Rorug07G0032800

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000065
Physical Location & Seq
Forward (+)
2356985 .. 2371220
14236 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0032800.1

Sequence Viewer

Length: 894 bp
ATGGCGTCGTTCGCTGAAGCTCCATCGGGAGATGCCAAGGCTGGAGAGAAGATCTTCAAGACCAAGTGCGCTCAGTGCCACACCGTCGACAAAGGCGCCGGCCACAAGCAGGAACTGACGCTCAAGAAGAAGCTTCAAGACAAGGTGGCAATAGTCACCGGTGGCGCTAGCGGGATAGGTGAAGCCACTGCGCGGCTCTTTTCTTTGCATGGTGCGCTTGCAGTGGTGATCGCCGACGTCCAGGACGATAAGGGCCAGGACGTAGCAGCTTCCATTGGCGCTCACTGCAGCTACATCCACTGCGACGTGAGCGACGAGGACCAGGTCAAGAGCCTGGTCGAGTCAACCGTCCAGACGCACGGCCGTCTGGACATCATGTTCAGCAACGCCGGAATAATCAGCAAATCCAAGCAGGAGGTTCTGGACCTTGACTTGTCCAACTACGACAAGCTGATGGCGGTCAACGTACGCGGGACGGCGGCCTGTGTGAAGCATGCGGCCAAGGCCATGGTGGAAGGCGGAGTGAGGGGGAGCGTGATATGCACGGCGAGCGTTGGGGCAACTAAGGGGACGGATATTTTCACCGACTACACCATGTCAAAGCACGCCATTTTGGGGCTGATGAGGTGCGCGAGTATACAGCTCGCGCCGCACCGGATAAGCGTGAACTGCGTATCGCCGGGGCCGACGCTGACGCCGATCATGAACTCCTCTACTTTTCAGTTTGAGAGTCAGGAAGAGGTAGATAAGCTGCAGTCGACACTAGGGTTGAAAGGAGGCAAGGACGTGATGACGCCGGAGCATGTGGCCAGCGCCGTCGTTTATTTAGCTTCCGAGGACTCTCCGTTTGTGAGTGGCCATAATTTGGTCCTCGACGGTGGATTCAAAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

297

Amino Acids

31.2

Weight (kDa)

6.25

Isoelectric Point (pI)

27.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 48 - 238 2e-45 short chain dehydrogenase
KR PF08659 51 - 199 5.6e-10 KR domain
adh_short_C2 PF13561 56 - 295 8e-59 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 240
AccB1I GGYRCC 1 cut(s) 95
AccB7I CCANNNNNTGG 1 cut(s) 865
AccI GTMKAC 3 cut(s) 87, 637, 758
AccII CGCG 4 cut(s) 193, 471, 632, 647
AciI CCGC 8 cut(s) 171, 193, 458, 471, 479, 497, 519, 650
AcoI YGGCCR 5 cut(s) 100, 361, 498, 807, 856
AcuI CTGAAG 1 cut(s) 36
AcyI GRCGYC 5 cut(s) 5, 96, 237, 695, 794
AfaI GTAC 1 cut(s) 468
AfiI CCNNNNNNNGG 4 cut(s) 109, 192, 615, 865
AgeI ACCGGT 1 cut(s) 158
AgsI TTSAA 4 cut(s) 58, 137, 772, 886
AjiI CACGTC 2 cut(s) 307, 787
AjnI CCWGG 4 cut(s) 240, 255, 321, 333
AloI GAACNNNNNNTCC 2 cut(s) 362, 394
AluBI AGCT 8 cut(s) 20, 133, 269, 291, 451, 643, 751, 830
