Prupe.7G030500_v2.0.a1

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0001027
Physical Location & Seq
Forward (+)
5641910 .. 5648345
6436 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G030500.2

Sequence Viewer

Length: 1578 bp
ATGCAACCTCGACAATGGATTAGCGTCACCACGATCTGTGCAGCTCTCATCCAAGCATGTTTAACAGCAAACTCGCTCCCAGAGGCTGATAAAAATACCAGTTTGCCACGTCAACCACAGACCAATTTCCAACAATATGCAGGATATATAACTGTGGATGAAAAGCAACAGAGATCGCTTTTCTACTACTTTGTTGAAGCAGAAACTGATCCTGCTTCAAAGCCTCTTGTTCTTTGGTTTAATGGAGCATTTTTAATAGCAAACTCCCTCCCAGAAGCTGATAAAATCACCAGTTTGCCAGGTCAGCCACAAGTGAGTTTCCAGCAATATGCAGGATATGTAACTGTGGACGAAAAGCAACAAAGGGCACTCTTCTACTACTTTGTTGAAGCAGAAACTGATGCTGCTTCAAAGCCTCTTGTTCTTTGGCTAAATGGAGGGCCTGGCTGTTCATCTGTTGGAGCTGGAGCCTTCATTGAGCATGGACCTTTTAAACCAAGTGGGGACATTCTGCTCAAGAATGATTTTAGTTGGAACAAAGAAGCAAATATGCTCTACTTGGAGTCACCTGCAGGAGTTGGCTTCTCCTACTCTTCAAACCAATCATTCTATGATTTTGTGAATGATGCTATAACAGCAAATGATAATTTCGTGTTCCTTGAGCGCTGGTTTGACAAATTCCCAGAGTTCAAGAACAGGGATTTCTTCATCACAGGAGAGAGCTATGGAGGCCACTATGTTCCAGAGCTTGCACGTCTGGTTGTCCAATCGAAACTGAATTTCAATCTCAAGGGCATAGCAATAGGCAACCCCCTTCTTGACTTCAACACTGATTTCAACTCAGGGGCAGAGTACTACTGGTCACATGGATTAATATCAGATGCCACCTTTGAAAGTTTCACCTCTGTCTGCAACTATTCACAAATGCTTAGGCAGATAATTAATACCGGTAAACTTAGCCCTGCTTGTGCTGCAGTATATAACCAAGTTCAAACAGAAATCAGTAACTTTATCGATCTGTACGACGTTACTCTTAACGTCTGTTTATCCTCCGATGCTGCTCAATCTCGGAAGCTCACTCAATTGCAAGAAACAGAGAAGATAGATGTCTGTCTTGAAGATGAAACAAGTAAATACTTAAACCGGCAAGATGTACAGGAGGCACTTCACGCTCGGCTTATTGGAGTCTCGAATTGGACCATTTGCAGCGATGTCGTCAGGTATAATCGGCAAAGCATGGAAATATTAATGCTTCCTGTTTTGGGTTACCTTTCCCGGTTTGGAATCCGGATTTTTGTTTACAGTGGAGATCAGGATTCTGTTATTCCACTAACTGGGACACGGACAGCGGTGGATGGATTGGCAGAGGTCTTGGAACTGAATACAACTGTGCCTTACAGAGTCTGGTTTGAAGAAAAACAGGTTGCTGGATGGACACAAGTATATGGTGATGTTCTATCGTTTGCCACCATAAGAGGAGCAGGTCATACAGCTCCATATACACAGCCAGAGAGATCACTGCTTCTATTTAGTTCATTTGTGGGAGGAAAGCCACTGCCAGAAGCACTCACTCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

526

Amino Acids

58.8

Weight (kDa)

4.8

Isoelectric Point (pI)

