RLG00000007099

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
13577099 .. 13579723
2625 bp
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UTR
Exon/CDS
Intron
RLM00000007099

Sequence Viewer

Length: 1386 bp
ATGAGTTCTGTACCATGGAAAACCATTGCAATGGCTTTGGTTTTGCTACAAATTACAGAAGCTTCCCCTCTTTTTAGTCTCTCTAGACTTGATAGAATTACCCGGTTGCCGGGTCAACCCCAAGTCGGGTTCCAACACTATTCGGGTTATGTTACCGTTGATGAGAAAAAACAAAGAGCTCTGTTTTACTACTTTGCTGAAGCTGAAATTGAACCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCCGGTTGTTCTTCTCTGGGAGTTGGAGCATTTTCTGAAAATGGGCCATTTAGGCCTAGTGGAGAGGTATTGGTTAGAAACGAATATAGTTGGAATAGAGAAGCAAACATGCTCTATTTGGAGACACCAATTGGAGTTGGGTTCTCTTATTCAACTGATACCGCTTCTTATGAGTCTGTAAATGACCATATTACAGCCAGGGACAATCTGATGTTCTTACAAAAGTGGCTGGACAAATTCCCTCAATATAGAAACAGAAGCTTGTTTATTACAGGAGAAAGCTATGCTGGTCATTATGTTCCCCAGCTAGCAGAACTCATGCTCCAATTCAACAAGGAGTATCACTTCAATTTAAAAGGAATTGCTTTGGGTAATCCAGTCCTAGAATATGCTACTGACTTCAATTCAAGATCCGAGTTCTTTTGGTCTCATGGATTGATATCAGATTCAACGTACAAAATGTTCACTTCAGTCTGTAACTATTCAAGATATGTGAGTGAATATTATAGAGGCTCGGTTTCACCTATTTGTTCCAAGGTGATGAGTCAAGTCAGCAGAGAAACCAGTAAATTTGTTGACAAATATGATGTCACTCTTGATGTTTGTATATCATCTGTGTTCTCCCAATCCAAAGTCCTCAGTCCCCAGCAAGTTACTGAGTCAATAGATGTATGCGTGGAAGATGAAACAGTAAACTATTTAAACAGGCTGGATGTGCAGAAGGCACTTCATGCTCGCCTTGTTGGTGTTCGGAAATGGGCAGTTTGCAGCAATGTATTGGATTATGAGCTGCTGGATTTGGAGATACCAACAATCACAATTGTAGGCAAACTCATTAAGGCAGGAATATCAGTCTTGGTTTACAGTGGCGACCAAGATTCTGTTATTCCATTGACCGGTAGTCGAACATTAGTTCATGGACTTGCAGAGGAACTAAAACTAAATACCACCGTTCCTTATAGAGTCTGGTTTGAGGGGCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGTAATATGCTTTCCTTCGCCACCATTAGAGGAGCATCGCATGAAGCACCATTCTCGCAGCCTGAGAGGTCACTTGTATTGTTTAAATCATTTCTGGAGGGCCGACCGCTACCAGAAGCATTCTGA

Protein Analysis

462

Amino Acids

51.93

Weight (kDa)

