Rmu_sc0006761.1_g000012

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006761.1
OG0000065
Physical Location & Seq
Forward (+)
54714 .. 55337
624 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006761.1_g000012.1.cds

Sequence Viewer

Length: 624 bp
atgccctccgcccccagctacatgaggagcgatcaggaagccgcggtgtccgctccgcctagcgcggaggagcttcgtcacaagaagcgcatgaggcgccttctctacgtagctatcttcgccgtgttccaagtcgtagtgataacagtgtttgcactcaccgtgatgaaaatcaagagccccaaattccggatccggacggcgtcgatcactgactttgaagtcggcagcgccacgagtccgtcgtttgatttggaaatggacgttcattttggggtgaagaacaccaactttggtcacttcgagtatgaagatggaatcgttgtgttttcgtacggaggtgtgagaattggacaggccaatgtggaggaggcacgtgtcagggcaagatcgaccaggaaggtggacgtctcatcggtgaacttgacttcgaaaggtttgccggcaaactcaccgttggggagtgatattagtagggggattattccgattacgacgtcctcaaagttagatgggaagattcatctgatgaaggtgatcaagaagaagaagtctgctcagatgaattgcaccatggaagttgttcttgccacaaagtctgttcaaaatgtcgtatgcaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

207

Amino Acids

22.77

Weight (kDa)

9.89

Isoelectric Point (pI)

39.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000065)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64065
fragaria_vesca FvH4_1g02250 FvH4_4g18381 FvH4_5g03320 FvH4_5g03331 FvH4_5g03333 FvH4_5g03334 FvH4_5g03340 FvH4_5g03342 FvH4_5g03344 FvH4_5g03370 FvH4_5g03391 FvH4_5g03400 FvH4_5g03430 FvH4_5g03450 FvH4_7g30570
malus_domestica MD06G1091500.v1.1 MD06G1093100.v1.1 MD06G1093400.v1.1 MD06G1093600.v1.1 MD06G1093700.v1.1 MD06G1093800.v1.1 MD06G1094000.v1.1 MD06G1094100.v1.1 MD06G1094200.v1.1 MD06G1094300.v1.1 MD06G1094400.v1.1 MD06G1094500.v1.1 MD06G1094600.v1.1 MD07G1281600.v1.1 MD14G1113800.v1.1 MD14G1114100.v1.1 MD14G1114500.v1.1 MD14G1114600.v1.1 MD14G1114700.v1.1 MD14G1114800.v1.1 MD15G1164000.v1.1
prunus_persica Prupe.2G303300_v2.0.a1 Prupe.5G108800_v2.0.a1 Prupe.5G109700_v2.0.a1 Prupe.5G109800_v2.0.a1 Prupe.7G233300_v2.0.a1
pyrus_communis pycom01g22140 pycom02g01830 pycom03g14740 pycom06g08690 pycom06g08710 pycom06g08720 pycom06g08900 pycom06g08970 pycom06g09040 pycom06g09090 pycom06g09100 pycom06g09120 pycom06g09130 pycom06g09140
