Rorug07G0032100

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000065
Physical Location & Seq
Forward (+)
2235995 .. 2240397
4403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0032100.1

Sequence Viewer

Length: 1647 bp
ATGGGGAACTGCAACGTGTGCGTCAGAGCTGACGTCATCGAGAACCAGGGCACCTACCAGGCGAACAACAAGAAGAAGAAGGCCGGGGAGCGGCGGCCGAACCCGTTCTCCGAGGACGCGATCCGGTCGCCGGCGCCGATCCGAGTCCTCAAGGACGTGATTCCGCTCGGTCACCGGACTCGGATCGGCGACAAGTACATACTGGGCCGGGAGCTGGGCCGCGGCGAGTTCGGCATCACCTACCTCTGTACGGACCGCGAGACTAAAGAAGCTCTGGCCTGCAAGTCCATCTCCAAACGGAAGCTCCGGACTGCTGTGGATATAGAGGACGTGAGGCGCGAGGTTGCGATAATGTCCAATTTGCCGGAGCATCCGAACATAGTGAAGCTGAAGGCGACCTATGAGGACAACGAGAACGTTCACCTGGTGATGGAGCTCTGTGAAGGAGGCGAGCTTTTCGATAGGATTGTGGCGAGAGGGCACTACAGTGAACGGGCTGCGGCGAACGTAGCCAGGACTGTAGCTGAGGTGGTGAGGATGTGCCATGCGAATGGGGTTATGCACAGGGATTTGAAGCCGGAGAACTTTCTGTTTTCGAATAAGAAAGAGCACTCCCCGCTTAAGGCTATTGATTTTGGGCTCTCTGTGTTTTTTAAGCCTGGGGAGAAGTTTATGGAGATTGTGGGGAGTCCGTACTACATGGCGCCCGAGGTTTTGAAGAGGAATTATGGACCGGAGGTTGATATATGGAGCGCCGGAGTGATTCTTTACATTTTGTTATGTGGGGTTCCTCCATTTTGGGCGGAGAGTGAACAGGGTGTGGCTCTTGCAATCTTGAGGGGGGTGATTGATTTCAAGAGGGAACCCTGGCCTCAGATTTCAGAGAGTGCTAAAAGCCTCGTAAGGCAGATGCTCGACCCGGATCCTAAAAAACGCTTGACTGCTCAACAGGTGCTTGAACATCCATGGTTACAAAATGCAAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTGAGGCCAAGGCTCAAGCAGTTCTCAATAATGAATAGATTTAAAAAGAAGGCCTTACGGGTAATTGCGGAGCACTTATCTGTTAAAGAAGTAGAAGTAATCAGGGACATGTTCACATTGATGGACACTGATAAAGATGGCAGAGTAACTTATGAGGAATTGAAGACTGGTCTTCAAAAGGTTGGTTCGCAGTTGGCTGAACCAGAGGTTAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAATGGATTTCTGGATTATGGAGAGTTCGCAGCAGTTACAATTCACTTGCAAAAATTGGAGAATGATGAACATCTCCGGAGAGCATTTATATTCTTTGACAAGGATGGAAGTGGGTATATTGAATTAGTTGAGCTAAGGCAAGCATTGGCAGATGAAACAGGTGAAACGGATATGGATGTGCTGACTGACATCATGCGTGAGGTGGATACTGACAAGGATGGGCGTATCAGTTATGATGAGTTTGTTGCCATGATGAAAACTGGAACTGATTGGAGAAAGGCGTCTCGACAGTATTCTAGGGAAAGATTCAAGAGTTTAAGCCTCAATCTGATGAAAGATGGTTCATTACAGCTTCACGATGGGCTAACGGGTCAAGCCGTTGCCGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

548

Amino Acids

62.13

Weight (kDa)

6.67

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 67 - 324 1.4e-79 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 68 - 320 2.1e-27 Protein tyrosine and serine/threonine kinase
EF-hand_7 PF13499 370 - 431 4.6e-11 EF-hand domain pair
EF-hand_1 PF00036 372 - 398 5.7e-07 EF hand domain
