pycom06g12410

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
17532026 .. 17535063
3038 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g12410.4

Sequence Viewer

Length: 1404 bp
ATGTTTTCTTCTCATACATGGAAGGCCATGGCAATGGCTGCGGCACTTGTACTTCAGACCTACTCTTCCATGGAGGTTGTTGAGTCCTCATCTCACCACCATCCTGATCACAAGCTAACCAGCCTTCCTGGACAACCCCATGTCGGATTCCAACAGTTTTCTGGTTACATTACTGTGGACGATCACAACCATAAAGCTCTCTTTTACTACTTTGCTGAAGCAGAAATCAATCCAGCTTCAAAGCCTTTGGTCCTCTGGTTGAACGGAGGACCTGGTTGTTCTTCTCTTGGAGTAGGAGCATTCTCTGAGAATGGACCTTTTAGACCAGATGGTGAGGTCTTGGTTAGAAATGAGTACAGCTGGAATAGAGAGGCAAATATGTTGTATTTAGAGACACCAGTTGGAGTGGGATTCTCTTATTCTAAATCCAACTCCTCCTATATGGCAGTGGATGATGAGGCAACAGCCACGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCCCAATACAGGCACACGGATTTATTTCTAGCAGGAGAGAGTTACGCAGGTCACTACATCCCTCAACTTGCGAAGCTCGTTGTTGAAATCAACAGAAAGGAGAAGTTCAATCTAAAAGGAATTGCTCTGGGAAATCCTGTTCTAGAATTTGCCACGGACTTGAATTCGCAGGCGGAGTTCCTTTGGTCTCACGGGCTGATATCCGATTCAACATACAACATGTTCACTTCTGTCTGTAACTATTCGCGCTATGTGAGCGAGTACTACAGACACTCGGTCTCACCTGTTTGCTCAAGGGTTATGAGCCAAGTGACCAAGGAAACAAGTCAATTTGTGGACAAGTATGATGTAACCCTAGATGTCTGTATTTCATCTGTGCTTTCACAATCCAAGTTTATAAGCCCCAATCAAATGACTGAGAGGATAGATGTGTGTGTTGAAGACAAAACTGTGAATTATTTGAACCGGAAAGATGTGCAAAAGGCTCTCCATGCGCGGCTTGTTGGCGTGCGCAGATGGGATGTTTGCAGCAGCATTTTGGAGTACCAAATGCTCAACCTGGAAGTACCGACAATCTCATTAGTTGGATCGCTTGTGAAGCAAGGCATCCAAGTCTTGGTGTACAGTGGAGATCAGGATTCTGTAATTCCATTAACGGGAAGCCGAAGATTGGTCTCTAGATTGGCAAGGGAGTTAGAATTGAACACCACTGTCCCTTATCGAGTTTGGTTCGAGGGAAAGCAGGTTGGTGGGTGGACTCAAGTTTATGGAAACATTCTGTCATTTGCCACCATCAGAGGTGCCTCTCATGAAGCTCCATTCTCACAGCCTGAGAGATCACTGAGGCTATTTAAGTCATTTCTGGAAGGCAGGCATCTGCCTGAAGTTTTCTGA

Protein Analysis

468

Amino Acids

52.74

Weight (kDa)