rosa_chinensis RchiOBHm_Chr1g0379411 RchiOBHm_Chr2g0087371 RchiOBHm_Chr5g0019191 RchiOBHm_Chr7g0196211 RchiOBHm_Chr7g0196241 RchiOBHm_Chr7g0196251 RchiOBHm_Chr7g0196271 RchiOBHm_Chr7g0196311 RchiOBHm_Chr7g0196321 RchiOBHm_Chr7g0196331 RchiOBHm_Chr7g0196341 RchiOBHm_Chr7g0196381 RchiOBHm_Chr7g0196391 RchiOBHm_Chr7g0196401 RchiOBHm_Chr7g0196411 RchiOBHm_Chr7g0196421 RchiOBHm_Chr7g0196431 RchiOBHm_Chr7g0196441 RchiOBHm_Chr7g0196461 RchiOBHm_Chr7g0209531 RchiOBHm_Chr7g0209541 RchiOBHm_Chr7g0209551 RchiOBHm_Chr7g0209571 RchiOBHm_Chr7g0209581 RchiOBHm_Chr7g0209591 RchiOBHm_Chr7g0211821 RchiOBHm_Chr7g0222831 RchiOBHm_Chr7g0222841 RchiOBHm_Chr7g0222851 RchiOBHm_Chr7g0222871 RchiOBHm_Chr7g0222881 RchiOBHm_Chr7g0222891 RchiOBHm_Chr7g0222901
rosa_laevigata RLG00000002015 RLG00000002016 RLG00000002017 RLG00000002018 RLG00000002019 RLG00000002020 RLG00000002021 RLG00000002023 RLG00000002024 RLG00000002963 RLG00000003114 RLG00000003115 RLG00000003117 RLG00000003119 RLG00000003121 RLG00000004013 RLG00000004015 RLG00000004016 RLG00000004017 RLG00000004018 RLG00000004019 RLG00000004020 RLG00000004021 RLG00000004022 RLG00000004023 RLG00000004024 RLG00000004025 RLG00000004026 RLG00000004027 RLG00000004029 RLG00000004030 RLG00000004032 RLG00000004033 RLG00000004034 RLG00000004035 RLG00000004037 RLG00000004038 RLG00000004043 RLG00000004044 RLG00000004046 RLG00000004047 RLG00000004048 RLG00000004050 RLG00000015860 RLG00000024213 RLG00000024219 RLG00000026400 RLG00000032427
rosa_multiflora Rmu_co8316975.1_g000001 Rmu_co8321397.1_g000001 Rmu_co8336999.1_g000001 Rmu_co8388981.1_g000001 Rmu_co8425655.1_g000002 Rmu_co8482553.1_g000001 Rmu_sc0000243.1_g000008 Rmu_sc0000243.1_g000011 Rmu_sc0000243.1_g000015 Rmu_sc0000243.1_g000019 Rmu_sc0000243.1_g000021 Rmu_sc0000243.1_g000022 Rmu_sc0000736.1_g000005 Rmu_sc0001867.1_g000001 Rmu_sc0001867.1_g000002 Rmu_sc0001867.1_g000004 Rmu_sc0001867.1_g000005 Rmu_sc0002142.1_g000002 Rmu_sc0005676.1_g000014 Rmu_sc0005993.1_g000004 Rmu_sc0005993.1_g000009 Rmu_sc0006064.1_g000004 Rmu_sc0006761.1_g000012 Rmu_sc0006761.1_g000015 Rmu_sc0007292.1_g000017 Rmu_sc0007292.1_g000022 Rmu_sc0007292.1_g000027 Rmu_sc0007292.1_g000030 Rmu_sc0008126.1_g000003 Rmu_sc0008126.1_g000004 Rmu_sc0008581.1_g000010 Rmu_sc0008581.1_g000011 Rmu_sc0008581.1_g000012 Rmu_sc0008828.1_g000008 Rmu_sc0008828.1_g000009 Rmu_sc0008884.1_g000001 Rmu_sc0008884.1_g000002 Rmu_sc0008884.1_g000007 Rmu_sc0008884.1_g000008 Rmu_sc0008884.1_g000009 Rmu_sc0009474.1_g000001 Rmu_sc0009738.1_g000002 Rmu_sc0009738.1_g000003 Rmu_sc0011534.1_g000002 Rmu_sc0011534.1_g000003 Rmu_sc0013801.1_g000001 Rmu_sc0013801.1_g000008 Rmu_sc0013801.1_g000014 Rmu_sc0013801.1_g000015 Rmu_sc0018549.1_g000001 Rmu_sc0022712.1_g000001 Rmu_sc0023035.1_g000001 Rmu_sc0030855.1_g000001 Rmu_sc0030855.1_g000002 Rmu_sc0033647.1_g000003 Rmu_sc0034421.1_g000001 Rmu_sc0038138.1_g000001
