Transcription initiation factor TFIID
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73960 AT1G73960 |
| fragaria_vesca | FvH4_5g12730 |
| malus_domestica | MD06G1210800.v1.1 MD06G1211000.v1.1 MD14G1221500.v1.1 MD14G1221600.v1.1 |
| prunus_persica | Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 |
| pyrus_communis | pycom06g18830 pycom14g18330 |
| rosa_chinensis | RchiOBHm_Chr7g0184581 |
| rosa_laevigata | RLG00000003716 RLG00000004966 RLG00000020303 |
| rosa_multiflora | Rmu_ssc0000289.1_g000035 |
| rosa_roxburghii | Rroxscaffold_3G00269500 Rroxscaffold_7G00196400 |
| rosa_rugosa | Rorug06G0007300 Rorug07G0060900 |
| rosa_samantha | Rh2BG075800 Rh2CG077900 Rh5DG337600 Rh5DG495400 Rh6AG042200 Rh6AG254600 Rh7AG079100 Rh7BG068200 Rh7BG189600 Rh7CG069000 Rh7DG068300 Rh7DG191200 Rh7DG191900 |
| rosa_wichuraiana | Rw7G005620 Rw7G016350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 879 |
| AarI | CACCTGC | 1 cut(s) | 2779 |
| Acc36I | ACCTGC | 1 cut(s) | 2779 |
| AccB1I | GGYRCC | 1 cut(s) | 1099 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1777, 3113, 3200 |
| AccI | GTMKAC | 2 cut(s) | 201, 2188 |
| AccII | CGCG | 1 cut(s) | 2652 |
| AccIII | TCCGGA | 1 cut(s) | 4346 |
| AclI | AACGTT | 1 cut(s) | 3493 |
| AclWI | GGATC | 5 cut(s) | 683, 2845, 2993, 3392, 3802 |
| AcoI | YGGCCR | 1 cut(s) | 309 |
| AcuI | CTGAAG | 2 cut(s) | 465, 2764 |
| AcyI | GRCGYC | 1 cut(s) | 33 |
| AflIII | ACRYGT | 2 cut(s) | 807, 3037 |
| AgeI | ACCGGT | 1 cut(s) | 4270 |
| AhlI | ACTAGT | 1 cut(s) | 3635 |
| AjiI | CACGTC | 1 cut(s) | 307 |
| AjnI | CCWGG | 5 cut(s) | 669, 1690, 3084, 3193, 4322 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2442, 2474, 3326, 3358 |
| AleI | CACNNNNGTG | 1 cut(s) | 789 |
| Alw21I | GWGCWC | 7 cut(s) | 129, 278, 296, 534, 739, 3157, 3875 |
| Alw26I | GTCTC | 2 cut(s) | 497, 4325 |
| Alw44I | GTGCAC | 1 cut(s) | 3871 |
| AlwI | GGATC | 5 cut(s) | 683, 2845, 2993, 3392, 3802 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1777, 2165, 3200, 3458, 3707 |
| Ama87I | CYCGRG | 2 cut(s) | 1367, 4328 |
| Aor13HI | TCCGGA | 1 cut(s) | 4346 |
| ApaLI | GTGCAC | 1 cut(s) | 3871 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 693, 725, 1715, 1747 |
| AseI | ATTAAT | 1 cut(s) | 1989 |
| AsiGI | ACCGGT | 1 cut(s) | 4270 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1509, 2093 |
| AspLEI | GCGC | 2 cut(s) | 433, 1815 |
