FvH4_7g30570

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000065
Physical Location & Seq
Forward (+)
22230586 .. 22231636
1051 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g30570.t1

Sequence Viewer

Length: 669 bp
ATGGCGGAGAATAAGGAAGCAGCAGCAACATCTCCCTATCCGTTGATGCCCTCCGCCCCTAGCTACATGCGGAGCGATCAGGAAGCCGCAGCATCTGCCCCGCCGAGCGCGGAGGAGCTGCGTCACAAGAAGCGCATGAGGTGCCTTCTCTATGTATCCATCTTTGCCGTTTTCCAAGTTGTAGTCATAACAGTCTTTGCACTCACCGTGATGAAAATCAAGAGCCCTAAATTCCGGGTCCGGACGGCGTCTATCACTGGTTTTGAAGTCGGCAGCGCCTCGAATCCGTCGTTTAATTTGGAAATGGACGTTCATTTTGGGGTGAAGAACACCAACTTTGGTCACTTCGAGTATGAAGATGGCATTGTTGTGTTTACATATAGAGATGTGAGAATTGGTCAGACCAATGTGGAGGAGGAACGTGTTAGGGCAAGATCGACTAGGAAGGTGGACGTCTCATCGGTGGACTTGACTTCAAGAGGTTTGCCGGCAAACTCACGGTTGGGGAGTGATATTAGTACCGGGATTATTCCGATTACGATATCGTCGAAGTTGGATGGGAAGATTCATCTGATGAAGATTATCAAGAAGAAGAAGTCTGCGCAGATGAACTGCACCATGGAAGTTGTTCTGGCCACAAAGTCTGTTCAAAATGTAGTATGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

223

Amino Acids

24.54

Weight (kDa)

