Rroxscaffold_3G00259580

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000065
Physical Location & Seq
Forward (+)
54011240 .. 54011827
588 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00259580.1

Sequence Viewer

Length: 588 bp
ATGAAGAAACCCTTTCCACACCCTTTCCACGCCGATGAAGAGCGCAAGCGCCAGAAGAGGATCAAGATGTACAAATACATCGGTATTTTCATAGTGTTTCAAATCGTAGTGGTGACCGTTTTCGCACTCACGGTCATGAAAGTCAAGACCCCGAAAATCCGACTAGGCAACATCTACGTCCAGTCACTCACAGCCAACGCCGCAACCCCCTCATTCGACATGAACTTCGCAACCCAAATCCGGGTCAGGAACACCAACTGGGGACCTTACAAGTTCGAGGCCGGCGTAGTCACGTTCATGTACCAAGGTGTCCCCGTTGGACAAGTTTACATCCCCGAGGGCAAAGCTGGGATGAGGTCAACCAAGAAAATTGATGTGATGGTGAGTGTGAGCTCGGCCTCGTTGCCCGGGAACACAATGCTCGGGACTGAGCTGAACAATGGGCTATTGATGCTGACCAGCACGGCCACGGTGACCGGGAAAGTGGAGTTGATGTTGATCATGAAGAAGAGGAAGTCTGCGGACATGTTGTGCTCTATGGTGTTTAGTGTGGCCACAAACACTGTCCAGAATTTGGAGTGCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

195

Amino Acids

21.79

Weight (kDa)

9.9

Isoelectric Point (pI)