| AspS9I | GGNCC | 8 cut(s) | 53, 139, 969, 1364, 2574, 2970, 3356, 4326 |
| AsuC2I | CCSGG | 2 cut(s) | 143, 1135 |
| AsuHPI | GGTGA | 6 cut(s) | 279, 2212, 2803, 3032, 3915, 4354 |
| AsuII | TTCGAA | 2 cut(s) | 2128, 4393 |
| AsuNHI | GCTAGC | 2 cut(s) | 3692, 3809 |
| AvaI | CYCGRG | 2 cut(s) | 1367, 4328 |
| AvaII | GGWCC | 4 cut(s) | 139, 1364, 2574, 3356 |
| AxyI | CCTNAGG | 1 cut(s) | 1095 |
| BaeGI | GKGCMC | 2 cut(s) | 3422, 3875 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2533, 2566 |
| BanI | GGYRCC | 1 cut(s) | 1099 |
| BanII | GRGCYC | 5 cut(s) | 129, 278, 296, 1411, 4281 |
| BauI | CACGAG | 1 cut(s) | 1036 |
| Bbv12I | GWGCWC | 7 cut(s) | 129, 278, 296, 534, 739, 3157, 3875 |
| BbvCI | CCTCAGC | 1 cut(s) | 1547 |
| BceAI | ACGGC | 2 cut(s) | 647, 1199 |
| BciT130I | CCWGG | 5 cut(s) | 671, 1692, 3086, 3195, 4324 |
| BciVI | GTATCC | 4 cut(s) | 961, 2164, 2957, 3562 |
| BclI | TGATCA | 4 cut(s) | 363, 1021, 1735, 3376 |
| BcnI | CCSGG | 2 cut(s) | 143, 1135 |
| BcoDI | GTCTC | 2 cut(s) | 497, 4325 |
| BcuI | ACTAGT | 1 cut(s) | 3635 |
| BfmI | CTRYAG | 3 cut(s) | 712, 846, 2307 |
| BfoI | RGCGCY | 1 cut(s) | 1816 |
| BfuAI | ACCTGC | 1 cut(s) | 2779 |
| BfuI | GTATCC | 4 cut(s) | 961, 2164, 2957, 3562 |
| BglII | AGATCT | 3 cut(s) | 1433, 3310, 3674 |
| BmcAI | AGTACT | 2 cut(s) | 227, 2286 |
| Bme1390I | CCNGG | 7 cut(s) | 143, 671, 1135, 1692, 3086, 3195, 4324 |
| Bme18I | GGWCC | 4 cut(s) | 139, 1364, 2574, 3356 |
| BmeT110I | CYCGRG | 2 cut(s) | 1367, 4328 |
| BmgBI | CACGTC | 1 cut(s) | 307 |
| BmgT120I | GGNCC | 8 cut(s) | 53, 139, 969, 1364, 2574, 2970, 3356, 4326 |
| BmrFI | CCNGG | 7 cut(s) | 143, 671, 1135, 1692, 3086, 3195, 4324 |
| BmrI | ACTGGG | 1 cut(s) | 4275 |
| BmtI | GCTAGC | 2 cut(s) | 3696, 3813 |
| BmuI | ACTGGG | 1 cut(s) | 4275 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1369 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2854, 2886 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1547, 2022, 3749 |
| Bpu14I | TTCGAA | 2 cut(s) | 2128, 4393 |
| BpuEI | CTTGAG | 8 cut(s) | 113, 356, 978, 979, 1395, 2309, 3210, 3663 |
| BpuMI | CCSGG | 2 cut(s) | 143, 1135 |
| BsaAI | YACGTR | 1 cut(s) | 1604 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1703 |
| BsaHI | GRCGYC | 1 cut(s) | 33 |
| BsaWI | WCCGGW | 2 cut(s) | 4270, 4346 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 209, 239, 1752, 1782 |
| Bse118I | RCCGGY | 3 cut(s) | 211, 311, 4270 |
