Rorug01G0411900

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000065
Physical Location & Seq
Forward (+)
51690141 .. 51693954
3814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0411900.1

Sequence Viewer

Length: 1440 bp
ATGGAAGGGGGGAGGAGGATATCGGCGAGTCCGCGGCCGTGTAGTGGCCGGAGGGTGGTGGCGGCGAGGAAGCGACCCCGTATTGGCGGCGTGGACGGGTTCGTCAACAGCGTTAAGAAGCTTCAGCGACGCGAAATCAGCTCCAAGCGTGACCGTGCTTTCACTATGAGCGATGCCCAGGAGAGGTTTCGGAATATTCGTCTCCAGGAGGAATATGATACCCATGATCCAAAAGGTCATTGTGCCATGGTTCTGCCTTTTCTGCGAAAGAGGTCGAAAATTATTGAAATTGTAGCAGCACGTGACATTGTGTTTGCTCTTGCGCAGTCTGGTGTTTGTGCAGCGTTTAGCCGAGAAACCAATCAGAGGATATGCTTTCTGAATGTCAGTCCCGACGAAGTTATAAGAAGCTTGTTTTATAATAAAAACAATGACTCACTTATCACAGTTTCAGTTTATGCTTCAGACAATTTCAGTTCTTTGAAATGTAGAAGCACAAGGATTGAATACATACGAAGGGGTAAACCAGATGCTGGCTTTGCTCTTTTTGAGTCTGAGTCACTAAAGTGGCCTGGATTTGTAGAGTTCGATGATGTAAATGGGAAGGTTCTCACTTACTCTGCACAAGATAGTATATACAAGGTGTTTGATCTTAAAAACTATACAATGTTGTACTCCATATCAGATAAACATGTCCAAGAAATTAAGATTAGTCCGGGGATCATGTTGTTAATTTTCAATAAAGCTAGTAGCCATGTTCCTCTCAAGATTCTTTCTATAGAGGATGGTAGTGTTCTCAAATCCTTCAACCATCTACTTCATCGGAATAAGAAGGTAGATTTCATTGAACAGTTCAATGAAAAGCTTCTTGTAAAACAAGAAAATGAGAACCTCCAGATTCTTGATGTTCGCAATTCTGAGATGACAGAAGTTAGCAAAAGTGAATTCATGACACCATCGGCTTTTATATTTCTGTACGAGAATCAGTTATTTTTAACGTTTCGTAATCGTACTGTGGCTGTTTGGAACTTTCGAGGGGAGCTTGTGACTTCGTTTGAGGATCATCTTTTGTGGCATCCCGACTGCAATACTAATAACATATATATTACTAGTGACCAGGATCTTATTATTTCTTACTGCAAGGCTGATTCTGATGATCCATTAGCTGAAGGAAATGCAGGATCCATCAATATCAGCAACATTTTGACAGGGAAATGCCTTGCTAAAATAAAAGCCAGCAAGAATGTGGAAAATGAATGCAGTTGTAGTGGTGACTGTTGTGGAAGCAGTTGCAGTTCCAAGAAGCGTGCCCAGTCATCCAGAATTAGAAGTACAGTCGCAGAAGCCTTGGAAGATATTACTGCTCTCTTCTACGATGAAGAGCGCAACGAGATCTATACCGGCAATAGGCTCGGTCTAGTTCATGTATGGTCTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

479

Amino Acids

54.42

Weight (kDa)

8.56

Isoelectric Point (pI)

53.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7899 PF25463 52 - 477 1.6e-227 Domain of unknown function (DUF7899)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 404, 420
AasI GACNNNNNNGTC 1 cut(s) 101
Acc16I TGCGCA 1 cut(s) 324
AccB7I CCANNNNNTGG 1 cut(s) 533
AccII CGCG 2 cut(s) 34, 132
AciI CCGC 4 cut(s) 32, 34, 62, 87
