MD14G1148900.v1.1

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
24162065 .. 24166538
4474 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1148900.v1.1.491

Sequence Viewer

Length: 1407 bp
ATGTGTCCTTCTGAGACATGGAAGGCCATGTCAATGGCTGCAGCAATTTTTCTTCAGCTTTGCTCTTCCATGGAGGCTGTTGAGTCCTCTTCTCATCACCATCCTGATCACAAGATAACCAGCCTTCCTGGACAACCCCGTGTCGGATTCCAACATTTTTCGGGTTACATTACCGTGGACGATCACAATCACAAAGCTCTTTTTTACTACTTTGCTGAAGCCGAAATCACTCCAGCTTCAAAGCCTTTGGTCCTCTGGTTGAATGGAGGACCCGGTTGCTCTTCTCTTGGGGTAGGAGCATTCTCTGAGAATGGACCTTTTAGACCAGATGGTGAGGTTCTGGTTAGAAATGAGTACAGCTGGAATAGAGAGGCAAATATGTTGTATTTAGAGACACCAGTTGGAGTGGGATTCTCTTATGCTAAAACAAGCTCCTCCTATATAGCAGTGGATGATGAGGCAACAGCGAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCCCAGTACAAGCACAGGGATTTGTTTCTAACAGGAGAAAGTTATGCAGGTCACTACATCCCTCAACTTGCAAAGCTTATGATTGAAATCAACAGAAAGGAAAAGTTGTTCAGTCTAAAAGGAATTGCTCTGGGAAATCCTGTTCTAGAATTTGCCACGGACTTTAATTCGAGAGCGGAGTTCTTCTGGTCTCACGGGCTAATATCCGATTCAACATACAACATGTTCACTTCTGTCTGTAACTATTCGCGCTATGTGAGCGAGTACTACAGAGACTCGCTGTCGCCTGTTTGCTCAAGGGTTATGAGCCAAGTGAGCAAAGAAACAAGTAAATTTGTGGACAAGTATGATGTAACCCTAGATGTCTGCATTTCATCTGTGCTCTCACAATCCAAGGTTATAAGCCCCAATCAAATGACTGAGAGGATAGATGTGTGTGTTGAAGACAAAACTGTGAATTATTTGAACCGGAAAGATGTGCAAAAGGCTCTCCATGCGCGGCTTGTTGGAGTTCGGAGATGGGATGTTTGCAGCAACATTTTGGACTACCAAGTGCTCAACCTGGAAATACCTACAATCTCACTAGTCAGATCGCTTGTGAAGCAAGGAATCCCAGTCTTGGTGTACAGTGGAGATCAGGATTCTGTAATTCCATTAACGGGAAGCCGAAGGTTGGTATATAGATTGGCAATGGAGTTAGGATTGAACACCACTGTCCCTTATCGAGTTTGGTTCGAAGGAAAGCAGGTTGGTGGGTGGACTCAAGTTTACGGAAACATTCTCTCATTTGCCACCATCAGAGGTGCCTCCCATGAAGCTCCATTCTCACAGCCTGAGAGATCACTGAGGCTGTTTAAGTCATTTCTGGCAGGCAGGCCTCTGCCTGAAGTTTTCTGA

Protein Analysis

469

Amino Acids

52.86

Weight (kDa)

7.18

Isoelectric Point (pI)