| Bse1I | ACTGG | 6 cut(s) | 275, 658, 728, 1125, 1742, 4281 |
| Bse21I | CCTNAGG | 1 cut(s) | 1095 |
| Bse3DI | GCAATG | 3 cut(s) | 1541, 2046, 3008 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1703 |
| BseAI | TCCGGA | 1 cut(s) | 4346 |
| BseBI | CCWGG | 5 cut(s) | 671, 1692, 3086, 3195, 4324 |
| BseJI | GATNNNNATC | 1 cut(s) | 1703 |
| BseMI | GCAATG | 3 cut(s) | 1541, 2046, 3008 |
| BseNI | ACTGG | 6 cut(s) | 275, 658, 728, 1125, 1742, 4281 |
| BseSI | GKGCMC | 2 cut(s) | 3422, 3875 |
| BseYI | CCCAGC | 2 cut(s) | 1518, 2058 |
| BsgI | GTGCAG | 3 cut(s) | 1245, 3062, 3980 |
| Bsh1236I | CGCG | 1 cut(s) | 2652 |
| BshNI | GGYRCC | 1 cut(s) | 1099 |
| BshTI | ACCGGT | 1 cut(s) | 4270 |
| BsiHKAI | GWGCWC | 7 cut(s) | 129, 278, 296, 534, 739, 3157, 3875 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1367, 4328 |
| BsiSI | CCGG | 7 cut(s) | 51, 143, 212, 312, 1134, 4271, 4347 |
| BslFI | GGGAC | 5 cut(s) | 125, 281, 1377, 2560, 2597 |
| BsmAI | GTCTC | 2 cut(s) | 497, 4325 |
| BsmFI | GGGAC | 5 cut(s) | 125, 281, 1377, 2560, 2597 |
| BsoBI | CYCGRG | 2 cut(s) | 1367, 4328 |
| Bsp119I | TTCGAA | 2 cut(s) | 2128, 4393 |
| Bsp13I | TCCGGA | 1 cut(s) | 4346 |
| Bsp1407I | TGTACA | 3 cut(s) | 1975, 3898, 4036 |
| Bsp19I | CCATGG | 4 cut(s) | 1752, 3168, 3237, 3528 |
| Bsp68I | TCGCGA | 1 cut(s) | 2652 |
| BspEI | TCCGGA | 1 cut(s) | 4346 |
| BspFNI | CGCG | 1 cut(s) | 2652 |
| BspHI | TCATGA | 4 cut(s) | 1714, 3477, 3547, 3784 |
| BspMI | ACCTGC | 1 cut(s) | 2779 |
| BspOI | GCTAGC | 2 cut(s) | 3696, 3813 |
| BspPI | GGATC | 5 cut(s) | 683, 2845, 2993, 3392, 3802 |
| BspQI | GCTCTTC | 1 cut(s) | 2763 |
| BspT104I | TTCGAA | 2 cut(s) | 2128, 4393 |
| BspT107I | GGYRCC | 1 cut(s) | 1099 |
| BsrDI | GCAATG | 3 cut(s) | 1541, 2046, 3008 |
| BsrFI | RCCGGY | 3 cut(s) | 211, 311, 4270 |
| BsrGI | TGTACA | 3 cut(s) | 1975, 3898, 4036 |
| BsrI | ACTGG | 6 cut(s) | 275, 658, 728, 1125, 1742, 4281 |
| BssAI | RCCGGY | 3 cut(s) | 211, 311, 4270 |
| BssNI | GRCGYC | 1 cut(s) | 33 |
| BssSI | CACGAG | 1 cut(s) | 1036 |
| BssT1I | CCWWGG | 9 cut(s) | 1752, 2109, 3168, 3237, 3303, 3468, 3498, 3528, 3558 |
| Bst2BI | CACGAG | 1 cut(s) | 1036 |
| Bst2UI | CCWGG | 5 cut(s) | 671, 1692, 3086, 3195, 4324 |
| Bst6I | CTCTTC | 3 cut(s) | 595, 2496, 2763 |
| BstACI | GRCGYC | 1 cut(s) | 33 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1211, 1877, 2144, 3839 |
| BstAUI | TGTACA | 3 cut(s) | 1975, 3898, 4036 |
