pycom13g11220

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
7667488 .. 7670161
2674 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g11220.1

Sequence Viewer

Length: 1389 bp
ATGATTTCCCTACCATGGAACACCATTGTACTCACTCTAATTCTCTTCCACATAACTTCTTCCTCCATTGAAGCAGAAGCTTCTCCTTCTCTGCTCGACAGAATTACCGGGTTGCCGGGTCAGCCCCCCGTCGGGTTCCAGCAGTATTCTGGCTATGTGACCGTTGATGCGAAAAAACAGAAAGCTCTGTTTTACTATTTTGCTGAAGCAGAAATAGATCCAGCTTCCAAGCCTCTTGTCCTCTGGCTCAATGGAGGTCCTGGTTGTTCTTCCCTTGGAGTCGGAGCATTCTCTGAGAACGGACCGTTTAGGCCTAAAGGAGAAGTCTTGGTTCGAAATGAGCATAGCTGGAATAGAGAAGCAAACATGCTGTACCTGGAGACACCAATTGGAGTGGGGTTCTCTTACTCAACGGATACTTCTTTTTATGAGGCTGTAGCCGATCACATCACAGCCAGGGACAATCTTCTGTTCTTGCAAAAGTGGTTTGAAAAATTCCCGCAATACAGAAATAGAAGCTTGTATATTACTGGAGAAAGCTATGCTGGTCACTTTGTTCCTCAGCTAGCAGAACTCATGCTCCAGTTCAAGGAACATCACTTCAATTTGAAAGGAATTGCTTTGGGTAATCCAGTCCTAGAATATGCAACTGACTTCAATTCAAGAGCTGAGTTCTTCTGGTCTCATGGATTGATATCGGATTCAACTTACAAAATGTTCAGTTCCGTTTGCAACTACTCGCGGTTTGTGAGTGAATATTACAGAGGCTCAGTTTCGCCTATTTGTTCGAGGGTGATGAGCCAAGTGAGCAGAGAAACCAGTAAATTTGTTGACAAGTATGATGTCACCCTTGATGTTTGTATATCATCTGTGTTTTCCCAATCCAAAGCCCTCCTTCCTCAGCAAGTTGCTGATTCAATAGATGTGTGTGTTGAGGATGAAGTAGTTAATTATTTGAACAGGCCAGACGTGCAGAAGGCGCTTCATGCTCGTCTTGTTGGAGTTCGACAGTGGGCAGTTTGCAGCAACGTACTGGATTATCAGGTGCTGGATGTGGAGATACCAACGATCACAATCGTAGGCAAACTTATCAAAGCAGGAATACCGGTCTTAGTTTACAGCGGCGACCAAGATTCTGTTATCCCGTTGACTGGAAGTCGAACATTAGTTCATGGACTTGCAGAGCAGTTAAGACTAAACACCACTGTGCCTTATAGAGTCTGGTTTGAAGGACAACAGGTTGGTGGATGGACTCAAGTTTACGGTAATATTCTTTCTTTTGCCACCATTAGAGGAGCATCACACGAAGCGCCATTCTCGCAGCCTGAGAGATCACTCGTGCTGTTCAAGTCGTTTTTGAAGGGCCGGCCTCTGCCAGAAGTGTTCTGA

Protein Analysis

463

Amino Acids

51.74

Weight (kDa)

5.96

Isoelectric Point (pI)