9.62

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 106 - 206 1.9e-07 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 456
Acc16I TGCGCA 1 cut(s) 603
AccB1I GGYRCC 1 cut(s) 141
AccII CGCG 1 cut(s) 110
AccIII TCCGGA 1 cut(s) 240
AciI CCGC 6 cut(s) 5, 54, 70, 87, 101, 110
AcoI YGGCCR 1 cut(s) 633
AcsI RAATTY 1 cut(s) 230
AcyI GRCGYC 2 cut(s) 248, 453
AfaI GTAC 1 cut(s) 520
AflIII ACRYGT 1 cut(s) 421
AgsI TTSAA 3 cut(s) 266, 477, 650
AluBI AGCT 2 cut(s) 63, 118
AluI AGCT 2 cut(s) 63, 118
Alw26I GTCTC 1 cut(s) 460
AlwNI CAGNNNCTG 1 cut(s) 95
Aor13HI TCCGGA 1 cut(s) 240
AoxI GGCC 1 cut(s) 633
ApeKI GCWGC 5 cut(s) 20, 23, 89, 118, 273
ApoI RAATTY 1 cut(s) 230
ArsI GACNNNNNNTTYG 2 cut(s) 299, 331
Asp700I GAANNNNTTC 1 cut(s) 627
AspLEI GCGC 4 cut(s) 110, 135, 278, 604
AspS9I GGNCC 1 cut(s) 238
AsuC2I CCSGG 2 cut(s) 236, 523
AsuHPI GGTGA 2 cut(s) 196, 334
AvaII GGWCC 1 cut(s) 238
BalI TGGCCA 1 cut(s) 635
BanI GGYRCC 1 cut(s) 141
BanII GRGCYC 1 cut(s) 227
BbvI GCAGC 5 cut(s) 32, 35, 101, 105, 285
BccI CCATC 3 cut(s) 167, 353, 551
BceAI ACGGC 2 cut(s) 152, 261
BciVI GTATCC 1 cut(s) 166
BcnI CCSGG 2 cut(s) 236, 523
BcoDI GTCTC 1 cut(s) 460
BfaI CTAG 2 cut(s) 60, 441
BfoI RGCGCY 1 cut(s) 279
BfuI GTATCC 1 cut(s) 166
BisI GCNGC 6 cut(s) 21, 24, 87, 90, 119, 274
BlsI GCNGC 6 cut(s) 22, 25, 88, 91, 120, 275
Bme1390I CCNGG 2 cut(s) 236, 523
Bme18I GGWCC 1 cut(s) 238
BmgT120I GGNCC 1 cut(s) 238
BmiI GGNNCC 2 cut(s) 143, 239
BmrFI CCNGG 2 cut(s) 236, 523
BmsI GCATC 2 cut(s) 36, 101
BpuMI CCSGG 2 cut(s) 236, 523
BsaBI GATNNNNATC 1 cut(s) 215
BsaHI GRCGYC 2 cut(s) 248, 453
BsaJI CCNNGG 1 cut(s) 618
BsaWI WCCGGW 1 cut(s) 240
Bse118I RCCGGY 1 cut(s) 487
Bse1I ACTGG 1 cut(s) 262
Bse8I GATNNNNATC 1 cut(s) 215
BseAI TCCGGA 1 cut(s) 240
BseDI CCNNGG 1 cut(s) 618
BseGI GGATG 1 cut(s) 562
BseJI GATNNNNATC 1 cut(s) 215
BseNI ACTGG 1 cut(s) 262
BseRI GAGGAG 2 cut(s) 128, 428
BseXI GCAGC 5 cut(s) 32, 35, 101, 105, 285
BsgI GTGCAG 1 cut(s) 598
Bsh1236I CGCG 1 cut(s) 110
BshFI GGCC 1 cut(s) 635
BshNI GGYRCC 1 cut(s) 141
BsiSI CCGG 4 cut(s) 235, 241, 488, 522
BsmAI GTCTC 1 cut(s) 460
BsmBI CGTCTC 1 cut(s) 460
BsnI GGCC 1 cut(s) 635
Bsp1286I GDGCHC 1 cut(s) 227
Bsp13I TCCGGA 1 cut(s) 240
Bsp143I GATC 2 cut(s) 76, 434
Bsp19I CCATGG 1 cut(s) 618
BspACI CCGC 6 cut(s) 5, 54, 70, 87, 101, 110
BspANI GGCC 1 cut(s) 635
BspEI TCCGGA 1 cut(s) 240
BspFNI CGCG 1 cut(s) 110
BspLI GGNNCC 2 cut(s) 143, 239
BspT107I GGYRCC 1 cut(s) 141
BsrFI RCCGGY 1 cut(s) 487
BsrI ACTGG 1 cut(s) 262
BssAI RCCGGY 1 cut(s) 487
BssECI CCNNGG 1 cut(s) 618
BssMI GATC 2 cut(s) 76, 434
BssNI GRCGYC 2 cut(s) 248, 453
BssT1I CCWWGG 1 cut(s) 618
Bst4CI ACNGT 3 cut(s) 193, 208, 501
BstACI GRCGYC 2 cut(s) 248, 453
BstAPI GCANNNNNTGC 2 cut(s) 95, 141