AclI AACGTT 1 cut(s) 998
AclWI GGATC 7 cut(s) 221, 728, 1068, 1128, 1151, 1176, 1189
AcoI YGGCCR 2 cut(s) 35, 46
AcsI RAATTY 1 cut(s) 944
AcuI CTGAAG 3 cut(s) 107, 447, 1188
AcvI CACGTG 1 cut(s) 302
AfaI GTAC 4 cut(s) 674, 977, 1012, 1333
AfiI CCNNNNNNNGG 7 cut(s) 44, 55, 83, 183, 366, 533, 1407
AflIII ACRYGT 1 cut(s) 691
AgsI TTSAA 7 cut(s) 287, 484, 506, 739, 808, 848, 856
AhlI ACTAGT 1 cut(s) 1109
AjnI CCWGG 4 cut(s) 177, 204, 571, 1116
AleI CACNNNNGTG 1 cut(s) 565
AluBI AGCT 7 cut(s) 121, 141, 411, 746, 865, 1042, 1166
AluI AGCT 7 cut(s) 121, 141, 411, 746, 865, 1042, 1166
Alw26I GTCTC 1 cut(s) 206
AlwI GGATC 7 cut(s) 221, 728, 1068, 1128, 1151, 1176, 1189
AlwNI CAGNNNCTG 1 cut(s) 533
AoxI GGCC 3 cut(s) 35, 46, 569
ApeKI GCWGC 2 cut(s) 296, 341
ApoI RAATTY 1 cut(s) 944
ArsI GACNNNNNNTTYG 2 cut(s) 296, 328
Asp700I GAANNNNTTC 1 cut(s) 864
AspLEI GCGC 2 cut(s) 325, 1386
AsuC2I CCSGG 1 cut(s) 717
AsuHPI GGTGA 1 cut(s) 1283
BaeGI GKGCMC 1 cut(s) 1312
BamHI GGATCC 1 cut(s) 1181
BbrPI CACGTG 1 cut(s) 302
BbvI GCAGC 2 cut(s) 308, 353
BccI CCATC 4 cut(s) 779, 819, 964, 1193
BceAI ACGGC 1 cut(s) 22
BcgI CGANNNNNNTGC 2 cut(s) 1393, 1427
BciT130I CCWGG 4 cut(s) 179, 206, 573, 1118
BcnI CCSGG 1 cut(s) 717
BcoDI GTCTC 1 cut(s) 206
BcuI ACTAGT 1 cut(s) 1109
BfaI CTAG 3 cut(s) 747, 1110, 1418
BfmI CTRYAG 1 cut(s) 777
BglII AGATCT 1 cut(s) 1392
BisI GCNGC 5 cut(s) 35, 63, 88, 297, 342
BlsI GCNGC 5 cut(s) 36, 64, 89, 298, 343
Bme1390I CCNGG 5 cut(s) 179, 206, 573, 717, 1118
BmiI GGNNCC 1 cut(s) 1183
BmrFI CCNGG 5 cut(s) 179, 206, 573, 717, 1118
BmrI ACTGGG 1 cut(s) 1306
BmsI GCATC 3 cut(s) 163, 520, 1084
BmuI ACTGGG 1 cut(s) 1306
BpmI CTGGAG 2 cut(s) 188, 878
BpuEI CTTGAG 1 cut(s) 749
BpuMI CCSGG 1 cut(s) 717
BsaAI YACGTR 1 cut(s) 302
BsaJI CCNNGG 5 cut(s) 32, 177, 246, 716, 1347
Bsc4I CCNNNNNNNGG 7 cut(s) 44, 55, 83, 183, 366, 533, 1407
Bse118I RCCGGY 1 cut(s) 1400
Bse1I ACTGG 1 cut(s) 1312
BseBI CCWGG 4 cut(s) 179, 206, 573, 1118
BseDI CCNNGG 5 cut(s) 32, 177, 246, 716, 1347
BseGI GGATG 3 cut(s) 790, 1075, 1316
BseLI CCNNNNNNNGG 7 cut(s) 44, 55, 83, 183, 366, 533, 1407
BseMII CTCAG 2 cut(s) 546, 909
BseNI ACTGG 1 cut(s) 1312