36.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 39 - 455 9.1e-125 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 742
AciI CCGC 3 cut(s) 500, 742, 1122
AclWI GGATC 1 cut(s) 212
AcsI RAATTY 2 cut(s) 494, 824
AcuI CTGAAG 1 cut(s) 225
AfaI GTAC 3 cut(s) 30, 374, 1032
AfiI CCNNNNNNNGG 5 cut(s) 15, 131, 132, 589, 1151
AgeI ACCGGT 1 cut(s) 1105
AhdI GACNNNNNGTC 1 cut(s) 1155
AjiI CACGTC 1 cut(s) 970
AjnI CCWGG 3 cut(s) 259, 375, 455
AleI CACNNNNGTG 1 cut(s) 1205
AloI GAACNNNNNNTCC 2 cut(s) 564, 596
AluBI AGCT 8 cut(s) 80, 185, 224, 348, 519, 540, 565, 668
AluI AGCT 8 cut(s) 80, 185, 224, 348, 519, 540, 565, 668
Alw26I GTCTC 2 cut(s) 374, 687
AlwI GGATC 1 cut(s) 212
AlwNI CAGNNNCTG 1 cut(s) 1048
AoxI GGCC 4 cut(s) 311, 962, 1363, 1367
ApeKI GCWGC 2 cut(s) 1023, 1321
ApoI RAATTY 2 cut(s) 494, 824
AsiGI ACCGGT 1 cut(s) 1105
AspLEI GCGC 2 cut(s) 982, 1312
AspS9I GGNCC 3 cut(s) 257, 302, 1363
AsuC2I CCSGG 2 cut(s) 109, 117
AsuHPI GGTGA 2 cut(s) 805, 838
AsuII TTCGAA 1 cut(s) 334
AsuNHI GCTAGC 1 cut(s) 565
AvaII GGWCC 2 cut(s) 257, 302
BauI CACGAG 1 cut(s) 1337
BbvCI CCTCAGC 2 cut(s) 561, 900
BbvI GCAGC 2 cut(s) 1035, 1333
BccI CCATC 1 cut(s) 1242
BciT130I CCWGG 3 cut(s) 261, 377, 457
BciVI GTATCC 1 cut(s) 409
BcnI CCSGG 2 cut(s) 109, 117
BcoDI GTCTC 2 cut(s) 374, 687
BfaI CTAG 2 cut(s) 566, 638
BfmI CTRYAG 1 cut(s) 435
BfoI RGCGCY 2 cut(s) 983, 1313
BfuI GTATCC 1 cut(s) 409
BisI GCNGC 3 cut(s) 1024, 1123, 1322
BlsI GCNGC 3 cut(s) 1025, 1124, 1323
Bme1390I CCNGG 5 cut(s) 109, 117, 261, 377, 457
Bme18I GGWCC 2 cut(s) 257, 302
BmeRI GACNNNNNGTC 1 cut(s) 1155
BmgBI CACGTC 1 cut(s) 970
BmgT120I GGNCC 3 cut(s) 257, 302, 1363
BmiI GGNNCC 1 cut(s) 137
BmrFI CCNGG 5 cut(s) 109, 117, 261, 377, 457
BmsI GCATC 2 cut(s) 157, 1307
BmtI GCTAGC 1 cut(s) 569
BpmI CTGGAG 3 cut(s) 398, 552, 566
Bpu10I CCTNAGC 2 cut(s) 561, 900
Bpu14I TTCGAA 1 cut(s) 334
BpuEI CTTGAG 1 cut(s) 1239
BpuMI CCSGG 2 cut(s) 109, 117
BsaBI GATNNNNATC 2 cut(s) 694, 1073
BsaI GGTCTC 1 cut(s) 687
BsaJI CCNNGG 3 cut(s) 14, 274, 456
BsaWI WCCGGW 1 cut(s) 1105
BsaXI ACNNNNNCTCC 2 cut(s) 564, 594
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 131, 132, 589, 1151
