTGGTTCCAAAACCGCCGCGCAAGGTGGAAGACAAAGCAGCTGGAGAAGGACTATGATGTTTTGCAAGCCAACTATAATAGTCTCAAGGCGGATTGCGATAGCCTTTGTAAAGAGAATGATAAGCTGAAAGCTGAGGTTGTTCAGCTATCGGACAGGCTGCGGCTGAAAGATGAAGAGAGGGCAAACTCAGAACAATCGGATACGAATAAATCAAATCAAGAACCACAGCAGATGCCAATTGCTGAATCGGTCTCCTCCGAAGGTGAAGTATCCAAACTCTCGGTTGTGGCATGTAAGGAAGATCGTAGCTCAGTCAAGAGTGACATATTTGACTCGGATAGCTCACATTACACCGATGGGGTTCACTCTTCTCTCTTAGAGCGTGGTGATTCTTCATATATTTTTGAACCCGATCAGTCTGATCTTTCCCAAGATGAAGAAGACAACTTGAGCAAAACCCTATTGCCACCATACATCTTTCCGAAGCTTGAAGATGTCGATTACACAGACCCTCCTGCAAATTCATGTAATTTTGGGTTCCCAGTGGAAGATCATGCCTTTTGGTCCTGGTCTTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

326

Amino Acids

36.81

Weight (kDa)

4.75

Isoelectric Point (pI)