| BstBAI | YACGTR | 1 cut(s) | 1604 |
| BstBI | TTCGAA | 2 cut(s) | 2128, 4393 |
| BstDSI | CCRYGG | 5 cut(s) | 1752, 3168, 3237, 3528, 4212 |
| BstFNI | CGCG | 1 cut(s) | 2652 |
| BstH2I | RGCGCY | 1 cut(s) | 1816 |
| BstHHI | GCGC | 2 cut(s) | 433, 1815 |
| BstMAI | GTCTC | 2 cut(s) | 497, 4325 |
| BstNI | CCWGG | 5 cut(s) | 671, 1692, 3086, 3195, 4324 |
| BstNSI | RCATGY | 5 cut(s) | 811, 2306, 2810, 3041, 3692 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1369 |
| BstSCI | CCNGG | 7 cut(s) | 141, 669, 1133, 1690, 3084, 3193, 4322 |
| BstSFI | CTRYAG | 3 cut(s) | 712, 846, 2307 |
| BstSLI | GKGCMC | 2 cut(s) | 3422, 3875 |
| BstUI | CGCG | 1 cut(s) | 2652 |
| BstX2I | RGATCY | 6 cut(s) | 1433, 2837, 2998, 3310, 3397, 3674 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 791 |
| BstYI | RGATCY | 6 cut(s) | 1433, 2837, 2998, 3310, 3397, 3674 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1095 |
| BsuI | GTATCC | 4 cut(s) | 961, 2164, 2957, 3562 |
| BtgI | CCRYGG | 5 cut(s) | 1752, 3168, 3237, 3528, 4212 |
| BtrI | CACGTC | 1 cut(s) | 307 |
| BtsI | GCAGTG | 4 cut(s) | 1257, 2716, 3873, 3875 |
| BtuMI | TCGCGA | 1 cut(s) | 2652 |
| BveI | ACCTGC | 1 cut(s) | 2779 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1777, 2165, 3200, 3458, 3707 |
| CciI | TCATGA | 4 cut(s) | 1714, 3477, 3547, 3784 |
| CfoI | GCGC | 2 cut(s) | 433, 1815 |
| Cfr10I | RCCGGY | 3 cut(s) | 211, 311, 4270 |
| Cfr13I | GGNCC | 8 cut(s) | 53, 139, 969, 1364, 2574, 2970, 3356, 4326 |
| CseI | GACGC | 2 cut(s) | 41, 1478 |
| CsiI | ACCWGGT | 1 cut(s) | 669 |
| CspAI | ACCGGT | 1 cut(s) | 4270 |
| DraI | TTTAAA | 1 cut(s) | 4143 |
| EaeI | YGGCCR | 1 cut(s) | 309 |
| Eam1104I | CTCTTC | 3 cut(s) | 595, 2496, 2763 |
| EarI | CTCTTC | 3 cut(s) | 595, 2496, 2763 |
| EciI | GGCGGA | 2 cut(s) | 53, 230 |
| Ecl136II | GAGCTC | 3 cut(s) | 127, 276, 294 |
| Eco130I | CCWWGG | 9 cut(s) | 1752, 2109, 3168, 3237, 3303, 3468, 3498, 3528, 3558 |
| Eco147I | AGGCCT | 1 cut(s) | 2114 |
| Eco24I | GRGCYC | 5 cut(s) | 129, 278, 296, 1411, 4281 |
| Eco32I | GATATC | 4 cut(s) | 747, 2656, 3475, 3505 |
| Eco47I | GGWCC | 4 cut(s) | 139, 1364, 2574, 3356 |
| Eco53kI | GAGCTC | 3 cut(s) | 127, 276, 294 |
| Eco57I | CTGAAG | 2 cut(s) | 465, 2764 |
| Eco81I | CCTNAGG | 1 cut(s) | 1095 |
| Eco88I | CYCGRG | 2 cut(s) | 1367, 4328 |
| EcoICRI | GAGCTC | 3 cut(s) | 127, 276, 294 |
| EcoO109I | RGGNCCY | 5 cut(s) | 969, 1364, 2574, 2970, 3356 |
