FvH4_5g09210

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
5312968 .. 5315858
2891 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g09210.t4

Sequence Viewer

Length: 1401 bp
ATGAAGGCAATGGCAATGGCAATGGCTCTACTGCTTGTGCTTCAGCTGTGCTTCATTGCCATGGAGGTTGTTGAGTCCTCATCTCATCACCATGATCACAAGATAGTTAGACTTCCAGGACAACCCAATGTGGGCTTTCAACACTTTTCTGGTTATATTTCTGTGGGCGATCATCAGAAAAACCACAAAGCTCTATTTTACTACTTTGTTGAAGCAGAGATAAACCCAGCTTCAAAGCCTTTGGTCCTCTGGTTAAATGGAGGTCCTGGTTGTTCTTCTCTTGGGGTAGGGGCCTTCTCTGAAAATGGACCTTTTAGACCAGATGGTCAAGTCCTAGTTAGAAATGAGTACAGCTGGAATAGAGAGGCTAATATGTTGTATTTAGAGACACCAATTGGTGTGGGATTCTCTAATTCCAGACATAGCTCCAACTATGTGGCAGTAGATGATAAAGCAACAGCCAGGGACAATCTTGTATTCTTACAACGCTGGTTCAACAAGTTCCCTCAATATAAGCACAGAGATTTGTTTCTAACTGGAGAAAGTTATGCAGGTCACTACATCCCTCAACTTGCAAAGCTTATGGTTGAAGCTAACCGCAAAGAGAAGTTGTTCAATCTAAAAGGACTAGCTTTGGGTAACCCTGTGCTAGAATACGCCACTGACTTTAATTCAAGGGCTGAGTATTTCTGGTCTCATGGACTAATATCAGACTCAACATACAGAATGTTCACTTCTGTTTGCAACTATTCTCGCTACGTGAGCGAGTACTATAGAGACTCGGTTTCACCTGTTTGTTCAAGAGTTATGAGCCTAGTGAGCAGAGAAACCAGTAAATTTGTGGACAAGTATGATGTCACTCTTGATGTCTGCATTTCATCTGTGCTCTCTCAGTCAAAGGCTATAAGCCCCAATCAAATGACAGAGCGGATTGATGTGTGTGTAGAAGACAAGATCGTGAACTACTTGAACCGAAAAGATGTGCAGAATGCTCTCCATGCTAAGCTTGTCGGAGTTCGAAGATGGGATGTTTGCAGCAACATTTTGGACTACCAAATGCTCGACCTGGAAATCCCTACAATCTCACTAGTTGGATCGATTGTCAAAGCTGGAATTCCAGTTTTAGTCTATAGTGGAGATCAGGATTCTGTAATTCCATTGACCGGAAGCCGAACCTTGGTCGACAGATTGGCAAGGGAGTTGGGACTGAACACCACTGTCCCTTATAGAGTTTGGTTTCAGGGAAAGCAGGTTGGTGGGTGGACTCAAGTCTATGGGAACATACTTTCATTTGCTACCATCAGAGGTGCCTCTCATGAAGCACCATTCTCACAGCCTGAGAGATCACTCGTGCTATTCAAGTCATTTCTTCAAGGCAGGCCTCTACCTCAAGTATTCTGA

Protein Analysis

467

Amino Acids

52.56

Weight (kDa)

8.51

Isoelectric Point (pI)