AluI AGCT 8 cut(s) 20, 133, 269, 291, 451, 643, 751, 830
AlwNI CAGNNNCTG 1 cut(s) 115
AoxI GGCC 9 cut(s) 100, 253, 361, 480, 498, 504, 683, 807, 856
ApeKI GCWGC 3 cut(s) 266, 288, 751
ArsI GACNNNNNNTTYG 2 cut(s) 830, 862
AsiGI ACCGGT 1 cut(s) 158
Asp700I GAANNNNTTC 1 cut(s) 53
AspLEI GCGC 9 cut(s) 71, 98, 167, 193, 217, 281, 632, 649, 815
AspS9I GGNCC 5 cut(s) 253, 319, 424, 683, 868
AsuC2I CCSGG 1 cut(s) 681
AsuHPI GGTGA 4 cut(s) 148, 191, 238, 574
AsuNHI GCTAGC 1 cut(s) 167
AvaII GGWCC 3 cut(s) 319, 424, 868
BalI TGGCCA 2 cut(s) 809, 858
BanI GGYRCC 1 cut(s) 95
BbvI GCAGC 3 cut(s) 278, 300, 738
BccI CCATC 2 cut(s) 31, 448
BceAI ACGGC 5 cut(s) 348, 376, 492, 561, 800
BciT130I CCWGG 4 cut(s) 242, 257, 323, 335
BcnI CCSGG 1 cut(s) 681
BfaI CTAG 2 cut(s) 168, 764
BfmI CTRYAG 2 cut(s) 286, 752
BfoI RGCGCY 4 cut(s) 99, 168, 282, 816
BglII AGATCT 1 cut(s) 51
BisI GCNGC 7 cut(s) 194, 267, 289, 480, 498, 650, 752
BlsI GCNGC 7 cut(s) 195, 268, 290, 481, 499, 651, 753
Bme1390I CCNGG 5 cut(s) 242, 257, 323, 335, 681
Bme18I GGWCC 3 cut(s) 319, 424, 868
BmgBI CACGTC 2 cut(s) 307, 787
BmgT120I GGNCC 5 cut(s) 253, 319, 424, 683, 868
BmiI GGNNCC 2 cut(s) 97, 684
BmrFI CCNGG 5 cut(s) 242, 257, 323, 335, 681
BmsI GCATC 1 cut(s) 22
BmtI GCTAGC 1 cut(s) 171
BpmI CTGGAG 1 cut(s) 63
BpuEI CTTGAG 1 cut(s) 107
BpuMI CCSGG 1 cut(s) 681
BsaHI GRCGYC 5 cut(s) 5, 96, 237, 695, 794
BsaJI CCNNGG 5 cut(s) 36, 501, 507, 680, 834
BsaWI WCCGGW 2 cut(s) 158, 654
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 192, 615, 865
Bse118I RCCGGY 2 cut(s) 98, 158
BseBI CCWGG 4 cut(s) 242, 257, 323, 335
BseDI CCNNGG 5 cut(s) 36, 501, 507, 680, 834
BseGI GGATG 1 cut(s) 294
BseLI CCNNNNNNNGG 4 cut(s) 109, 192, 615, 865
BseMII CTCAG 1 cut(s) 86
BseRI GAGGAG 1 cut(s) 700
BseX3I CGGCCG 1 cut(s) 361
BseXI GCAGC 3 cut(s) 278, 300, 738
Bsh1236I CGCG 4 cut(s) 193, 471, 632, 647
Bsh1285I CGRYCG 1 cut(s) 364
BshFI GGCC 9 cut(s) 102, 255, 363, 482, 500, 506, 685, 809, 858
BshNI GGYRCC 1 cut(s) 95
BshTI ACCGGT 1 cut(s) 158
BsiEI CGRYCG 1 cut(s) 364
BsiSI CCGG 6 cut(s) 99, 159, 390, 655, 680, 797
BsiWI CGTACG 1 cut(s) 466