rosa_roxburghii Rroxscaffold_1G00058800 Rroxscaffold_1G00074140 Rroxscaffold_2G00153660 Rroxscaffold_3G00236440 Rroxscaffold_3G00236450 Rroxscaffold_3G00236460 Rroxscaffold_3G00236470 Rroxscaffold_3G00236480 Rroxscaffold_3G00247410 Rroxscaffold_3G00249230 Rroxscaffold_3G00249250 Rroxscaffold_3G00249260 Rroxscaffold_3G00249280 Rroxscaffold_3G00259300 Rroxscaffold_3G00259320 Rroxscaffold_3G00259330 Rroxscaffold_3G00259340 Rroxscaffold_3G00259360 Rroxscaffold_3G00259370 Rroxscaffold_3G00259380 Rroxscaffold_3G00259390 Rroxscaffold_3G00259400 Rroxscaffold_3G00259440 Rroxscaffold_3G00259450 Rroxscaffold_3G00259460 Rroxscaffold_3G00259470 Rroxscaffold_3G00259480 Rroxscaffold_3G00259500 Rroxscaffold_3G00259510 Rroxscaffold_3G00259530 Rroxscaffold_3G00259550 Rroxscaffold_3G00259560 Rroxscaffold_3G00259580 Rroxscaffold_3G00259590 Rroxscaffold_3G00259600 Rroxscaffold_3G00259630 Rroxscaffold_4G00280180
rosa_rugosa Rorug01G0411900 Rorug07G0032100 Rorug07G0032200 Rorug07G0032300 Rorug07G0032300 Rorug07G0032400 Rorug07G0032700 Rorug07G0032800 Rorug07G0032900 Rorug07G0033000 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033100 Rorug07G0033200 Rorug07G0033300 Rorug07G0033300 Rorug07G0033400 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0033500 Rorug07G0114200 Rorug07G0114400.1 Rorug07G0128900
rosa_samantha Rh1CG404900 Rh1DG423100 Rh2BG027600 Rh5BG138600 Rh7AG157700 Rh7AG261600 Rh7BG159300 Rh7BG159400 Rh7BG255200 Rh7CG163400 Rh7CG163500 Rh7CG163600 Rh7CG163800 Rh7CG164000 Rh7CG164100 Rh7CG164200 Rh7CG164400 Rh7CG164500 Rh7CG164600 Rh7CG164700 Rh7CG164800 Rh7CG164900 Rh7CG165000 Rh7CG165100 Rh7CG165200 Rh7CG165300 Rh7CG165400 Rh7CG165500 Rh7CG165600 Rh7CG165800 Rh7CG165900 Rh7CG166000 Rh7CG166200 Rh7CG263800 Rh7CG264000 Rh7CG264100 Rh7CG264200 Rh7CG264300 Rh7CG264400 Rh7CG278200 Rh7CG374700 Rh7CG374800 Rh7CG375000 Rh7CG375100 Rh7CG375200 Rh7CG375300 Rh7DG158700 Rh7DG158800 Rh7DG268200