6.32

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 908
Acc16I TGCGCA 1 cut(s) 1022
Acc36I ACCTGC 2 cut(s) 548, 1243
AccB1I GGYRCC 1 cut(s) 1310
AccB7I CCANNNNNTGG 1 cut(s) 1126
AccII CGCG 2 cut(s) 757, 1006
AciI CCGC 3 cut(s) 41, 683, 1006
AclWI GGATC 1 cut(s) 1105
AcsI RAATTY 2 cut(s) 656, 673
AcuI CTGAAG 2 cut(s) 38, 237
AfaI GTAC 6 cut(s) 51, 356, 773, 1055, 1077, 1133
AfiI CCNNNNNNNGG 5 cut(s) 143, 519, 1126, 1166, 1180
AflIII ACRYGT 1 cut(s) 729
AhdI GACNNNNNGTC 1 cut(s) 785
AjnI CCWGG 3 cut(s) 127, 271, 1068
AloI GAACNNNNNNTCC 2 cut(s) 633, 665
AluBI AGCT 6 cut(s) 115, 197, 236, 360, 586, 1325
AluI AGCT 6 cut(s) 115, 197, 236, 360, 586, 1325
Alw26I GTCTC 4 cut(s) 386, 702, 793, 1189
AlwI GGATC 1 cut(s) 1105
AoxI GGCC 1 cut(s) 24
ApeKI GCWGC 3 cut(s) 38, 1038, 1041
ApoI RAATTY 2 cut(s) 656, 673
AspLEI GCGC 3 cut(s) 759, 1006, 1023
AspS9I GGNCC 3 cut(s) 250, 269, 314
AsuHPI GGTGA 3 cut(s) 86, 344, 783
AvaII GGWCC 3 cut(s) 250, 269, 314
BanI GGYRCC 1 cut(s) 1310
BbsI GAAGAC 1 cut(s) 957
BbvI GCAGC 3 cut(s) 25, 1050, 1053
BccI CCATC 4 cut(s) 108, 323, 1020, 1310
BciT130I CCWGG 3 cut(s) 129, 273, 1070
BclI TGATCA 1 cut(s) 106
BcoDI GTCTC 4 cut(s) 386, 702, 793, 1189
BfaI CTAG 4 cut(s) 539, 653, 866, 1188
BfmI CTRYAG 1 cut(s) 775
BfuAI ACCTGC 2 cut(s) 548, 1243
BisI GCNGC 5 cut(s) 39, 42, 1007, 1039, 1042
BlsI GCNGC 5 cut(s) 40, 43, 1008, 1040, 1043
BmcAI AGTACT 1 cut(s) 773
Bme1390I CCNGG 3 cut(s) 129, 273, 1070
Bme18I GGWCC 3 cut(s) 250, 269, 314
BmeRI GACNNNNNGTC 1 cut(s) 785
BmgT120I GGNCC 3 cut(s) 250, 269, 314
BmiI GGNNCC 1 cut(s) 1312
BmrFI CCNGG 3 cut(s) 129, 273, 1070
BmsI GCATC 2 cut(s) 1125, 1393
BpiI GAAGAC 1 cut(s) 957
BpuEI CTTGAG 2 cut(s) 787, 1254
BsaI GGTCTC 3 cut(s) 702, 793, 1189
BsaJI CCNNGG 5 cut(s) 27, 69, 468, 663, 825
BsaWI WCCGGW 1 cut(s) 975
Bsc4I CCNNNNNNNGG 5 cut(s) 143, 519, 1126, 1166, 1180
Bse1I ACTGG 1 cut(s) 398
Bse3DI GCAATG 1 cut(s) 39
BseBI CCWGG 3 cut(s) 129, 273, 1070
BseDI CCNNGG 5 cut(s) 27, 69, 468, 663, 825
BseGI GGATG 5 cut(s) 100, 457, 567, 1036, 1116
BseLI CCNNNNNNNGG 5 cut(s) 143, 519, 1126, 1166, 1180
BseMI GCAATG 1 cut(s) 39
BseMII CTCAG 4 cut(s) 297, 918, 1332, 1343
BseNI ACTGG 1 cut(s) 398
BseRI GAGGAG 1 cut(s) 424
BseXI GCAGC 3 cut(s) 25, 1050, 1053
Bsh1236I CGCG 2 cut(s) 757, 1006
BshFI GGCC 1 cut(s) 26
BshNI GGYRCC 1 cut(s) 1310
BsiSI CCGG 1 cut(s) 976
BslFI GGGAC 1 cut(s) 1208
BslI CCNNNNNNNGG 5 cut(s) 143, 519, 1126, 1166, 1180
BsmAI GTCTC 4 cut(s) 386, 702, 793, 1189