Bse118I RCCGGY 2 cut(s) 1105, 1365
Bse1I ACTGG 6 cut(s) 535, 583, 632, 819, 1038, 1156
Bse8I GATNNNNATC 2 cut(s) 694, 1073
BseBI CCWGG 3 cut(s) 261, 377, 457
BseDI CCNNGG 3 cut(s) 14, 274, 456
BseGI GGATG 3 cut(s) 943, 1057, 1253
BseJI GATNNNNATC 2 cut(s) 694, 1073
BseLI CCNNNNNNNGG 5 cut(s) 15, 131, 132, 589, 1151
BseMII CTCAG 6 cut(s) 285, 575, 660, 783, 914, 1317
BseNI ACTGG 6 cut(s) 535, 583, 632, 819, 1038, 1156
BseRI GAGGAG 1 cut(s) 1308
BseXI GCAGC 2 cut(s) 1035, 1333
BsgI GTGCAG 1 cut(s) 992
Bsh1236I CGCG 1 cut(s) 742
BshFI GGCC 4 cut(s) 313, 964, 1365, 1369
BshTI ACCGGT 1 cut(s) 1105
BsiSI CCGG 4 cut(s) 108, 116, 1106, 1366
BslFI GGGAC 1 cut(s) 473
BslI CCNNNNNNNGG 5 cut(s) 15, 131, 132, 589, 1151
BsmAI GTCTC 2 cut(s) 374, 687
BsmFI GGGAC 1 cut(s) 473
BsmI GAATGC 1 cut(s) 287
BsnI GGCC 4 cut(s) 313, 964, 1365, 1369
Bso31I GGTCTC 1 cut(s) 687
Bsp119I TTCGAA 1 cut(s) 334
Bsp143I GATC 4 cut(s) 217, 442, 1068, 1331
Bsp19I CCATGG 1 cut(s) 14
BspACI CCGC 3 cut(s) 500, 742, 1122
BspANI GGCC 4 cut(s) 313, 964, 1365, 1369
BspCNI CTCAG 6 cut(s) 286, 574, 661, 782, 913, 1318
BspFNI CGCG 1 cut(s) 742
BspLI GGNNCC 1 cut(s) 137
BspOI GCTAGC 1 cut(s) 569
BspPI GGATC 1 cut(s) 212
BspT104I TTCGAA 1 cut(s) 334
BspTNI GGTCTC 1 cut(s) 687
BsrFI RCCGGY 2 cut(s) 1105, 1365
BsrI ACTGG 6 cut(s) 535, 583, 632, 819, 1038, 1156
BssAI RCCGGY 2 cut(s) 1105, 1365
BssECI CCNNGG 3 cut(s) 14, 274, 456
BssMI GATC 4 cut(s) 217, 442, 1068, 1331
BssSI CACGAG 1 cut(s) 1337
BssT1I CCWWGG 2 cut(s) 14, 274
Bst2BI CACGAG 1 cut(s) 1337
Bst2UI CCWGG 3 cut(s) 261, 377, 457
Bst4CI ACNGT 5 cut(s) 163, 306, 1011, 1207, 1265
Bst6I CTCTTC 1 cut(s) 50
BstBI TTCGAA 1 cut(s) 334
BstC8I GCNNGC 2 cut(s) 567, 1367
BstDEI CTNAG 7 cut(s) 294, 561, 669, 769, 900, 1111, 1326
BstDSI CCRYGG 1 cut(s) 14
BstF5I GGATG 3 cut(s) 943, 1057, 1253
BstFNI CGCG 1 cut(s) 742
BstH2I RGCGCY 2 cut(s) 983, 1313
BstHHI GCGC 2 cut(s) 982, 1312
BstKTI GATC 4 cut(s) 220, 445, 1071, 1334
BstMAI GTCTC 2 cut(s) 374, 687
BstMBI GATC 4 cut(s) 217, 442, 1068, 1331
BstMWI GCNNNNNNNGC 6 cut(s) 121, 807, 970, 979, 986, 1318
BstNI CCWGG 3 cut(s) 261, 377, 457