| EcoRI | GAATTC | 2 cut(s) | 1505, 2711 |
| EcoRII | CCWGG | 5 cut(s) | 669, 1690, 3084, 3193, 4322 |
| EcoRV | GATATC | 4 cut(s) | 747, 2656, 3475, 3505 |
| EcoT14I | CCWWGG | 9 cut(s) | 1752, 2109, 3168, 3237, 3303, 3468, 3498, 3528, 3558 |
| EcoT38I | GRGCYC | 5 cut(s) | 129, 278, 296, 1411, 4281 |
| ErhI | CCWWGG | 9 cut(s) | 1752, 2109, 3168, 3237, 3303, 3468, 3498, 3528, 3558 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2685, 2717, 3491, 3523 |
| FaqI | GGGAC | 5 cut(s) | 125, 281, 1377, 2560, 2597 |
| FauI | CCCGC | 2 cut(s) | 1193, 4086 |
| FauNDI | CATATG | 2 cut(s) | 706, 2666 |
| FbaI | TGATCA | 4 cut(s) | 363, 1021, 1735, 3376 |
| FblI | GTMKAC | 2 cut(s) | 201, 2188 |
| FriOI | GRGCYC | 5 cut(s) | 129, 278, 296, 1411, 4281 |
| GlaI | GCGC | 2 cut(s) | 432, 1814 |
| GsaI | CCCAGC | 2 cut(s) | 1522, 2062 |
| HaeII | RGCGCY | 1 cut(s) | 1816 |
| HapII | CCGG | 7 cut(s) | 51, 143, 212, 312, 1134, 4271, 4347 |
| HgaI | GACGC | 2 cut(s) | 41, 1478 |
| HhaI | GCGC | 2 cut(s) | 433, 1815 |
| Hin1I | GRCGYC | 1 cut(s) | 33 |
| Hin6I | GCGC | 2 cut(s) | 431, 1813 |
| HinP1I | GCGC | 2 cut(s) | 431, 1813 |
| HincII | GTYRAC | 3 cut(s) | 202, 2104, 3775 |
| HindII | GTYRAC | 3 cut(s) | 202, 2104, 3775 |
| HindIII | AAGCTT | 3 cut(s) | 833, 1799, 3297 |
| HpaI | GTTAAC | 1 cut(s) | 3775 |
| HpaII | CCGG | 7 cut(s) | 51, 143, 212, 312, 1134, 4271, 4347 |
| HphI | GGTGA | 6 cut(s) | 279, 2212, 2803, 3032, 3915, 4354 |
| Hpy166II | GTNNAC | 9 cut(s) | 120, 202, 621, 898, 2104, 2189, 3775, 3873, 4216 |
| Hpy8I | GTNNAC | 9 cut(s) | 120, 202, 621, 898, 2104, 2189, 3775, 3873, 4216 |
| Hpy99I | CGWCG | 2 cut(s) | 108, 206 |
| HpyCH4IV | ACGT | 6 cut(s) | 306, 324, 1603, 1730, 2500, 3493 |
| HpySE526I | ACGT | 6 cut(s) | 306, 324, 1603, 1730, 2500, 3493 |
| Hsp92I | GRCGYC | 1 cut(s) | 33 |
| HspAI | GCGC | 2 cut(s) | 431, 1813 |
| KflI | GGGWCCC | 1 cut(s) | 1364 |
| Kpn2I | TCCGGA | 1 cut(s) | 4346 |
| KroI | GCCGGC | 1 cut(s) | 211 |
| KroNI | GCCGGC | 1 cut(s) | 213 |
| Ksp22I | TGATCA | 4 cut(s) | 363, 1021, 1735, 3376 |
| KspAI | GTTAAC | 1 cut(s) | 3775 |
| LguI | GCTCTTC | 1 cut(s) | 2763 |
| MabI | ACCWGGT | 1 cut(s) | 669 |
| MaeII | ACGT | 6 cut(s) | 306, 324, 1603, 1730, 2500, 3493 |
| MaeIII | GTNAC | 5 cut(s) | 285, 320, 1670, 2200, 4118 |
| MfeI | CAATTG | 2 cut(s) | 367, 2034 |
| MflI | RGATCY | 6 cut(s) | 1433, 2837, 2998, 3310, 3397, 3674 |
| MlyI | GAGTC | 5 cut(s) | 581, 1379, 2099, 2235, 2863 |
