RchiOBHm_Chr1g0379411

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000065
Physical Location & Seq
Forward (+)
65476700 .. 65477391
692 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60275

Sequence Viewer

Length: 666 bp
ATGGCAGAGAACAATAAGGAAGCAACATCTCCTTATCCGTTGATGCCCTCCGCCCCCAGCTACATGAGGAGCGATCAGGAAGCCGCGGTGTCCGCTCCGCCTAGCGCGGAGGAGCTTCGTCACAAGAAGCGCATGAGGCGCCTTCTCTACGTAGCTATCTTCGCCGTGTTCCAAGTCGTAGTGATAACAGTGTTTGCACTCACCGTGATGAAAATCAAGAGCCCCAAATTCCGGATCCGGACGGCGTCGATCACTGACTTTGAAGTCGGCAGCGCCACGAGTCCGTCGTTTGATTTGGAAATGGACGTTCATTTTGGGGTGAAGAACACCAACTTTGGTCACTTCGAGTATGAAGATGGAATCGTTGTGTTTTCGTACGGAGGTGTGAGAATTGGACAGGCCAATGTGGAGGAGGCACGTGTCAGGGCAAGATCGACCAGGAAGGTGGACGTCTCATCGGTGAACTTGACTTCGAAAGGTTTGCCGGCAAACTCACCGTTGGGGAGTGATATTAGTAGGGGGATTATTCCGATTACGACGTCCTCAAAGTTAGATGGGAAGATTCATCTGATGAAGGTGATCAAGAAGAAGAAGTCTGCTCAGATGAATTGCACCATGGAAGTTGTTCTTGCCACAAAGTCTGTTCAAAATGTCGTATGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

221

Amino Acids

24.32

Weight (kDa)