63.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 91 - 144 1.3e-16 Homeodomain
HALZ PF02183 146 - 187 1.7e-16 Homeobox associated leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 382
AccB1I GGYRCC 1 cut(s) 38
AccII CGCG 1 cut(s) 420
AciI CCGC 7 cut(s) 9, 33, 280, 415, 418, 491, 562
AclWI GGATC 1 cut(s) 349
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 242, 922
AcuI CTGAAG 1 cut(s) 38
AfaI GTAC 1 cut(s) 254
AfiI CCNNNNNNNGG 2 cut(s) 12, 143
AgsI TTSAA 4 cut(s) 193, 341, 809, 893
AjnI CCWGG 2 cut(s) 265, 968
AluBI AGCT 9 cut(s) 318, 337, 442, 526, 533, 547, 711, 744, 889
AluI AGCT 9 cut(s) 318, 337, 442, 526, 533, 547, 711, 744, 889
Alw21I GWGCWC 2 cut(s) 175, 222
Alw26I GTCTC 2 cut(s) 488, 658
AlwI GGATC 1 cut(s) 349
Ama87I CYCGRG 2 cut(s) 174, 308
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 3 cut(s) 382, 439, 559
ApoI RAATTY 2 cut(s) 242, 922
AspLEI GCGC 2 cut(s) 77, 422
AspS9I GGNCC 3 cut(s) 111, 198, 966
AsuHPI GGTGA 3 cut(s) 251, 677, 800
AsuII TTCGAA 1 cut(s) 165
AvaI CYCGRG 2 cut(s) 174, 308
AvaII GGWCC 3 cut(s) 111, 198, 966
BanI GGYRCC 1 cut(s) 38
BbsI GAAGAC 3 cut(s) 231, 437, 849
Bbv12I GWGCWC 2 cut(s) 175, 222
BbvCI CCTCAGC 1 cut(s) 534
BbvI GCAGC 3 cut(s) 394, 451, 546
BccI CCATC 1 cut(s) 752
BciT130I CCWGG 2 cut(s) 267, 970
BciVI GTATCC 2 cut(s) 595, 682
BclI TGATCA 1 cut(s) 292
BcoDI GTCTC 2 cut(s) 488, 658
BfaI CTAG 1 cut(s) 979
BfmI CTRYAG 1 cut(s) 22
BfuAI ACCTGC 1 cut(s) 382
BfuI GTATCC 2 cut(s) 595, 682
BisI GCNGC 6 cut(s) 281, 383, 418, 440, 560, 563
BlsI GCNGC 6 cut(s) 282, 384, 419, 441, 561, 564
BmcAI AGTACT 1 cut(s) 254
Bme1390I CCNGG 2 cut(s) 267, 970
Bme18I GGWCC 3 cut(s) 111, 198, 966
BmeT110I CYCGRG 2 cut(s) 174, 308
BmgT120I GGNCC 3 cut(s) 111, 198, 966
BmiI GGNNCC 5 cut(s) 40, 112, 305, 407, 941
BmrFI CCNGG 2 cut(s) 267, 970
BmrI ACTGGG 1 cut(s) 938
BmsI GCATC 1 cut(s) 624
BmuI ACTGGG 1 cut(s) 938
BpiI GAAGAC 3 cut(s) 231, 437, 849
BpmI CTGGAG 1 cut(s) 464
Bpu10I CCTNAGC 1 cut(s) 534
Bpu14I TTCGAA 1 cut(s) 165
BpuEI CTTGAG 2 cut(s) 470, 871
BsaI GGTCTC 1 cut(s) 658
BsaJI CCNNGG 2 cut(s) 373, 386
BsaWI WCCGGW 1 cut(s) 300
BsaXI ACNNNNNCTCC 2 cut(s) 898, 928
Bsc4I CCNNNNNNNGG 2 cut(s) 12, 143
Bse118I RCCGGY 1 cut(s) 5
Bse1I ACTGG 1 cut(s) 944
BseBI CCWGG 2 cut(s) 267, 970
BseDI CCNNGG 2 cut(s) 373, 386
BseGI GGATG 1 cut(s) 149
BseLI CCNNNNNNNGG 2 cut(s) 12, 143
BseMII CTCAG 3 cut(s) 525, 603, 726
BseNI ACTGG 1 cut(s) 944
BseRI GAGGAG 2 cut(s) 263, 646
BseXI GCAGC 3 cut(s) 394, 451, 546
Bsh1236I CGCG 1 cut(s) 420
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 38
BsiHKAI GWGCWC 2 cut(s) 175, 222
BsiHKCI CYCGRG 2 cut(s) 174, 308
BsiSI CCGG 2 cut(s) 6, 301
BslI CCNNNNNNNGG 2 cut(s) 12, 143
BsmAI GTCTC 2 cut(s) 488, 658
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 658
BsoBI CYCGRG 2 cut(s) 174, 308
Bsp119I TTCGAA 1 cut(s) 165
Bsp1286I GDGCHC 2 cut(s) 175, 222
Bsp143I GATC 6 cut(s) 292, 354, 703, 814, 823, 952
BspACI CCGC 7 cut(s) 9, 33, 280, 415, 418, 491, 562
