Rorug07G0033300

Late embryogenesis abundant protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
2402433 .. 2405518
3086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0033300.1

Sequence Viewer

Length: 1776 bp
ATGGATGAAGCAAACCATTTGAATACATGGGAAGGTTATGTAGATTGGAGGAACAGACCTGCCATAAGAGGCCGTCATGGTGGAATGCTTGCTGTTTCATTTGTCTTAGTGGTGGAGATATTGGAGAACCTGGCTTACCTGGCCAATGCAAGCAACCTTGTGCTATACTTGTCGAAATTCATGCATTTCTCTCCATCCACTTCTGCCAACATTGTCACCAATTTCATGGGCACAGCCTTCCTACTTGCTCTCCTTGGTGGCTTTTTAGCAGATGCTTTCTTCACCACTTACTGCATCTATTTGATAAGTTCTGCAATAGAATTCACAGGTTTACTGGTACTCACAATCCAAGCTCATTTACCATCACTGAAGCTACCAACCTGCGCTTCAATGAGCACCGACAATCCATGCAAGGAAGTTAATGGTGGCAAAACAGTGATGTTATTCACAGGCCTCTATCTGGTGGCACTTGGAGTTGGAGGAATAAAAGGCTCTCTTCCGCCACACGGAGCGGAACAGTTTGATGAGACCACCCCACAAGGAAGGAAGCAGAGATCTTCATTCTTCAACTACTATGTGTTCTGTCTCTCTTGCGGGGCACTTGTTGCAGTAACTTTCGTGGTGTGGATCGAAGACAACAAAGGCTGGCAATGGGGTTTTGGGATTGCGACTGCAACAATTCTGCTCTCCATCCCGCTCTTCCTCCTTGGCTCTCCTACATATCGGACCAAAGTTCCTGCAGGAAGTCCGATCACGTCCATGTTTAAGGTTTTGGCTGCAGCAATGTGCAATAACTTCAAAGCTAGAAGTCCTAGCACTGCAGTCACCACAGTCCCATCTCATACACATGAATCCAGTGAGGGAGAAACTAATAGAGCTAAAGAAAAAGGGTCAAATCAAGCTCTAACAGAAAGCCTCAAATTCCTTAACAAAGCAGTGACTATGAAACCTGTCCACCCAATGTTACAATGCACTGCAAAACAACTAGAGGACGTCAAAATAGTCCTAAGAATCCTCCCTATCCTTATGTCCACCATAATGCTAAACTGCTGCCTTGCTCAGCTCTCCACATTCTCAGTGCAACAAGCAGCCACTATGAACACCAGCCTCGGATCCCTCAAAGTCCCACCGGCCTCTCTCCCTGTCTTCCCCGTCCTCTTCATCATGATCCTCGCACCGCTCTACAACCAAGTCATTGTCCCCTTTGCAAGAAAAGTAACCAAAACCGAAATGGGAATCACTCACCTACAGAGAATTGGAATAGGACTAATGTTCTCCATTGTAGCCATGGCAGTAGCTGCCTTGGTCGAAATCAAGAGAAAAAACGTCGCAGCCAAACATGGCTTGCTCAACTCTACCGGGCCATTACCCATCACGTTTCTTTGGGTGGCAATGCAGTACTTGTTTCTCGGCTCGGCTGATCTCTTCACATTGGCCGGAATGATGGAGTTTTTCTTCACTGAAGCTCCACTAAGCATGCGGTCTCTGGCCACAGCTCTGTCTTGGGCTTCATTGGCCATGGGATACTACCTCAGCTCAGTGCTTGTGAACATTGTCAATAGTATCACTGGGGCATATAGACGTAGACCTTGGCTGGTTGGTACCAACTTGAACATGTATCACCTTGAGAGGTTTTACTGGTTGATGTGTGTTTTGAGTGGGGTCAATTTCTTGTACTATCTCTTATGGGCCAGCCGCTACAAATACAGATCAACAGGGCTTGATGATGATGATTTTGATTTGGCGGAACATGAAAATCCAACTCCGAAGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

591

Amino Acids

65.12

Weight (kDa)

8.92

Isoelectric Point (pI)

36.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTR2 PF00854 101 - 528 3.1e-106 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 996
Acc36I ACCTGC 2 cut(s) 67, 389
Acc65I GGTACC 1 cut(s) 1601