rosa_wichuraiana Rw1G037980 Rw2G002230 Rw5G012400 Rw7G013490 Rw7G013500 Rw7G013600 Rw7G013610 Rw7G013640 Rw7G013650 Rw7G013660 Rw7G013670 Rw7G013690 Rw7G013700 Rw7G013710 Rw7G013730 Rw7G013740 Rw7G013750 Rw7G013760 Rw7G013770 Rw7G013780 Rw7G013800 Rw7G020960 Rw7G020970 Rw7G020990 Rw7G021000 Rw7G021010 Rw7G021020 Rw7G021030 Rw7G021040 Rw7G021050 Rw7G022310 Rw7G030300 Rw7G030310 Rw7G030320 Rw7G030330 Rw7G030340 Rw7G030350 Rw7G030360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 221
AatII GACGTC 2 cut(s) 411, 500
AccB1I GGYRCC 1 cut(s) 96
AccBSI CCGCTC 1 cut(s) 53
AccII CGCG 2 cut(s) 44, 65
AccIII TCCGGA 2 cut(s) 189, 195
AciI CCGC 6 cut(s) 9, 42, 44, 51, 56, 65
AclWI GGATC 2 cut(s) 187, 200
AcsI RAATTY 1 cut(s) 185
AcvI CACGTG 1 cut(s) 377
AcyI GRCGYC 4 cut(s) 97, 203, 408, 497
AfaI GTAC 1 cut(s) 335
AfiI CCNNNNNNNGG 1 cut(s) 189
AflIII ACRYGT 1 cut(s) 376
AgsI TTSAA 2 cut(s) 221, 605
AjnI CCWGG 1 cut(s) 395
AluBI AGCT 3 cut(s) 18, 73, 113
AluI AGCT 3 cut(s) 18, 73, 113
Alw26I GTCTC 1 cut(s) 415
AlwI GGATC 2 cut(s) 187, 200
Aor13HI TCCGGA 2 cut(s) 189, 195
AoxI GGCC 1 cut(s) 357
ApeKI GCWGC 1 cut(s) 228
ApoI RAATTY 1 cut(s) 185
ArsI GACNNNNNNTTYG 2 cut(s) 254, 286
Asp700I GAANNNNTTC 1 cut(s) 582
AspLEI GCGC 4 cut(s) 65, 90, 99, 233
AsuHPI GGTGA 5 cut(s) 151, 289, 430, 444, 547
AsuII TTCGAA 1 cut(s) 431
BamHI GGATCC 1 cut(s) 192
BanI GGYRCC 1 cut(s) 96
BanII GRGCYC 1 cut(s) 182
BauI CACGAG 1 cut(s) 235
BbrPI CACGTG 1 cut(s) 377
BbvI GCAGC 1 cut(s) 240
BccI CCATC 2 cut(s) 308, 506
BceAI ACGGC 2 cut(s) 107, 216
BcgI CGANNNNNNTGC 2 cut(s) 421, 455
BciT130I CCWGG 1 cut(s) 397
BclI TGATCA 1 cut(s) 537
BcoDI GTCTC 1 cut(s) 415
BfaI CTAG 1 cut(s) 60
BfoI RGCGCY 2 cut(s) 100, 234
BisI GCNGC 2 cut(s) 42, 229
BlsI GCNGC 2 cut(s) 43, 230
Bme1390I CCNGG 1 cut(s) 397
BmiI GGNNCC 2 cut(s) 98, 194
BmrFI CCNGG 1 cut(s) 397
Bpu14I TTCGAA 1 cut(s) 431
BsaAI YACGTR 2 cut(s) 109, 377
BsaBI GATNNNNATC 1 cut(s) 170
BsaHI GRCGYC 4 cut(s) 97, 203, 408, 497
BsaJI CCNNGG 2 cut(s) 42, 573
BsaWI WCCGGW 2 cut(s) 189, 195
Bsc4I CCNNNNNNNGG 1 cut(s) 189
Bse118I RCCGGY 1 cut(s) 442
Bse8I GATNNNNATC 1 cut(s) 170
BseAI TCCGGA 2 cut(s) 189, 195
BseBI CCWGG 1 cut(s) 397
BseDI CCNNGG 2 cut(s) 42, 573
BseJI GATNNNNATC 1 cut(s) 170
BseLI CCNNNNNNNGG 1 cut(s) 189
BseMII CTCAG 1 cut(s) 572
BseRI GAGGAG 3 cut(s) 40, 83, 383
BseXI GCAGC 1 cut(s) 240
BseYI CCCAGC 1 cut(s) 14
Bsh1236I CGCG 2 cut(s) 44, 65
BshFI GGCC 1 cut(s) 359