BstNSI RCATGY 1 cut(s) 370
BstSCI CCNGG 5 cut(s) 107, 115, 259, 375, 455
BstSFI CTRYAG 1 cut(s) 435
BstUI CGCG 1 cut(s) 742
BstV1I GCAGC 2 cut(s) 1035, 1333
BstX2I RGATCY 1 cut(s) 217
BstYI RGATCY 1 cut(s) 217
BsuI GTATCC 1 cut(s) 409
BsuRI GGCC 4 cut(s) 313, 964, 1365, 1369
BtgI CCRYGG 1 cut(s) 14
BtrI CACGTC 1 cut(s) 970
BtsCI GGATG 3 cut(s) 943, 1057, 1253
BtsIMutI CAGTG 2 cut(s) 1016, 1203
Cac8I GCNNGC 2 cut(s) 567, 1367
CaiI CAGNNNCTG 1 cut(s) 1048
CfoI GCGC 2 cut(s) 982, 1312
Cfr10I RCCGGY 2 cut(s) 1105, 1365
Cfr13I GGNCC 3 cut(s) 257, 302, 1363
CpoI CGGWCCG 1 cut(s) 302
Csp6I GTAC 3 cut(s) 29, 373, 1031
CspAI ACCGGT 1 cut(s) 1105
CspCI CAANNNNNGTGG 2 cut(s) 375, 410
CspI CGGWCCG 1 cut(s) 302
CviAII CATG 6 cut(s) 15, 367, 577, 686, 986, 1172
CviQI GTAC 3 cut(s) 29, 373, 1031
DdeI CTNAG 7 cut(s) 294, 561, 669, 769, 900, 1111, 1326
DpnI GATC 4 cut(s) 219, 444, 1070, 1333
DpnII GATC 4 cut(s) 217, 442, 1068, 1331
DriI GACNNNNNGTC 1 cut(s) 1155
Eam1104I CTCTTC 1 cut(s) 50
Eam1105I GACNNNNNGTC 1 cut(s) 1155
EarI CTCTTC 1 cut(s) 50
Eco130I CCWWGG 2 cut(s) 14, 274
Eco147I AGGCCT 1 cut(s) 313
Eco31I GGTCTC 1 cut(s) 687
Eco32I GATATC 1 cut(s) 696
Eco47I GGWCC 2 cut(s) 257, 302
Eco57I CTGAAG 1 cut(s) 225
EcoO109I RGGNCCY 1 cut(s) 257
EcoRII CCWGG 3 cut(s) 259, 375, 455
EcoRV GATATC 1 cut(s) 696
EcoT14I CCWWGG 2 cut(s) 14, 274
ErhI CCWWGG 2 cut(s) 14, 274
FaeI CATG 6 cut(s) 18, 370, 580, 689, 989, 1175
FalI AAGNNNNNCTT 2 cut(s) 879, 911
FaqI GGGAC 1 cut(s) 473
FatI CATG 6 cut(s) 14, 366, 576, 685, 985, 1171
FauI CCCGC 1 cut(s) 507
Fnu4HI GCNGC 3 cut(s) 1024, 1123, 1322
FokI GGATG 3 cut(s) 950, 1064, 1260
FseI GGCCGGCC 1 cut(s) 1369
Fsp4HI GCNGC 3 cut(s) 1024, 1123, 1322
FspBI CTAG 2 cut(s) 566, 638
GlaI GCGC 2 cut(s) 981, 1311
GluI GCNGC 3 cut(s) 1024, 1123, 1322
GsuI CTGGAG 3 cut(s) 398, 552, 566
HaeII RGCGCY 2 cut(s) 983, 1313
HaeIII GGCC 4 cut(s) 313, 964, 1365, 1369
HapII CCGG 4 cut(s) 108, 116, 1106, 1366
HhaI GCGC 2 cut(s) 982, 1312
Hin1II CATG 6 cut(s) 18, 370, 580, 689, 989, 1175
Hin6I GCGC 2 cut(s) 980, 1310
HinP1I GCGC 2 cut(s) 980, 1310
HincII GTYRAC 2 cut(s) 832, 1149
HindII GTYRAC 2 cut(s) 832, 1149