EF-hand_7 PF13499 442 - 505 1.1e-16 EF-hand domain pair
EF-hand_6 PF13405 444 - 469 5.1e-06 EF-hand domain
EF-hand_1 PF00036 481 - 506 2.4e-08 EF hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 36
AccB1I GGYRCC 3 cut(s) 50, 133, 703
AccBSI CCGCTC 2 cut(s) 91, 166
AccII CGCG 4 cut(s) 119, 222, 258, 339
AccIII TCCGGA 2 cut(s) 306, 1332
AclI AACGTT 1 cut(s) 417
AclWI GGATC 5 cut(s) 115, 133, 191, 917, 930
AcoI YGGCCR 1 cut(s) 95
AcuI CTGAAG 1 cut(s) 410
AcyI GRCGYC 4 cut(s) 33, 134, 704, 1538
AdeI CACNNNGTG 1 cut(s) 427
AfaI GTAC 3 cut(s) 197, 250, 695
AfiI CCNNNNNNNGG 6 cut(s) 90, 130, 214, 250, 430, 622
AflII CTTAAG 1 cut(s) 620
AflIII ACRYGT 2 cut(s) 15, 1122
AgsI TTSAA 8 cut(s) 574, 718, 856, 959, 1177, 1190, 1379, 1567
AjiI CACGTC 2 cut(s) 157, 331
AjnI CCWGG 6 cut(s) 45, 57, 423, 512, 658, 866
AleI CACNNNNGTG 1 cut(s) 486
AloI GAACNNNNNNTCC 2 cut(s) 92, 124
Alw21I GWGCWC 3 cut(s) 438, 612, 1089
Alw26I GTCTC 2 cut(s) 254, 1545
AlwI GGATC 5 cut(s) 115, 133, 191, 917, 930
Ama87I CYCGRG 1 cut(s) 707
Aor13HI TCCGGA 2 cut(s) 306, 1332
AoxI GGCC 8 cut(s) 81, 95, 205, 217, 276, 869, 1019, 1065
ApeKI GCWGC 2 cut(s) 497, 1286
Asp700I GAANNNNTTC 1 cut(s) 104
AspLEI GCGC 4 cut(s) 136, 339, 706, 755
AspS9I GGNCC 4 cut(s) 205, 217, 253, 731
AsuC2I CCSGG 3 cut(s) 85, 209, 920
AsuHPI GGTGA 7 cut(s) 164, 229, 413, 439, 544, 856, 1430
AsuII TTCGAA 1 cut(s) 596
AvaI CYCGRG 1 cut(s) 707
AvaII GGWCC 2 cut(s) 253, 731
BaeGI GKGCMC 2 cut(s) 53, 483
BamHI GGATCC 1 cut(s) 922
BanI GGYRCC 3 cut(s) 50, 133, 703
BanII GRGCYC 2 cut(s) 438, 642
BbsI GAAGAC 2 cut(s) 1178, 1184
Bbv12I GWGCWC 3 cut(s) 438, 612, 1089
BbvCI CCTCAGC 1 cut(s) 525
BbvI GCAGC 2 cut(s) 484, 1298
BceAI ACGGC 2 cut(s) 1619, 1625
BciT130I CCWGG 6 cut(s) 47, 59, 425, 514, 660, 868
BciVI GTATCC 1 cut(s) 1456
BcnI CCSGG 3 cut(s) 85, 209, 920
BcoDI GTCTC 2 cut(s) 254, 1545
BfaI CTAG 1 cut(s) 1554
BfmI CTRYAG 2 cut(s) 484, 519
BfoI RGCGCY 3 cut(s) 137, 707, 756
BfrI CTTAAG 1 cut(s) 620
BfuI GTATCC 1 cut(s) 1456
BisI GCNGC 7 cut(s) 92, 95, 220, 223, 498, 501, 1287
BlsI GCNGC 7 cut(s) 93, 96, 221, 224, 499, 502, 1288
Bme1390I CCNGG 9 cut(s) 47, 59, 85, 209, 425, 514, 660, 868, 920
Bme18I GGWCC 2 cut(s) 253, 731
BmeT110I CYCGRG 1 cut(s) 707
BmgBI CACGTC 2 cut(s) 157, 331