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 3 cut(s) 526, 602, 725
BspFNI CGCG 1 cut(s) 420
BspLI GGNNCC 5 cut(s) 40, 112, 305, 407, 941
BspMI ACCTGC 1 cut(s) 382
BspPI GGATC 1 cut(s) 349
BspT104I TTCGAA 1 cut(s) 165
BspT107I GGYRCC 1 cut(s) 38
BspTNI GGTCTC 1 cut(s) 658
BsrFI RCCGGY 1 cut(s) 5
BsrI ACTGG 1 cut(s) 944
BssAI RCCGGY 1 cut(s) 5
BssECI CCNNGG 2 cut(s) 373, 386
BssMI GATC 6 cut(s) 292, 354, 703, 814, 823, 952
BssT1I CCWWGG 1 cut(s) 373
Bst2UI CCWGG 2 cut(s) 267, 970
Bst6I CTCTTC 5 cut(s) 104, 188, 269, 570, 775
BstBI TTCGAA 1 cut(s) 165
BstC8I GCNNGC 4 cut(s) 7, 363, 380, 468
BstDEI CTNAG 4 cut(s) 534, 589, 712, 778
BstF5I GGATG 1 cut(s) 149
BstFNI CGCG 1 cut(s) 420
BstHHI GCGC 2 cut(s) 77, 422
BstKTI GATC 6 cut(s) 295, 357, 706, 817, 826, 955
BstMAI GTCTC 2 cut(s) 488, 658
BstMBI GATC 6 cut(s) 292, 354, 703, 814, 823, 952
BstMWI GCNNNNNNNGC 2 cut(s) 217, 388
BstNI CCWGG 2 cut(s) 267, 970
BstNSI RCATGY 1 cut(s) 696
BstSCI CCNGG 2 cut(s) 265, 968
BstSFI CTRYAG 1 cut(s) 22
BstUI CGCG 1 cut(s) 420
BstV1I GCAGC 3 cut(s) 394, 451, 546
BstV2I GAAGAC 3 cut(s) 231, 437, 849
BstX2I RGATCY 1 cut(s) 354
BstYI RGATCY 1 cut(s) 354
BsuI GTATCC 2 cut(s) 595, 682
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 1 cut(s) 149
BtsIMutI CAGTG 1 cut(s) 951
BveI ACCTGC 1 cut(s) 382
Cac8I GCNNGC 4 cut(s) 7, 363, 380, 468
CfoI GCGC 2 cut(s) 77, 422
Cfr10I RCCGGY 1 cut(s) 5
Cfr13I GGNCC 3 cut(s) 111, 198, 966
Csp6I GTAC 1 cut(s) 253
CviAII CATG 4 cut(s) 154, 693, 927, 956
CviQI GTAC 1 cut(s) 253
DdeI CTNAG 4 cut(s) 534, 589, 712, 778
DpnI GATC 6 cut(s) 294, 356, 705, 816, 825, 954
DpnII GATC 6 cut(s) 292, 354, 703, 814, 823, 952
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 5 cut(s) 104, 188, 269, 570, 775
EarI CTCTTC 5 cut(s) 104, 188, 269, 570, 775
EciI GGCGGA 1 cut(s) 506
Eco130I CCWWGG 1 cut(s) 373
Eco31I GGTCTC 1 cut(s) 658
Eco47I GGWCC 3 cut(s) 111, 198, 966
Eco57I CTGAAG 1 cut(s) 38
Eco88I CYCGRG 2 cut(s) 174, 308
EcoO109I RGGNCCY 1 cut(s) 111
EcoRI GAATTC 1 cut(s) 242
EcoRII CCWGG 2 cut(s) 265, 968
EcoT14I CCWWGG 1 cut(s) 373
ErhI CCWWGG 1 cut(s) 373
FaeI CATG 4 cut(s) 157, 696, 930, 959
FatI CATG 4 cut(s) 153, 692, 926, 955
FbaI TGATCA 1 cut(s) 292
Fnu4HI GCNGC 6 cut(s) 281, 383, 418, 440, 560, 563
FokI GGATG 1 cut(s) 136
Fsp4HI GCNGC 6 cut(s) 281, 383, 418, 440, 560, 563
FspBI CTAG 1 cut(s) 979
GlaI GCGC 2 cut(s) 76, 421
GluI GCNGC 6 cut(s) 281, 383, 418, 440, 560, 563
GsuI CTGGAG 1 cut(s) 464
HaeIII GGCC 1 cut(s) 5
HapII CCGG 2 cut(s) 6, 301
HhaI GCGC 2 cut(s) 77, 422
Hin1II CATG 4 cut(s) 157, 696, 930, 959
Hin6I GCGC 2 cut(s) 75, 420
HinP1I GCGC 2 cut(s) 75, 420
HindIII AAGCTT 3 cut(s) 316, 335, 887
HinfI GANTC 5 cut(s) 58, 92, 647, 734, 791
HpaII CCGG 2 cut(s) 6, 301
HphI GGTGA 3 cut(s) 251, 677, 800
Hpy166II GTNNAC 1 cut(s) 766
Hpy188I TCNGA 9 cut(s) 57, 63, 553, 592, 601, 661, 739, 823, 885
Hpy188III TCNNGA 5 cut(s) 80, 89, 310, 620, 718
Hpy8I GTNNAC 1 cut(s) 766
HpyAV CCTTC 3 cut(s) 161, 442, 656
HpyCH4V TGCA 4 cut(s) 365, 382, 466, 920