| MmeI | TCCRAC | 3 cut(s) | 1329, 1977, 2425 |
| MroI | TCCGGA | 1 cut(s) | 4346 |
| MroNI | GCCGGC | 1 cut(s) | 211 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1509, 2093 |
| MslI | CAYNNNNRTG | 5 cut(s) | 789, 1616, 3114, 3789, 4110 |
| MspA1I | CMGCKG | 3 cut(s) | 1774, 2565, 3407 |
| MspI | CCGG | 7 cut(s) | 51, 143, 212, 312, 1134, 4271, 4347 |
| MspR9I | CCNGG | 7 cut(s) | 143, 671, 1135, 1692, 3086, 3195, 4324 |
| MunI | CAATTG | 2 cut(s) | 367, 2034 |
| MvaI | CCWGG | 5 cut(s) | 671, 1692, 3086, 3195, 4324 |
| MvnI | CGCG | 1 cut(s) | 2652 |
| NaeI | GCCGGC | 1 cut(s) | 213 |
| NciI | CCSGG | 2 cut(s) | 143, 1135 |
| NcoI | CCATGG | 4 cut(s) | 1752, 3168, 3237, 3528 |
| NdeI | CATATG | 2 cut(s) | 706, 2666 |
| NgoMIV | GCCGGC | 1 cut(s) | 211 |
| NheI | GCTAGC | 2 cut(s) | 3692, 3809 |
| NmeAIII | GCCGAG | 2 cut(s) | 196, 275 |
| NmuCI | GTSAC | 3 cut(s) | 285, 2200, 4118 |
| NruI | TCGCGA | 1 cut(s) | 2652 |
| NspI | RCATGY | 5 cut(s) | 811, 2306, 2810, 3041, 3692 |
| NspV | TTCGAA | 2 cut(s) | 2128, 4393 |
| OliI | CACNNNNGTG | 1 cut(s) | 789 |
| PaeI | GCATGC | 2 cut(s) | 2810, 3692 |
| PagI | TCATGA | 4 cut(s) | 1714, 3477, 3547, 3784 |
| PaqCI | CACCTGC | 1 cut(s) | 2779 |
| PceI | AGGCCT | 1 cut(s) | 2114 |
| PciI | ACATGT | 2 cut(s) | 807, 3037 |
| PciSI | GCTCTTC | 1 cut(s) | 2763 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 39, 4114 |
| PdiI | GCCGGC | 1 cut(s) | 213 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1509, 2093 |
| PfeI | GAWTC | 8 cut(s) | 251, 472, 1625, 1634, 1658, 1904, 3881, 4372 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1777, 3113, 3200 |
| PfoI | TCCNGGA | 1 cut(s) | 141 |
| PinAI | ACCGGT | 1 cut(s) | 4270 |
| PleI | GAGTC | 5 cut(s) | 581, 1378, 2099, 2235, 2863 |
| PpsI | GAGTC | 5 cut(s) | 581, 1378, 2099, 2235, 2863 |
| Ppu21I | YACGTR | 1 cut(s) | 1604 |
| PpuMI | RGGWCCY | 3 cut(s) | 1364, 2574, 3356 |
| PscI | ACATGT | 2 cut(s) | 807, 3037 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1369 |
| PshBI | ATTAAT | 1 cut(s) | 1989 |
| PsiI | TTATAA | 1 cut(s) | 879 |
| Psp124BI | GAGCTC | 3 cut(s) | 129, 278, 296 |
| Psp1406I | AACGTT | 1 cut(s) | 3493 |
| Psp5II | RGGWCCY | 3 cut(s) | 1364, 2574, 3356 |
| Psp6I | CCWGG | 5 cut(s) | 669, 1690, 3084, 3193, 4322 |
| PspFI | CCCAGC | 2 cut(s) | 1518, 2058 |
| PspGI | CCWGG | 5 cut(s) | 669, 1690, 3084, 3193, 4322 |