25.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 80 - 171 1.6e-06 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 574
AciI CCGC 2 cut(s) 201, 521
AclWI GGATC 1 cut(s) 68
AcoI YGGCCR 2 cut(s) 465, 552
AcsI RAATTY 1 cut(s) 571
AfaI GTAC 2 cut(s) 71, 302
AfiI CCNNNNNNNGG 3 cut(s) 240, 241, 574
AflIII ACRYGT 1 cut(s) 525
AgsI TTSAA 1 cut(s) 101
AluBI AGCT 3 cut(s) 347, 393, 433
AluI AGCT 3 cut(s) 347, 393, 433
Alw21I GWGCWC 2 cut(s) 395, 536
AlwI GGATC 1 cut(s) 68
Ama87I CYCGRG 3 cut(s) 335, 407, 422
AoxI GGCC 4 cut(s) 279, 396, 465, 552
ApoI RAATTY 1 cut(s) 571
ArsI GACNNNNNNTTYG 2 cut(s) 209, 241
AspLEI GCGC 2 cut(s) 45, 51
AspS9I GGNCC 1 cut(s) 263
AsuC2I CCSGG 4 cut(s) 242, 408, 409, 478
AsuHPI GGTGA 3 cut(s) 124, 394, 484
AvaI CYCGRG 3 cut(s) 335, 407, 422
AvaII GGWCC 1 cut(s) 263
BalI TGGCCA 1 cut(s) 554
BanII GRGCYC 1 cut(s) 395
Bbv12I GWGCWC 2 cut(s) 395, 536
BccI CCATC 1 cut(s) 373
BceAI ACGGC 1 cut(s) 480
BclI TGATCA 1 cut(s) 498
BcnI CCSGG 4 cut(s) 242, 408, 409, 478
BfaI CTAG 1 cut(s) 164
BfoI RGCGCY 1 cut(s) 52
BisI GCNGC 1 cut(s) 201
BlsI GCNGC 1 cut(s) 202
Bme1390I CCNGG 4 cut(s) 242, 408, 409, 478
Bme18I GGWCC 1 cut(s) 263
BmeT110I CYCGRG 3 cut(s) 335, 407, 422
BmgT120I GGNCC 1 cut(s) 263
BmiI GGNNCC 1 cut(s) 264
BmrFI CCNGG 4 cut(s) 242, 408, 409, 478
BmrI ACTGGG 1 cut(s) 268
BmsI GCATC 1 cut(s) 441
BmuI ACTGGG 1 cut(s) 268
BpuMI CCSGG 4 cut(s) 242, 408, 409, 478
BsaBI GATNNNNATC 1 cut(s) 497
BsaJI CCNNGG 4 cut(s) 304, 336, 407, 468
BsaXI ACNNNNNCTCC 3 cut(s) 479, 509, 569
Bsc4I CCNNNNNNNGG 3 cut(s) 240, 241, 574
Bse118I RCCGGY 1 cut(s) 281
Bse1I ACTGG 2 cut(s) 181, 263
Bse8I GATNNNNATC 1 cut(s) 497
BseDI CCNNGG 4 cut(s) 304, 336, 407, 468
BseGI GGATG 2 cut(s) 330, 357
BseJI GATNNNNATC 1 cut(s) 497
BseLI CCNNNNNNNGG 3 cut(s) 240, 241, 574
BseMII CTCAG 1 cut(s) 420
BseNI ACTGG 2 cut(s) 181, 263
BseYI CCCAGC 1 cut(s) 347
BshFI GGCC 4 cut(s) 281, 398, 467, 554
BsiHKAI GWGCWC 2 cut(s) 395, 536
BsiHKCI CYCGRG 3 cut(s) 335, 407, 422
BsiSI CCGG 4 cut(s) 241, 282, 408, 477
BslFI GGGAC 3 cut(s) 276, 296, 439
BslI CCNNNNNNNGG 3 cut(s) 240, 241, 574
BsmFI GGGAC 3 cut(s) 276, 296, 439
BsnI GGCC 4 cut(s) 281, 398, 467, 554
BsoBI CYCGRG 3 cut(s) 335, 407, 422
Bsp1286I GDGCHC 2 cut(s) 395, 536
Bsp1407I TGTACA 1 cut(s) 69
Bsp143I GATC 2 cut(s) 60, 498
BspACI CCGC 2 cut(s) 201, 521
BspANI GGCC 4 cut(s) 281, 398, 467, 554
BspCNI CTCAG 1 cut(s) 421
BspHI TCATGA 2 cut(s) 135, 501
BspLI GGNNCC 1 cut(s) 264
BspPI GGATC 1 cut(s) 68
BspQI GCTCTTC 1 cut(s) 33
BsrFI RCCGGY 1 cut(s) 281
BsrGI TGTACA 1 cut(s) 69
BsrI ACTGG 2 cut(s) 181, 263
BssAI RCCGGY 1 cut(s) 281
BssECI CCNNGG 4 cut(s) 304, 336, 407, 468
BssMI GATC 2 cut(s) 60, 498
BssT1I CCWWGG 1 cut(s) 304
Bst4CI ACNGT 4 cut(s) 118, 133, 472, 565