BslFI GGGAC 2 cut(s) 487, 583
BslI CCNNNNNNNGG 4 cut(s) 109, 192, 615, 865
BsmFI GGGAC 2 cut(s) 487, 583
BsnI GGCC 9 cut(s) 102, 255, 363, 482, 500, 506, 685, 809, 858
Bsp143I GATC 3 cut(s) 51, 228, 699
Bsp19I CCATGG 1 cut(s) 507
BspACI CCGC 8 cut(s) 171, 193, 458, 471, 479, 497, 519, 650
BspANI GGCC 9 cut(s) 102, 255, 363, 482, 500, 506, 685, 809, 858
BspCNI CTCAG 1 cut(s) 85
BspFNI CGCG 4 cut(s) 193, 471, 632, 647
BspHI TCATGA 1 cut(s) 702
BspLI GGNNCC 2 cut(s) 97, 684
BspMAI CTGCAG 2 cut(s) 290, 756
BspOI GCTAGC 1 cut(s) 171
BspT107I GGYRCC 1 cut(s) 95
BsrFI RCCGGY 2 cut(s) 98, 158
BssAI RCCGGY 2 cut(s) 98, 158
BssECI CCNNGG 5 cut(s) 36, 501, 507, 680, 834
BssMI GATC 3 cut(s) 51, 228, 699
BssNAI GTATAC 1 cut(s) 638
BssNI GRCGYC 5 cut(s) 5, 96, 237, 695, 794
BssT1I CCWWGG 3 cut(s) 36, 501, 507
Bst1107I GTATAC 1 cut(s) 638
Bst2UI CCWGG 4 cut(s) 242, 257, 323, 335
Bst4CI ACNGT 3 cut(s) 85, 349, 878
Bst6I CTCTTC 1 cut(s) 732
BstACI GRCGYC 5 cut(s) 5, 96, 237, 695, 794
BstC8I GCNNGC 8 cut(s) 100, 169, 219, 495, 550, 606, 645, 811
BstDEI CTNAG 2 cut(s) 72, 564
BstDSI CCRYGG 1 cut(s) 507
BstF5I GGATG 1 cut(s) 294
BstFNI CGCG 4 cut(s) 193, 471, 632, 647
BstH2I RGCGCY 4 cut(s) 99, 168, 282, 816
BstHHI GCGC 9 cut(s) 71, 98, 167, 193, 217, 281, 632, 649, 815
BstKTI GATC 3 cut(s) 54, 231, 702
BstMBI GATC 3 cut(s) 51, 228, 699
BstMCI CGRYCG 1 cut(s) 364
BstNI CCWGG 4 cut(s) 242, 257, 323, 335
BstNSI RCATGY 2 cut(s) 497, 806
BstSCI CCNGG 5 cut(s) 240, 255, 321, 333, 679
BstSFI CTRYAG 2 cut(s) 286, 752
BstUI CGCG 4 cut(s) 193, 471, 632, 647
BstV1I GCAGC 3 cut(s) 278, 300, 738
BstX2I RGATCY 1 cut(s) 51
BstXI CCANNNNNNTGG 1 cut(s) 508
BstYI RGATCY 1 cut(s) 51
BstZ17I GTATAC 1 cut(s) 638
BstZI CGGCCG 1 cut(s) 361
BsuRI GGCC 9 cut(s) 102, 255, 363, 482, 500, 506, 685, 809, 858
BtgI CCRYGG 1 cut(s) 507
BtrI CACGTC 2 cut(s) 307, 787
BtsCI GGATG 1 cut(s) 294
BtsI GCAGTG 4 cut(s) 186, 228, 283, 298
BtsIMutI CAGTG 5 cut(s) 80, 186, 228, 283, 298
Cac8I GCNNGC 8 cut(s) 100, 169, 219, 495, 550, 606, 645, 811
CaiI CAGNNNCTG 1 cut(s) 115
CciI TCATGA 1 cut(s) 702