BseRI GAGGAG 1 cut(s) 28
BseSI GKGCMC 1 cut(s) 1312
BseX3I CGGCCG 1 cut(s) 35
BseXI GCAGC 2 cut(s) 308, 353
BsgI GTGCAG 2 cut(s) 360, 606
Bsh1236I CGCG 2 cut(s) 34, 132
Bsh1285I CGRYCG 1 cut(s) 38
BshFI GGCC 3 cut(s) 37, 48, 571
BsiEI CGRYCG 1 cut(s) 38
BsiSI CCGG 3 cut(s) 49, 716, 1401
BslFI GGGAC 1 cut(s) 375
BslI CCNNNNNNNGG 7 cut(s) 44, 55, 83, 183, 366, 533, 1407
BsmAI GTCTC 1 cut(s) 206
BsmBI CGTCTC 1 cut(s) 206
BsmFI GGGAC 1 cut(s) 375
BsmI GAATGC 1 cut(s) 1262
BsnI GGCC 3 cut(s) 37, 48, 571
Bsp1286I GDGCHC 1 cut(s) 1312
Bsp143I GATC 8 cut(s) 226, 649, 720, 1060, 1120, 1156, 1181, 1392
Bsp19I CCATGG 1 cut(s) 246
BspACI CCGC 4 cut(s) 32, 34, 62, 87
BspANI GGCC 3 cut(s) 37, 48, 571
BspCNI CTCAG 2 cut(s) 547, 910
BspFNI CGCG 2 cut(s) 34, 132
BspHI TCATGA 1 cut(s) 948
BspLI GGNNCC 1 cut(s) 1183
BspPI GGATC 7 cut(s) 221, 728, 1068, 1128, 1151, 1176, 1189
BspQI GCTCTTC 1 cut(s) 1374
BsrFI RCCGGY 1 cut(s) 1400
BsrI ACTGG 1 cut(s) 1312
BssAI RCCGGY 1 cut(s) 1400
BssECI CCNNGG 5 cut(s) 32, 177, 246, 716, 1347
BssMI GATC 8 cut(s) 226, 649, 720, 1060, 1120, 1156, 1181, 1392
BssT1I CCWWGG 2 cut(s) 246, 1347
Bst2UI CCWGG 4 cut(s) 179, 206, 573, 1118
Bst4CI ACNGT 6 cut(s) 155, 448, 852, 1015, 1277, 1336
Bst6I CTCTTC 2 cut(s) 1373, 1374
BstBAI YACGTR 1 cut(s) 302
BstC8I GCNNGC 3 cut(s) 535, 1237, 1308
BstDEI CTNAG 2 cut(s) 555, 918
BstDSI CCRYGG 2 cut(s) 32, 246
BstF5I GGATG 3 cut(s) 790, 1075, 1316
BstFNI CGCG 2 cut(s) 34, 132
BstHHI GCGC 2 cut(s) 325, 1386
BstKTI GATC 8 cut(s) 229, 652, 723, 1063, 1123, 1159, 1184, 1395
BstMAI GTCTC 1 cut(s) 206
BstMBI GATC 8 cut(s) 226, 649, 720, 1060, 1120, 1156, 1181, 1392
BstMCI CGRYCG 1 cut(s) 38
BstMWI GCNNNNNNNGC 3 cut(s) 138, 262, 539
BstNI CCWGG 4 cut(s) 179, 206, 573, 1118
BstNSI RCATGY 1 cut(s) 695
BstSCI CCNGG 5 cut(s) 177, 204, 571, 715, 1116
BstSFI CTRYAG 1 cut(s) 777
BstSLI GKGCMC 1 cut(s) 1312
BstUI CGCG 2 cut(s) 34, 132
BstV1I GCAGC 2 cut(s) 308, 353
BstX2I RGATCY 3 cut(s) 1120, 1181, 1392
BstYI RGATCY 3 cut(s) 1120, 1181, 1392
BstZI CGGCCG 1 cut(s) 35
BsuRI GGCC 3 cut(s) 37, 48, 571
BtgI CCRYGG 2 cut(s) 32, 246
BtgZI GCGATG 1 cut(s) 186