| PspPI | GGNCC | 8 cut(s) | 53, 139, 969, 1364, 2574, 2970, 3356, 4326 |
| PspPPI | RGGWCCY | 3 cut(s) | 1364, 2574, 3356 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1777, 2165, 3200, 3458, 3707 |
| PsuI | RGATCY | 6 cut(s) | 1433, 2837, 2998, 3310, 3397, 3674 |
| PvuII | CAGCTG | 2 cut(s) | 1774, 2565 |
| RruI | TCGCGA | 1 cut(s) | 2652 |
| RseI | CAYNNNNRTG | 5 cut(s) | 789, 1616, 3114, 3789, 4110 |
| SacI | GAGCTC | 3 cut(s) | 129, 278, 296 |
| SalI | GTCGAC | 1 cut(s) | 200 |
| SapI | GCTCTTC | 1 cut(s) | 2763 |
| Sau96I | GGNCC | 8 cut(s) | 53, 139, 969, 1364, 2574, 2970, 3356, 4326 |
| ScaI | AGTACT | 2 cut(s) | 227, 2286 |
| SchI | GAGTC | 5 cut(s) | 581, 1379, 2099, 2235, 2863 |
| ScrFI | CCNGG | 7 cut(s) | 143, 671, 1135, 1692, 3086, 3195, 4324 |
| SexAI | ACCWGGT | 1 cut(s) | 669 |
| SfcI | CTRYAG | 3 cut(s) | 712, 846, 2307 |
| SfuI | TTCGAA | 2 cut(s) | 2128, 4393 |
| SinI | GGWCC | 4 cut(s) | 139, 1364, 2574, 3356 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 789, 1616, 3114, 3789, 4110 |
| SmlI | CTYRAG | 8 cut(s) | 128, 335, 958, 993, 1410, 2288, 3225, 3678 |
| SmoI | CTYRAG | 8 cut(s) | 128, 335, 958, 993, 1410, 2288, 3225, 3678 |
| SpeI | ACTAGT | 1 cut(s) | 3635 |
| SphI | GCATGC | 2 cut(s) | 2810, 3692 |
| SseBI | AGGCCT | 1 cut(s) | 2114 |
| SstI | GAGCTC | 3 cut(s) | 129, 278, 296 |
| StuI | AGGCCT | 1 cut(s) | 2114 |
| StyD4I | CCNGG | 7 cut(s) | 141, 669, 1133, 1690, 3084, 3193, 4322 |
| StyI | CCWWGG | 9 cut(s) | 1752, 2109, 3168, 3237, 3303, 3468, 3498, 3528, 3558 |
| TaiI | ACGT | 6 cut(s) | 309, 327, 1606, 1733, 2503, 3496 |
| TaqI | TCGA | 9 cut(s) | 90, 201, 1403, 2128, 2218, 2929, 4108, 4314, 4393 |
| TatI | WGTACW | 6 cut(s) | 225, 1975, 2284, 2379, 3898, 4036 |
| TauI | GCSGC | 1 cut(s) | 556 |
| TfiI | GAWTC | 8 cut(s) | 251, 472, 1625, 1634, 1658, 1904, 3881, 4372 |
| TseFI | GTSAC | 3 cut(s) | 285, 2200, 4118 |
| Tsp45I | GTSAC | 3 cut(s) | 285, 2200, 4118 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1777, 3113, 3200 |
| VneI | GTGCAC | 1 cut(s) | 3871 |
| VpaK11BI | GGWCC | 4 cut(s) | 139, 1364, 2574, 3356 |
| VspI | ATTAAT | 1 cut(s) | 1989 |
| XbaI | TCTAGA | 1 cut(s) | 3361 |
| XceI | RCATGY | 5 cut(s) | 811, 2306, 2810, 3041, 3692 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 3110, 3145, 3505, 3535 |
| XmiI | GTMKAC | 2 cut(s) | 201, 2188 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1509, 2093 |
| ZrmI | AGTACT | 2 cut(s) | 227, 2286 |