BstC8I GCNNGC 1 cut(s) 489
BstDSI CCRYGG 1 cut(s) 618
BstF5I GGATG 1 cut(s) 562
BstFNI CGCG 1 cut(s) 110
BstH2I RGCGCY 1 cut(s) 279
BstHHI GCGC 4 cut(s) 110, 135, 278, 604
BstKTI GATC 2 cut(s) 79, 437
BstMAI GTCTC 1 cut(s) 460
BstMBI GATC 2 cut(s) 76, 434
BstMWI GCNNNNNNNGC 2 cut(s) 95, 141
BstNSI RCATGY 1 cut(s) 70
BstSCI CCNGG 2 cut(s) 234, 521
BstUI CGCG 1 cut(s) 110
BstV1I GCAGC 5 cut(s) 32, 35, 101, 105, 285
BsuI GTATCC 1 cut(s) 166
BsuRI GGCC 1 cut(s) 635
BtgI CCRYGG 1 cut(s) 618
BtsCI GGATG 1 cut(s) 562
BtsIMutI CAGTG 1 cut(s) 255
Cac8I GCNNGC 1 cut(s) 489
CaiI CAGNNNCTG 1 cut(s) 95
CfoI GCGC 4 cut(s) 110, 135, 278, 604
Cfr10I RCCGGY 1 cut(s) 487
Cfr13I GGNCC 1 cut(s) 238
CseI GACGC 2 cut(s) 110, 237
Csp6I GTAC 1 cut(s) 519
CviAII CATG 3 cut(s) 67, 136, 619
CviJI RGCY 5 cut(s) 63, 86, 118, 225, 635
CviKI_1 RGCY 5 cut(s) 63, 86, 118, 225, 635
CviQI GTAC 1 cut(s) 519
DpnI GATC 2 cut(s) 78, 436
DpnII GATC 2 cut(s) 76, 434
EaeI YGGCCR 1 cut(s) 633
EciI GGCGGA 2 cut(s) 20, 43
Eco130I CCWWGG 1 cut(s) 618
Eco24I GRGCYC 1 cut(s) 227
Eco32I GATATC 1 cut(s) 543
Eco47I GGWCC 1 cut(s) 238
EcoRV GATATC 1 cut(s) 543
EcoT14I CCWWGG 1 cut(s) 618
EcoT38I GRGCYC 1 cut(s) 227
ErhI CCWWGG 1 cut(s) 618
Esp3I CGTCTC 1 cut(s) 460
FaeI CATG 3 cut(s) 70, 139, 622
FaiI YATR 9 cut(s) 68, 137, 153, 188, 354, 379, 381, 620, 661
FatI CATG 3 cut(s) 66, 135, 618
FauI CCCGC 1 cut(s) 108
Fnu4HI GCNGC 6 cut(s) 21, 24, 87, 90, 119, 274
FokI GGATG 1 cut(s) 569
FriOI GRGCYC 1 cut(s) 227
Fsp4HI GCNGC 6 cut(s) 21, 24, 87, 90, 119, 274
FspBI CTAG 2 cut(s) 60, 441
FspI TGCGCA 1 cut(s) 603
GlaI GCGC 4 cut(s) 109, 134, 277, 603
GluI GCNGC 6 cut(s) 21, 24, 87, 90, 119, 274
HaeII RGCGCY 1 cut(s) 279
HaeIII GGCC 1 cut(s) 635
HapII CCGG 4 cut(s) 235, 241, 488, 522
HgaI GACGC 2 cut(s) 110, 237
HhaI GCGC 4 cut(s) 110, 135, 278, 604
Hin1I GRCGYC 2 cut(s) 248, 453
Hin1II CATG 3 cut(s) 70, 139, 622
Hin6I GCGC 4 cut(s) 108, 133, 276, 602
HinP1I GCGC 4 cut(s) 108, 133, 276, 602
HinfI GANTC 2 cut(s) 283, 565
HpaII CCGG 4 cut(s) 235, 241, 488, 522
HphI GGTGA 2 cut(s) 196, 334
Hpy166II GTNNAC 3 cut(s) 375, 451, 466
Hpy188I TCNGA 3 cut(s) 402, 534, 573
Hpy188III TCNNGA 5 cut(s) 80, 220, 241, 477, 586
Hpy8I GTNNAC 3 cut(s) 375, 451, 466
Hpy99I CGWCG 2 cut(s) 292, 550
HpyAV CCTTC 2 cut(s) 155, 439
HpyCH4III ACNGT 3 cut(s) 193, 208, 501
HpyCH4IV ACGT 3 cut(s) 309, 421, 453
HpyCH4V TGCA 3 cut(s) 200, 615, 663
HpyF10VI GCNNNNNNNGC 2 cut(s) 95, 141
HpySE526I ACGT 3 cut(s) 309, 421, 453
Hsp92I GRCGYC 2 cut(s) 248, 453
Hsp92II CATG 3 cut(s) 70, 139, 622
HspAI GCGC 4 cut(s) 108, 133, 276, 602
Kpn2I TCCGGA 1 cut(s) 240
KroI GCCGGC 1 cut(s) 487
KroNI GCCGGC 1 cut(s) 489
Kzo9I GATC 2 cut(s) 76, 434
LmnI GCTCC 2 cut(s) 72, 115
LpnPI CCDG 7 cut(s) 65, 243, 248, 254, 501, 535, 617