BtsCI GGATG 3 cut(s) 790, 1075, 1316
Cac8I GCNNGC 3 cut(s) 535, 1237, 1308
CaiI CAGNNNCTG 1 cut(s) 533
CciI TCATGA 1 cut(s) 948
CfoI GCGC 2 cut(s) 325, 1386
Cfr10I RCCGGY 1 cut(s) 1400
Cfr42I CCGCGG 1 cut(s) 35
CseI GACGC 1 cut(s) 138
Csp6I GTAC 4 cut(s) 673, 976, 1011, 1332
CviAII CATG 7 cut(s) 224, 247, 692, 724, 755, 949, 1424
CviQI GTAC 4 cut(s) 673, 976, 1011, 1332
DdeI CTNAG 2 cut(s) 555, 918
DpnI GATC 8 cut(s) 228, 651, 722, 1062, 1122, 1158, 1183, 1394
DpnII GATC 8 cut(s) 226, 649, 720, 1060, 1120, 1156, 1181, 1392
DrdI GACNNNNNNGTC 1 cut(s) 101
DseDI GACNNNNNNGTC 1 cut(s) 101
EaeI YGGCCR 2 cut(s) 35, 46
EagI CGGCCG 1 cut(s) 35
Eam1104I CTCTTC 2 cut(s) 1373, 1374
EarI CTCTTC 2 cut(s) 1373, 1374
EclXI CGGCCG 1 cut(s) 35
Eco130I CCWWGG 2 cut(s) 246, 1347
Eco32I GATATC 1 cut(s) 21
Eco52I CGGCCG 1 cut(s) 35
Eco57I CTGAAG 3 cut(s) 107, 447, 1188
Eco72I CACGTG 1 cut(s) 302
EcoRI GAATTC 1 cut(s) 944
EcoRII CCWGG 4 cut(s) 177, 204, 571, 1116
EcoRV GATATC 1 cut(s) 21
EcoT14I CCWWGG 2 cut(s) 246, 1347
ErhI CCWWGG 2 cut(s) 246, 1347
Esp3I CGTCTC 1 cut(s) 206
FaeI CATG 7 cut(s) 227, 250, 695, 727, 758, 952, 1427
FaqI GGGAC 1 cut(s) 375
FatI CATG 7 cut(s) 223, 246, 691, 723, 754, 948, 1423
Fnu4HI GCNGC 5 cut(s) 35, 63, 88, 297, 342
FokI GGATG 3 cut(s) 797, 1062, 1303
Fsp4HI GCNGC 5 cut(s) 35, 63, 88, 297, 342
FspBI CTAG 3 cut(s) 747, 1110, 1418
FspI TGCGCA 1 cut(s) 324
GlaI GCGC 2 cut(s) 324, 1385
GluI GCNGC 5 cut(s) 35, 63, 88, 297, 342
GsuI CTGGAG 2 cut(s) 188, 878
HaeIII GGCC 3 cut(s) 37, 48, 571
HapII CCGG 3 cut(s) 49, 716, 1401
HgaI GACGC 1 cut(s) 138
HhaI GCGC 2 cut(s) 325, 1386
Hin1II CATG 7 cut(s) 227, 250, 695, 727, 758, 952, 1427
Hin6I GCGC 2 cut(s) 323, 1384
HinP1I GCGC 2 cut(s) 323, 1384
HincII GTYRAC 1 cut(s) 106
HindII GTYRAC 1 cut(s) 106
HindIII AAGCTT 3 cut(s) 119, 409, 863
HinfI GANTC 8 cut(s) 28, 434, 551, 557, 769, 898, 982, 1148
HpaII CCGG 3 cut(s) 49, 716, 1401
HphI GGTGA 1 cut(s) 1283
Hpy166II GTNNAC 3 cut(s) 94, 106, 524
Hpy188I TCNGA 9 cut(s) 192, 366, 381, 466, 556, 685, 825, 919, 1153
Hpy188III TCNNGA 7 cut(s) 392, 766, 895, 902, 949, 1079, 1320
Hpy8I GTNNAC 3 cut(s) 94, 106, 524