43.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 43 - 460 3.5e-126 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 911
Acc36I ACCTGC 2 cut(s) 548, 1246
AccB1I GGYRCC 1 cut(s) 1313
AccBSI CCGCTC 1 cut(s) 686
AccII CGCG 2 cut(s) 760, 1009
AciI CCGC 2 cut(s) 686, 1009
AcsI RAATTY 2 cut(s) 659, 842
AcuI CTGAAG 2 cut(s) 38, 237
AfaI GTAC 4 cut(s) 356, 518, 776, 1136
AfiI CCNNNNNNNGG 4 cut(s) 143, 1129, 1169, 1183
AflIII ACRYGT 1 cut(s) 732
AgsI TTSAA 8 cut(s) 240, 262, 502, 596, 723, 953, 976, 1216
AhdI GACNNNNNGTC 1 cut(s) 790
AhlI ACTAGT 1 cut(s) 1093
AjnI CCWGG 2 cut(s) 127, 1071
AloI GAACNNNNNNTCC 4 cut(s) 602, 634, 636, 668
AluBI AGCT 7 cut(s) 58, 197, 236, 360, 432, 586, 1328
AluI AGCT 7 cut(s) 58, 197, 236, 360, 432, 586, 1328
Alw21I GWGCWC 2 cut(s) 894, 1068
Alw26I GTCTC 4 cut(s) 8, 386, 705, 777
AoxI GGCC 2 cut(s) 24, 1385
ApeKI GCWGC 3 cut(s) 38, 41, 1041
ApoI RAATTY 2 cut(s) 659, 842
AspLEI GCGC 2 cut(s) 762, 1009
AspS9I GGNCC 3 cut(s) 250, 269, 314
AsuC2I CCSGG 1 cut(s) 273
AsuHPI GGTGA 2 cut(s) 89, 344
AsuII TTCGAA 1 cut(s) 1245
AvaII GGWCC 3 cut(s) 250, 269, 314
BanI GGYRCC 1 cut(s) 1313
BbsI GAAGAC 1 cut(s) 960
Bbv12I GWGCWC 2 cut(s) 894, 1068
BbvI GCAGC 3 cut(s) 25, 53, 1053
BccI CCATC 4 cut(s) 108, 323, 1023, 1313
BciT130I CCWGG 2 cut(s) 129, 1073
BclI TGATCA 1 cut(s) 106
BcnI CCSGG 1 cut(s) 273
BcoDI GTCTC 4 cut(s) 8, 386, 705, 777
BcuI ACTAGT 1 cut(s) 1093
BfaI CTAG 3 cut(s) 656, 869, 1094
BfmI CTRYAG 2 cut(s) 39, 778
BfuAI ACCTGC 2 cut(s) 548, 1246
BisI GCNGC 4 cut(s) 39, 42, 1010, 1042
BlsI GCNGC 4 cut(s) 40, 43, 1011, 1043
BmcAI AGTACT 1 cut(s) 776
Bme1390I CCNGG 3 cut(s) 129, 273, 1073
Bme18I GGWCC 3 cut(s) 250, 269, 314
BmeRI GACNNNNNGTC 1 cut(s) 790
BmgT120I GGNCC 3 cut(s) 250, 269, 314
BmiI GGNNCC 2 cut(s) 271, 1315
BmrFI CCNGG 3 cut(s) 129, 273, 1073
BmrI ACTGGG 2 cut(s) 508, 1118
BmuI ACTGGG 2 cut(s) 508, 1118
BpiI GAAGAC 1 cut(s) 960
BpmI CTGGAG 1 cut(s) 216
Bpu14I TTCGAA 1 cut(s) 1245
BpuEI CTTGAG 2 cut(s) 790, 1257
BpuMI CCSGG 1 cut(s) 273
BsaBI GATNNNNATC 2 cut(s) 186, 596
BsaI GGTCTC 1 cut(s) 705
BsaJI CCNNGG 4 cut(s) 69, 174, 666, 903
BsaWI WCCGGW 1 cut(s) 978
Bsc4I CCNNNNNNNGG 4 cut(s) 143, 1129, 1169, 1183
Bse1I ACTGG 3 cut(s) 398, 514, 1124
Bse3DI GCAATG 1 cut(s) 1206
Bse8I GATNNNNATC 2 cut(s) 186, 596
BseBI CCWGG 2 cut(s) 129, 1073
BseDI CCNNGG 4 cut(s) 69, 174, 666, 903
BseGI GGATG 4 cut(s) 100, 457, 567, 1039
BseJI GATNNNNATC 2 cut(s) 186, 596
BseLI CCNNNNNNNGG 4 cut(s) 143, 1129, 1169, 1183
BseMI GCAATG 1 cut(s) 1206
BseMII CTCAG 4 cut(s) 297, 921, 1335, 1346