AccB1I GGYRCC 1 cut(s) 1601
AccBSI CCGCTC 3 cut(s) 512, 697, 1180
AccI GTMKAC 1 cut(s) 1585
AciI CCGC 8 cut(s) 500, 512, 594, 695, 1178, 1480, 1696, 1745
AclWI GGATC 4 cut(s) 635, 1107, 1120, 1162
AcoI YGGCCR 4 cut(s) 141, 1434, 1488, 1515
AcsI RAATTY 3 cut(s) 176, 320, 920
AcuI CTGAAG 2 cut(s) 389, 1482
AcyI GRCGYC 1 cut(s) 993
AfaI GTAC 4 cut(s) 339, 1400, 1603, 1676
AfiI CCNNNNNNNGG 2 cut(s) 460, 506
AflIII ACRYGT 1 cut(s) 1614
AgsI TTSAA 5 cut(s) 22, 390, 568, 799, 1612
AjiI CACGTC 1 cut(s) 756
AjnI CCWGG 2 cut(s) 129, 138
AjuI GAANNNNNNNTTGG 2 cut(s) 370, 402
Alw21I GWGCWC 1 cut(s) 398
Alw26I GTCTC 3 cut(s) 521, 590, 1488
AlwI GGATC 4 cut(s) 635, 1107, 1120, 1162
AlwNI CAGNNNCTG 1 cut(s) 1298
AoxI GGCC 9 cut(s) 70, 141, 451, 1131, 1361, 1434, 1488, 1515, 1689
ApeKI GCWGC 6 cut(s) 776, 779, 1050, 1088, 1298, 1331
ApoI RAATTY 3 cut(s) 176, 320, 920
Asp718I GGTACC 1 cut(s) 1601
AspLEI GCGC 1 cut(s) 386
AspS9I GGNCC 3 cut(s) 726, 1361, 1689
AsuC2I CCSGG 1 cut(s) 1360
AsuHPI GGTGA 5 cut(s) 208, 274, 817, 1235, 1613
AvaII GGWCC 1 cut(s) 726
BaeGI GKGCMC 2 cut(s) 233, 601
BalI TGGCCA 3 cut(s) 143, 1490, 1517
BamHI GGATCC 1 cut(s) 1112
BanI GGYRCC 1 cut(s) 1601
BbsI GAAGAC 2 cut(s) 639, 1138
Bbv12I GWGCWC 1 cut(s) 398
BbvCI CCTCAGC 1 cut(s) 1532
BbvI GCAGC 6 cut(s) 763, 791, 1037, 1100, 1285, 1343
BccI CCATC 6 cut(s) 202, 370, 698, 844, 1379, 1438
BceAI ACGGC 1 cut(s) 57
BcgI CGANNNNNNTGC 2 cut(s) 163, 197
BciT130I CCWGG 2 cut(s) 131, 140
BciVI GTATCC 1 cut(s) 1517
BcnI CCSGG 1 cut(s) 1360
BcoDI GTCTC 3 cut(s) 521, 590, 1488
BfaI CTAG 3 cut(s) 804, 813, 986
BfmI CTRYAG 4 cut(s) 738, 777, 819, 1247
BfuAI ACCTGC 2 cut(s) 67, 389
BfuI GTATCC 1 cut(s) 1517
BglII AGATCT 1 cut(s) 554
BisI GCNGC 7 cut(s) 777, 780, 1051, 1089, 1299, 1332, 1696
BlpI GCTNAGC 1 cut(s) 1059
BlsI GCNGC 7 cut(s) 778, 781, 1052, 1090, 1300, 1333, 1697
BmcAI AGTACT 1 cut(s) 1400
Bme1390I CCNGG 3 cut(s) 131, 140, 1360
Bme18I GGWCC 1 cut(s) 726
BmgBI CACGTC 1 cut(s) 756
BmgT120I GGNCC 3 cut(s) 726, 1361, 1689
BmiI GGNNCC 2 cut(s) 1114, 1603
BmrFI CCNGG 3 cut(s) 131, 140, 1360
BmrI ACTGGG 1 cut(s) 1578
BmsI GCATC 2 cut(s) 262, 303
BmuI ACTGGG 1 cut(s) 1578
BpiI GAAGAC 2 cut(s) 639, 1138
Bpu10I CCTNAGC 1 cut(s) 1532
Bpu1102I GCTNAGC 1 cut(s) 1059
BpuEI CTTGAG 1 cut(s) 1646
BpuMI CCSGG 1 cut(s) 1360
BsaHI GRCGYC 1 cut(s) 993