CfoI GCGC 9 cut(s) 71, 98, 167, 193, 217, 281, 632, 649, 815
Cfr10I RCCGGY 2 cut(s) 98, 158
Cfr13I GGNCC 5 cut(s) 253, 319, 424, 683, 868
CseI GACGC 5 cut(s) 127, 364, 697, 703, 802
CsiI ACCWGGT 1 cut(s) 321
Csp6I GTAC 1 cut(s) 467
CspAI ACCGGT 1 cut(s) 158
CviAII CATG 7 cut(s) 209, 376, 494, 508, 595, 703, 803
CviQI GTAC 1 cut(s) 467
DdeI CTNAG 2 cut(s) 72, 564
DinI GGCGCC 1 cut(s) 97
DpnI GATC 3 cut(s) 53, 230, 701
DpnII GATC 3 cut(s) 51, 228, 699
EaeI YGGCCR 5 cut(s) 100, 361, 498, 807, 856
EagI CGGCCG 1 cut(s) 361
Eam1104I CTCTTC 1 cut(s) 732
EarI CTCTTC 1 cut(s) 732
EciI GGCGGA 1 cut(s) 534
EclXI CGGCCG 1 cut(s) 361
Eco130I CCWWGG 3 cut(s) 36, 501, 507
Eco47I GGWCC 3 cut(s) 319, 424, 868
Eco52I CGGCCG 1 cut(s) 361
Eco57I CTGAAG 1 cut(s) 36
EcoRII CCWGG 4 cut(s) 240, 255, 321, 333
EcoT14I CCWWGG 3 cut(s) 36, 501, 507
EgeI GGCGCC 1 cut(s) 97
EheI GGCGCC 1 cut(s) 97
ErhI CCWWGG 3 cut(s) 36, 501, 507
FaeI CATG 7 cut(s) 212, 379, 497, 511, 598, 706, 806
FaqI GGGAC 2 cut(s) 487, 583
FatI CATG 7 cut(s) 208, 375, 493, 507, 594, 702, 802
FauI CCCGC 2 cut(s) 164, 464
FblI GTMKAC 3 cut(s) 87, 637, 758
Fnu4HI GCNGC 7 cut(s) 194, 267, 289, 480, 498, 650, 752
FokI GGATG 1 cut(s) 281
Fsp4HI GCNGC 7 cut(s) 194, 267, 289, 480, 498, 650, 752
FspBI CTAG 2 cut(s) 168, 764
GlaI GCGC 9 cut(s) 70, 97, 166, 192, 216, 280, 631, 648, 814
GluI GCNGC 7 cut(s) 194, 267, 289, 480, 498, 650, 752
GsuI CTGGAG 1 cut(s) 63
HaeII RGCGCY 4 cut(s) 99, 168, 282, 816
HaeIII GGCC 9 cut(s) 102, 255, 363, 482, 500, 506, 685, 809, 858
HapII CCGG 6 cut(s) 99, 159, 390, 655, 680, 797
HgaI GACGC 5 cut(s) 127, 364, 697, 703, 802
HhaI GCGC 9 cut(s) 71, 98, 167, 193, 217, 281, 632, 649, 815
Hin1I GRCGYC 5 cut(s) 5, 96, 237, 695, 794
Hin1II CATG 7 cut(s) 212, 379, 497, 511, 598, 706, 806
Hin6I GCGC 9 cut(s) 69, 96, 165, 191, 215, 279, 630, 647, 813
HinP1I GCGC 9 cut(s) 69, 96, 165, 191, 215, 279, 630, 647, 813
HincII GTYRAC 4 cut(s) 88, 345, 463, 759
HindII GTYRAC 4 cut(s) 88, 345, 463, 759
HindIII AAGCTT 1 cut(s) 131
HinfI GANTC 4 cut(s) 341, 730, 839, 882
HpaII CCGG 6 cut(s) 99, 159, 390, 655, 680, 797
HphI GGTGA 4 cut(s) 148, 191, 238, 574