BmgT120I GGNCC 4 cut(s) 205, 217, 253, 731
BmiI GGNNCC 6 cut(s) 52, 135, 705, 789, 864, 924
BmrFI CCNGG 9 cut(s) 47, 59, 85, 209, 425, 514, 660, 868, 920
BmrI ACTGGG 1 cut(s) 212
BmsI GCATC 4 cut(s) 243, 379, 900, 1218
BmuI ACTGGG 1 cut(s) 212
BpiI GAAGAC 2 cut(s) 1178, 1184
Bpu10I CCTNAGC 2 cut(s) 525, 1391
Bpu14I TTCGAA 1 cut(s) 596
BpuEI CTTGAG 3 cut(s) 134, 856, 1013
BpuMI CCSGG 3 cut(s) 85, 209, 920
BsaBI GATNNNNATC 1 cut(s) 1326
BsaHI GRCGYC 4 cut(s) 33, 134, 704, 1538
BsaJI CCNNGG 9 cut(s) 46, 84, 111, 220, 659, 708, 866, 965, 1022
BsaWI WCCGGW 5 cut(s) 123, 174, 306, 733, 1332
BsaXI ACNNNNNCTCC 6 cut(s) 92, 122, 288, 318, 999, 1029
Bsc4I CCNNNNNNNGG 6 cut(s) 90, 130, 214, 250, 430, 622
Bse118I RCCGGY 1 cut(s) 130
Bse1I ACTGG 3 cut(s) 207, 1186, 1522
Bse8I GATNNNNATC 1 cut(s) 1326
BseAI TCCGGA 2 cut(s) 306, 1332
BseBI CCWGG 6 cut(s) 47, 59, 425, 514, 660, 868
BseDI CCNNGG 9 cut(s) 46, 84, 111, 220, 659, 708, 866, 965, 1022
BseGI GGATG 6 cut(s) 370, 543, 961, 1366, 1438, 1480
BseJI GATNNNNATC 1 cut(s) 1326
BseLI CCNNNNNNNGG 6 cut(s) 90, 130, 214, 250, 430, 622
BseMII CTCAG 2 cut(s) 516, 887
BseNI ACTGG 3 cut(s) 207, 1186, 1522
BseSI GKGCMC 2 cut(s) 53, 483
BseX3I CGGCCG 1 cut(s) 95
BseXI GCAGC 2 cut(s) 484, 1298
BseYI CCCAGC 1 cut(s) 214
Bsh1236I CGCG 4 cut(s) 119, 222, 258, 339
Bsh1285I CGRYCG 2 cut(s) 98, 128
BshFI GGCC 8 cut(s) 83, 97, 207, 219, 278, 871, 1021, 1067
BshNI GGYRCC 3 cut(s) 50, 133, 703
BsiEI CGRYCG 2 cut(s) 98, 128
BsiHKAI GWGCWC 3 cut(s) 438, 612, 1089
BsiHKCI CYCGRG 1 cut(s) 707
BslFI GGGAC 1 cut(s) 1133
BslI CCNNNNNNNGG 6 cut(s) 90, 130, 214, 250, 430, 622
BsmAI GTCTC 2 cut(s) 254, 1545
BsmBI CGTCTC 1 cut(s) 1545
BsmFI GGGAC 1 cut(s) 1133
BsnI GGCC 8 cut(s) 83, 97, 207, 219, 278, 871, 1021, 1067
BsoBI CYCGRG 1 cut(s) 707
Bsp119I TTCGAA 1 cut(s) 596
Bsp1286I GDGCHC 6 cut(s) 53, 438, 483, 612, 642, 1089
Bsp13I TCCGGA 2 cut(s) 306, 1332
Bsp143I GATC 4 cut(s) 120, 138, 183, 922
Bsp19I CCATGG 1 cut(s) 965
BspANI GGCC 8 cut(s) 83, 97, 207, 219, 278, 871, 1021, 1067
BspCNI CTCAG 2 cut(s) 517, 886
BspEI TCCGGA 2 cut(s) 306, 1332
BspFNI CGCG 4 cut(s) 119, 222, 258, 339
BspLI GGNNCC 6 cut(s) 52, 135, 705, 789, 864, 924
BspPI GGATC 5 cut(s) 115, 133, 191, 917, 930
BspT104I TTCGAA 1 cut(s) 596
BspT107I GGYRCC 3 cut(s) 50, 133, 703