Hpy99I CGWCG 2 cut(s) 132, 398
HpyAV CCTTC 5 cut(s) 510, 598, 814, 826, 1163
HpyCH4III ACNGT 6 cut(s) 155, 448, 852, 1015, 1277, 1336
HpyCH4IV ACGT 2 cut(s) 301, 998
HpyCH4V TGCA 7 cut(s) 341, 623, 1086, 1140, 1178, 1260, 1293
HpyF10VI GCNNNNNNNGC 3 cut(s) 138, 262, 539
HpyF3I CTNAG 2 cut(s) 555, 918
HpySE526I ACGT 2 cut(s) 301, 998
Hsp92II CATG 7 cut(s) 227, 250, 695, 727, 758, 952, 1427
HspAI GCGC 2 cut(s) 323, 1384
KspI CCGCGG 1 cut(s) 35
Kzo9I GATC 8 cut(s) 226, 649, 720, 1060, 1120, 1156, 1181, 1392
LguI GCTCTTC 1 cut(s) 1374
LmnI GCTCC 2 cut(s) 146, 1039
Lsp1109I GCAGC 2 cut(s) 308, 353
LweI GCATC 3 cut(s) 163, 520, 1084
MaeI CTAG 3 cut(s) 747, 1110, 1418
MaeII ACGT 2 cut(s) 301, 998
MaeIII GTNAC 6 cut(s) 149, 302, 558, 1045, 1112, 1271
MalI GATC 8 cut(s) 228, 651, 722, 1062, 1122, 1158, 1183, 1394
MboI GATC 8 cut(s) 226, 649, 720, 1060, 1120, 1156, 1181, 1392
MboII GAAGA 3 cut(s) 1360, 1364, 1391
MflI RGATCY 3 cut(s) 1120, 1181, 1392
MhlI GDGCHC 1 cut(s) 1312
MluCI AATT 9 cut(s) 279, 288, 469, 702, 732, 913, 944, 1323, 1435
MlyI GAGTC 4 cut(s) 37, 428, 560, 566
MroXI GAANNNNTTC 1 cut(s) 864
MseI TTAA 6 cut(s) 114, 654, 705, 731, 995, 1438
MslI CAYNNNNRTG 1 cut(s) 565
MspA1I CMGCKG 1 cut(s) 34
MspI CCGG 3 cut(s) 49, 716, 1401
MspR9I CCNGG 5 cut(s) 179, 206, 573, 717, 1118
Mva1269I GAATGC 1 cut(s) 1262
MvaI CCWGG 4 cut(s) 179, 206, 573, 1118
MvnI CGCG 2 cut(s) 34, 132
MwoI GCNNNNNNNGC 3 cut(s) 138, 262, 539
NciI CCSGG 1 cut(s) 717
NcoI CCATGG 1 cut(s) 246
NdeII GATC 8 cut(s) 226, 649, 720, 1060, 1120, 1156, 1181, 1392
NlaIII CATG 7 cut(s) 227, 250, 695, 727, 758, 952, 1427
NlaIV GGNNCC 1 cut(s) 1183
NmeAIII GCCGAG 1 cut(s) 377
NmuCI GTSAC 6 cut(s) 149, 302, 558, 1045, 1112, 1271
NsbI TGCGCA 1 cut(s) 324
NspI RCATGY 1 cut(s) 695
OliI CACNNNNGTG 1 cut(s) 565
PagI TCATGA 1 cut(s) 948
PciI ACATGT 1 cut(s) 691
PciSI GCTCTTC 1 cut(s) 1374
PcsI WCGNNNNNNNCGW 2 cut(s) 108, 196
PctI GAATGC 1 cut(s) 1262
PdmI GAANNNNTTC 1 cut(s) 864
PfeI GAWTC 4 cut(s) 769, 898, 982, 1148
PflMI CCANNNNNTGG 1 cut(s) 533
PfoI TCCNGGA 1 cut(s) 204
PkrI GCNGC 5 cut(s) 36, 64, 89, 298, 343
PleI GAGTC 4 cut(s) 36, 428, 559, 565