37.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 39 - 378 1.1e-100 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 324
Acc36I ACCTGC 2 cut(s) 542, 1240
AccB1I GGYRCC 1 cut(s) 1307
AccBSI CCGCTC 1 cut(s) 928
AccI GTMKAC 1 cut(s) 1182
AciI CCGC 2 cut(s) 598, 928
AclWI GGATC 1 cut(s) 1102
AcsI RAATTY 2 cut(s) 836, 1113
AcuI CTGAAG 1 cut(s) 26
AfaI GTAC 2 cut(s) 350, 770
AfiI CCNNNNNNNGG 3 cut(s) 131, 1163, 1177
AhlI ACTAGT 1 cut(s) 1087
AjnI CCWGG 4 cut(s) 115, 265, 461, 1065
Alw21I GWGCWC 1 cut(s) 888
Alw26I GTCTC 3 cut(s) 380, 699, 771
AlwI GGATC 1 cut(s) 1102
AoxI GGCC 2 cut(s) 291, 1379
ApeKI GCWGC 1 cut(s) 1035
ApoI RAATTY 2 cut(s) 836, 1113
Asp700I GAANNNNTTC 1 cut(s) 611
AspS9I GGNCC 4 cut(s) 244, 263, 291, 308
AsuHPI GGTGA 2 cut(s) 80, 780
AsuII TTCGAA 1 cut(s) 1018
AvaII GGWCC 3 cut(s) 244, 263, 308
BanI GGYRCC 1 cut(s) 1307
BauI CACGAG 1 cut(s) 1349
BbsI GAAGAC 1 cut(s) 954
Bbv12I GWGCWC 1 cut(s) 888
BbvI GCAGC 1 cut(s) 1047
BccI CCATC 3 cut(s) 317, 1017, 1307
BciT130I CCWGG 4 cut(s) 117, 267, 463, 1067
BclI TGATCA 1 cut(s) 94
BcoDI GTCTC 3 cut(s) 380, 699, 771
BcuI ACTAGT 1 cut(s) 1087
BfaI CTAG 5 cut(s) 335, 629, 650, 815, 1088
BfmI CTRYAG 2 cut(s) 772, 1129
BfuAI ACCTGC 2 cut(s) 542, 1240
BisI GCNGC 1 cut(s) 1036
BlpI GCTNAGC 1 cut(s) 1002
BlsI GCNGC 1 cut(s) 1037
BmcAI AGTACT 1 cut(s) 770
Bme1390I CCNGG 4 cut(s) 117, 267, 463, 1067
Bme18I GGWCC 3 cut(s) 244, 263, 308
BmgT120I GGNCC 4 cut(s) 244, 263, 291, 308
BmiI GGNNCC 2 cut(s) 292, 1309
BmrFI CCNGG 4 cut(s) 117, 267, 463, 1067
BoxI GACNNNNGTC 1 cut(s) 1268
BpiI GAAGAC 1 cut(s) 954
BpmI CTGGAG 1 cut(s) 558
Bpu1102I GCTNAGC 1 cut(s) 1002
Bpu14I TTCGAA 1 cut(s) 1018
BpuEI CTTGAG 2 cut(s) 1251, 1374
Bsa29I ATCGAT 1 cut(s) 1097
BsaAI YACGTR 1 cut(s) 760
BsaI GGTCTC 1 cut(s) 699
BsaJI CCNNGG 3 cut(s) 60, 462, 1176
BsaWI WCCGGW 1 cut(s) 1163
Bsc4I CCNNNNNNNGG 3 cut(s) 131, 1163, 1177
Bse1I ACTGG 3 cut(s) 541, 831, 1118
Bse3DI GCAATG 4 cut(s) 15, 21, 27, 54
BseBI CCWGG 4 cut(s) 117, 267, 463, 1067
BseCI ATCGAT 1 cut(s) 1097
BseDI CCNNGG 3 cut(s) 60, 462, 1176
BseGI GGATG 2 cut(s) 561, 1033
BseLI CCNNNNNNNGG 3 cut(s) 131, 1163, 1177
BseMI GCAATG 4 cut(s) 15, 21, 27, 54
BseMII CTCAG 3 cut(s) 672, 905, 1329
BseNI ACTGG 3 cut(s) 541, 831, 1118
BseXI GCAGC 1 cut(s) 1047
BseYI CCCAGC 1 cut(s) 226
BsgI GTGCAG 1 cut(s) 1004
BshFI GGCC 2 cut(s) 293, 1381
BshNI GGYRCC 1 cut(s) 1307
BshVI ATCGAT 1 cut(s) 1097
BsiHKAI GWGCWC 1 cut(s) 888