Lsp1109I GCAGC 5 cut(s) 32, 35, 101, 105, 285
LweI GCATC 2 cut(s) 36, 101
MaeI CTAG 2 cut(s) 60, 441
MaeII ACGT 3 cut(s) 309, 421, 453
MaeIII GTNAC 2 cut(s) 122, 341
MalI GATC 2 cut(s) 78, 436
MboI GATC 2 cut(s) 76, 434
MboII GAAGA 6 cut(s) 337, 368, 574, 589, 601, 604
MhlI GDGCHC 1 cut(s) 227
MlsI TGGCCA 1 cut(s) 635
MluCI AATT 3 cut(s) 230, 295, 393
MluNI TGGCCA 1 cut(s) 635
MmeI TCCRAC 1 cut(s) 534
MnlI CCTC 7 cut(s) 61, 106, 132, 289, 406, 409, 473
Mox20I TGGCCA 1 cut(s) 635
MroI TCCGGA 1 cut(s) 240
MroNI GCCGGC 1 cut(s) 487
MroXI GAANNNNTTC 1 cut(s) 627
MscI TGGCCA 1 cut(s) 635
MseI TTAA 1 cut(s) 294
MslI CAYNNNNRTG 2 cut(s) 209, 368
Msp20I TGGCCA 1 cut(s) 635
MspI CCGG 4 cut(s) 235, 241, 488, 522
MspR9I CCNGG 2 cut(s) 236, 523
MvnI CGCG 1 cut(s) 110
MwoI GCNNNNNNNGC 2 cut(s) 95, 141
NaeI GCCGGC 1 cut(s) 489
NciI CCSGG 2 cut(s) 236, 523
NcoI CCATGG 1 cut(s) 618
NdeII GATC 2 cut(s) 76, 434
NgoMIV GCCGGC 1 cut(s) 487
NlaIII CATG 3 cut(s) 70, 139, 622
NlaIV GGNNCC 2 cut(s) 143, 239
NmeAIII GCCGAG 1 cut(s) 129
NmuCI GTSAC 2 cut(s) 122, 341
NsbI TGCGCA 1 cut(s) 603
NspI RCATGY 1 cut(s) 70
PcsI WCGNNNNNNNCGW 2 cut(s) 287, 545
PdiI GCCGGC 1 cut(s) 489
PdmI GAANNNNTTC 1 cut(s) 627
PfeI GAWTC 2 cut(s) 283, 565
PflFI GACNNNGTC 1 cut(s) 247
PkrI GCNGC 6 cut(s) 22, 25, 88, 91, 120, 275
PspN4I GGNNCC 2 cut(s) 143, 239
PspPI GGNCC 1 cut(s) 238
PstNI CAGNNNCTG 1 cut(s) 95
PsyI GACNNNGTC 1 cut(s) 247
RsaI GTAC 1 cut(s) 520
RsaNI GTAC 1 cut(s) 519
RseI CAYNNNNRTG 2 cut(s) 209, 368
SaqAI TTAA 1 cut(s) 294
SatI GCNGC 6 cut(s) 21, 24, 87, 90, 119, 274
Sau3AI GATC 2 cut(s) 76, 434
Sau96I GGNCC 1 cut(s) 238
ScrFI CCNGG 2 cut(s) 236, 523
SduI GDGCHC 1 cut(s) 227
SetI ASST 8 cut(s) 65, 120, 143, 312, 424, 450, 456, 484
SfaNI GCATC 2 cut(s) 36, 101
SinI GGWCC 1 cut(s) 238
SmiMI CAYNNNNRTG 2 cut(s) 209, 368
Sse9I AATT 3 cut(s) 230, 295, 393
SsiI CCGC 6 cut(s) 5, 54, 70, 87, 101, 110
SspMI CTAG 2 cut(s) 60, 441
StyD4I CCNGG 2 cut(s) 234, 521
StyI CCWWGG 1 cut(s) 618
TaaI ACNGT 3 cut(s) 193, 208, 501
TaiI ACGT 3 cut(s) 312, 424, 456
TaqI TCGA 4 cut(s) 281, 348, 437, 548
TasI AATT 3 cut(s) 230, 295, 393
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 2 cut(s) 283, 565
Tru1I TTAA 1 cut(s) 294
Tru9I TTAA 1 cut(s) 294
TscAI CASTG 1 cut(s) 262
TseFI GTSAC 2 cut(s) 122, 341
TseI GCWGC 5 cut(s) 20, 23, 89, 118, 273
Tsp45I GTSAC 2 cut(s) 122, 341
TspDTI ATGAA 6 cut(s) 227, 302, 369, 557, 590, 623
TspGWI ACGGA 2 cut(s) 30, 276
TspRI CASTG 1 cut(s) 262
Tth111I GACNNNGTC 1 cut(s) 247
VpaK11BI GGWCC 1 cut(s) 238
XapI RAATTY 1 cut(s) 230
XceI RCATGY 1 cut(s) 70
XmnI GAANNNNTTC 1 cut(s) 627
XspI CTAG 2 cut(s) 60, 441
ZraI GACGTC 1 cut(s) 454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.