37.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 577
Acc36I ACCTGC 2 cut(s) 577, 1472
AccB7I CCANNNNNTGG 1 cut(s) 1334
AccIII TCCGGA 1 cut(s) 1287
AciI CCGC 1 cut(s) 1349
AclWI GGATC 1 cut(s) 203
AcsI RAATTY 2 cut(s) 677, 778
AfaI GTAC 3 cut(s) 854, 1022, 1155
AfeI AGCGCT 1 cut(s) 665
AfiI CCNNNNNNNGG 2 cut(s) 1262, 1334
AgeI ACCGGT 1 cut(s) 947
AjiI CACGTC 2 cut(s) 110, 755
AjnI CCWGG 2 cut(s) 298, 442
AluBI AGCT 7 cut(s) 44, 278, 464, 723, 748, 1075, 1493
AluI AGCT 7 cut(s) 44, 278, 464, 723, 748, 1075, 1493
Alw26I GTCTC 1 cut(s) 1192
AlwI GGATC 1 cut(s) 203
AlwNI CAGNNNCTG 5 cut(s) 86, 206, 278, 398, 1404
Aor13HI TCCGGA 1 cut(s) 1287
Aor51HI AGCGCT 1 cut(s) 665
AoxI GGCC 2 cut(s) 440, 730
ApeKI GCWGC 5 cut(s) 41, 404, 971, 1058, 1206
ApoI RAATTY 2 cut(s) 677, 778
AseI ATTAAT 3 cut(s) 872, 942, 1247
AsiGI ACCGGT 1 cut(s) 947
AspLEI GCGC 1 cut(s) 666
AspS9I GGNCC 3 cut(s) 440, 485, 1197
AsuC2I CCSGG 1 cut(s) 1276
AsuHPI GGTGA 5 cut(s) 19, 280, 558, 892, 1460
AvaII GGWCC 2 cut(s) 485, 1197
BaeGI GKGCMC 1 cut(s) 370
BbvI GCAGC 5 cut(s) 53, 391, 958, 1045, 1218
BccI CCATC 2 cut(s) 1349, 1425
BcgI CGANNNNNNTGC 2 cut(s) 1195, 1229
BciT130I CCWGG 2 cut(s) 300, 444
BcnI CCSGG 1 cut(s) 1276
BcoDI GTCTC 1 cut(s) 1192
BfmI CTRYAG 2 cut(s) 570, 972
BfoI RGCGCY 1 cut(s) 667
BfuAI ACCTGC 2 cut(s) 577, 1472
BisI GCNGC 5 cut(s) 42, 405, 972, 1059, 1207
BlsI GCNGC 5 cut(s) 43, 406, 973, 1060, 1208
BmcAI AGTACT 1 cut(s) 854
Bme1390I CCNGG 3 cut(s) 300, 444, 1276
Bme18I GGWCC 2 cut(s) 485, 1197
BmgBI CACGTC 2 cut(s) 110, 755
BmgT120I GGNCC 3 cut(s) 440, 485, 1197
BmiI GGNNCC 1 cut(s) 469
BmrFI CCNGG 3 cut(s) 300, 444, 1276
BmrI ACTGGG 1 cut(s) 1344
BmsI GCATC 4 cut(s) 391, 616, 871, 1045
BmuI ACTGGG 1 cut(s) 1344
BpmI CTGGAG 1 cut(s) 486
Bpu10I CCTNAGC 1 cut(s) 929
BpuEI CTTGAG 3 cut(s) 500, 680, 773
BpuMI CCSGG 1 cut(s) 1276
Bsa29I ATCGAT 1 cut(s) 1014
BsaBI GATNNNNATC 1 cut(s) 874
BsaWI WCCGGW 2 cut(s) 947, 1287
Bsc4I CCNNNNNNNGG 2 cut(s) 1262, 1334
Bse118I RCCGGY 2 cut(s) 947, 1143
Bse1I ACTGG 4 cut(s) 99, 291, 863, 1339
Bse8I GATNNNNATC 1 cut(s) 874
BseAI TCCGGA 1 cut(s) 1287
BseBI CCWGG 2 cut(s) 300, 444
BseCI ATCGAT 1 cut(s) 1014
BseGI GGATG 4 cut(s) 48, 163, 1360, 1436
BseJI GATNNNNATC 1 cut(s) 874
BseLI CCNNNNNNNGG 2 cut(s) 1262, 1334
BseMII CTCAG 1 cut(s) 855
BseNI ACTGG 4 cut(s) 99, 291, 863, 1339
BseRI GAGGAG 1 cut(s) 1491
BseSI GKGCMC 1 cut(s) 370
BseXI GCAGC 5 cut(s) 53, 391, 958, 1045, 1218