HindIII AAGCTT 2 cut(s) 78, 517
HinfI GANTC 6 cut(s) 279, 701, 914, 1133, 1218, 1252
HpaII CCGG 4 cut(s) 108, 116, 1106, 1366
HphI GGTGA 2 cut(s) 805, 838
Hpy166II GTNNAC 4 cut(s) 832, 1117, 1149, 1261
Hpy188I TCNGA 4 cut(s) 284, 295, 700, 1388
Hpy188III TCNNGA 1 cut(s) 663
Hpy8I GTNNAC 4 cut(s) 832, 1117, 1149, 1261
Hpy99I CGWCG 1 cut(s) 134
HpyAV CCTTC 5 cut(s) 96, 905, 970, 1223, 1354
HpyCH4III ACNGT 5 cut(s) 163, 306, 1011, 1207, 1265
HpyCH4IV ACGT 2 cut(s) 969, 1029
HpyCH4V TGCA 6 cut(s) 478, 647, 732, 973, 1023, 1181
HpyF10VI GCNNNNNNNGC 6 cut(s) 121, 807, 970, 979, 986, 1318
HpyF3I CTNAG 7 cut(s) 294, 561, 669, 769, 900, 1111, 1326
HpySE526I ACGT 2 cut(s) 969, 1029
Hsp92II CATG 6 cut(s) 18, 370, 580, 689, 989, 1175
HspAI GCGC 2 cut(s) 980, 1310
KroI GCCGGC 1 cut(s) 1365
KroNI GCCGGC 1 cut(s) 1367
Kzo9I GATC 4 cut(s) 217, 442, 1068, 1331
LmnI GCTCC 3 cut(s) 284, 585, 1295
Lsp1109I GCAGC 2 cut(s) 1035, 1333
LweI GCATC 2 cut(s) 157, 1307
MaeI CTAG 2 cut(s) 566, 638
MaeII ACGT 2 cut(s) 969, 1029
MaeIII GTNAC 3 cut(s) 157, 548, 844
MalI GATC 4 cut(s) 219, 444, 1070, 1333
MboI GATC 4 cut(s) 217, 442, 1068, 1331
MboII GAAGA 5 cut(s) 37, 51, 261, 458, 667
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 1 cut(s) 217
MluCI AATT 9 cut(s) 39, 102, 387, 494, 604, 615, 658, 824, 949
MlyI GAGTC 3 cut(s) 288, 1227, 1246
MmeI TCCRAC 2 cut(s) 262, 979
MroNI GCCGGC 1 cut(s) 1365
MseI TTAA 2 cut(s) 948, 1190
MslI CAYNNNNRTG 1 cut(s) 1205
MspA1I CMGCKG 1 cut(s) 1122
MspI CCGG 4 cut(s) 108, 116, 1106, 1366
MspR9I CCNGG 5 cut(s) 109, 117, 261, 377, 457
MunI CAATTG 1 cut(s) 387
Mva1269I GAATGC 1 cut(s) 287
MvaI CCWGG 3 cut(s) 261, 377, 457
MvnI CGCG 1 cut(s) 742
MwoI GCNNNNNNNGC 6 cut(s) 121, 807, 970, 979, 986, 1318
NaeI GCCGGC 1 cut(s) 1367
NciI CCSGG 2 cut(s) 109, 117
NcoI CCATGG 1 cut(s) 14
NdeII GATC 4 cut(s) 217, 442, 1068, 1331
NgoMIV GCCGGC 1 cut(s) 1365
NheI GCTAGC 1 cut(s) 565
NlaIII CATG 6 cut(s) 18, 370, 580, 689, 989, 1175
NlaIV GGNNCC 1 cut(s) 137
NmuCI GTSAC 3 cut(s) 157, 548, 844
NspI RCATGY 1 cut(s) 370
NspV TTCGAA 1 cut(s) 334
OliI CACNNNNGTG 1 cut(s) 1205
PceI AGGCCT 1 cut(s) 313