BseNI ACTGG 3 cut(s) 398, 514, 1124
BseRI GAGGAG 1 cut(s) 424
BseXI GCAGC 3 cut(s) 25, 53, 1053
Bsh1236I CGCG 2 cut(s) 760, 1009
BshFI GGCC 2 cut(s) 26, 1387
BshNI GGYRCC 1 cut(s) 1313
BsiHKAI GWGCWC 2 cut(s) 894, 1068
BsiSI CCGG 2 cut(s) 273, 979
BslFI GGGAC 2 cut(s) 485, 1211
BslI CCNNNNNNNGG 4 cut(s) 143, 1129, 1169, 1183
BsmAI GTCTC 4 cut(s) 8, 386, 705, 777
BsmFI GGGAC 2 cut(s) 485, 1211
BsmI GAATGC 1 cut(s) 299
BsnI GGCC 2 cut(s) 26, 1387
Bso31I GGTCTC 1 cut(s) 705
Bsp119I TTCGAA 1 cut(s) 1245
Bsp1286I GDGCHC 2 cut(s) 894, 1068
Bsp1407I TGTACA 1 cut(s) 1134
Bsp143I GATC 5 cut(s) 106, 181, 1100, 1144, 1349
Bsp19I CCATGG 1 cut(s) 69
BspACI CCGC 2 cut(s) 686, 1009
BspANI GGCC 2 cut(s) 26, 1387
BspCNI CTCAG 5 cut(s) 4, 298, 922, 1336, 1347
BspFNI CGCG 2 cut(s) 760, 1009
BspLI GGNNCC 2 cut(s) 271, 1315
BspMAI CTGCAG 1 cut(s) 43
BspMI ACCTGC 2 cut(s) 548, 1246
BspQI GCTCTTC 2 cut(s) 70, 286
BspT104I TTCGAA 1 cut(s) 1245
BspT107I GGYRCC 1 cut(s) 1313
BspTNI GGTCTC 1 cut(s) 705
BsrBI CCGCTC 1 cut(s) 686
BsrDI GCAATG 1 cut(s) 1206
BsrGI TGTACA 1 cut(s) 1134
BsrI ACTGG 3 cut(s) 398, 514, 1124
BssECI CCNNGG 4 cut(s) 69, 174, 666, 903
BssMI GATC 5 cut(s) 106, 181, 1100, 1144, 1349
BssT1I CCWWGG 2 cut(s) 69, 903
Bst2UI CCWGG 2 cut(s) 129, 1073
Bst4CI ACNGT 4 cut(s) 175, 964, 1139, 1225
Bst6I CTCTTC 3 cut(s) 70, 94, 286
BstAUI TGTACA 1 cut(s) 1134
BstBI TTCGAA 1 cut(s) 1245
BstC8I GCNNGC 2 cut(s) 1381, 1385
BstDEI CTNAG 5 cut(s) 12, 306, 930, 1344, 1355
BstDSI CCRYGG 3 cut(s) 69, 174, 666
BstF5I GGATG 4 cut(s) 100, 457, 567, 1039
BstFNI CGCG 2 cut(s) 760, 1009
BstHHI GCGC 2 cut(s) 762, 1009
BstKTI GATC 5 cut(s) 109, 184, 1103, 1147, 1352
BstMAI GTCTC 4 cut(s) 8, 386, 705, 777
BstMBI GATC 5 cut(s) 106, 181, 1100, 1144, 1349
BstMWI GCNNNNNNNGC 4 cut(s) 768, 825, 1004, 1111
BstNI CCWGG 2 cut(s) 129, 1073
BstNSI RCATGY 1 cut(s) 736
BstSCI CCNGG 3 cut(s) 127, 271, 1071
BstSFI CTRYAG 2 cut(s) 39, 778
BstUI CGCG 2 cut(s) 760, 1009
BstV1I GCAGC 3 cut(s) 25, 53, 1053
BstV2I GAAGAC 1 cut(s) 960
BstXI CCANNNNNNTGG 1 cut(s) 34
BsuRI GGCC 2 cut(s) 26, 1387
BtgI CCRYGG 3 cut(s) 69, 174, 666
BtsCI GGATG 4 cut(s) 100, 457, 567, 1039
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 4 cut(s) 453, 1144, 1221, 1352
BveI ACCTGC 2 cut(s) 548, 1246
Cac8I GCNNGC 2 cut(s) 1381, 1385
CfoI GCGC 2 cut(s) 762, 1009
Cfr13I GGNCC 3 cut(s) 250, 269, 314
Csp6I GTAC 4 cut(s) 355, 517, 775, 1135
CviAII CATG 6 cut(s) 18, 28, 70, 733, 1004, 1322
CviQI GTAC 4 cut(s) 355, 517, 775, 1135
DdeI CTNAG 5 cut(s) 12, 306, 930, 1344, 1355
DpnI GATC 5 cut(s) 108, 183, 1102, 1146, 1351