BsaI GGTCTC 2 cut(s) 521, 1488
BsaJI CCNNGG 7 cut(s) 253, 706, 1108, 1287, 1302, 1518, 1589
BsaXI ACNNNNNCTCC 4 cut(s) 234, 264, 1450, 1480
Bsc4I CCNNNNNNNGG 2 cut(s) 460, 506
Bse118I RCCGGY 1 cut(s) 1129
Bse1I ACTGG 4 cut(s) 339, 855, 1573, 1643
Bse3DI GCAATG 3 cut(s) 656, 789, 1398
BseBI CCWGG 2 cut(s) 131, 140
BseDI CCNNGG 7 cut(s) 253, 706, 1108, 1287, 1302, 1518, 1589
BseGI GGATG 3 cut(s) 10, 194, 690
BseLI CCNNNNNNNGG 2 cut(s) 460, 506
BseMI GCAATG 3 cut(s) 656, 789, 1398
BseMII CTCAG 4 cut(s) 1073, 1089, 1546, 1551
BseNI ACTGG 4 cut(s) 339, 855, 1573, 1643
BseSI GKGCMC 2 cut(s) 233, 601
BseXI GCAGC 6 cut(s) 763, 791, 1037, 1100, 1285, 1343
BshFI GGCC 9 cut(s) 72, 143, 453, 1133, 1363, 1436, 1490, 1517, 1691
BshNI GGYRCC 1 cut(s) 1601
BsiHKAI GWGCWC 1 cut(s) 398
BsiSI CCGG 3 cut(s) 1130, 1359, 1437
BslFI GGGAC 3 cut(s) 818, 1109, 1184
BslI CCNNNNNNNGG 2 cut(s) 460, 506
BsmAI GTCTC 3 cut(s) 521, 590, 1488
BsmFI GGGAC 3 cut(s) 818, 1109, 1184
BsmI GAATGC 1 cut(s) 90
BsnI GGCC 9 cut(s) 72, 143, 453, 1133, 1363, 1436, 1490, 1517, 1691
Bso31I GGTCTC 2 cut(s) 521, 1488
Bsp1286I GDGCHC 3 cut(s) 233, 398, 601
Bsp143I GATC 7 cut(s) 554, 627, 750, 1112, 1167, 1420, 1709
Bsp1720I GCTNAGC 1 cut(s) 1059
Bsp19I CCATGG 2 cut(s) 1287, 1518
BspACI CCGC 8 cut(s) 500, 512, 594, 695, 1178, 1480, 1696, 1745
BspANI GGCC 9 cut(s) 72, 143, 453, 1133, 1363, 1436, 1490, 1517, 1691
BspCNI CTCAG 4 cut(s) 1072, 1088, 1545, 1550
BspHI TCATGA 1 cut(s) 1164
BspLI GGNNCC 2 cut(s) 1114, 1603
BspMAI CTGCAG 3 cut(s) 742, 781, 823
BspMI ACCTGC 2 cut(s) 67, 389
BspPI GGATC 4 cut(s) 635, 1107, 1120, 1162
BspQI GCTCTTC 1 cut(s) 704
BspT107I GGYRCC 1 cut(s) 1601
BspTNI GGTCTC 2 cut(s) 521, 1488
BsrBI CCGCTC 3 cut(s) 512, 697, 1180
BsrDI GCAATG 3 cut(s) 656, 789, 1398
BsrFI RCCGGY 1 cut(s) 1129
BsrI ACTGG 4 cut(s) 339, 855, 1573, 1643
BssAI RCCGGY 1 cut(s) 1129
BssECI CCNNGG 7 cut(s) 253, 706, 1108, 1287, 1302, 1518, 1589
BssMI GATC 7 cut(s) 554, 627, 750, 1112, 1167, 1420, 1709
BssNI GRCGYC 1 cut(s) 993
BssT1I CCWWGG 6 cut(s) 253, 706, 1287, 1302, 1518, 1589
Bst2UI CCWGG 2 cut(s) 131, 140
Bst4CI ACNGT 3 cut(s) 436, 519, 832
Bst6I CTCTTC 4 cut(s) 501, 704, 1163, 1430
BstACI GRCGYC 1 cut(s) 993
BstAPI GCANNNNNTGC 2 cut(s) 605, 1298
BstC8I GCNNGC 6 cut(s) 90, 151, 647, 1346, 1478, 1693
BstDEI CTNAG 7 cut(s) 106, 1007, 1059, 1075, 1472, 1532, 1537