HpyF10VI GCNNNNNNNGC 2 cut(s) 217, 388
HpyF3I CTNAG 4 cut(s) 534, 589, 712, 778
Hsp92II CATG 4 cut(s) 157, 696, 930, 959
HspAI GCGC 2 cut(s) 75, 420
KroI GCCGGC 1 cut(s) 5
KroNI GCCGGC 1 cut(s) 7
Ksp22I TGATCA 1 cut(s) 292
Kzo9I GATC 6 cut(s) 292, 354, 703, 814, 823, 952
LmnI GCTCC 1 cut(s) 82
Lsp1109I GCAGC 3 cut(s) 394, 451, 546
LweI GCATC 1 cut(s) 624
MaeI CTAG 1 cut(s) 979
MaeIII GTNAC 1 cut(s) 722
MalI GATC 6 cut(s) 294, 356, 705, 816, 825, 954
MboI GATC 6 cut(s) 292, 354, 703, 814, 823, 952
MfeI CAATTG 2 cut(s) 229, 639
MflI RGATCY 1 cut(s) 354
MhlI GDGCHC 2 cut(s) 175, 222
MluCI AATT 5 cut(s) 229, 242, 639, 922, 931
MlyI GAGTC 1 cut(s) 728
MroNI GCCGGC 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 442
MspI CCGG 2 cut(s) 6, 301
MspR9I CCNGG 2 cut(s) 267, 970
MunI CAATTG 2 cut(s) 229, 639
MvaI CCWGG 2 cut(s) 267, 970
MvnI CGCG 1 cut(s) 420
MwoI GCNNNNNNNGC 2 cut(s) 217, 388
NaeI GCCGGC 1 cut(s) 7
NdeII GATC 6 cut(s) 292, 354, 703, 814, 823, 952
NgoMIV GCCGGC 1 cut(s) 5
NlaIII CATG 4 cut(s) 157, 696, 930, 959
NlaIV GGNNCC 5 cut(s) 40, 112, 305, 407, 941
NmeAIII GCCGAG 1 cut(s) 367
NmuCI GTSAC 1 cut(s) 722
NspI RCATGY 1 cut(s) 696
NspV TTCGAA 1 cut(s) 165
PaeR7I CTCGAG 1 cut(s) 308
PdiI GCCGGC 1 cut(s) 7
PfeI GAWTC 4 cut(s) 58, 92, 647, 791
PkrI GCNGC 6 cut(s) 282, 384, 419, 441, 561, 564
PleI GAGTC 1 cut(s) 728
PpsI GAGTC 1 cut(s) 728
PpuMI RGGWCCY 1 cut(s) 111
Psp5II RGGWCCY 1 cut(s) 111
Psp6I CCWGG 2 cut(s) 265, 968
PspGI CCWGG 2 cut(s) 265, 968
PspN4I GGNNCC 5 cut(s) 40, 112, 305, 407, 941
PspPI GGNCC 3 cut(s) 111, 198, 966
PspPPI RGGWCCY 1 cut(s) 111
PsuI RGATCY 1 cut(s) 354
PvuII CAGCTG 1 cut(s) 442
RsaI GTAC 1 cut(s) 254
RsaNI GTAC 1 cut(s) 253
SatI GCNGC 6 cut(s) 281, 383, 418, 440, 560, 563
Sau3AI GATC 6 cut(s) 292, 354, 703, 814, 823, 952
Sau96I GGNCC 3 cut(s) 111, 198, 966
ScaI AGTACT 1 cut(s) 254
SchI GAGTC 1 cut(s) 728
ScrFI CCNGG 2 cut(s) 267, 970
SduI GDGCHC 2 cut(s) 175, 222
SfaNI GCATC 1 cut(s) 624
SfcI CTRYAG 1 cut(s) 22
Sfr274I CTCGAG 1 cut(s) 308
SfuI TTCGAA 1 cut(s) 165
SinI GGWCC 3 cut(s) 111, 198, 966
SlaI CTCGAG 1 cut(s) 308
SmlI CTYRAG 3 cut(s) 308, 485, 850
SmoI CTYRAG 3 cut(s) 308, 485, 850
Sse9I AATT 5 cut(s) 229, 242, 639, 922, 931
SsiI CCGC 7 cut(s) 9, 33, 280, 415, 418, 491, 562
SspMI CTAG 1 cut(s) 979
StyD4I CCNGG 2 cut(s) 265, 968
StyI CCWWGG 1 cut(s) 373
TaqI TCGA 5 cut(s) 90, 165, 246, 309, 900
TaqII GACCGA 1 cut(s) 640
TasI AATT 5 cut(s) 229, 242, 639, 922, 931
TatI WGTACW 1 cut(s) 252
TauI GCSGC 3 cut(s) 283, 420, 565
TfiI GAWTC 4 cut(s) 58, 92, 647, 791
TscAI CASTG 1 cut(s) 951
TseFI GTSAC 1 cut(s) 722
TseI GCWGC 3 cut(s) 382, 439, 559
Tsp45I GTSAC 1 cut(s) 722
TspDTI ATGAA 5 cut(s) 138, 588, 786, 852, 915
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 1 cut(s) 951
VpaK11BI GGWCC 3 cut(s) 111, 198, 966
XapI RAATTY 2 cut(s) 242, 922
XceI RCATGY 1 cut(s) 696
XhoI CTCGAG 1 cut(s) 308
XspI CTAG 1 cut(s) 979
ZrmI AGTACT 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.