BshNI GGYRCC 1 cut(s) 96
BsiSI CCGG 3 cut(s) 190, 196, 443
BsiWI CGTACG 1 cut(s) 333
BslI CCNNNNNNNGG 1 cut(s) 189
BsmAI GTCTC 1 cut(s) 415
BsmBI CGTCTC 1 cut(s) 415
BsnI GGCC 1 cut(s) 359
Bsp119I TTCGAA 1 cut(s) 431
Bsp1286I GDGCHC 1 cut(s) 182
Bsp13I TCCGGA 2 cut(s) 189, 195
Bsp143I GATC 5 cut(s) 31, 192, 207, 389, 537
Bsp19I CCATGG 1 cut(s) 573
BspACI CCGC 6 cut(s) 9, 42, 44, 51, 56, 65
BspANI GGCC 1 cut(s) 359
BspCNI CTCAG 1 cut(s) 571
BspEI TCCGGA 2 cut(s) 189, 195
BspFNI CGCG 2 cut(s) 44, 65
BspLI GGNNCC 2 cut(s) 98, 194
BspPI GGATC 2 cut(s) 187, 200
BspT104I TTCGAA 1 cut(s) 431
BspT107I GGYRCC 1 cut(s) 96
BsrBI CCGCTC 1 cut(s) 53
BsrFI RCCGGY 1 cut(s) 442
BssAI RCCGGY 1 cut(s) 442
BssECI CCNNGG 2 cut(s) 42, 573
BssMI GATC 5 cut(s) 31, 192, 207, 389, 537
BssNI GRCGYC 4 cut(s) 97, 203, 408, 497
BssSI CACGAG 1 cut(s) 235
BssT1I CCWWGG 1 cut(s) 573
Bst2BI CACGAG 1 cut(s) 235
Bst2UI CCWGG 1 cut(s) 397
Bst4CI ACNGT 3 cut(s) 148, 163, 456
BstACI GRCGYC 4 cut(s) 97, 203, 408, 497
BstBAI YACGTR 2 cut(s) 109, 377
BstBI TTCGAA 1 cut(s) 431
BstC8I GCNNGC 1 cut(s) 444
BstDEI CTNAG 1 cut(s) 558
BstDSI CCRYGG 2 cut(s) 42, 573
BstFNI CGCG 2 cut(s) 44, 65
BstH2I RGCGCY 2 cut(s) 100, 234
BstHHI GCGC 4 cut(s) 65, 90, 99, 233
BstKTI GATC 5 cut(s) 34, 195, 210, 392, 540
BstMAI GTCTC 1 cut(s) 415
BstMBI GATC 5 cut(s) 31, 192, 207, 389, 537
BstMWI GCNNNNNNNGC 4 cut(s) 50, 94, 96, 119
BstNI CCWGG 1 cut(s) 397
BstSCI CCNGG 1 cut(s) 395
BstSNI TACGTA 1 cut(s) 109
BstUI CGCG 2 cut(s) 44, 65
BstV1I GCAGC 1 cut(s) 240
BstX2I RGATCY 1 cut(s) 192
BstXI CCANNNNNNTGG 1 cut(s) 403
BstYI RGATCY 1 cut(s) 192
BsuRI GGCC 1 cut(s) 359
BtgI CCRYGG 2 cut(s) 42, 573
BtsIMutI CAGTG 2 cut(s) 153, 210
Cac8I GCNNGC 1 cut(s) 444
CfoI GCGC 4 cut(s) 65, 90, 99, 233
Cfr10I RCCGGY 1 cut(s) 442
Cfr42I CCGCGG 1 cut(s) 45
CseI GACGC 1 cut(s) 192
Csp6I GTAC 1 cut(s) 334
CviAII CATG 3 cut(s) 22, 91, 574
CviJI RGCY 6 cut(s) 18, 41, 73, 113, 180, 359
CviKI_1 RGCY 6 cut(s) 18, 41, 73, 113, 180, 359
CviQI GTAC 1 cut(s) 334
DdeI CTNAG 1 cut(s) 558
DinI GGCGCC 1 cut(s) 98
DpnI GATC 5 cut(s) 33, 194, 209, 391, 539
DpnII GATC 5 cut(s) 31, 192, 207, 389, 537
DrdI GACNNNNNNGTC 1 cut(s) 221
DseDI GACNNNNNNGTC 1 cut(s) 221
EciI GGCGGA 1 cut(s) 45
Eco105I TACGTA 1 cut(s) 109
Eco130I CCWWGG 1 cut(s) 573
Eco24I GRGCYC 1 cut(s) 182