BsiSI CCGG 1 cut(s) 1164
BslFI GGGAC 3 cut(s) 479, 1205, 1218
BslI CCNNNNNNNGG 3 cut(s) 131, 1163, 1177
BsmAI GTCTC 3 cut(s) 380, 699, 771
BsmFI GGGAC 3 cut(s) 479, 1205, 1218
BsmI GAATGC 1 cut(s) 994
BsnI GGCC 2 cut(s) 293, 1381
Bso31I GGTCTC 1 cut(s) 699
Bsp119I TTCGAA 1 cut(s) 1018
Bsp1286I GDGCHC 1 cut(s) 888
Bsp143I GATC 6 cut(s) 94, 169, 954, 1094, 1138, 1343
Bsp1720I GCTNAGC 1 cut(s) 1002
Bsp19I CCATGG 1 cut(s) 60
BspACI CCGC 2 cut(s) 598, 928
BspANI GGCC 2 cut(s) 293, 1381
BspCNI CTCAG 3 cut(s) 673, 904, 1330
BspDI ATCGAT 1 cut(s) 1097
BspHI TCATGA 1 cut(s) 1315
BspLI GGNNCC 2 cut(s) 292, 1309
BspMI ACCTGC 2 cut(s) 542, 1240
BspPI GGATC 1 cut(s) 1102
BspT104I TTCGAA 1 cut(s) 1018
BspT107I GGYRCC 1 cut(s) 1307
BspTNI GGTCTC 1 cut(s) 699
BsrBI CCGCTC 1 cut(s) 928
BsrDI GCAATG 4 cut(s) 15, 21, 27, 54
BsrI ACTGG 3 cut(s) 541, 831, 1118
BssECI CCNNGG 3 cut(s) 60, 462, 1176
BssMI GATC 6 cut(s) 94, 169, 954, 1094, 1138, 1343
BssSI CACGAG 1 cut(s) 1349
BssT1I CCWWGG 2 cut(s) 60, 1176
Bst2BI CACGAG 1 cut(s) 1349
Bst2UI CCWGG 4 cut(s) 117, 267, 463, 1067
Bst4CI ACNGT 1 cut(s) 1219
BstBAI YACGTR 1 cut(s) 760
BstBI TTCGAA 1 cut(s) 1018
BstC8I GCNNGC 1 cut(s) 1379
BstDEI CTNAG 4 cut(s) 681, 891, 1002, 1338
BstDSI CCRYGG 1 cut(s) 60
BstEII GGTNACC 1 cut(s) 638
BstF5I GGATG 2 cut(s) 561, 1033
BstKTI GATC 6 cut(s) 97, 172, 957, 1097, 1141, 1346
BstMAI GTCTC 3 cut(s) 380, 699, 771
BstMBI GATC 6 cut(s) 94, 169, 954, 1094, 1138, 1343
BstMWI GCNNNNNNNGC 3 cut(s) 762, 819, 998
BstNI CCWGG 4 cut(s) 117, 267, 463, 1067
BstPAI GACNNNNGTC 1 cut(s) 1268
BstPI GGTNACC 1 cut(s) 638
BstSCI CCNGG 4 cut(s) 115, 265, 461, 1065
BstSFI CTRYAG 2 cut(s) 772, 1129
BstV1I GCAGC 1 cut(s) 1047
BstV2I GAAGAC 1 cut(s) 954
BstXI CCANNNNNNTGG 1 cut(s) 436
Bsu15I ATCGAT 1 cut(s) 1097
BsuRI GGCC 2 cut(s) 293, 1381
BsuTUI ATCGAT 1 cut(s) 1097
BtgI CCRYGG 1 cut(s) 60
BtsCI GGATG 2 cut(s) 561, 1033
BtsIMutI CAGTG 2 cut(s) 660, 1215
BveI ACCTGC 2 cut(s) 542, 1240
Cac8I GCNNGC 1 cut(s) 1379
CciI TCATGA 1 cut(s) 1315
Cfr13I GGNCC 4 cut(s) 244, 263, 291, 308
ClaI ATCGAT 1 cut(s) 1097
Csp6I GTAC 2 cut(s) 349, 769
CspCI CAANNNNNGTGG 2 cut(s) 381, 416
CviAII CATG 5 cut(s) 61, 92, 698, 998, 1316
CviQI GTAC 2 cut(s) 349, 769
DdeI CTNAG 4 cut(s) 681, 891, 1002, 1338
DpnI GATC 6 cut(s) 96, 171, 956, 1096, 1140, 1345
DpnII GATC 6 cut(s) 94, 169, 954, 1094, 1138, 1343
DrdI GACNNNNNNGTC 1 cut(s) 324
DseDI GACNNNNNNGTC 1 cut(s) 324