BspTI CTTAAG 1 cut(s) 620
BsrBI CCGCTC 2 cut(s) 91, 166
BsrFI RCCGGY 1 cut(s) 130
BsrI ACTGG 3 cut(s) 207, 1186, 1522
BssAI RCCGGY 1 cut(s) 130
BssECI CCNNGG 9 cut(s) 46, 84, 111, 220, 659, 708, 866, 965, 1022
BssMI GATC 4 cut(s) 120, 138, 183, 922
BssNI GRCGYC 4 cut(s) 33, 134, 704, 1538
BssT1I CCWWGG 2 cut(s) 965, 1022
Bst2UI CCWGG 6 cut(s) 47, 59, 425, 514, 660, 868
Bst4CI ACNGT 3 cut(s) 488, 520, 1548
Bst6I CTCTTC 1 cut(s) 713
BstACI GRCGYC 4 cut(s) 33, 134, 704, 1538
BstAFI CTTAAG 1 cut(s) 620
BstAPI GCANNNNNTGC 1 cut(s) 18
BstBI TTCGAA 1 cut(s) 596
BstC8I GCNNGC 4 cut(s) 132, 280, 452, 1398
BstDEI CTNAG 3 cut(s) 525, 873, 1391
BstDSI CCRYGG 2 cut(s) 220, 965
BstEII GGTNACC 1 cut(s) 170
BstF5I GGATG 6 cut(s) 370, 543, 961, 1366, 1438, 1480
BstFNI CGCG 4 cut(s) 119, 222, 258, 339
BstH2I RGCGCY 3 cut(s) 137, 707, 756
BstHHI GCGC 4 cut(s) 136, 339, 706, 755
BstKTI GATC 4 cut(s) 123, 141, 186, 925
BstMAI GTCTC 2 cut(s) 254, 1545
BstMBI GATC 4 cut(s) 120, 138, 183, 922
BstMCI CGRYCG 2 cut(s) 98, 128
BstMWI GCNNNNNNNGC 5 cut(s) 18, 231, 509, 616, 986
BstNI CCWGG 6 cut(s) 47, 59, 425, 514, 660, 868
BstNSI RCATGY 1 cut(s) 1126
BstPI GGTNACC 1 cut(s) 170
BstSCI CCNGG 9 cut(s) 45, 57, 83, 207, 423, 512, 658, 866, 918
BstSFI CTRYAG 2 cut(s) 484, 519
BstSLI GKGCMC 2 cut(s) 53, 483
BstUI CGCG 4 cut(s) 119, 222, 258, 339
BstV1I GCAGC 2 cut(s) 484, 1298
BstV2I GAAGAC 2 cut(s) 1178, 1184
BstX2I RGATCY 1 cut(s) 922
BstXI CCANNNNNNTGG 1 cut(s) 551
BstYI RGATCY 1 cut(s) 922
BstZI CGGCCG 1 cut(s) 95
BsuI GTATCC 1 cut(s) 1456
BsuRI GGCC 8 cut(s) 83, 97, 207, 219, 278, 871, 1021, 1067
BtgI CCRYGG 2 cut(s) 220, 965
BtrI CACGTC 2 cut(s) 157, 331
BtsCI GGATG 6 cut(s) 370, 543, 961, 1366, 1438, 1480
BtsIMutI CAGTG 2 cut(s) 493, 1140
Cac8I GCNNGC 4 cut(s) 132, 280, 452, 1398
CfoI GCGC 4 cut(s) 136, 339, 706, 755
Cfr10I RCCGGY 1 cut(s) 130
Cfr13I GGNCC 4 cut(s) 205, 217, 253, 731
Cfr42I CCGCGG 1 cut(s) 223
CpoI CGGWCCG 1 cut(s) 253
CseI GACGC 3 cut(s) 10, 125, 1527
CsiI ACCWGGT 1 cut(s) 423
Csp6I GTAC 3 cut(s) 196, 249, 694
CspI CGGWCCG 1 cut(s) 253
CviAII CATG 6 cut(s) 545, 700, 966, 1123, 1450, 1507
CviQI GTAC 3 cut(s) 196, 249, 694
DdeI CTNAG 3 cut(s) 525, 873, 1391
DinI GGCGCC 2 cut(s) 135, 705
DpnI GATC 4 cut(s) 122, 140, 185, 924
DpnII GATC 4 cut(s) 120, 138, 183, 922