5.72

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 37 - 454 9.3e-127 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1225
AciI CCGC 2 cut(s) 414, 1367
AclWI GGATC 1 cut(s) 657
AcsI RAATTY 2 cut(s) 488, 821
AcuI CTGAAG 2 cut(s) 219, 705
AfaI GTAC 2 cut(s) 12, 707
AfiI CCNNNNNNNGG 4 cut(s) 109, 125, 126, 1148
AgeI ACCGGT 1 cut(s) 1148
AgsI TTSAA 9 cut(s) 212, 222, 405, 583, 601, 655, 660, 702, 738
AhdI GACNNNNNGTC 1 cut(s) 1152
AjnI CCWGG 1 cut(s) 449
AloI GAACNNNNNNTCC 2 cut(s) 558, 590
AluBI AGCT 8 cut(s) 62, 179, 203, 218, 513, 534, 559, 1042
AluI AGCT 8 cut(s) 62, 179, 203, 218, 513, 534, 559, 1042
Alw21I GWGCWC 1 cut(s) 181
Alw26I GTCTC 3 cut(s) 83, 368, 684
AlwI GGATC 1 cut(s) 657
AoxI GGCC 4 cut(s) 251, 296, 305, 1360
ApaI GGGCCC 1 cut(s) 255
ApeKI GCWGC 4 cut(s) 1020, 1042, 1231, 1318
ApoI RAATTY 2 cut(s) 488, 821
ArsI GACNNNNNNTTYG 2 cut(s) 825, 857
AsiGI ACCGGT 1 cut(s) 1148
AspS9I GGNCC 4 cut(s) 251, 252, 296, 1360
AsuC2I CCSGG 3 cut(s) 103, 111, 255
AsuHPI GGTGA 2 cut(s) 765, 802
AsuNHI GCTAGC 1 cut(s) 559
BaeGI GKGCMC 1 cut(s) 255
BanII GRGCYC 2 cut(s) 181, 255
Bbv12I GWGCWC 1 cut(s) 181
BbvI GCAGC 4 cut(s) 1029, 1032, 1243, 1330
BcgI CGANNNNNNTGC 2 cut(s) 1296, 1330
BciT130I CCWGG 1 cut(s) 451
BcnI CCSGG 3 cut(s) 103, 111, 255
BcoDI GTCTC 3 cut(s) 83, 368, 684
BfaI CTAG 4 cut(s) 84, 309, 560, 635
BfuAI ACCTGC 1 cut(s) 1225
BglI GCCNNNNNGGC 1 cut(s) 304
BisI GCNGC 4 cut(s) 1021, 1043, 1232, 1319
BlsI GCNGC 4 cut(s) 1022, 1044, 1233, 1320
Bme1390I CCNGG 4 cut(s) 103, 111, 255, 451
BmeRI GACNNNNNGTC 1 cut(s) 1152
BmgT120I GGNCC 4 cut(s) 251, 252, 296, 1360
BmiI GGNNCC 2 cut(s) 131, 253
BmrFI CCNGG 4 cut(s) 103, 111, 255, 451
BmsI GCATC 1 cut(s) 1304
BmtI GCTAGC 1 cut(s) 563
BpmI CTGGAG 1 cut(s) 1376
BpuEI CTTGAG 1 cut(s) 1236
BpuMI CCSGG 3 cut(s) 103, 111, 255
BsaBI GATNNNNATC 1 cut(s) 691
BsaI GGTCTC 1 cut(s) 684
BsaJI CCNNGG 3 cut(s) 14, 450, 786
BsaWI WCCGGW 1 cut(s) 1148
BsaXI ACNNNNNCTCC 2 cut(s) 558, 588
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 125, 126, 1148
Bse118I RCCGGY 1 cut(s) 1148
Bse1I ACTGG 2 cut(s) 629, 816
Bse3DI GCAATG 3 cut(s) 24, 36, 1030
Bse8I GATNNNNATC 1 cut(s) 691
BseBI CCWGG 1 cut(s) 451
BseDI CCNNGG 3 cut(s) 14, 450, 786
BseGI GGATG 1 cut(s) 970
BseJI GATNNNNATC 1 cut(s) 691
BseLI CCNNNNNNNGG 4 cut(s) 109, 125, 126, 1148
BseMI GCAATG 3 cut(s) 24, 36, 1030