Bst6I CTCTTC 3 cut(s) 33, 50, 503
BstAUI TGTACA 1 cut(s) 69
BstC8I GCNNGC 2 cut(s) 47, 283
BstDEI CTNAG 1 cut(s) 429
BstDSI CCRYGG 1 cut(s) 468
BstEII GGTNACC 2 cut(s) 112, 472
BstF5I GGATG 2 cut(s) 330, 357
BstH2I RGCGCY 1 cut(s) 52
BstHHI GCGC 2 cut(s) 45, 51
BstKTI GATC 2 cut(s) 63, 501
BstMBI GATC 2 cut(s) 60, 498
BstMWI GCNNNNNNNGC 2 cut(s) 200, 451
BstNSI RCATGY 1 cut(s) 529
BstPI GGTNACC 2 cut(s) 112, 472
BstSCI CCNGG 4 cut(s) 240, 406, 407, 476
BsuRI GGCC 4 cut(s) 281, 398, 467, 554
BtgI CCRYGG 1 cut(s) 468
BtsCI GGATG 2 cut(s) 330, 357
BtsIMutI CAGTG 1 cut(s) 561
Cac8I GCNNGC 2 cut(s) 47, 283
CciI TCATGA 2 cut(s) 135, 501
CfoI GCGC 2 cut(s) 45, 51
Cfr10I RCCGGY 1 cut(s) 281
Cfr13I GGNCC 1 cut(s) 263
Cfr9I CCCGGG 1 cut(s) 407
Csp6I GTAC 2 cut(s) 70, 301
CviAII CATG 5 cut(s) 136, 220, 298, 502, 526
CviJI RGCY 9 cut(s) 194, 281, 347, 393, 398, 433, 445, 467, 554
CviKI_1 RGCY 9 cut(s) 194, 281, 347, 393, 398, 433, 445, 467, 554
CviQI GTAC 2 cut(s) 70, 301
DdeI CTNAG 1 cut(s) 429
DpnI GATC 2 cut(s) 62, 500
DpnII GATC 2 cut(s) 60, 498
EaeI YGGCCR 2 cut(s) 465, 552
Eam1104I CTCTTC 3 cut(s) 33, 50, 503
EarI CTCTTC 3 cut(s) 33, 50, 503
Ecl136II GAGCTC 1 cut(s) 393
Eco130I CCWWGG 1 cut(s) 304
Eco24I GRGCYC 1 cut(s) 395
Eco47I GGWCC 1 cut(s) 263
Eco53kI GAGCTC 1 cut(s) 393
Eco88I CYCGRG 3 cut(s) 335, 407, 422
Eco91I GGTNACC 2 cut(s) 112, 472
EcoICRI GAGCTC 1 cut(s) 393
EcoO109I RGGNCCY 1 cut(s) 263
EcoO65I GGTNACC 2 cut(s) 112, 472
EcoT14I CCWWGG 1 cut(s) 304
EcoT38I GRGCYC 1 cut(s) 395
ErhI CCWWGG 1 cut(s) 304
FaeI CATG 5 cut(s) 139, 223, 301, 505, 529
FaiI YATR 7 cut(s) 92, 137, 221, 299, 503, 527, 539
FalI AAGNNNNNCTT 1 cut(s) 28
FaqI GGGAC 3 cut(s) 276, 296, 439
FatI CATG 5 cut(s) 135, 219, 297, 501, 525
FbaI TGATCA 1 cut(s) 498
Fnu4HI GCNGC 1 cut(s) 201
FokI GGATG 2 cut(s) 317, 364
FriOI GRGCYC 1 cut(s) 395
Fsp4HI GCNGC 1 cut(s) 201
FspBI CTAG 1 cut(s) 164
GlaI GCGC 2 cut(s) 44, 50
GluI GCNGC 1 cut(s) 201
GsaI CCCAGC 1 cut(s) 351
HaeII RGCGCY 1 cut(s) 52
HaeIII GGCC 4 cut(s) 281, 398, 467, 554
HapII CCGG 4 cut(s) 241, 282, 408, 477
HhaI GCGC 2 cut(s) 45, 51
Hin1II CATG 5 cut(s) 139, 223, 301, 505, 529
Hin6I GCGC 2 cut(s) 43, 49
HinP1I GCGC 2 cut(s) 43, 49
HincII GTYRAC 1 cut(s) 360
HindII GTYRAC 1 cut(s) 360
HpaII CCGG 4 cut(s) 241, 282, 408, 477
HphI GGTGA 3 cut(s) 124, 394, 484
Hpy166II GTNNAC 2 cut(s) 328, 360
Hpy188I TCNGA 1 cut(s) 161
Hpy188III TCNNGA 7 cut(s) 64, 136, 145, 247, 424, 502, 568
Hpy8I GTNNAC 2 cut(s) 328, 360
HpyCH4III ACNGT 4 cut(s) 118, 133, 472, 565
HpyCH4IV ACGT 2 cut(s) 177, 293
HpyF10VI GCNNNNNNNGC 2 cut(s) 200, 451
HpyF3I CTNAG 1 cut(s) 429
HpySE526I ACGT 2 cut(s) 177, 293
Hsp92II CATG 5 cut(s) 139, 223, 301, 505, 529
HspAI GCGC 2 cut(s) 43, 49