DraI TTTAAA 1 cut(s) 1057
DraIII CACNNNGTG 1 cut(s) 427
EaeI YGGCCR 1 cut(s) 95
EagI CGGCCG 1 cut(s) 95
Eam1104I CTCTTC 1 cut(s) 713
EarI CTCTTC 1 cut(s) 713
EciI GGCGGA 1 cut(s) 818
Ecl136II GAGCTC 1 cut(s) 436
EclXI CGGCCG 1 cut(s) 95
Eco130I CCWWGG 2 cut(s) 965, 1022
Eco147I AGGCCT 1 cut(s) 1067
Eco24I GRGCYC 2 cut(s) 438, 642
Eco47I GGWCC 2 cut(s) 253, 731
Eco52I CGGCCG 1 cut(s) 95
Eco53kI GAGCTC 1 cut(s) 436
Eco57I CTGAAG 1 cut(s) 410
Eco88I CYCGRG 1 cut(s) 707
Eco91I GGTNACC 1 cut(s) 170
EcoICRI GAGCTC 1 cut(s) 436
EcoO65I GGTNACC 1 cut(s) 170
EcoRII CCWGG 6 cut(s) 45, 57, 423, 512, 658, 866
EcoT14I CCWWGG 2 cut(s) 965, 1022
EcoT38I GRGCYC 2 cut(s) 438, 642
EgeI GGCGCC 2 cut(s) 135, 705
EheI GGCGCC 2 cut(s) 135, 705
ErhI CCWWGG 2 cut(s) 965, 1022
Esp3I CGTCTC 1 cut(s) 1545
FaeI CATG 6 cut(s) 548, 703, 969, 1126, 1453, 1510
FalI AAGNNNNNCTT 2 cut(s) 1052, 1084
FaqI GGGAC 1 cut(s) 1133
FatI CATG 6 cut(s) 544, 699, 965, 1122, 1449, 1506
FauI CCCGC 1 cut(s) 624
Fnu4HI GCNGC 7 cut(s) 92, 95, 220, 223, 498, 501, 1287
FokI GGATG 6 cut(s) 357, 550, 948, 1373, 1445, 1487
FriOI GRGCYC 2 cut(s) 438, 642
Fsp4HI GCNGC 7 cut(s) 92, 95, 220, 223, 498, 501, 1287
FspBI CTAG 1 cut(s) 1554
GlaI GCGC 4 cut(s) 135, 338, 705, 754
GluI GCNGC 7 cut(s) 92, 95, 220, 223, 498, 501, 1287
GsaI CCCAGC 1 cut(s) 218
HaeII RGCGCY 3 cut(s) 137, 707, 756
HaeIII GGCC 8 cut(s) 83, 97, 207, 219, 278, 871, 1021, 1067
HgaI GACGC 3 cut(s) 10, 125, 1527
HhaI GCGC 4 cut(s) 136, 339, 706, 755
Hin1I GRCGYC 4 cut(s) 33, 134, 704, 1538
Hin1II CATG 6 cut(s) 548, 703, 969, 1126, 1453, 1510
Hin6I GCGC 4 cut(s) 134, 337, 704, 753
HinP1I GCGC 4 cut(s) 134, 337, 704, 753
HinfI GANTC 6 cut(s) 144, 160, 178, 688, 763, 1563
HphI GGTGA 7 cut(s) 164, 229, 413, 439, 544, 856, 1430
Hpy166II GTNNAC 4 cut(s) 421, 491, 812, 1128
Hpy188I TCNGA 8 cut(s) 26, 112, 143, 183, 375, 876, 883, 1587
Hpy188III TCNNGA 9 cut(s) 40, 307, 835, 856, 1268, 1333, 1542, 1567, 1613
Hpy8I GTNNAC 4 cut(s) 421, 491, 812, 1128
HpyAV CCTTC 4 cut(s) 73, 385, 437, 1057
HpyCH4III ACNGT 3 cut(s) 488, 520, 1548
HpyCH4IV ACGT 6 cut(s) 15, 33, 156, 330, 417, 507
HpyCH4V TGCA 6 cut(s) 12, 282, 562, 830, 980, 1306
HpyF10VI GCNNNNNNNGC 5 cut(s) 18, 231, 509, 616, 986
HpyF3I CTNAG 3 cut(s) 525, 873, 1391
HpySE526I ACGT 6 cut(s) 15, 33, 156, 330, 417, 507