9.75

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 105 - 205 2.1e-07 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 263
AatII GACGTC 2 cut(s) 453, 542
AccB1I GGYRCC 1 cut(s) 138
AccBSI CCGCTC 1 cut(s) 95
AccII CGCG 2 cut(s) 86, 107
AccIII TCCGGA 2 cut(s) 231, 237
AciI CCGC 6 cut(s) 51, 84, 86, 93, 98, 107
AclWI GGATC 2 cut(s) 229, 242
AcsI RAATTY 1 cut(s) 227
AcvI CACGTG 1 cut(s) 419
AcyI GRCGYC 4 cut(s) 139, 245, 450, 539
AfaI GTAC 1 cut(s) 377
AfiI CCNNNNNNNGG 1 cut(s) 231
AflIII ACRYGT 1 cut(s) 418
AgsI TTSAA 2 cut(s) 263, 647
AjnI CCWGG 1 cut(s) 437
AluBI AGCT 3 cut(s) 60, 115, 155
AluI AGCT 3 cut(s) 60, 115, 155
Alw26I GTCTC 1 cut(s) 457
AlwI GGATC 2 cut(s) 229, 242
Aor13HI TCCGGA 2 cut(s) 231, 237
AoxI GGCC 1 cut(s) 399
ApeKI GCWGC 1 cut(s) 270
ApoI RAATTY 1 cut(s) 227
ArsI GACNNNNNNTTYG 2 cut(s) 296, 328
Asp700I GAANNNNTTC 1 cut(s) 624
AspLEI GCGC 4 cut(s) 107, 132, 141, 275
AsuHPI GGTGA 5 cut(s) 193, 331, 472, 486, 589
AsuII TTCGAA 1 cut(s) 473
BamHI GGATCC 1 cut(s) 234
BanI GGYRCC 1 cut(s) 138
BanII GRGCYC 1 cut(s) 224
BauI CACGAG 1 cut(s) 277
BbrPI CACGTG 1 cut(s) 419
BbvI GCAGC 1 cut(s) 282
BccI CCATC 2 cut(s) 350, 548
BceAI ACGGC 2 cut(s) 149, 258
BcgI CGANNNNNNTGC 2 cut(s) 463, 497
BciT130I CCWGG 1 cut(s) 439
BclI TGATCA 1 cut(s) 579
BcoDI GTCTC 1 cut(s) 457
BfaI CTAG 1 cut(s) 102
BfoI RGCGCY 2 cut(s) 142, 276
BisI GCNGC 2 cut(s) 84, 271
BlsI GCNGC 2 cut(s) 85, 272
Bme1390I CCNGG 1 cut(s) 439
BmiI GGNNCC 2 cut(s) 140, 236
BmrFI CCNGG 1 cut(s) 439
BmsI GCATC 1 cut(s) 33
Bpu14I TTCGAA 1 cut(s) 473
BsaAI YACGTR 2 cut(s) 151, 419
BsaBI GATNNNNATC 1 cut(s) 212
BsaHI GRCGYC 4 cut(s) 139, 245, 450, 539
BsaJI CCNNGG 2 cut(s) 84, 615
BsaWI WCCGGW 2 cut(s) 231, 237
Bsc4I CCNNNNNNNGG 1 cut(s) 231
Bse118I RCCGGY 1 cut(s) 484
Bse8I GATNNNNATC 1 cut(s) 212
BseAI TCCGGA 2 cut(s) 231, 237
BseBI CCWGG 1 cut(s) 439
BseDI CCNNGG 2 cut(s) 84, 615
BseJI GATNNNNATC 1 cut(s) 212
BseLI CCNNNNNNNGG 1 cut(s) 231
BseMII CTCAG 1 cut(s) 614
BseRI GAGGAG 3 cut(s) 82, 125, 425
BseXI GCAGC 1 cut(s) 282
BseYI CCCAGC 1 cut(s) 56
Bsh1236I CGCG 2 cut(s) 86, 107
BshFI GGCC 1 cut(s) 401
BshNI GGYRCC 1 cut(s) 138
BsiSI CCGG 3 cut(s) 232, 238, 485
BsiWI CGTACG 1 cut(s) 375
BslI CCNNNNNNNGG 1 cut(s) 231
BsmAI GTCTC 1 cut(s) 457
BsmBI CGTCTC 1 cut(s) 457
BsnI GGCC 1 cut(s) 401
Bsp119I TTCGAA 1 cut(s) 473
Bsp1286I GDGCHC 1 cut(s) 224
Bsp13I TCCGGA 2 cut(s) 231, 237
Bsp143I GATC 5 cut(s) 73, 234, 249, 431, 579
Bsp19I CCATGG 1 cut(s) 615
BspACI CCGC 6 cut(s) 51, 84, 86, 93, 98, 107
BspANI GGCC 1 cut(s) 401
BspCNI CTCAG 1 cut(s) 613
BspEI TCCGGA 2 cut(s) 231, 237
BspFNI CGCG 2 cut(s) 86, 107
BspLI GGNNCC 2 cut(s) 140, 236
BspPI GGATC 2 cut(s) 229, 242
BspT104I TTCGAA 1 cut(s) 473
BspT107I GGYRCC 1 cut(s) 138
BsrBI CCGCTC 1 cut(s) 95
BsrFI RCCGGY 1 cut(s) 484
BssAI RCCGGY 1 cut(s) 484
BssECI CCNNGG 2 cut(s) 84, 615
BssMI GATC 5 cut(s) 73, 234, 249, 431, 579
BssNI GRCGYC 4 cut(s) 139, 245, 450, 539
BssSI CACGAG 1 cut(s) 277
BssT1I CCWWGG 1 cut(s) 615
Bst2BI CACGAG 1 cut(s) 277
Bst2UI CCWGG 1 cut(s) 439
Bst4CI ACNGT 3 cut(s) 190, 205, 498