Hpy166II GTNNAC 6 cut(s) 88, 345, 463, 638, 667, 759
Hpy188I TCNGA 1 cut(s) 835
Hpy8I GTNNAC 6 cut(s) 88, 345, 463, 638, 667, 759
Hpy99I CGWCG 8 cut(s) 10, 89, 239, 308, 317, 691, 821, 878
HpyAV CCTTC 1 cut(s) 509
HpyCH4III ACNGT 3 cut(s) 85, 349, 878
HpyCH4IV ACGT 5 cut(s) 237, 261, 306, 465, 786
HpyCH4V TGCA 5 cut(s) 208, 221, 288, 543, 754
HpyF3I CTNAG 2 cut(s) 72, 564
HpySE526I ACGT 5 cut(s) 237, 261, 306, 465, 786
Hsp92I GRCGYC 5 cut(s) 5, 96, 237, 695, 794
Hsp92II CATG 7 cut(s) 212, 379, 497, 511, 598, 706, 806
HspAI GCGC 9 cut(s) 69, 96, 165, 191, 215, 279, 630, 647, 813
KasI GGCGCC 1 cut(s) 95
KroI GCCGGC 1 cut(s) 98
KroNI GCCGGC 1 cut(s) 100
Kzo9I GATC 3 cut(s) 51, 228, 699
LmnI GCTCC 3 cut(s) 25, 531, 799
Lsp1109I GCAGC 3 cut(s) 278, 300, 738
LweI GCATC 1 cut(s) 22
MabI ACCWGGT 1 cut(s) 321
MaeI CTAG 2 cut(s) 168, 764
MaeII ACGT 5 cut(s) 237, 261, 306, 465, 786
MaeIII GTNAC 1 cut(s) 154
MalI GATC 3 cut(s) 53, 230, 701
MboI GATC 3 cut(s) 51, 228, 699
MboII GAAGA 4 cut(s) 46, 61, 139, 749
MflI RGATCY 1 cut(s) 51
MlsI TGGCCA 2 cut(s) 809, 858
MluCI AATT 1 cut(s) 862
MluNI TGGCCA 2 cut(s) 809, 858
Mly113I GGCGCC 1 cut(s) 96
MlyI GAGTC 3 cut(s) 350, 739, 833
MmeI TCCRAC 1 cut(s) 462
MnlI CCTC 9 cut(s) 310, 409, 519, 618, 721, 733, 770, 829, 881
Mox20I TGGCCA 2 cut(s) 809, 858
MroNI GCCGGC 1 cut(s) 98
MroXI GAANNNNTTC 1 cut(s) 53
MscI TGGCCA 2 cut(s) 809, 858
Msp20I TGGCCA 2 cut(s) 809, 858
MspI CCGG 6 cut(s) 99, 159, 390, 655, 680, 797
MspR9I CCNGG 5 cut(s) 242, 257, 323, 335, 681
MvaI CCWGG 4 cut(s) 242, 257, 323, 335
MvnI CGCG 4 cut(s) 193, 471, 632, 647
NaeI GCCGGC 1 cut(s) 100
NarI GGCGCC 1 cut(s) 96
NciI CCSGG 1 cut(s) 681
NcoI CCATGG 1 cut(s) 507
NdeII GATC 3 cut(s) 51, 228, 699
NgoMIV GCCGGC 1 cut(s) 98
NheI GCTAGC 1 cut(s) 167
NlaIII CATG 7 cut(s) 212, 379, 497, 511, 598, 706, 806
NlaIV GGNNCC 2 cut(s) 97, 684
NmuCI GTSAC 1 cut(s) 154
NspI RCATGY 2 cut(s) 497, 806
PaeI GCATGC 1 cut(s) 497
PagI TCATGA 1 cut(s) 702
PcsI WCGNNNNNNNCGW 5 cut(s) 243, 312, 345, 683, 695
PdiI GCCGGC 1 cut(s) 100
PdmI GAANNNNTTC 1 cut(s) 53
PfeI GAWTC 1 cut(s) 882