BseMII CTCAG 3 cut(s) 900, 904, 1314
BseNI ACTGG 2 cut(s) 629, 816
BseRI GAGGAG 1 cut(s) 1305
BseSI GKGCMC 1 cut(s) 255
BseXI GCAGC 4 cut(s) 1029, 1032, 1243, 1330
BseYI CCCAGC 2 cut(s) 555, 897
BsgI GTGCAG 1 cut(s) 989
Bsh1285I CGRYCG 1 cut(s) 1367
BshFI GGCC 4 cut(s) 253, 298, 307, 1362
BshTI ACCGGT 1 cut(s) 1148
BsiEI CGRYCG 1 cut(s) 1367
BsiHKAI GWGCWC 1 cut(s) 181
BsiSI CCGG 4 cut(s) 103, 110, 255, 1149
BslFI GGGAC 2 cut(s) 467, 879
BslI CCNNNNNNNGG 4 cut(s) 109, 125, 126, 1148
BsmAI GTCTC 3 cut(s) 83, 368, 684
BsmFI GGGAC 2 cut(s) 467, 879
BsmI GAATGC 1 cut(s) 1379
BsnI GGCC 4 cut(s) 253, 298, 307, 1362
Bso31I GGTCTC 1 cut(s) 684
Bsp120I GGGCCC 1 cut(s) 251
Bsp1286I GDGCHC 2 cut(s) 181, 255
Bsp143I GATC 1 cut(s) 662
Bsp19I CCATGG 1 cut(s) 14
BspACI CCGC 2 cut(s) 414, 1367
BspANI GGCC 4 cut(s) 253, 298, 307, 1362
BspCNI CTCAG 3 cut(s) 901, 903, 1315
BspLI GGNNCC 2 cut(s) 131, 253
BspMI ACCTGC 1 cut(s) 1225
BspOI GCTAGC 1 cut(s) 563
BspPI GGATC 1 cut(s) 657
BspTNI GGTCTC 1 cut(s) 684
BsrDI GCAATG 3 cut(s) 24, 36, 1030
BsrFI RCCGGY 1 cut(s) 1148
BsrI ACTGG 2 cut(s) 629, 816
BssAI RCCGGY 1 cut(s) 1148
BssECI CCNNGG 3 cut(s) 14, 450, 786
BssMI GATC 1 cut(s) 662
BssT1I CCWWGG 2 cut(s) 14, 786
Bst2UI CCWGG 1 cut(s) 451
Bst4CI ACNGT 4 cut(s) 157, 943, 1118, 1204
BstAPI GCANNNNNTGC 1 cut(s) 983
BstC8I GCNNGC 2 cut(s) 561, 988
BstDEI CTNAG 3 cut(s) 890, 909, 1323
BstDSI CCRYGG 1 cut(s) 14
BstF5I GGATG 1 cut(s) 970
BstKTI GATC 1 cut(s) 665
BstMAI GTCTC 3 cut(s) 83, 368, 684
BstMBI GATC 1 cut(s) 662
BstMCI CGRYCG 1 cut(s) 1367
BstMWI GCNNNNNNNGC 3 cut(s) 304, 967, 983
BstNI CCWGG 1 cut(s) 451
BstNSI RCATGY 1 cut(s) 364
BstSCI CCNGG 4 cut(s) 101, 109, 253, 449
BstSLI GKGCMC 1 cut(s) 255
BstV1I GCAGC 4 cut(s) 1029, 1032, 1243, 1330
BstX2I RGATCY 1 cut(s) 662
BstXI CCANNNNNNTGG 1 cut(s) 31
BstYI RGATCY 1 cut(s) 662
BsuRI GGCC 4 cut(s) 253, 298, 307, 1362
BtgI CCRYGG 1 cut(s) 14
BtgZI GCGATG 1 cut(s) 1281
BtsCI GGATG 1 cut(s) 970
BtsIMutI CAGTG 1 cut(s) 1123
BveI ACCTGC 1 cut(s) 1225
Cac8I GCNNGC 2 cut(s) 561, 988
Cfr10I RCCGGY 1 cut(s) 1148
Cfr13I GGNCC 4 cut(s) 251, 252, 296, 1360
Csp6I GTAC 2 cut(s) 11, 706
CspAI ACCGGT 1 cut(s) 1148
CviAII CATG 7 cut(s) 15, 361, 571, 683, 983, 1169, 1301
CviQI GTAC 2 cut(s) 11, 706
DdeI CTNAG 3 cut(s) 890, 909, 1323
DpnI GATC 1 cut(s) 664
DpnII GATC 1 cut(s) 662