PmaCI CACGTG 1 cut(s) 302
PmlI CACGTG 1 cut(s) 302
PpsI GAGTC 4 cut(s) 36, 428, 559, 565
Ppu21I YACGTR 1 cut(s) 302
PscI ACATGT 1 cut(s) 691
PsiI TTATAA 2 cut(s) 404, 420
Psp1406I AACGTT 1 cut(s) 998
Psp6I CCWGG 4 cut(s) 177, 204, 571, 1116
PspCI CACGTG 1 cut(s) 302
PspGI CCWGG 4 cut(s) 177, 204, 571, 1116
PspN4I GGNNCC 1 cut(s) 1183
PstNI CAGNNNCTG 1 cut(s) 533
PsuI RGATCY 3 cut(s) 1120, 1181, 1392
RsaI GTAC 4 cut(s) 674, 977, 1012, 1333
RsaNI GTAC 4 cut(s) 673, 976, 1011, 1332
RseI CAYNNNNRTG 1 cut(s) 565
SacII CCGCGG 1 cut(s) 35
SapI GCTCTTC 1 cut(s) 1374
SaqAI TTAA 6 cut(s) 114, 654, 705, 731, 995, 1438
SatI GCNGC 5 cut(s) 35, 63, 88, 297, 342
Sau3AI GATC 8 cut(s) 226, 649, 720, 1060, 1120, 1156, 1181, 1392
SchI GAGTC 4 cut(s) 37, 428, 560, 566
ScrFI CCNGG 5 cut(s) 179, 206, 573, 717, 1118
SduI GDGCHC 1 cut(s) 1312
SfaNI GCATC 3 cut(s) 163, 520, 1084
SfcI CTRYAG 1 cut(s) 777
Sfr303I CCGCGG 1 cut(s) 35
SgrBI CCGCGG 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 565
SmlI CTYRAG 1 cut(s) 764
SmoI CTYRAG 1 cut(s) 764
SpeI ACTAGT 1 cut(s) 1109
Sse9I AATT 9 cut(s) 279, 288, 469, 702, 732, 913, 944, 1323, 1435
SsiI CCGC 4 cut(s) 32, 34, 62, 87
SspI AATATT 1 cut(s) 196
SspMI CTAG 3 cut(s) 747, 1110, 1418
StyD4I CCNGG 5 cut(s) 177, 204, 571, 715, 1116
StyI CCWWGG 2 cut(s) 246, 1347
TaaI ACNGT 6 cut(s) 155, 448, 852, 1015, 1277, 1336
TaiI ACGT 2 cut(s) 304, 1001
TaqI TCGA 3 cut(s) 275, 588, 1033
TaqII GACCGA 1 cut(s) 1403
TasI AATT 9 cut(s) 279, 288, 469, 702, 732, 913, 944, 1323, 1435
TatI WGTACW 2 cut(s) 672, 1331
TauI GCSGC 3 cut(s) 37, 65, 90
TfiI GAWTC 4 cut(s) 769, 898, 982, 1148
Tru1I TTAA 6 cut(s) 114, 654, 705, 731, 995, 1438
Tru9I TTAA 6 cut(s) 114, 654, 705, 731, 995, 1438
TseFI GTSAC 6 cut(s) 149, 302, 558, 1045, 1112, 1271
TseI GCWGC 2 cut(s) 296, 341
Tsp45I GTSAC 6 cut(s) 149, 302, 558, 1045, 1112, 1271
TspDTI ATGAA 7 cut(s) 809, 832, 873, 937, 1269, 1392, 1412
Van91I CCANNNNNTGG 1 cut(s) 533
XapI RAATTY 1 cut(s) 944
XceI RCATGY 1 cut(s) 695
XcmI CCANNNNNNNNNTGG 1 cut(s) 1243
XmnI GAANNNNTTC 1 cut(s) 864
XspI CTAG 3 cut(s) 747, 1110, 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.