BsgI GTGCAG 1 cut(s) 60
BshFI GGCC 2 cut(s) 442, 732
BshTI ACCGGT 1 cut(s) 947
BshVI ATCGAT 1 cut(s) 1014
BsiSI CCGG 4 cut(s) 948, 1144, 1276, 1288
BslFI GGGAC 2 cut(s) 518, 1351
BslI CCNNNNNNNGG 2 cut(s) 1262, 1334
BsmAI GTCTC 1 cut(s) 1192
BsmFI GGGAC 2 cut(s) 518, 1351
BsnI GGCC 2 cut(s) 442, 732
Bsp1286I GDGCHC 1 cut(s) 370
Bsp13I TCCGGA 1 cut(s) 1287
Bsp1407I TGTACA 1 cut(s) 1153
Bsp143I GATC 6 cut(s) 33, 173, 208, 1015, 1309, 1514
BspACI CCGC 1 cut(s) 1349
BspANI GGCC 2 cut(s) 442, 732
BspCNI CTCAG 1 cut(s) 854
BspDI ATCGAT 1 cut(s) 1014
BspEI TCCGGA 1 cut(s) 1287
BspLI GGNNCC 1 cut(s) 469
BspMAI CTGCAG 2 cut(s) 574, 976
BspMI ACCTGC 2 cut(s) 577, 1472
BspPI GGATC 1 cut(s) 203
BsrFI RCCGGY 2 cut(s) 947, 1143
BsrGI TGTACA 1 cut(s) 1153
BsrI ACTGG 4 cut(s) 99, 291, 863, 1339
BssAI RCCGGY 2 cut(s) 947, 1143
BssMI GATC 6 cut(s) 33, 173, 208, 1015, 1309, 1514
Bst2UI CCWGG 2 cut(s) 300, 444
Bst4CI ACNGT 4 cut(s) 154, 346, 1304, 1390
Bst6I CTCTTC 2 cut(s) 377, 598
BstAUI TGTACA 1 cut(s) 1153
BstC8I GCNNGC 1 cut(s) 750
BstDEI CTNAG 3 cut(s) 841, 929, 956
BstEII GGTNACC 1 cut(s) 1265
BstF5I GGATG 4 cut(s) 48, 163, 1360, 1436
BstH2I RGCGCY 1 cut(s) 667
BstHHI GCGC 1 cut(s) 666
BstKTI GATC 6 cut(s) 36, 176, 211, 1018, 1312, 1517
BstMAI GTCTC 1 cut(s) 1192
BstMBI GATC 6 cut(s) 33, 173, 208, 1015, 1309, 1514
BstMWI GCNNNNNNNGC 5 cut(s) 304, 635, 729, 971, 1169
BstNI CCWGG 2 cut(s) 300, 444
BstNSI RCATGY 1 cut(s) 60
BstPI GGTNACC 1 cut(s) 1265
BstSCI CCNGG 3 cut(s) 298, 442, 1274
BstSFI CTRYAG 2 cut(s) 570, 972
BstSLI GKGCMC 1 cut(s) 370
BstV1I GCAGC 5 cut(s) 53, 391, 958, 1045, 1218
Bsu15I ATCGAT 1 cut(s) 1014
BsuRI GGCC 2 cut(s) 442, 732
BsuTUI ATCGAT 1 cut(s) 1014
BtgZI GCGATG 1 cut(s) 1224
BtrI CACGTC 2 cut(s) 110, 755
BtsCI GGATG 4 cut(s) 48, 163, 1360, 1436
BtsI GCAGTG 2 cut(s) 1517, 1553
BtsIMutI CAGTG 5 cut(s) 828, 1309, 1517, 1553, 1573
BveI ACCTGC 2 cut(s) 577, 1472
Cac8I GCNNGC 1 cut(s) 750
CaiI CAGNNNCTG 5 cut(s) 86, 206, 278, 398, 1404
CfoI GCGC 1 cut(s) 666
Cfr10I RCCGGY 2 cut(s) 947, 1143
Cfr13I GGNCC 3 cut(s) 440, 485, 1197
ClaI ATCGAT 1 cut(s) 1014
CseI GACGC 1 cut(s) 13
Csp6I GTAC 3 cut(s) 853, 1021, 1154
CspAI ACCGGT 1 cut(s) 947
CviAII CATG 4 cut(s) 57, 482, 866, 1237
CviQI GTAC 3 cut(s) 853, 1021, 1154
DdeI CTNAG 3 cut(s) 841, 929, 956
DpnI GATC 6 cut(s) 35, 175, 210, 1017, 1311, 1516
DpnII GATC 6 cut(s) 33, 173, 208, 1015, 1309, 1514
DraI TTTAAA 1 cut(s) 493
Eam1104I CTCTTC 2 cut(s) 377, 598