BsmFI GGGAC 1 cut(s) 1208
BsmI GAATGC 1 cut(s) 299
BsnI GGCC 1 cut(s) 26
Bso31I GGTCTC 3 cut(s) 702, 793, 1189
Bsp1407I TGTACA 1 cut(s) 1131
Bsp143I GATC 5 cut(s) 106, 181, 1097, 1141, 1346
Bsp19I CCATGG 2 cut(s) 27, 69
BspACI CCGC 3 cut(s) 41, 683, 1006
BspANI GGCC 1 cut(s) 26
BspCNI CTCAG 4 cut(s) 298, 919, 1333, 1344
BspFNI CGCG 2 cut(s) 757, 1006
BspHI TCATGA 1 cut(s) 1318
BspLI GGNNCC 1 cut(s) 1312
BspMI ACCTGC 2 cut(s) 548, 1243
BspPI GGATC 1 cut(s) 1105
BspT107I GGYRCC 1 cut(s) 1310
BspTNI GGTCTC 3 cut(s) 702, 793, 1189
BsrDI GCAATG 1 cut(s) 39
BsrGI TGTACA 1 cut(s) 1131
BsrI ACTGG 1 cut(s) 398
BssECI CCNNGG 5 cut(s) 27, 69, 468, 663, 825
BssMI GATC 5 cut(s) 106, 181, 1097, 1141, 1346
BssT1I CCWWGG 3 cut(s) 27, 69, 825
Bst2UI CCWGG 3 cut(s) 129, 273, 1070
Bst4CI ACNGT 5 cut(s) 156, 175, 961, 1136, 1222
Bst6I CTCTTC 1 cut(s) 70
BstAPI GCANNNNNTGC 1 cut(s) 38
BstAUI TGTACA 1 cut(s) 1131
BstC8I GCNNGC 3 cut(s) 681, 1019, 1382
BstDEI CTNAG 4 cut(s) 306, 927, 1341, 1352
BstDSI CCRYGG 4 cut(s) 27, 69, 468, 663
BstF5I GGATG 5 cut(s) 100, 457, 567, 1036, 1116
BstFNI CGCG 2 cut(s) 757, 1006
BstHHI GCGC 3 cut(s) 759, 1006, 1023
BstKTI GATC 5 cut(s) 109, 184, 1100, 1144, 1349
BstMAI GTCTC 4 cut(s) 386, 702, 793, 1189
BstMBI GATC 5 cut(s) 106, 181, 1097, 1141, 1346
BstMWI GCNNNNNNNGC 4 cut(s) 38, 765, 1001, 1108
BstNI CCWGG 3 cut(s) 129, 273, 1070
BstNSI RCATGY 1 cut(s) 733
BstSCI CCNGG 3 cut(s) 127, 271, 1068
BstSFI CTRYAG 1 cut(s) 775
BstUI CGCG 2 cut(s) 757, 1006
BstV1I GCAGC 3 cut(s) 25, 1050, 1053
BstV2I GAAGAC 1 cut(s) 957
BstXI CCANNNNNNTGG 1 cut(s) 34
BsuRI GGCC 1 cut(s) 26
BtgI CCRYGG 4 cut(s) 27, 69, 468, 663
BtsCI GGATG 5 cut(s) 100, 457, 567, 1036, 1116
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 4 cut(s) 453, 1141, 1218, 1349
BveI ACCTGC 2 cut(s) 548, 1243
Cac8I GCNNGC 3 cut(s) 681, 1019, 1382
CciI TCATGA 1 cut(s) 1318
CfoI GCGC 3 cut(s) 759, 1006, 1023
Cfr13I GGNCC 3 cut(s) 250, 269, 314
CsiI ACCWGGT 1 cut(s) 271
Csp6I GTAC 6 cut(s) 50, 355, 772, 1054, 1076, 1132
CviAII CATG 7 cut(s) 18, 28, 70, 140, 730, 1001, 1319
CviQI GTAC 6 cut(s) 50, 355, 772, 1054, 1076, 1132
DdeI CTNAG 4 cut(s) 306, 927, 1341, 1352
DpnI GATC 5 cut(s) 108, 183, 1099, 1143, 1348
DpnII GATC 5 cut(s) 106, 181, 1097, 1141, 1346
DriI GACNNNNNGTC 1 cut(s) 785
Eam1104I CTCTTC 1 cut(s) 70
Eam1105I GACNNNNNGTC 1 cut(s) 785
EarI CTCTTC 1 cut(s) 70
EciI GGCGGA 1 cut(s) 698
Eco130I CCWWGG 3 cut(s) 27, 69, 825
Eco31I GGTCTC 3 cut(s) 702, 793, 1189