BstACI GRCGYC 4 cut(s) 139, 245, 450, 539
BstBAI YACGTR 2 cut(s) 151, 419
BstBI TTCGAA 1 cut(s) 473
BstC8I GCNNGC 1 cut(s) 486
BstDEI CTNAG 1 cut(s) 600
BstDSI CCRYGG 2 cut(s) 84, 615
BstFNI CGCG 2 cut(s) 86, 107
BstH2I RGCGCY 2 cut(s) 142, 276
BstHHI GCGC 4 cut(s) 107, 132, 141, 275
BstKTI GATC 5 cut(s) 76, 237, 252, 434, 582
BstMAI GTCTC 1 cut(s) 457
BstMBI GATC 5 cut(s) 73, 234, 249, 431, 579
BstMWI GCNNNNNNNGC 4 cut(s) 92, 136, 138, 161
BstNI CCWGG 1 cut(s) 439
BstSCI CCNGG 1 cut(s) 437
BstSNI TACGTA 1 cut(s) 151
BstUI CGCG 2 cut(s) 86, 107
BstV1I GCAGC 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 234
BstXI CCANNNNNNTGG 1 cut(s) 445
BstYI RGATCY 1 cut(s) 234
BsuRI GGCC 1 cut(s) 401
BtgI CCRYGG 2 cut(s) 84, 615
BtsIMutI CAGTG 2 cut(s) 195, 252
Cac8I GCNNGC 1 cut(s) 486
CfoI GCGC 4 cut(s) 107, 132, 141, 275
Cfr10I RCCGGY 1 cut(s) 484
Cfr42I CCGCGG 1 cut(s) 87
CseI GACGC 1 cut(s) 234
Csp6I GTAC 1 cut(s) 376
CviAII CATG 3 cut(s) 64, 133, 616
CviJI RGCY 6 cut(s) 60, 83, 115, 155, 222, 401
CviKI_1 RGCY 6 cut(s) 60, 83, 115, 155, 222, 401
CviQI GTAC 1 cut(s) 376
DdeI CTNAG 1 cut(s) 600
DinI GGCGCC 1 cut(s) 140
DpnI GATC 5 cut(s) 75, 236, 251, 433, 581
DpnII GATC 5 cut(s) 73, 234, 249, 431, 579
DrdI GACNNNNNNGTC 1 cut(s) 263
DseDI GACNNNNNNGTC 1 cut(s) 263
EciI GGCGGA 2 cut(s) 40, 87
Eco105I TACGTA 1 cut(s) 151
Eco130I CCWWGG 1 cut(s) 615
Eco24I GRGCYC 1 cut(s) 224
Eco72I CACGTG 1 cut(s) 419
EcoRII CCWGG 1 cut(s) 437
EcoT14I CCWWGG 1 cut(s) 615
EcoT38I GRGCYC 1 cut(s) 224
EgeI GGCGCC 1 cut(s) 140
EheI GGCGCC 1 cut(s) 140
ErhI CCWWGG 1 cut(s) 615
Esp3I CGTCTC 1 cut(s) 457
FaeI CATG 3 cut(s) 67, 136, 619
FaiI YATR 5 cut(s) 65, 134, 351, 617, 658
FalI AAGNNNNNCTT 2 cut(s) 612, 644
FatI CATG 3 cut(s) 63, 132, 615
FbaI TGATCA 1 cut(s) 579
Fnu4HI GCNGC 2 cut(s) 84, 271
FriOI GRGCYC 1 cut(s) 224
Fsp4HI GCNGC 2 cut(s) 84, 271
FspBI CTAG 1 cut(s) 102
GlaI GCGC 4 cut(s) 106, 131, 140, 274
GluI GCNGC 2 cut(s) 84, 271
GsaI CCCAGC 1 cut(s) 60
HaeII RGCGCY 2 cut(s) 142, 276
HaeIII GGCC 1 cut(s) 401
HapII CCGG 3 cut(s) 232, 238, 485
HgaI GACGC 1 cut(s) 234
HhaI GCGC 4 cut(s) 107, 132, 141, 275
Hin1I GRCGYC 4 cut(s) 139, 245, 450, 539
Hin1II CATG 3 cut(s) 67, 136, 619
Hin6I GCGC 4 cut(s) 105, 130, 139, 273
HinP1I GCGC 4 cut(s) 105, 130, 139, 273
HinfI GANTC 3 cut(s) 280, 360, 562
HpaII CCGG 3 cut(s) 232, 238, 485
HphI GGTGA 5 cut(s) 193, 331, 472, 486, 589
Hpy166II GTNNAC 2 cut(s) 448, 463
Hpy188I TCNGA 3 cut(s) 531, 570, 603
Hpy188III TCNNGA 5 cut(s) 77, 217, 232, 238, 583
Hpy8I GTNNAC 2 cut(s) 448, 463
Hpy99I CGWCG 3 cut(s) 250, 289, 541
HpyAV CCTTC 3 cut(s) 152, 436, 568
HpyCH4III ACNGT 3 cut(s) 190, 205, 498
HpyCH4IV ACGT 5 cut(s) 150, 306, 418, 450, 539
HpyCH4V TGCA 3 cut(s) 197, 612, 660
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 136, 138, 161
HpyF3I CTNAG 1 cut(s) 600
HpySE526I ACGT 5 cut(s) 150, 306, 418, 450, 539
Hsp92I GRCGYC 4 cut(s) 139, 245, 450, 539
Hsp92II CATG 3 cut(s) 67, 136, 619
HspAI GCGC 4 cut(s) 105, 130, 139, 273
KasI GGCGCC 1 cut(s) 138
Kpn2I TCCGGA 2 cut(s) 231, 237
KroI GCCGGC 1 cut(s) 484