Eco130I CCWWGG 2 cut(s) 60, 1176
Eco147I AGGCCT 1 cut(s) 1381
Eco31I GGTCTC 1 cut(s) 699
Eco47I GGWCC 3 cut(s) 244, 263, 308
Eco57I CTGAAG 1 cut(s) 26
Eco91I GGTNACC 1 cut(s) 638
EcoO109I RGGNCCY 2 cut(s) 263, 291
EcoO65I GGTNACC 1 cut(s) 638
EcoRI GAATTC 1 cut(s) 1113
EcoRII CCWGG 4 cut(s) 115, 265, 461, 1065
EcoT14I CCWWGG 2 cut(s) 60, 1176
ErhI CCWWGG 2 cut(s) 60, 1176
FaeI CATG 5 cut(s) 64, 95, 701, 1001, 1319
FaqI GGGAC 3 cut(s) 479, 1205, 1218
FatI CATG 5 cut(s) 60, 91, 697, 997, 1315
FbaI TGATCA 1 cut(s) 94
FblI GTMKAC 1 cut(s) 1182
Fnu4HI GCNGC 1 cut(s) 1036
FokI GGATG 2 cut(s) 548, 1040
Fsp4HI GCNGC 1 cut(s) 1036
FspBI CTAG 5 cut(s) 335, 629, 650, 815, 1088
GluI GCNGC 1 cut(s) 1036
GsaI CCCAGC 1 cut(s) 230
GsuI CTGGAG 1 cut(s) 558
HaeIII GGCC 2 cut(s) 293, 1381
HapII CCGG 1 cut(s) 1164
Hin1II CATG 5 cut(s) 64, 95, 701, 1001, 1319
HincII GTYRAC 1 cut(s) 1183
HindII GTYRAC 1 cut(s) 1183
HindIII AAGCTT 2 cut(s) 578, 1004
HinfI GANTC 6 cut(s) 74, 405, 713, 779, 1145, 1264
HpaII CCGG 1 cut(s) 1164
HphI GGTGA 2 cut(s) 80, 780
Hpy166II GTNNAC 5 cut(s) 732, 844, 961, 1183, 1263
Hpy188I TCNGA 6 cut(s) 177, 301, 712, 1013, 1304, 1400
Hpy188III TCNNGA 6 cut(s) 417, 801, 863, 958, 1142, 1316
Hpy8I GTNNAC 5 cut(s) 732, 844, 961, 1183, 1263
HpyAV CCTTC 1 cut(s) 304
HpyCH4III ACNGT 1 cut(s) 1219
HpyCH4IV ACGT 1 cut(s) 759
HpyCH4V TGCA 6 cut(s) 551, 575, 744, 873, 985, 1035
HpyF10VI GCNNNNNNNGC 3 cut(s) 762, 819, 998
HpyF3I CTNAG 4 cut(s) 681, 891, 1002, 1338
HpySE526I ACGT 1 cut(s) 759
Hsp92II CATG 5 cut(s) 64, 95, 701, 1001, 1319
Ksp22I TGATCA 1 cut(s) 94
Kzo9I GATC 6 cut(s) 94, 169, 954, 1094, 1138, 1343
LmnI GCTCC 1 cut(s) 431
Lsp1109I GCAGC 1 cut(s) 1047
MaeI CTAG 5 cut(s) 335, 629, 650, 815, 1088
MaeII ACGT 1 cut(s) 759
MaeIII GTNAC 3 cut(s) 554, 638, 856
MalI GATC 6 cut(s) 96, 171, 956, 1096, 1140, 1345
MbiI CCGCTC 1 cut(s) 928
MboI GATC 6 cut(s) 94, 169, 954, 1094, 1138, 1343
MboII GAAGA 4 cut(s) 267, 959, 1032, 1361
MfeI CAATTG 1 cut(s) 393
MhlI GDGCHC 1 cut(s) 888
MluCI AATT 6 cut(s) 393, 412, 670, 836, 1113, 1152
MlyI GAGTC 4 cut(s) 83, 707, 773, 1258
MmeI TCCRAC 3 cut(s) 453, 991, 1072
MroXI GAANNNNTTC 1 cut(s) 611
MseI TTAA 2 cut(s) 254, 669
MslI CAYNNNNRTG 2 cut(s) 59, 90
MspA1I CMGCKG 2 cut(s) 46, 354
MspI CCGG 1 cut(s) 1164
MspR9I CCNGG 4 cut(s) 117, 267, 463, 1067
MunI CAATTG 1 cut(s) 393
Mva1269I GAATGC 1 cut(s) 994
MvaI CCWGG 4 cut(s) 117, 267, 463, 1067
MwoI GCNNNNNNNGC 3 cut(s) 762, 819, 998