Eco32I GATATC 1 cut(s) 711
Eco47I GGWCC 3 cut(s) 250, 269, 314
Eco57I CTGAAG 2 cut(s) 38, 237
EcoO109I RGGNCCY 1 cut(s) 269
EcoRI GAATTC 1 cut(s) 673
EcoRII CCWGG 3 cut(s) 127, 271, 1068
EcoRV GATATC 1 cut(s) 711
EcoT14I CCWWGG 3 cut(s) 27, 69, 825
ErhI CCWWGG 3 cut(s) 27, 69, 825
FaeI CATG 7 cut(s) 21, 31, 73, 143, 733, 1004, 1322
FaqI GGGAC 1 cut(s) 1208
FatI CATG 7 cut(s) 17, 27, 69, 139, 729, 1000, 1318
FbaI TGATCA 1 cut(s) 106
Fnu4HI GCNGC 5 cut(s) 39, 42, 1007, 1039, 1042
FokI GGATG 5 cut(s) 87, 464, 554, 1043, 1103
Fsp4HI GCNGC 5 cut(s) 39, 42, 1007, 1039, 1042
FspBI CTAG 4 cut(s) 539, 653, 866, 1188
FspI TGCGCA 1 cut(s) 1022
GlaI GCGC 3 cut(s) 758, 1005, 1022
GluI GCNGC 5 cut(s) 39, 42, 1007, 1039, 1042
HaeIII GGCC 1 cut(s) 26
HapII CCGG 1 cut(s) 976
HhaI GCGC 3 cut(s) 759, 1006, 1023
Hin1II CATG 7 cut(s) 21, 31, 73, 143, 733, 1004, 1322
Hin6I GCGC 3 cut(s) 757, 1004, 1021
HinP1I GCGC 3 cut(s) 757, 1004, 1021
HinfI GANTC 6 cut(s) 83, 147, 411, 716, 1148, 1267
HpaII CCGG 1 cut(s) 976
HphI GGTGA 3 cut(s) 86, 344, 783
Hpy166II GTNNAC 5 cut(s) 178, 735, 847, 1132, 1266
Hpy188I TCNGA 6 cut(s) 57, 146, 307, 715, 1307, 1403
Hpy188III TCNNGA 6 cut(s) 104, 653, 1145, 1188, 1319, 1373
Hpy8I GTNNAC 5 cut(s) 178, 735, 847, 1132, 1266
HpyAV CCTTC 3 cut(s) 16, 134, 1370
HpyCH4III ACNGT 5 cut(s) 156, 175, 961, 1136, 1222
HpyCH4V TGCA 3 cut(s) 490, 988, 1038
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 765, 1001, 1108
HpyF3I CTNAG 4 cut(s) 306, 927, 1341, 1352
Hsp92II CATG 7 cut(s) 21, 31, 73, 143, 733, 1004, 1322
HspAI GCGC 3 cut(s) 757, 1004, 1021
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 5 cut(s) 106, 181, 1097, 1141, 1346
LmnI GCTCC 2 cut(s) 296, 1330
Lsp1109I GCAGC 3 cut(s) 25, 1050, 1053
LweI GCATC 2 cut(s) 1125, 1393
MabI ACCWGGT 1 cut(s) 271
MaeI CTAG 4 cut(s) 539, 653, 866, 1188
MaeIII GTNAC 6 cut(s) 164, 551, 560, 746, 820, 859
MalI GATC 5 cut(s) 108, 183, 1099, 1143, 1348
MboI GATC 5 cut(s) 106, 181, 1097, 1141, 1346
MboII GAAGA 4 cut(s) 57, 273, 962, 1188
MluCI AATT 7 cut(s) 630, 656, 673, 839, 964, 1155, 1208
MlyI GAGTC 2 cut(s) 92, 1261
MmeI TCCRAC 5 cut(s) 124, 175, 382, 453, 1075
MseI TTAA 2 cut(s) 1163, 1362
MslI CAYNNNNRTG 2 cut(s) 32, 173
MspA1I CMGCKG 1 cut(s) 360
MspI CCGG 1 cut(s) 976
MspR9I CCNGG 3 cut(s) 129, 273, 1070
Mva1269I GAATGC 1 cut(s) 299
MvaI CCWGG 3 cut(s) 129, 273, 1070
MvnI CGCG 2 cut(s) 757, 1006
MwoI GCNNNNNNNGC 4 cut(s) 38, 765, 1001, 1108
NcoI CCATGG 2 cut(s) 27, 69