KroNI GCCGGC 1 cut(s) 486
Ksp22I TGATCA 1 cut(s) 579
KspI CCGCGG 1 cut(s) 87
Kzo9I GATC 5 cut(s) 73, 234, 249, 431, 579
LmnI GCTCC 3 cut(s) 69, 100, 112
LpnPI CCDG 9 cut(s) 62, 70, 245, 251, 383, 409, 424, 451, 498
Lsp1109I GCAGC 1 cut(s) 282
LweI GCATC 1 cut(s) 33
MaeI CTAG 1 cut(s) 102
MaeII ACGT 5 cut(s) 150, 306, 418, 450, 539
MaeIII GTNAC 2 cut(s) 119, 338
MalI GATC 5 cut(s) 75, 236, 251, 433, 581
MbiI CCGCTC 1 cut(s) 95
MboI GATC 5 cut(s) 73, 234, 249, 431, 579
MboII GAAGA 6 cut(s) 151, 334, 365, 571, 598, 601
MflI RGATCY 1 cut(s) 234
MhlI GDGCHC 1 cut(s) 224
MluCI AATT 3 cut(s) 227, 390, 607
Mly113I GGCGCC 1 cut(s) 139
MlyI GAGTC 1 cut(s) 289
MnlI CCTC 8 cut(s) 58, 60, 103, 129, 374, 403, 406, 553
MroI TCCGGA 2 cut(s) 231, 237
MroNI GCCGGC 1 cut(s) 484
MroXI GAANNNNTTC 1 cut(s) 624
MslI CAYNNNNRTG 1 cut(s) 206
MspA1I CMGCKG 1 cut(s) 86
MspI CCGG 3 cut(s) 232, 238, 485
MspR9I CCNGG 1 cut(s) 439
MvaI CCWGG 1 cut(s) 439
MvnI CGCG 2 cut(s) 86, 107
MwoI GCNNNNNNNGC 4 cut(s) 92, 136, 138, 161
NaeI GCCGGC 1 cut(s) 486
NarI GGCGCC 1 cut(s) 139
NcoI CCATGG 1 cut(s) 615
NdeII GATC 5 cut(s) 73, 234, 249, 431, 579
NgoMIV GCCGGC 1 cut(s) 484
NlaIII CATG 3 cut(s) 67, 136, 619
NlaIV GGNNCC 2 cut(s) 140, 236
NmuCI GTSAC 2 cut(s) 119, 338
NspV TTCGAA 1 cut(s) 473
PcsI WCGNNNNNNNCGW 1 cut(s) 284
PdiI GCCGGC 1 cut(s) 486
PdmI GAANNNNTTC 1 cut(s) 624
PfeI GAWTC 2 cut(s) 360, 562
Pfl23II CGTACG 1 cut(s) 375
PflFI GACNNNGTC 1 cut(s) 244
PkrI GCNGC 2 cut(s) 85, 272
PleI GAGTC 1 cut(s) 288
PluTI GGCGCC 1 cut(s) 142
PmaCI CACGTG 1 cut(s) 419
PmlI CACGTG 1 cut(s) 419
PpsI GAGTC 1 cut(s) 288
Ppu21I YACGTR 2 cut(s) 151, 419
Psp6I CCWGG 1 cut(s) 437
PspCI CACGTG 1 cut(s) 419
PspFI CCCAGC 1 cut(s) 56
PspGI CCWGG 1 cut(s) 437
PspLI CGTACG 1 cut(s) 375
PspN4I GGNNCC 2 cut(s) 140, 236
PsuI RGATCY 1 cut(s) 234
PsyI GACNNNGTC 1 cut(s) 244
RsaI GTAC 1 cut(s) 377
RsaNI GTAC 1 cut(s) 376
RseI CAYNNNNRTG 1 cut(s) 206
SacII CCGCGG 1 cut(s) 87
SatI GCNGC 2 cut(s) 84, 271
Sau3AI GATC 5 cut(s) 73, 234, 249, 431, 579
SchI GAGTC 1 cut(s) 289
ScrFI CCNGG 1 cut(s) 439
SduI GDGCHC 1 cut(s) 224
SfaNI GCATC 1 cut(s) 33
SfoI GGCGCC 1 cut(s) 140
Sfr303I CCGCGG 1 cut(s) 87
SfuI TTCGAA 1 cut(s) 473
SgrBI CCGCGG 1 cut(s) 87
SmiMI CAYNNNNRTG 1 cut(s) 206
SnaBI TACGTA 1 cut(s) 151
Sse9I AATT 3 cut(s) 227, 390, 607
SsiI CCGC 6 cut(s) 51, 84, 86, 93, 98, 107
SspDI GGCGCC 1 cut(s) 138
SspMI CTAG 1 cut(s) 102
StyD4I CCNGG 1 cut(s) 437
StyI CCWWGG 1 cut(s) 615
TaaI ACNGT 3 cut(s) 190, 205, 498
TaiI ACGT 5 cut(s) 153, 309, 421, 453, 542
TaqI TCGA 4 cut(s) 248, 345, 434, 473
TasI AATT 3 cut(s) 227, 390, 607
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 2 cut(s) 360, 562
TscAI CASTG 2 cut(s) 195, 259
TseFI GTSAC 2 cut(s) 119, 338
TseI GCWGC 1 cut(s) 270
Tsp45I GTSAC 2 cut(s) 119, 338
TspDTI ATGAA 6 cut(s) 224, 299, 366, 554, 587, 620
TspGWI ACGGA 3 cut(s) 27, 273, 393
TspRI CASTG 2 cut(s) 195, 259
Tth111I GACNNNGTC 1 cut(s) 244
XapI RAATTY 1 cut(s) 227
XmnI GAANNNNTTC 1 cut(s) 624
XspI CTAG 1 cut(s) 102
ZraI GACGTC 2 cut(s) 451, 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.