PctI GAATGC 1 cut(s) 287
PdiI GCCGGC 1 cut(s) 1367
PfeI GAWTC 3 cut(s) 701, 914, 1133
PinAI ACCGGT 1 cut(s) 1105
PkrI GCNGC 3 cut(s) 1025, 1124, 1323
PleI GAGTC 3 cut(s) 287, 1226, 1246
PpsI GAGTC 3 cut(s) 287, 1226, 1246
PpuMI RGGWCCY 1 cut(s) 257
Psp5II RGGWCCY 1 cut(s) 257
Psp6I CCWGG 3 cut(s) 259, 375, 455
PspGI CCWGG 3 cut(s) 259, 375, 455
PspN4I GGNNCC 1 cut(s) 137
PspPI GGNCC 3 cut(s) 257, 302, 1363
PspPPI RGGWCCY 1 cut(s) 257
PstNI CAGNNNCTG 1 cut(s) 1048
PsuI RGATCY 1 cut(s) 217
RigI GGCCGGCC 1 cut(s) 1369
RsaI GTAC 3 cut(s) 30, 374, 1032
RsaNI GTAC 3 cut(s) 29, 373, 1031
RseI CAYNNNNRTG 1 cut(s) 1205
Rsr2I CGGWCCG 1 cut(s) 302
RsrII CGGWCCG 1 cut(s) 302
SaqAI TTAA 2 cut(s) 948, 1190
SatI GCNGC 3 cut(s) 1024, 1123, 1322
Sau3AI GATC 4 cut(s) 217, 442, 1068, 1331
Sau96I GGNCC 3 cut(s) 257, 302, 1363
SchI GAGTC 3 cut(s) 288, 1227, 1246
ScrFI CCNGG 5 cut(s) 109, 117, 261, 377, 457
SfaNI GCATC 2 cut(s) 157, 1307
SfcI CTRYAG 1 cut(s) 435
SfuI TTCGAA 1 cut(s) 334
SinI GGWCC 2 cut(s) 257, 302
SmiMI CAYNNNNRTG 1 cut(s) 1205
SmlI CTYRAG 1 cut(s) 1254
SmoI CTYRAG 1 cut(s) 1254
Sse9I AATT 9 cut(s) 39, 102, 387, 494, 604, 615, 658, 824, 949
SseBI AGGCCT 1 cut(s) 313
SsiI CCGC 3 cut(s) 500, 742, 1122
SspI AATATT 2 cut(s) 758, 1270
SspMI CTAG 2 cut(s) 566, 638
StuI AGGCCT 1 cut(s) 313
StyD4I CCNGG 5 cut(s) 107, 115, 259, 375, 455
StyI CCWWGG 2 cut(s) 14, 274
TaaI ACNGT 5 cut(s) 163, 306, 1011, 1207, 1265
TaiI ACGT 2 cut(s) 972, 1032
TaqI TCGA 5 cut(s) 96, 334, 788, 1006, 1159
TasI AATT 9 cut(s) 39, 102, 387, 494, 604, 615, 658, 824, 949
TatI WGTACW 1 cut(s) 28
TauI GCSGC 1 cut(s) 1125
TfiI GAWTC 3 cut(s) 701, 914, 1133
Tru1I TTAA 2 cut(s) 948, 1190
Tru9I TTAA 2 cut(s) 948, 1190
TscAI CASTG 2 cut(s) 1016, 1210
TseFI GTSAC 3 cut(s) 157, 548, 844
TseI GCWGC 2 cut(s) 1023, 1321
Tsp45I GTSAC 3 cut(s) 157, 548, 844
TspDTI ATGAA 3 cut(s) 954, 974, 1160
TspGWI ACGGA 3 cut(s) 315, 428, 715
TspRI CASTG 2 cut(s) 1016, 1210
VpaK11BI GGWCC 2 cut(s) 257, 302
XapI RAATTY 2 cut(s) 494, 824
XceI RCATGY 1 cut(s) 370
XcmI CCANNNNNNNNNTGG 1 cut(s) 146
XspI CTAG 2 cut(s) 566, 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.