DpnII GATC 5 cut(s) 106, 181, 1100, 1144, 1349
DriI GACNNNNNGTC 1 cut(s) 790
Eam1104I CTCTTC 3 cut(s) 70, 94, 286
Eam1105I GACNNNNNGTC 1 cut(s) 790
EarI CTCTTC 3 cut(s) 70, 94, 286
Eco130I CCWWGG 2 cut(s) 69, 903
Eco147I AGGCCT 1 cut(s) 1387
Eco31I GGTCTC 1 cut(s) 705
Eco47I GGWCC 3 cut(s) 250, 269, 314
Eco57I CTGAAG 2 cut(s) 38, 237
EcoO109I RGGNCCY 1 cut(s) 269
EcoRII CCWGG 2 cut(s) 127, 1071
EcoT14I CCWWGG 2 cut(s) 69, 903
ErhI CCWWGG 2 cut(s) 69, 903
FaeI CATG 6 cut(s) 21, 31, 73, 736, 1007, 1325
FaqI GGGAC 2 cut(s) 485, 1211
FatI CATG 6 cut(s) 17, 27, 69, 732, 1003, 1321
FbaI TGATCA 1 cut(s) 106
Fnu4HI GCNGC 4 cut(s) 39, 42, 1010, 1042
FokI GGATG 4 cut(s) 87, 464, 554, 1046
Fsp4HI GCNGC 4 cut(s) 39, 42, 1010, 1042
FspBI CTAG 3 cut(s) 656, 869, 1094
GlaI GCGC 2 cut(s) 761, 1008
GluI GCNGC 4 cut(s) 39, 42, 1010, 1042
GsuI CTGGAG 1 cut(s) 216
HaeIII GGCC 2 cut(s) 26, 1387
HapII CCGG 2 cut(s) 273, 979
HhaI GCGC 2 cut(s) 762, 1009
Hin1II CATG 6 cut(s) 21, 31, 73, 736, 1007, 1325
Hin6I GCGC 2 cut(s) 760, 1007
HinP1I GCGC 2 cut(s) 760, 1007
HindIII AAGCTT 1 cut(s) 584
HinfI GANTC 8 cut(s) 83, 147, 411, 719, 785, 1119, 1151, 1270
HpaII CCGG 2 cut(s) 273, 979
HphI GGTGA 2 cut(s) 89, 344
Hpy166II GTNNAC 6 cut(s) 178, 738, 850, 1135, 1269, 1279
Hpy188I TCNGA 8 cut(s) 13, 146, 307, 718, 1026, 1100, 1310, 1406
Hpy188III TCNNGA 4 cut(s) 104, 656, 681, 1148
Hpy8I GTNNAC 6 cut(s) 178, 738, 850, 1135, 1269, 1279
HpyAV CCTTC 5 cut(s) 16, 18, 134, 1173, 1241
HpyCH4III ACNGT 4 cut(s) 175, 964, 1139, 1225
HpyCH4V TGCA 7 cut(s) 41, 490, 557, 581, 879, 991, 1041
HpyF10VI GCNNNNNNNGC 4 cut(s) 768, 825, 1004, 1111
HpyF3I CTNAG 5 cut(s) 12, 306, 930, 1344, 1355
Hsp92II CATG 6 cut(s) 21, 31, 73, 736, 1007, 1325
HspAI GCGC 2 cut(s) 760, 1007
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 5 cut(s) 106, 181, 1100, 1144, 1349
LguI GCTCTTC 2 cut(s) 70, 286
LmnI GCTCC 3 cut(s) 296, 437, 1333
Lsp1109I GCAGC 3 cut(s) 25, 53, 1053
MaeI CTAG 3 cut(s) 656, 869, 1094
MaeIII GTNAC 4 cut(s) 164, 560, 749, 862
MalI GATC 5 cut(s) 108, 183, 1102, 1146, 1351
MbiI CCGCTC 1 cut(s) 686
MboI GATC 5 cut(s) 106, 181, 1100, 1144, 1349
MboII GAAGA 6 cut(s) 44, 57, 81, 273, 685, 965
MhlI GDGCHC 2 cut(s) 894, 1068
MluCI AATT 7 cut(s) 45, 633, 659, 676, 842, 967, 1158
MlyI GAGTC 3 cut(s) 92, 779, 1264
MmeI TCCRAC 4 cut(s) 124, 175, 382, 997
MseI TTAA 3 cut(s) 675, 1166, 1365
MslI CAYNNNNRTG 2 cut(s) 32, 173
MspA1I CMGCKG 1 cut(s) 360
MspI CCGG 2 cut(s) 273, 979
MspR9I CCNGG 3 cut(s) 129, 273, 1073
Mva1269I GAATGC 1 cut(s) 299
MvaI CCWGG 2 cut(s) 129, 1073
MvnI CGCG 2 cut(s) 760, 1009