KroI GCCGGC 1 cut(s) 281
KroNI GCCGGC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 498
Kzo9I GATC 2 cut(s) 60, 498
LguI GCTCTTC 1 cut(s) 33
LweI GCATC 1 cut(s) 441
MaeI CTAG 1 cut(s) 164
MaeII ACGT 2 cut(s) 177, 293
MaeIII GTNAC 4 cut(s) 112, 183, 289, 472
MalI GATC 2 cut(s) 62, 500
MboI GATC 2 cut(s) 60, 498
MboII GAAGA 5 cut(s) 16, 50, 67, 517, 520
MhlI GDGCHC 2 cut(s) 395, 536
MlsI TGGCCA 1 cut(s) 554
MluCI AATT 2 cut(s) 369, 571
MluNI TGGCCA 1 cut(s) 554
MmeI TCCRAC 2 cut(s) 184, 298
MnlI CCTC 7 cut(s) 51, 220, 271, 331, 348, 409, 504
Mox20I TGGCCA 1 cut(s) 554
MroNI GCCGGC 1 cut(s) 281
MscI TGGCCA 1 cut(s) 554
MslI CAYNNNNRTG 3 cut(s) 33, 134, 296
Msp20I TGGCCA 1 cut(s) 554
MspI CCGG 4 cut(s) 241, 282, 408, 477
MspR9I CCNGG 4 cut(s) 242, 408, 409, 478
MwoI GCNNNNNNNGC 2 cut(s) 200, 451
NaeI GCCGGC 1 cut(s) 283
NciI CCSGG 4 cut(s) 242, 408, 409, 478
NdeII GATC 2 cut(s) 60, 498
NgoMIV GCCGGC 1 cut(s) 281
NlaIII CATG 5 cut(s) 139, 223, 301, 505, 529
NlaIV GGNNCC 1 cut(s) 264
NmeAIII GCCGAG 1 cut(s) 374
NmuCI GTSAC 4 cut(s) 112, 183, 289, 472
NspI RCATGY 1 cut(s) 529
PagI TCATGA 2 cut(s) 135, 501
PciI ACATGT 1 cut(s) 525
PciSI GCTCTTC 1 cut(s) 33
PcsI WCGNNNNNNNCGW 1 cut(s) 282
PdiI GCCGGC 1 cut(s) 283
PflMI CCANNNNNTGG 1 cut(s) 574
PkrI GCNGC 1 cut(s) 202
PpuMI RGGWCCY 1 cut(s) 263
PscI ACATGT 1 cut(s) 525
Psp124BI GAGCTC 1 cut(s) 395
Psp5II RGGWCCY 1 cut(s) 263
PspEI GGTNACC 2 cut(s) 112, 472
PspFI CCCAGC 1 cut(s) 347
PspN4I GGNNCC 1 cut(s) 264
PspPI GGNCC 1 cut(s) 263
PspPPI RGGWCCY 1 cut(s) 263
RsaI GTAC 2 cut(s) 71, 302
RsaNI GTAC 2 cut(s) 70, 301
RseI CAYNNNNRTG 3 cut(s) 33, 134, 296
SacI GAGCTC 1 cut(s) 395
SapI GCTCTTC 1 cut(s) 33
SatI GCNGC 1 cut(s) 201
Sau3AI GATC 2 cut(s) 60, 498
Sau96I GGNCC 1 cut(s) 263
ScrFI CCNGG 4 cut(s) 242, 408, 409, 478
SduI GDGCHC 2 cut(s) 395, 536
SetI ASST 8 cut(s) 180, 268, 296, 310, 349, 359, 395, 435
SfaNI GCATC 1 cut(s) 441
SinI GGWCC 1 cut(s) 263
SmaI CCCGGG 1 cut(s) 409
SmiMI CAYNNNNRTG 3 cut(s) 33, 134, 296
Sse9I AATT 2 cut(s) 369, 571
SsiI CCGC 2 cut(s) 201, 521
SspMI CTAG 1 cut(s) 164
SstI GAGCTC 1 cut(s) 395
StyD4I CCNGG 4 cut(s) 240, 406, 407, 476
StyI CCWWGG 1 cut(s) 304
TaaI ACNGT 4 cut(s) 118, 133, 472, 565
TaiI ACGT 2 cut(s) 180, 296
TaqI TCGA 2 cut(s) 216, 276
TasI AATT 2 cut(s) 369, 571
TatI WGTACW 1 cut(s) 69
TauI GCSGC 1 cut(s) 203
TscAI CASTG 1 cut(s) 568
TseFI GTSAC 4 cut(s) 112, 183, 289, 472
Tsp45I GTSAC 4 cut(s) 112, 183, 289, 472
TspDTI ATGAA 7 cut(s) 17, 51, 79, 152, 236, 286, 518
TspMI CCCGGG 1 cut(s) 407
TspRI CASTG 1 cut(s) 568
Van91I CCANNNNNTGG 1 cut(s) 574
VpaK11BI GGWCC 1 cut(s) 263
XapI RAATTY 1 cut(s) 571
XceI RCATGY 1 cut(s) 529
XmaI CCCGGG 1 cut(s) 407
XspI CTAG 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.