Eco72I CACGTG 1 cut(s) 377
EcoRII CCWGG 1 cut(s) 395
EcoT14I CCWWGG 1 cut(s) 573
EcoT38I GRGCYC 1 cut(s) 182
EgeI GGCGCC 1 cut(s) 98
EheI GGCGCC 1 cut(s) 98
ErhI CCWWGG 1 cut(s) 573
Esp3I CGTCTC 1 cut(s) 415
FaeI CATG 3 cut(s) 25, 94, 577
FaiI YATR 5 cut(s) 23, 92, 309, 575, 616
FalI AAGNNNNNCTT 2 cut(s) 570, 602
FatI CATG 3 cut(s) 21, 90, 573
FbaI TGATCA 1 cut(s) 537
Fnu4HI GCNGC 2 cut(s) 42, 229
FriOI GRGCYC 1 cut(s) 182
Fsp4HI GCNGC 2 cut(s) 42, 229
FspBI CTAG 1 cut(s) 60
GlaI GCGC 4 cut(s) 64, 89, 98, 232
GluI GCNGC 2 cut(s) 42, 229
GsaI CCCAGC 1 cut(s) 18
HaeII RGCGCY 2 cut(s) 100, 234
HaeIII GGCC 1 cut(s) 359
HapII CCGG 3 cut(s) 190, 196, 443
HgaI GACGC 1 cut(s) 192
HhaI GCGC 4 cut(s) 65, 90, 99, 233
Hin1I GRCGYC 4 cut(s) 97, 203, 408, 497
Hin1II CATG 3 cut(s) 25, 94, 577
Hin6I GCGC 4 cut(s) 63, 88, 97, 231
HinP1I GCGC 4 cut(s) 63, 88, 97, 231
HinfI GANTC 3 cut(s) 238, 318, 520
HpaII CCGG 3 cut(s) 190, 196, 443
HphI GGTGA 5 cut(s) 151, 289, 430, 444, 547
Hpy166II GTNNAC 2 cut(s) 406, 421
Hpy188I TCNGA 3 cut(s) 489, 528, 561
Hpy188III TCNNGA 5 cut(s) 35, 175, 190, 196, 541
Hpy8I GTNNAC 2 cut(s) 406, 421
Hpy99I CGWCG 3 cut(s) 208, 247, 499
HpyAV CCTTC 3 cut(s) 110, 394, 526
HpyCH4III ACNGT 3 cut(s) 148, 163, 456
HpyCH4IV ACGT 5 cut(s) 108, 264, 376, 408, 497
HpyCH4V TGCA 3 cut(s) 155, 570, 618
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 94, 96, 119
HpyF3I CTNAG 1 cut(s) 558
HpySE526I ACGT 5 cut(s) 108, 264, 376, 408, 497
Hsp92I GRCGYC 4 cut(s) 97, 203, 408, 497
Hsp92II CATG 3 cut(s) 25, 94, 577
HspAI GCGC 4 cut(s) 63, 88, 97, 231
KasI GGCGCC 1 cut(s) 96
Kpn2I TCCGGA 2 cut(s) 189, 195
KroI GCCGGC 1 cut(s) 442
KroNI GCCGGC 1 cut(s) 444
Ksp22I TGATCA 1 cut(s) 537
KspI CCGCGG 1 cut(s) 45
Kzo9I GATC 5 cut(s) 31, 192, 207, 389, 537
LmnI GCTCC 3 cut(s) 27, 58, 70
LpnPI CCDG 9 cut(s) 20, 28, 203, 209, 341, 367, 382, 409, 456
Lsp1109I GCAGC 1 cut(s) 240
MaeI CTAG 1 cut(s) 60
MaeII ACGT 5 cut(s) 108, 264, 376, 408, 497
MaeIII GTNAC 2 cut(s) 77, 296
MalI GATC 5 cut(s) 33, 194, 209, 391, 539
MbiI CCGCTC 1 cut(s) 53
MboI GATC 5 cut(s) 31, 192, 207, 389, 537
MboII GAAGA 6 cut(s) 109, 292, 323, 529, 556, 559
MflI RGATCY 1 cut(s) 192
MhlI GDGCHC 1 cut(s) 182
MluCI AATT 3 cut(s) 185, 348, 565
Mly113I GGCGCC 1 cut(s) 97
MlyI GAGTC 1 cut(s) 247
MnlI CCTC 8 cut(s) 16, 18, 61, 87, 332, 361, 364, 511