MwoI GCNNNNNNNGC 4 cut(s) 768, 825, 1004, 1111
NciI CCSGG 1 cut(s) 273
NcoI CCATGG 1 cut(s) 69
NdeII GATC 5 cut(s) 106, 181, 1100, 1144, 1349
NlaIII CATG 6 cut(s) 21, 31, 73, 736, 1007, 1325
NlaIV GGNNCC 2 cut(s) 271, 1315
NmuCI GTSAC 1 cut(s) 560
NspI RCATGY 1 cut(s) 736
NspV TTCGAA 1 cut(s) 1245
PceI AGGCCT 1 cut(s) 1387
PciI ACATGT 1 cut(s) 732
PciSI GCTCTTC 2 cut(s) 70, 286
PctI GAATGC 1 cut(s) 299
PfeI GAWTC 5 cut(s) 147, 411, 719, 1119, 1151
PfoI TCCNGGA 1 cut(s) 127
PkrI GCNGC 4 cut(s) 40, 43, 1011, 1043
PleI GAGTC 3 cut(s) 91, 779, 1264
PpsI GAGTC 3 cut(s) 91, 779, 1264
PpuMI RGGWCCY 1 cut(s) 269
PscI ACATGT 1 cut(s) 732
PsiI TTATAA 1 cut(s) 911
Psp5II RGGWCCY 1 cut(s) 269
Psp6I CCWGG 2 cut(s) 127, 1071
PspGI CCWGG 2 cut(s) 127, 1071
PspN4I GGNNCC 2 cut(s) 271, 1315
PspPI GGNCC 3 cut(s) 250, 269, 314
PspPPI RGGWCCY 1 cut(s) 269
PstI CTGCAG 1 cut(s) 43
PvuII CAGCTG 1 cut(s) 360
RsaI GTAC 4 cut(s) 356, 518, 776, 1136
RsaNI GTAC 4 cut(s) 355, 517, 775, 1135
RseI CAYNNNNRTG 2 cut(s) 32, 173
SapI GCTCTTC 2 cut(s) 70, 286
SaqAI TTAA 3 cut(s) 675, 1166, 1365
SatI GCNGC 4 cut(s) 39, 42, 1010, 1042
Sau3AI GATC 5 cut(s) 106, 181, 1100, 1144, 1349
Sau96I GGNCC 3 cut(s) 250, 269, 314
ScaI AGTACT 1 cut(s) 776
SchI GAGTC 3 cut(s) 92, 779, 1264
ScrFI CCNGG 3 cut(s) 129, 273, 1073
SduI GDGCHC 2 cut(s) 894, 1068
SfcI CTRYAG 2 cut(s) 39, 778
SfuI TTCGAA 1 cut(s) 1245
SinI GGWCC 3 cut(s) 250, 269, 314
SmiMI CAYNNNNRTG 2 cut(s) 32, 173
SmlI CTYRAG 2 cut(s) 805, 1272
SmoI CTYRAG 2 cut(s) 805, 1272
SpeI ACTAGT 1 cut(s) 1093
Sse9I AATT 7 cut(s) 45, 633, 659, 676, 842, 967, 1158
SseBI AGGCCT 1 cut(s) 1387
SsiI CCGC 2 cut(s) 686, 1009
SspMI CTAG 3 cut(s) 656, 869, 1094
StuI AGGCCT 1 cut(s) 1387
StyD4I CCNGG 3 cut(s) 127, 271, 1071
StyI CCWWGG 2 cut(s) 69, 903
TaaI ACNGT 4 cut(s) 175, 964, 1139, 1225
TaqI TCGA 3 cut(s) 680, 1234, 1245
TasI AATT 7 cut(s) 45, 633, 659, 676, 842, 967, 1158
TatI WGTACW 4 cut(s) 354, 516, 774, 1134
TauI GCSGC 1 cut(s) 1012
TfiI GAWTC 5 cut(s) 147, 411, 719, 1119, 1151
Tru1I TTAA 3 cut(s) 675, 1166, 1365
Tru9I TTAA 3 cut(s) 675, 1166, 1365
TscAI CASTG 4 cut(s) 453, 1144, 1228, 1359
TseFI GTSAC 1 cut(s) 560
TseI GCWGC 3 cut(s) 38, 41, 1041
Tsp45I GTSAC 1 cut(s) 560
TspDTI ATGAA 2 cut(s) 873, 1338
TspGWI ACGGA 2 cut(s) 683, 1296
TspRI CASTG 4 cut(s) 453, 1144, 1228, 1359
VpaK11BI GGWCC 3 cut(s) 250, 269, 314
XapI RAATTY 2 cut(s) 659, 842
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 1 cut(s) 736
XspI CTAG 3 cut(s) 656, 869, 1094
ZrmI AGTACT 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.