DraI TTTAAA 3 cut(s) 606, 954, 1345
DriI GACNNNNNGTC 1 cut(s) 1152
Eam1105I GACNNNNNGTC 1 cut(s) 1152
Ecl136II GAGCTC 1 cut(s) 179
Eco130I CCWWGG 2 cut(s) 14, 786
Eco147I AGGCCT 1 cut(s) 307
Eco24I GRGCYC 2 cut(s) 181, 255
Eco31I GGTCTC 1 cut(s) 684
Eco32I GATATC 1 cut(s) 693
Eco53kI GAGCTC 1 cut(s) 179
Eco57I CTGAAG 2 cut(s) 219, 705
EcoICRI GAGCTC 1 cut(s) 179
EcoO109I RGGNCCY 1 cut(s) 251
EcoRII CCWGG 1 cut(s) 449
EcoRV GATATC 1 cut(s) 693
EcoT14I CCWWGG 2 cut(s) 14, 786
EcoT38I GRGCYC 2 cut(s) 181, 255
ErhI CCWWGG 2 cut(s) 14, 786
FaeI CATG 7 cut(s) 18, 364, 574, 686, 986, 1172, 1304
FaqI GGGAC 2 cut(s) 467, 879
FatI CATG 7 cut(s) 14, 360, 570, 682, 982, 1168, 1300
Fnu4HI GCNGC 4 cut(s) 1021, 1043, 1232, 1319
FokI GGATG 1 cut(s) 977
FriOI GRGCYC 2 cut(s) 181, 255
Fsp4HI GCNGC 4 cut(s) 1021, 1043, 1232, 1319
FspBI CTAG 4 cut(s) 84, 309, 560, 635
GluI GCNGC 4 cut(s) 1021, 1043, 1232, 1319
GsaI CCCAGC 2 cut(s) 559, 901
GsuI CTGGAG 1 cut(s) 1376
HaeIII GGCC 4 cut(s) 253, 298, 307, 1362
HapII CCGG 4 cut(s) 103, 110, 255, 1149
Hin1II CATG 7 cut(s) 18, 364, 574, 686, 986, 1172, 1304
HincII GTYRAC 2 cut(s) 116, 829
HindII GTYRAC 2 cut(s) 116, 829
HindIII AAGCTT 2 cut(s) 60, 511
HinfI GANTC 7 cut(s) 425, 698, 796, 911, 1130, 1215, 1249
HpaII CCGG 4 cut(s) 103, 110, 255, 1149
HphI GGTGA 2 cut(s) 765, 802
Hpy166II GTNNAC 6 cut(s) 116, 717, 829, 946, 1114, 1248
Hpy188I TCNGA 6 cut(s) 289, 462, 667, 697, 1005, 1385
Hpy188III TCNNGA 5 cut(s) 84, 660, 738, 848, 1355
Hpy8I GTNNAC 6 cut(s) 116, 717, 829, 946, 1114, 1248
HpyAV CCTTC 2 cut(s) 967, 1285
HpyCH4III ACNGT 4 cut(s) 157, 943, 1118, 1204
HpyCH4IV ACGT 1 cut(s) 704
HpyCH4V TGCA 4 cut(s) 29, 970, 1020, 1178
HpyF10VI GCNNNNNNNGC 3 cut(s) 304, 967, 983
HpyF3I CTNAG 3 cut(s) 890, 909, 1323
HpySE526I ACGT 1 cut(s) 704
Hsp92II CATG 7 cut(s) 18, 364, 574, 686, 986, 1172, 1304
Kzo9I GATC 1 cut(s) 662
LmnI GCTCC 3 cut(s) 278, 579, 1292
Lsp1109I GCAGC 4 cut(s) 1029, 1032, 1243, 1330
LweI GCATC 1 cut(s) 1304
MaeI CTAG 4 cut(s) 84, 309, 560, 635
MaeII ACGT 1 cut(s) 704
MaeIII GTNAC 5 cut(s) 151, 728, 841, 904, 1329
MalI GATC 1 cut(s) 664
MboI GATC 1 cut(s) 662
MboII GAAGA 2 cut(s) 255, 944
MfeI CAATTG 2 cut(s) 381, 1071
MflI RGATCY 1 cut(s) 662
MhlI GDGCHC 2 cut(s) 181, 255
MlyI GAGTC 5 cut(s) 434, 805, 920, 1224, 1243
MmeI TCCRAC 3 cut(s) 157, 256, 323
MseI TTAA 4 cut(s) 605, 953, 1089, 1344