BstDSI CCRYGG 2 cut(s) 1287, 1518
BstF5I GGATG 3 cut(s) 10, 194, 690
BstHHI GCGC 1 cut(s) 386
BstKTI GATC 7 cut(s) 557, 630, 753, 1115, 1170, 1423, 1712
BstMAI GTCTC 3 cut(s) 521, 590, 1488
BstMBI GATC 7 cut(s) 554, 627, 750, 1112, 1167, 1420, 1709
BstMWI GCNNNNNNNGC 4 cut(s) 140, 605, 1298, 1514
BstNI CCWGG 2 cut(s) 131, 140
BstNSI RCATGY 2 cut(s) 1480, 1618
BstSCI CCNGG 3 cut(s) 129, 138, 1358
BstSFI CTRYAG 4 cut(s) 738, 777, 819, 1247
BstSLI GKGCMC 2 cut(s) 233, 601
BstV1I GCAGC 6 cut(s) 763, 791, 1037, 1100, 1285, 1343
BstV2I GAAGAC 2 cut(s) 639, 1138
BstX2I RGATCY 2 cut(s) 554, 1112
BstXI CCANNNNNNTGG 1 cut(s) 226
BstYI RGATCY 2 cut(s) 554, 1112
BsuI GTATCC 1 cut(s) 1517
BsuRI GGCC 9 cut(s) 72, 143, 453, 1133, 1363, 1436, 1490, 1517, 1691
BtgI CCRYGG 2 cut(s) 1287, 1518
BtrI CACGTC 1 cut(s) 756
BtsCI GGATG 3 cut(s) 10, 194, 690
BtsI GCAGTG 3 cut(s) 816, 942, 972
BveI ACCTGC 2 cut(s) 67, 389
Cac8I GCNNGC 6 cut(s) 90, 151, 647, 1346, 1478, 1693
CaiI CAGNNNCTG 1 cut(s) 1298
CciI TCATGA 1 cut(s) 1164
CfoI GCGC 1 cut(s) 386
Cfr10I RCCGGY 1 cut(s) 1129
Cfr13I GGNCC 3 cut(s) 726, 1361, 1689
Csp6I GTAC 4 cut(s) 338, 1399, 1602, 1675
CviQI GTAC 4 cut(s) 338, 1399, 1602, 1675
DdeI CTNAG 7 cut(s) 106, 1007, 1059, 1075, 1472, 1532, 1537
DpnI GATC 7 cut(s) 556, 629, 752, 1114, 1169, 1422, 1711
DpnII GATC 7 cut(s) 554, 627, 750, 1112, 1167, 1420, 1709
EaeI YGGCCR 4 cut(s) 141, 1434, 1488, 1515
Eam1104I CTCTTC 4 cut(s) 501, 704, 1163, 1430
EarI CTCTTC 4 cut(s) 501, 704, 1163, 1430
EciI GGCGGA 2 cut(s) 489, 1760
Eco130I CCWWGG 6 cut(s) 253, 706, 1287, 1302, 1518, 1589
Eco147I AGGCCT 1 cut(s) 453
Eco31I GGTCTC 2 cut(s) 521, 1488
Eco47I GGWCC 1 cut(s) 726
Eco57I CTGAAG 2 cut(s) 389, 1482
EcoRI GAATTC 1 cut(s) 320
EcoRII CCWGG 2 cut(s) 129, 138
EcoT14I CCWWGG 6 cut(s) 253, 706, 1287, 1302, 1518, 1589
EcoT22I ATGCAT 1 cut(s) 186
ErhI CCWWGG 6 cut(s) 253, 706, 1287, 1302, 1518, 1589
FalI AAGNNNNNCTT 2 cut(s) 480, 512
FaqI GGGAC 3 cut(s) 818, 1109, 1184
FauI CCCGC 2 cut(s) 587, 702
FblI GTMKAC 1 cut(s) 1585
Fnu4HI GCNGC 7 cut(s) 777, 780, 1051, 1089, 1299, 1332, 1696
FokI GGATG 3 cut(s) 17, 181, 677
Fsp4HI GCNGC 7 cut(s) 777, 780, 1051, 1089, 1299, 1332, 1696
FspBI CTAG 3 cut(s) 804, 813, 986
GlaI GCGC 1 cut(s) 385
GluI GCNGC 7 cut(s) 777, 780, 1051, 1089, 1299, 1332, 1696