NcoI CCATGG 1 cut(s) 60
NdeII GATC 6 cut(s) 94, 169, 954, 1094, 1138, 1343
NlaIII CATG 5 cut(s) 64, 95, 701, 1001, 1319
NlaIV GGNNCC 2 cut(s) 292, 1309
NmuCI GTSAC 2 cut(s) 554, 856
NspV TTCGAA 1 cut(s) 1018
PagI TCATGA 1 cut(s) 1315
PceI AGGCCT 1 cut(s) 1381
PctI GAATGC 1 cut(s) 994
PdmI GAANNNNTTC 1 cut(s) 611
PfeI GAWTC 2 cut(s) 405, 1145
PfoI TCCNGGA 1 cut(s) 115
PkrI GCNGC 1 cut(s) 1037
PleI GAGTC 4 cut(s) 82, 707, 773, 1258
PpsI GAGTC 4 cut(s) 82, 707, 773, 1258
Ppu21I YACGTR 1 cut(s) 760
PpuMI RGGWCCY 1 cut(s) 263
PshAI GACNNNNGTC 1 cut(s) 1268
Psp5II RGGWCCY 1 cut(s) 263
Psp6I CCWGG 4 cut(s) 115, 265, 461, 1065
PspEI GGTNACC 1 cut(s) 638
PspFI CCCAGC 1 cut(s) 226
PspGI CCWGG 4 cut(s) 115, 265, 461, 1065
PspN4I GGNNCC 2 cut(s) 292, 1309
PspPI GGNCC 4 cut(s) 244, 263, 291, 308
PspPPI RGGWCCY 1 cut(s) 263
PvuII CAGCTG 2 cut(s) 46, 354
RsaI GTAC 2 cut(s) 350, 770
RsaNI GTAC 2 cut(s) 349, 769
RseI CAYNNNNRTG 2 cut(s) 59, 90
SalI GTCGAC 1 cut(s) 1181
SaqAI TTAA 2 cut(s) 254, 669
SatI GCNGC 1 cut(s) 1036
Sau3AI GATC 6 cut(s) 94, 169, 954, 1094, 1138, 1343
Sau96I GGNCC 4 cut(s) 244, 263, 291, 308
ScaI AGTACT 1 cut(s) 770
SchI GAGTC 4 cut(s) 83, 707, 773, 1258
ScrFI CCNGG 4 cut(s) 117, 267, 463, 1067
SduI GDGCHC 1 cut(s) 888
SfcI CTRYAG 2 cut(s) 772, 1129
SfuI TTCGAA 1 cut(s) 1018
SinI GGWCC 3 cut(s) 244, 263, 308
SmiMI CAYNNNNRTG 2 cut(s) 59, 90
SmlI CTYRAG 2 cut(s) 1266, 1389
SmoI CTYRAG 2 cut(s) 1266, 1389
SpeI ACTAGT 1 cut(s) 1087
Sse9I AATT 6 cut(s) 393, 412, 670, 836, 1113, 1152
SseBI AGGCCT 1 cut(s) 1381
SsiI CCGC 2 cut(s) 598, 928
SspMI CTAG 5 cut(s) 335, 629, 650, 815, 1088
StuI AGGCCT 1 cut(s) 1381
StyD4I CCNGG 4 cut(s) 115, 265, 461, 1065
StyI CCWWGG 2 cut(s) 60, 1176
TaaI ACNGT 1 cut(s) 1219
TaiI ACGT 1 cut(s) 762
TaqI TCGA 4 cut(s) 1018, 1062, 1097, 1182
TasI AATT 6 cut(s) 393, 412, 670, 836, 1113, 1152
TatI WGTACW 2 cut(s) 348, 768
TfiI GAWTC 2 cut(s) 405, 1145
Tru1I TTAA 2 cut(s) 254, 669
Tru9I TTAA 2 cut(s) 254, 669
TscAI CASTG 2 cut(s) 667, 1222
TseFI GTSAC 2 cut(s) 554, 856
TseI GCWGC 1 cut(s) 1035
Tsp45I GTSAC 2 cut(s) 554, 856
TspDTI ATGAA 5 cut(s) 17, 43, 867, 1278, 1332
TspRI CASTG 2 cut(s) 667, 1222
VpaK11BI GGWCC 3 cut(s) 244, 263, 308
XapI RAATTY 2 cut(s) 836, 1113
XcmI CCANNNNNNNNNTGG 1 cut(s) 838
XmiI GTMKAC 1 cut(s) 1182
XmnI GAANNNNTTC 1 cut(s) 611
XspI CTAG 5 cut(s) 335, 629, 650, 815, 1088
ZrmI AGTACT 1 cut(s) 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.