Pfl23II CGTACG 1 cut(s) 466
PflFI GACNNNGTC 1 cut(s) 323
PflMI CCANNNNNTGG 1 cut(s) 865
PfoI TCCNGGA 1 cut(s) 240
PinAI ACCGGT 1 cut(s) 158
PkrI GCNGC 7 cut(s) 195, 268, 290, 481, 499, 651, 753
PleI GAGTC 3 cut(s) 349, 738, 833
PluTI GGCGCC 1 cut(s) 99
PpsI GAGTC 3 cut(s) 349, 738, 833
Psp6I CCWGG 4 cut(s) 240, 255, 321, 333
PspGI CCWGG 4 cut(s) 240, 255, 321, 333
PspLI CGTACG 1 cut(s) 466
PspN4I GGNNCC 2 cut(s) 97, 684
PspPI GGNCC 5 cut(s) 253, 319, 424, 683, 868
PstI CTGCAG 2 cut(s) 290, 756
PstNI CAGNNNCTG 1 cut(s) 115
PsuI RGATCY 1 cut(s) 51
PsyI GACNNNGTC 1 cut(s) 323
RsaI GTAC 1 cut(s) 468
RsaNI GTAC 1 cut(s) 467
SalI GTCGAC 2 cut(s) 86, 757
SatI GCNGC 7 cut(s) 194, 267, 289, 480, 498, 650, 752
Sau3AI GATC 3 cut(s) 51, 228, 699
Sau96I GGNCC 5 cut(s) 253, 319, 424, 683, 868
SchI GAGTC 3 cut(s) 350, 739, 833
ScrFI CCNGG 5 cut(s) 242, 257, 323, 335, 681
SexAI ACCWGGT 1 cut(s) 321
SfaNI GCATC 1 cut(s) 22
SfcI CTRYAG 2 cut(s) 286, 752
SfoI GGCGCC 1 cut(s) 97
SgrAI CRCCGGYG 1 cut(s) 158
SinI GGWCC 3 cut(s) 319, 424, 868
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
SphI GCATGC 1 cut(s) 497
Sse9I AATT 1 cut(s) 862
SsiI CCGC 8 cut(s) 171, 193, 458, 471, 479, 497, 519, 650
SspDI GGCGCC 1 cut(s) 95
SspMI CTAG 2 cut(s) 168, 764
StyD4I CCNGG 5 cut(s) 240, 255, 321, 333, 679
StyI CCWWGG 3 cut(s) 36, 501, 507
TaaI ACNGT 3 cut(s) 85, 349, 878
TaiI ACGT 5 cut(s) 240, 264, 309, 468, 789
TaqI TCGA 4 cut(s) 87, 339, 758, 873
TasI AATT 1 cut(s) 862
TauI GCSGC 4 cut(s) 196, 482, 500, 652
TfiI GAWTC 1 cut(s) 882
TscAI CASTG 5 cut(s) 80, 193, 228, 290, 305
TseFI GTSAC 1 cut(s) 154
TseI GCWGC 3 cut(s) 266, 288, 751
Tsp45I GTSAC 1 cut(s) 154
TspDTI ATGAA 1 cut(s) 719
TspGWI ACGGA 2 cut(s) 587, 834
TspRI CASTG 5 cut(s) 80, 193, 228, 290, 305
Tth111I GACNNNGTC 1 cut(s) 323
Van91I CCANNNNNTGG 1 cut(s) 865
VpaK11BI GGWCC 3 cut(s) 319, 424, 868
XceI RCATGY 2 cut(s) 497, 806
XcmI CCANNNNNNNNNTGG 1 cut(s) 508
XmiI GTMKAC 3 cut(s) 87, 637, 758
XmnI GAANNNNTTC 1 cut(s) 53
XspI CTAG 2 cut(s) 168, 764
ZraI GACGTC 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.