HaeIII GGCC 9 cut(s) 72, 143, 453, 1133, 1363, 1436, 1490, 1517, 1691
HapII CCGG 3 cut(s) 1130, 1359, 1437
HhaI GCGC 1 cut(s) 386
Hin1I GRCGYC 1 cut(s) 993
Hin6I GCGC 1 cut(s) 384
HinP1I GCGC 1 cut(s) 384
HinfI GANTC 3 cut(s) 851, 1011, 1236
HpaII CCGG 3 cut(s) 1130, 1359, 1437
HphI GGTGA 5 cut(s) 208, 274, 817, 1235, 1613
Hpy166II GTNNAC 5 cut(s) 332, 955, 1032, 1549, 1586
Hpy188I TCNGA 4 cut(s) 726, 750, 1112, 1767
Hpy188III TCNNGA 2 cut(s) 1165, 1315
Hpy8I GTNNAC 5 cut(s) 332, 955, 1032, 1549, 1586
Hpy99I CGWCG 1 cut(s) 1331
HpyAV CCTTC 4 cut(s) 26, 247, 537, 1762
HpyCH4III ACNGT 3 cut(s) 436, 519, 832
HpyCH4IV ACGT 5 cut(s) 755, 993, 1326, 1376, 1582
HpyF10VI GCNNNNNNNGC 4 cut(s) 140, 605, 1298, 1514
HpyF3I CTNAG 7 cut(s) 106, 1007, 1059, 1075, 1472, 1532, 1537
HpySE526I ACGT 5 cut(s) 755, 993, 1326, 1376, 1582
Hsp92I GRCGYC 1 cut(s) 993
HspAI GCGC 1 cut(s) 384
KpnI GGTACC 1 cut(s) 1605
Kzo9I GATC 7 cut(s) 554, 627, 750, 1112, 1167, 1420, 1709
LguI GCTCTTC 1 cut(s) 704
LmnI GCTCC 2 cut(s) 509, 1471
Lsp1109I GCAGC 6 cut(s) 763, 791, 1037, 1100, 1285, 1343
LweI GCATC 2 cut(s) 262, 303
MaeI CTAG 3 cut(s) 804, 813, 986
MaeII ACGT 5 cut(s) 755, 993, 1326, 1376, 1582
MaeIII GTNAC 6 cut(s) 214, 610, 823, 937, 963, 1216
MalI GATC 7 cut(s) 556, 629, 752, 1114, 1169, 1422, 1711
MbiI CCGCTC 3 cut(s) 512, 697, 1180
MboI GATC 7 cut(s) 554, 627, 750, 1112, 1167, 1420, 1709
MflI RGATCY 2 cut(s) 554, 1112
MhlI GDGCHC 3 cut(s) 233, 398, 601
MlsI TGGCCA 3 cut(s) 143, 1490, 1517
MluCI AATT 7 cut(s) 176, 220, 320, 678, 920, 1254, 1666
MluNI TGGCCA 3 cut(s) 143, 1490, 1517
MmeI TCCRAC 1 cut(s) 457
Mox20I TGGCCA 3 cut(s) 143, 1490, 1517
Mph1103I ATGCAT 1 cut(s) 186
MscI TGGCCA 3 cut(s) 143, 1490, 1517
MseI TTAA 4 cut(s) 420, 765, 927, 1774
MslI CAYNNNNRTG 3 cut(s) 758, 846, 1037
Msp20I TGGCCA 3 cut(s) 143, 1490, 1517
MspI CCGG 3 cut(s) 1130, 1359, 1437
MspR9I CCNGG 3 cut(s) 131, 140, 1360
Mva1269I GAATGC 1 cut(s) 90
MvaI CCWGG 2 cut(s) 131, 140
MwoI GCNNNNNNNGC 4 cut(s) 140, 605, 1298, 1514
NciI CCSGG 1 cut(s) 1360
NcoI CCATGG 2 cut(s) 1287, 1518
NdeII GATC 7 cut(s) 554, 627, 750, 1112, 1167, 1420, 1709
NlaIV GGNNCC 2 cut(s) 1114, 1603
NmeAIII GCCGAG 2 cut(s) 1389, 1394
NmuCI GTSAC 3 cut(s) 214, 823, 937
NsiI ATGCAT 1 cut(s) 186
NspI RCATGY 2 cut(s) 1480, 1618
PaeI GCATGC 1 cut(s) 1480
PagI TCATGA 1 cut(s) 1164