NdeII GATC 5 cut(s) 106, 181, 1097, 1141, 1346
NlaIII CATG 7 cut(s) 21, 31, 73, 143, 733, 1004, 1322
NlaIV GGNNCC 1 cut(s) 1312
NmuCI GTSAC 2 cut(s) 560, 820
NsbI TGCGCA 1 cut(s) 1022
NspI RCATGY 1 cut(s) 733
PagI TCATGA 1 cut(s) 1318
PciI ACATGT 1 cut(s) 729
PctI GAATGC 1 cut(s) 299
PfeI GAWTC 4 cut(s) 147, 411, 716, 1148
PflMI CCANNNNNTGG 1 cut(s) 1126
PfoI TCCNGGA 1 cut(s) 127
PkrI GCNGC 5 cut(s) 40, 43, 1008, 1040, 1043
PleI GAGTC 2 cut(s) 91, 1261
PpsI GAGTC 2 cut(s) 91, 1261
PpuMI RGGWCCY 1 cut(s) 269
PscI ACATGT 1 cut(s) 729
PsiI TTATAA 1 cut(s) 908
Psp5II RGGWCCY 1 cut(s) 269
Psp6I CCWGG 3 cut(s) 127, 271, 1068
PspGI CCWGG 3 cut(s) 127, 271, 1068
PspN4I GGNNCC 1 cut(s) 1312
PspPI GGNCC 3 cut(s) 250, 269, 314
PspPPI RGGWCCY 1 cut(s) 269
PvuII CAGCTG 1 cut(s) 360
RsaI GTAC 6 cut(s) 51, 356, 773, 1055, 1077, 1133
RsaNI GTAC 6 cut(s) 50, 355, 772, 1054, 1076, 1132
RseI CAYNNNNRTG 2 cut(s) 32, 173
SaqAI TTAA 2 cut(s) 1163, 1362
SatI GCNGC 5 cut(s) 39, 42, 1007, 1039, 1042
Sau3AI GATC 5 cut(s) 106, 181, 1097, 1141, 1346
Sau96I GGNCC 3 cut(s) 250, 269, 314
ScaI AGTACT 1 cut(s) 773
SchI GAGTC 2 cut(s) 92, 1261
ScrFI CCNGG 3 cut(s) 129, 273, 1070
SexAI ACCWGGT 1 cut(s) 271
SfaNI GCATC 2 cut(s) 1125, 1393
SfcI CTRYAG 1 cut(s) 775
SinI GGWCC 3 cut(s) 250, 269, 314
SmiMI CAYNNNNRTG 2 cut(s) 32, 173
SmlI CTYRAG 2 cut(s) 802, 1269
SmoI CTYRAG 2 cut(s) 802, 1269
Sse9I AATT 7 cut(s) 630, 656, 673, 839, 964, 1155, 1208
SsiI CCGC 3 cut(s) 41, 683, 1006
SspMI CTAG 4 cut(s) 539, 653, 866, 1188
StyD4I CCNGG 3 cut(s) 127, 271, 1068
StyI CCWWGG 3 cut(s) 27, 69, 825
TaaI ACNGT 5 cut(s) 156, 175, 961, 1136, 1222
TaqI TCGA 2 cut(s) 1231, 1242
TaqII GACCGA 1 cut(s) 775
TasI AATT 7 cut(s) 630, 656, 673, 839, 964, 1155, 1208
TatI WGTACW 4 cut(s) 49, 354, 771, 1131
TauI GCSGC 2 cut(s) 44, 1009
TfiI GAWTC 4 cut(s) 147, 411, 716, 1148
Tru1I TTAA 2 cut(s) 1163, 1362
Tru9I TTAA 2 cut(s) 1163, 1362
TscAI CASTG 4 cut(s) 453, 1141, 1225, 1356
TseFI GTSAC 2 cut(s) 560, 820
TseI GCWGC 3 cut(s) 38, 1038, 1041
Tsp45I GTSAC 2 cut(s) 560, 820
TspDTI ATGAA 2 cut(s) 870, 1335
TspGWI ACGGA 4 cut(s) 279, 485, 542, 680
TspRI CASTG 4 cut(s) 453, 1141, 1225, 1356
Van91I CCANNNNNTGG 1 cut(s) 1126
VpaK11BI GGWCC 3 cut(s) 250, 269, 314
XapI RAATTY 2 cut(s) 656, 673
XbaI TCTAGA 2 cut(s) 652, 1187
XceI RCATGY 1 cut(s) 733
XcmI CCANNNNNNNNNTGG 1 cut(s) 158
XspI CTAG 4 cut(s) 539, 653, 866, 1188
ZrmI AGTACT 1 cut(s) 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.