Hsp92I GRCGYC 4 cut(s) 33, 134, 704, 1538
Hsp92II CATG 6 cut(s) 548, 703, 969, 1126, 1453, 1510
HspAI GCGC 4 cut(s) 134, 337, 704, 753
KasI GGCGCC 2 cut(s) 133, 703
Kpn2I TCCGGA 2 cut(s) 306, 1332
KroI GCCGGC 1 cut(s) 130
KroNI GCCGGC 1 cut(s) 132
KspI CCGCGG 1 cut(s) 223
Kzo9I GATC 4 cut(s) 120, 138, 183, 922
LmnI GCTCC 8 cut(s) 88, 211, 309, 367, 433, 750, 994, 1084
Lsp1109I GCAGC 2 cut(s) 484, 1298
LweI GCATC 4 cut(s) 243, 379, 900, 1218
MabI ACCWGGT 1 cut(s) 423
MaeI CTAG 1 cut(s) 1554
MaeII ACGT 6 cut(s) 15, 33, 156, 330, 417, 507
MaeIII GTNAC 4 cut(s) 170, 969, 1159, 1291
MalI GATC 4 cut(s) 122, 140, 185, 924
MbiI CCGCTC 2 cut(s) 91, 166
MboI GATC 4 cut(s) 120, 138, 183, 922
MboII GAAGA 5 cut(s) 85, 88, 730, 1178, 1189
MflI RGATCY 1 cut(s) 922
MhlI GDGCHC 6 cut(s) 53, 438, 483, 612, 642, 1089
MluCI AATT 7 cut(s) 358, 724, 1077, 1172, 1296, 1310, 1379
Mly113I GGCGCC 2 cut(s) 134, 704
MlyI GAGTC 3 cut(s) 153, 172, 697
MreI CGCCGGCG 1 cut(s) 130
MroI TCCGGA 2 cut(s) 306, 1332
MroNI GCCGGC 1 cut(s) 130
MroXI GAANNNNTTC 1 cut(s) 104
MseI TTAA 6 cut(s) 621, 654, 1056, 1098, 1224, 1574
MslI CAYNNNNRTG 3 cut(s) 486, 549, 1133
MspA1I CMGCKG 1 cut(s) 222
MspCI CTTAAG 1 cut(s) 620
MspR9I CCNGG 9 cut(s) 47, 59, 85, 209, 425, 514, 660, 868, 920
MvaI CCWGG 6 cut(s) 47, 59, 425, 514, 660, 868
MvnI CGCG 4 cut(s) 119, 222, 258, 339
MwoI GCNNNNNNNGC 5 cut(s) 18, 231, 509, 616, 986
NaeI GCCGGC 1 cut(s) 132
NarI GGCGCC 2 cut(s) 134, 704
NciI CCSGG 3 cut(s) 85, 209, 920
NcoI CCATGG 1 cut(s) 965
NdeII GATC 4 cut(s) 120, 138, 183, 922
NgoMIV GCCGGC 1 cut(s) 130
NlaIII CATG 6 cut(s) 548, 703, 969, 1126, 1453, 1510
NlaIV GGNNCC 6 cut(s) 52, 135, 705, 789, 864, 924
NmuCI GTSAC 1 cut(s) 170
NspI RCATGY 1 cut(s) 1126
NspV TTCGAA 1 cut(s) 596
OliI CACNNNNGTG 1 cut(s) 486
PceI AGGCCT 1 cut(s) 1067
PciI ACATGT 1 cut(s) 1122
PcsI WCGNNNNNNNCGW 2 cut(s) 134, 336
PdiI GCCGGC 1 cut(s) 132
PdmI GAANNNNTTC 1 cut(s) 104
PfeI GAWTC 3 cut(s) 160, 763, 1563
PkrI GCNGC 7 cut(s) 93, 96, 221, 224, 499, 502, 1288
PleI GAGTC 3 cut(s) 152, 172, 696
PluTI GGCGCC 2 cut(s) 137, 707
PpsI GAGTC 3 cut(s) 152, 172, 696
PscI ACATGT 1 cut(s) 1122
Psp124BI GAGCTC 1 cut(s) 438
Psp1406I AACGTT 1 cut(s) 417
Psp6I CCWGG 6 cut(s) 45, 57, 423, 512, 658, 866
PspEI GGTNACC 1 cut(s) 170