PceI AGGCCT 1 cut(s) 453
PciI ACATGT 1 cut(s) 1614
PciSI GCTCTTC 1 cut(s) 704
PctI GAATGC 1 cut(s) 90
PfeI GAWTC 3 cut(s) 851, 1011, 1236
PkrI GCNGC 7 cut(s) 778, 781, 1052, 1090, 1300, 1333, 1697
PscI ACATGT 1 cut(s) 1614
Psp6I CCWGG 2 cut(s) 129, 138
PspGI CCWGG 2 cut(s) 129, 138
PspN4I GGNNCC 2 cut(s) 1114, 1603
PspPI GGNCC 3 cut(s) 726, 1361, 1689
PsrI GAACNNNNNNTAC 2 cut(s) 119, 151
PstI CTGCAG 3 cut(s) 742, 781, 823
PstNI CAGNNNCTG 1 cut(s) 1298
PsuI RGATCY 2 cut(s) 554, 1112
RsaI GTAC 4 cut(s) 339, 1400, 1603, 1676
RsaNI GTAC 4 cut(s) 338, 1399, 1602, 1675
RseI CAYNNNNRTG 3 cut(s) 758, 846, 1037
SapI GCTCTTC 1 cut(s) 704
SaqAI TTAA 4 cut(s) 420, 765, 927, 1774
SatI GCNGC 7 cut(s) 777, 780, 1051, 1089, 1299, 1332, 1696
Sau3AI GATC 7 cut(s) 554, 627, 750, 1112, 1167, 1420, 1709
Sau96I GGNCC 3 cut(s) 726, 1361, 1689
SbfI CCTGCAGG 1 cut(s) 742
ScaI AGTACT 1 cut(s) 1400
ScrFI CCNGG 3 cut(s) 131, 140, 1360
SdaI CCTGCAGG 1 cut(s) 742
SduI GDGCHC 3 cut(s) 233, 398, 601
SfaNI GCATC 2 cut(s) 262, 303
SfcI CTRYAG 4 cut(s) 738, 777, 819, 1247
SinI GGWCC 1 cut(s) 726
SmiMI CAYNNNNRTG 3 cut(s) 758, 846, 1037
SmlI CTYRAG 1 cut(s) 1625
SmoI CTYRAG 1 cut(s) 1625
SphI GCATGC 1 cut(s) 1480
Sse8387I CCTGCAGG 1 cut(s) 742
Sse9I AATT 7 cut(s) 176, 220, 320, 678, 920, 1254, 1666
SseBI AGGCCT 1 cut(s) 453
SsiI CCGC 8 cut(s) 500, 512, 594, 695, 1178, 1480, 1696, 1745
SspMI CTAG 3 cut(s) 804, 813, 986
StuI AGGCCT 1 cut(s) 453
StyD4I CCNGG 3 cut(s) 129, 138, 1358
StyI CCWWGG 6 cut(s) 253, 706, 1287, 1302, 1518, 1589
TaaI ACNGT 3 cut(s) 436, 519, 832
TaiI ACGT 5 cut(s) 758, 996, 1329, 1379, 1585
TaqI TCGA 3 cut(s) 173, 630, 1308
TasI AATT 7 cut(s) 176, 220, 320, 678, 920, 1254, 1666
TatI WGTACW 2 cut(s) 1398, 1674
TauI GCSGC 1 cut(s) 1698
TfiI GAWTC 3 cut(s) 851, 1011, 1236
Tru1I TTAA 4 cut(s) 420, 765, 927, 1774
Tru9I TTAA 4 cut(s) 420, 765, 927, 1774
TseFI GTSAC 3 cut(s) 214, 823, 937
TseI GCWGC 6 cut(s) 776, 779, 1050, 1088, 1298, 1331
Tsp45I GTSAC 3 cut(s) 214, 823, 937
TspGWI ACGGA 1 cut(s) 522
VpaK11BI GGWCC 1 cut(s) 726
XapI RAATTY 3 cut(s) 176, 320, 920
XceI RCATGY 2 cut(s) 1480, 1618
XcmI CCANNNNNNNNNTGG 2 cut(s) 1228, 1285
XmiI GTMKAC 1 cut(s) 1585
XspI CTAG 3 cut(s) 804, 813, 986
ZraI GACGTC 1 cut(s) 994
ZrmI AGTACT 1 cut(s) 1400
Zsp2I ATGCAT 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.