MroI TCCGGA 2 cut(s) 189, 195
MroNI GCCGGC 1 cut(s) 442
MroXI GAANNNNTTC 1 cut(s) 582
MslI CAYNNNNRTG 1 cut(s) 164
MspA1I CMGCKG 1 cut(s) 44
MspI CCGG 3 cut(s) 190, 196, 443
MspR9I CCNGG 1 cut(s) 397
MvaI CCWGG 1 cut(s) 397
MvnI CGCG 2 cut(s) 44, 65
MwoI GCNNNNNNNGC 4 cut(s) 50, 94, 96, 119
NaeI GCCGGC 1 cut(s) 444
NarI GGCGCC 1 cut(s) 97
NcoI CCATGG 1 cut(s) 573
NdeII GATC 5 cut(s) 31, 192, 207, 389, 537
NgoMIV GCCGGC 1 cut(s) 442
NlaIII CATG 3 cut(s) 25, 94, 577
NlaIV GGNNCC 2 cut(s) 98, 194
NmuCI GTSAC 2 cut(s) 77, 296
NspV TTCGAA 1 cut(s) 431
PcsI WCGNNNNNNNCGW 1 cut(s) 242
PdiI GCCGGC 1 cut(s) 444
PdmI GAANNNNTTC 1 cut(s) 582
PfeI GAWTC 2 cut(s) 318, 520
Pfl23II CGTACG 1 cut(s) 333
PflFI GACNNNGTC 1 cut(s) 202
PkrI GCNGC 2 cut(s) 43, 230
PleI GAGTC 1 cut(s) 246
PluTI GGCGCC 1 cut(s) 100
PmaCI CACGTG 1 cut(s) 377
PmlI CACGTG 1 cut(s) 377
PpsI GAGTC 1 cut(s) 246
Ppu21I YACGTR 2 cut(s) 109, 377
Psp6I CCWGG 1 cut(s) 395
PspCI CACGTG 1 cut(s) 377
PspFI CCCAGC 1 cut(s) 14
PspGI CCWGG 1 cut(s) 395
PspLI CGTACG 1 cut(s) 333
PspN4I GGNNCC 2 cut(s) 98, 194
PsuI RGATCY 1 cut(s) 192
PsyI GACNNNGTC 1 cut(s) 202
RsaI GTAC 1 cut(s) 335
RsaNI GTAC 1 cut(s) 334
RseI CAYNNNNRTG 1 cut(s) 164
SacII CCGCGG 1 cut(s) 45
SatI GCNGC 2 cut(s) 42, 229
Sau3AI GATC 5 cut(s) 31, 192, 207, 389, 537
SchI GAGTC 1 cut(s) 247
ScrFI CCNGG 1 cut(s) 397
SduI GDGCHC 1 cut(s) 182
SfoI GGCGCC 1 cut(s) 98
Sfr303I CCGCGG 1 cut(s) 45
SfuI TTCGAA 1 cut(s) 431
SgrBI CCGCGG 1 cut(s) 45
SmiMI CAYNNNNRTG 1 cut(s) 164
SnaBI TACGTA 1 cut(s) 109
Sse9I AATT 3 cut(s) 185, 348, 565
SsiI CCGC 6 cut(s) 9, 42, 44, 51, 56, 65
SspDI GGCGCC 1 cut(s) 96
SspMI CTAG 1 cut(s) 60
StyD4I CCNGG 1 cut(s) 395
StyI CCWWGG 1 cut(s) 573
TaaI ACNGT 3 cut(s) 148, 163, 456
TaiI ACGT 5 cut(s) 111, 267, 379, 411, 500
TaqI TCGA 4 cut(s) 206, 303, 392, 431
TasI AATT 3 cut(s) 185, 348, 565
TauI GCSGC 1 cut(s) 44
TfiI GAWTC 2 cut(s) 318, 520
TscAI CASTG 2 cut(s) 153, 217
TseFI GTSAC 2 cut(s) 77, 296
TseI GCWGC 1 cut(s) 228
Tsp45I GTSAC 2 cut(s) 77, 296
TspDTI ATGAA 6 cut(s) 182, 257, 324, 512, 545, 578
TspGWI ACGGA 2 cut(s) 231, 351
TspRI CASTG 2 cut(s) 153, 217
Tth111I GACNNNGTC 1 cut(s) 202
XapI RAATTY 1 cut(s) 185
XmnI GAANNNNTTC 1 cut(s) 582
XspI CTAG 1 cut(s) 60
ZraI GACGTC 2 cut(s) 409, 498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.