PspFI CCCAGC 1 cut(s) 214
PspGI CCWGG 6 cut(s) 45, 57, 423, 512, 658, 866
PspN4I GGNNCC 6 cut(s) 52, 135, 705, 789, 864, 924
PspPI GGNCC 4 cut(s) 205, 217, 253, 731
PsuI RGATCY 1 cut(s) 922
RsaI GTAC 3 cut(s) 197, 250, 695
RsaNI GTAC 3 cut(s) 196, 249, 694
RseI CAYNNNNRTG 3 cut(s) 486, 549, 1133
Rsr2I CGGWCCG 1 cut(s) 253
RsrII CGGWCCG 1 cut(s) 253
SacI GAGCTC 1 cut(s) 438
SacII CCGCGG 1 cut(s) 223
SaqAI TTAA 6 cut(s) 621, 654, 1056, 1098, 1224, 1574
SatI GCNGC 7 cut(s) 92, 95, 220, 223, 498, 501, 1287
Sau3AI GATC 4 cut(s) 120, 138, 183, 922
Sau96I GGNCC 4 cut(s) 205, 217, 253, 731
SchI GAGTC 3 cut(s) 153, 172, 697
ScrFI CCNGG 9 cut(s) 47, 59, 85, 209, 425, 514, 660, 868, 920
SduI GDGCHC 6 cut(s) 53, 438, 483, 612, 642, 1089
SexAI ACCWGGT 1 cut(s) 423
SfaNI GCATC 4 cut(s) 243, 379, 900, 1218
SfcI CTRYAG 2 cut(s) 484, 519
SfoI GGCGCC 2 cut(s) 135, 705
Sfr303I CCGCGG 1 cut(s) 223
SfuI TTCGAA 1 cut(s) 596
SgrAI CRCCGGYG 1 cut(s) 130
SgrBI CCGCGG 1 cut(s) 223
SinI GGWCC 2 cut(s) 253, 731
SmiMI CAYNNNNRTG 3 cut(s) 486, 549, 1133
SmlI CTYRAG 4 cut(s) 149, 620, 835, 1028
SmoI CTYRAG 4 cut(s) 149, 620, 835, 1028
Sse9I AATT 7 cut(s) 358, 724, 1077, 1172, 1296, 1310, 1379
SseBI AGGCCT 1 cut(s) 1067
SspDI GGCGCC 2 cut(s) 133, 703
SspMI CTAG 1 cut(s) 1554
SstI GAGCTC 1 cut(s) 438
StuI AGGCCT 1 cut(s) 1067
StyD4I CCNGG 9 cut(s) 45, 57, 83, 207, 423, 512, 658, 866, 918
StyI CCWWGG 2 cut(s) 965, 1022
TaaI ACNGT 3 cut(s) 488, 520, 1548
TaiI ACGT 6 cut(s) 18, 36, 159, 333, 420, 510
TaqI TCGA 5 cut(s) 39, 459, 596, 915, 1543
TaqII GACCGA 1 cut(s) 158
TasI AATT 7 cut(s) 358, 724, 1077, 1172, 1296, 1310, 1379
TatI WGTACW 1 cut(s) 195
TauI GCSGC 5 cut(s) 94, 97, 222, 225, 503
TfiI GAWTC 3 cut(s) 160, 763, 1563
Tru1I TTAA 6 cut(s) 621, 654, 1056, 1098, 1224, 1574
Tru9I TTAA 6 cut(s) 621, 654, 1056, 1098, 1224, 1574
TscAI CASTG 2 cut(s) 493, 1147
TseFI GTSAC 1 cut(s) 170
TseI GCWGC 2 cut(s) 497, 1286
Tsp45I GTSAC 1 cut(s) 170
TspDTI ATGAA 6 cut(s) 1061, 1338, 1425, 1526, 1590, 1604
TspGWI ACGGA 4 cut(s) 266, 313, 681, 1439
TspRI CASTG 2 cut(s) 493, 1147
Vha464I CTTAAG 1 cut(s) 620
VpaK11BI GGWCC 2 cut(s) 253, 731
XceI RCATGY 1 cut(s) 1126
XmnI GAANNNNTTC 1 cut(s) 104
XspI CTAG 1 cut(s) 1554
ZraI GACGTC 1 cut(s) 34
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.