EarI CTCTTC 2 cut(s) 377, 598
Eco47I GGWCC 2 cut(s) 485, 1197
Eco47III AGCGCT 1 cut(s) 665
Eco91I GGTNACC 1 cut(s) 1265
EcoO109I RGGNCCY 1 cut(s) 440
EcoO65I GGTNACC 1 cut(s) 1265
EcoRII CCWGG 2 cut(s) 298, 442
FaeI CATG 4 cut(s) 60, 485, 869, 1240
FaqI GGGAC 2 cut(s) 518, 1351
FatI CATG 4 cut(s) 56, 481, 865, 1236
Fnu4HI GCNGC 5 cut(s) 42, 405, 972, 1059, 1207
FokI GGATG 4 cut(s) 35, 170, 1367, 1443
Fsp4HI GCNGC 5 cut(s) 42, 405, 972, 1059, 1207
GlaI GCGC 1 cut(s) 665
GluI GCNGC 5 cut(s) 42, 405, 972, 1059, 1207
GsuI CTGGAG 1 cut(s) 486
HaeII RGCGCY 1 cut(s) 667
HaeIII GGCC 2 cut(s) 442, 732
HapII CCGG 4 cut(s) 948, 1144, 1276, 1288
HgaI GACGC 1 cut(s) 13
HhaI GCGC 1 cut(s) 666
Hin1II CATG 4 cut(s) 60, 485, 869, 1240
Hin6I GCGC 1 cut(s) 664
HinP1I GCGC 1 cut(s) 664
HincII GTYRAC 1 cut(s) 113
HindII GTYRAC 1 cut(s) 113
HinfI GANTC 5 cut(s) 563, 1185, 1284, 1316, 1401
HpaII CCGG 4 cut(s) 948, 1144, 1276, 1288
HphI GGTGA 5 cut(s) 19, 280, 558, 892, 1460
Hpy166II GTNNAC 4 cut(s) 113, 349, 953, 1300
Hpy188I TCNGA 3 cut(s) 880, 1054, 1071
Hpy188III TCNNGA 8 cut(s) 517, 691, 743, 818, 1115, 1189, 1288, 1313
Hpy8I GTNNAC 4 cut(s) 113, 349, 953, 1300
Hpy99I CGWCG 1 cut(s) 1028
HpyAV CCTTC 2 cut(s) 481, 824
HpyCH4III ACNGT 4 cut(s) 154, 346, 1304, 1390
HpyCH4IV ACGT 4 cut(s) 109, 754, 1026, 1038
HpyF10VI GCNNNNNNNGC 5 cut(s) 304, 635, 729, 971, 1169
HpyF3I CTNAG 3 cut(s) 841, 929, 956
HpySE526I ACGT 4 cut(s) 109, 754, 1026, 1038
Hsp92II CATG 4 cut(s) 60, 485, 869, 1240
HspAI GCGC 1 cut(s) 664
Kpn2I TCCGGA 1 cut(s) 1287
Kzo9I GATC 6 cut(s) 33, 173, 208, 1015, 1309, 1514
LmnI GCTCC 6 cut(s) 81, 245, 461, 467, 1478, 1498
Lsp1109I GCAGC 5 cut(s) 53, 391, 958, 1045, 1218
LweI GCATC 4 cut(s) 391, 616, 871, 1045
MaeII ACGT 4 cut(s) 109, 754, 1026, 1038
MaeIII GTNAC 7 cut(s) 25, 340, 564, 861, 1004, 1027, 1265
MalI GATC 6 cut(s) 35, 175, 210, 1017, 1311, 1516
MboI GATC 6 cut(s) 33, 173, 208, 1015, 1309, 1514
MboII GAAGA 6 cut(s) 364, 585, 697, 1111, 1130, 1424
MfeI CAATTG 1 cut(s) 1082
MhlI GDGCHC 1 cut(s) 370
MluCI AATT 7 cut(s) 124, 646, 677, 778, 939, 1082, 1192
MlyI GAGTC 3 cut(s) 572, 1194, 1410
MmeI TCCRAC 3 cut(s) 154, 439, 512
MroI TCCGGA 1 cut(s) 1287
MseI TTAA 9 cut(s) 62, 240, 254, 492, 872, 942, 1035, 1139, 1247
MspA1I CMGCKG 1 cut(s) 1349
MspI CCGG 4 cut(s) 948, 1144, 1276, 1288
MspR9I CCNGG 3 cut(s) 300, 444, 1276
MunI CAATTG 1 cut(s) 1082
MvaI CCWGG 2 cut(s) 300, 444
MwoI GCNNNNNNNGC 5 cut(s) 304, 635, 729, 971, 1169