MslI CAYNNNNRTG 1 cut(s) 29
MspI CCGG 4 cut(s) 103, 110, 255, 1149
MspR9I CCNGG 4 cut(s) 103, 111, 255, 451
MunI CAATTG 2 cut(s) 381, 1071
Mva1269I GAATGC 1 cut(s) 1379
MvaI CCWGG 1 cut(s) 451
MwoI GCNNNNNNNGC 3 cut(s) 304, 967, 983
NciI CCSGG 3 cut(s) 103, 111, 255
NcoI CCATGG 1 cut(s) 14
NdeII GATC 1 cut(s) 662
NheI GCTAGC 1 cut(s) 559
NlaIII CATG 7 cut(s) 18, 364, 574, 686, 986, 1172, 1304
NlaIV GGNNCC 2 cut(s) 131, 253
NmuCI GTSAC 2 cut(s) 841, 1329
NspI RCATGY 1 cut(s) 364
PceI AGGCCT 1 cut(s) 307
PctI GAATGC 1 cut(s) 1379
PfeI GAWTC 2 cut(s) 698, 1130
PinAI ACCGGT 1 cut(s) 1148
PkrI GCNGC 4 cut(s) 1022, 1044, 1233, 1320
PleI GAGTC 5 cut(s) 433, 804, 919, 1223, 1243
PpsI GAGTC 5 cut(s) 433, 804, 919, 1223, 1243
Psp124BI GAGCTC 1 cut(s) 181
Psp6I CCWGG 1 cut(s) 449
PspFI CCCAGC 2 cut(s) 555, 897
PspGI CCWGG 1 cut(s) 449
PspN4I GGNNCC 2 cut(s) 131, 253
PspOMI GGGCCC 1 cut(s) 251
PspPI GGNCC 4 cut(s) 251, 252, 296, 1360
PsrI GAACNNNNNNTAC 2 cut(s) 698, 730
PsuI RGATCY 1 cut(s) 662
RsaI GTAC 2 cut(s) 12, 707
RsaNI GTAC 2 cut(s) 11, 706
RseI CAYNNNNRTG 1 cut(s) 29
SacI GAGCTC 1 cut(s) 181
SaqAI TTAA 4 cut(s) 605, 953, 1089, 1344
SatI GCNGC 4 cut(s) 1021, 1043, 1232, 1319
Sau3AI GATC 1 cut(s) 662
Sau96I GGNCC 4 cut(s) 251, 252, 296, 1360
SchI GAGTC 5 cut(s) 434, 805, 920, 1224, 1243
ScrFI CCNGG 4 cut(s) 103, 111, 255, 451
SduI GDGCHC 2 cut(s) 181, 255
SfaNI GCATC 1 cut(s) 1304
SfiI GGCCNNNNNGGCC 1 cut(s) 304
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 1 cut(s) 1251
SmoI CTYRAG 1 cut(s) 1251
SseBI AGGCCT 1 cut(s) 307
SsiI CCGC 2 cut(s) 414, 1367
SspI AATATT 1 cut(s) 755
SspMI CTAG 4 cut(s) 84, 309, 560, 635
SstI GAGCTC 1 cut(s) 181
StuI AGGCCT 1 cut(s) 307
StyD4I CCNGG 4 cut(s) 101, 109, 253, 449
StyI CCWWGG 2 cut(s) 14, 786
TaaI ACNGT 4 cut(s) 157, 943, 1118, 1204
TaiI ACGT 1 cut(s) 707
TaqI TCGA 1 cut(s) 1156
TfiI GAWTC 2 cut(s) 698, 1130
Tru1I TTAA 4 cut(s) 605, 953, 1089, 1344
Tru9I TTAA 4 cut(s) 605, 953, 1089, 1344
TscAI CASTG 1 cut(s) 1123
TseFI GTSAC 2 cut(s) 841, 1329
TseI GCWGC 4 cut(s) 1020, 1042, 1231, 1318
Tsp45I GTSAC 2 cut(s) 841, 1329
TspDTI ATGAA 4 cut(s) 951, 971, 1157, 1317
TspRI CASTG 1 cut(s) 1123
XapI RAATTY 2 cut(s) 488, 821
XbaI TCTAGA 1 cut(s) 83
XceI RCATGY 1 cut(s) 364
XspI CTAG 4 cut(s) 84, 309, 560, 635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.