NciI CCSGG 1 cut(s) 1276
NdeII GATC 6 cut(s) 33, 173, 208, 1015, 1309, 1514
NlaIII CATG 4 cut(s) 60, 485, 869, 1240
NlaIV GGNNCC 1 cut(s) 469
NmeAIII GCCGAG 1 cut(s) 1153
NmuCI GTSAC 3 cut(s) 25, 564, 861
NspI RCATGY 1 cut(s) 60
PaqCI CACCTGC 1 cut(s) 577
PcsI WCGNNNNNNNCGW 1 cut(s) 1020
PfeI GAWTC 2 cut(s) 1284, 1316
PflMI CCANNNNNTGG 1 cut(s) 1334
PinAI ACCGGT 1 cut(s) 947
PkrI GCNGC 5 cut(s) 43, 406, 973, 1060, 1208
PleI GAGTC 3 cut(s) 571, 1193, 1409
PpsI GAGTC 3 cut(s) 571, 1193, 1409
PshBI ATTAAT 3 cut(s) 872, 942, 1247
Psp6I CCWGG 2 cut(s) 298, 442
PspEI GGTNACC 1 cut(s) 1265
PspGI CCWGG 2 cut(s) 298, 442
PspN4I GGNNCC 1 cut(s) 469
PspPI GGNCC 3 cut(s) 440, 485, 1197
PstI CTGCAG 2 cut(s) 574, 976
PstNI CAGNNNCTG 5 cut(s) 86, 206, 278, 398, 1404
RsaI GTAC 3 cut(s) 854, 1022, 1155
RsaNI GTAC 3 cut(s) 853, 1021, 1154
SaqAI TTAA 9 cut(s) 62, 240, 254, 492, 872, 942, 1035, 1139, 1247
SatI GCNGC 5 cut(s) 42, 405, 972, 1059, 1207
Sau3AI GATC 6 cut(s) 33, 173, 208, 1015, 1309, 1514
Sau96I GGNCC 3 cut(s) 440, 485, 1197
SbfI CCTGCAGG 1 cut(s) 574
ScaI AGTACT 1 cut(s) 854
SchI GAGTC 3 cut(s) 572, 1194, 1410
ScrFI CCNGG 3 cut(s) 300, 444, 1276
SdaI CCTGCAGG 1 cut(s) 574
SduI GDGCHC 1 cut(s) 370
SfaNI GCATC 4 cut(s) 391, 616, 871, 1045
SfcI CTRYAG 2 cut(s) 570, 972
SinI GGWCC 2 cut(s) 485, 1197
SmlI CTYRAG 3 cut(s) 515, 659, 788
SmoI CTYRAG 3 cut(s) 515, 659, 788
Sse8387I CCTGCAGG 1 cut(s) 574
Sse9I AATT 7 cut(s) 124, 646, 677, 778, 939, 1082, 1192
SsiI CCGC 1 cut(s) 1349
SspI AATATT 1 cut(s) 1245
StyD4I CCNGG 3 cut(s) 298, 442, 1274
TaaI ACNGT 4 cut(s) 154, 346, 1304, 1390
TaiI ACGT 4 cut(s) 112, 757, 1029, 1041
TaqI TCGA 4 cut(s) 10, 770, 1014, 1190
TasI AATT 7 cut(s) 124, 646, 677, 778, 939, 1082, 1192
TatI WGTACW 2 cut(s) 852, 1153
TfiI GAWTC 2 cut(s) 1284, 1316
Tru1I TTAA 9 cut(s) 62, 240, 254, 492, 872, 942, 1035, 1139, 1247
Tru9I TTAA 9 cut(s) 62, 240, 254, 492, 872, 942, 1035, 1139, 1247
TscAI CASTG 4 cut(s) 835, 1309, 1524, 1560
TseFI GTSAC 3 cut(s) 25, 564, 861
TseI GCWGC 5 cut(s) 41, 404, 971, 1058, 1206
Tsp45I GTSAC 3 cut(s) 25, 564, 861
TspDTI ATGAA 6 cut(s) 174, 441, 463, 697, 1137, 1524
TspGWI ACGGA 1 cut(s) 1357
TspRI CASTG 4 cut(s) 835, 1309, 1524, 1560
Van91I CCANNNNNTGG 1 cut(s) 1334
VpaK11BI GGWCC 2 cut(s) 485, 1197
VspI ATTAAT 3 cut(s) 872, 942, 1247
XapI RAATTY 2 cut(s) 677, 778
XceI RCATGY 1 cut(s) 60
ZrmI AGTACT 1 cut(s) 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.