Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0003127

Physical Location & Seq

Genomic Coordinates Forward (+)

30317361 .. 30318031

Gene Structure 671 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1221500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 222 bp

ATGGTTAGTGTTAAAATTGTGGTCCCAGAAATTGGGATTGTGGGGTTACACGCAGAGAATTTGGGGATTGAGAGTGTTTCAGTCGACGGTGAGCAGACCGAGTTCGAATACTACCCACAGAGTAATCATAAAGATGAGGAGAGCGAGAGGAGCTGGAGCTGGGTGACGTCGCCAAGCTCCGCTGCCGATGCGGCTGGGGTCAACATATATATCGGCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001129 GO:0001132 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005911 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022607 GO:0030054 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0055029 GO:0055044 GO:0060255 GO:0061695 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 map03022

Pfam Domains

Protein Families

Peptidase_M1

Protein Analysis

74

Amino Acids

7.9

Weight (kDa)

4.22

Isoelectric Point (pI)

65.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003127)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73960 AT1G73960
fragaria_vesca	FvH4_5g12730
malus_domestica	MD06G1210800.v1.1 MD06G1211000.v1.1 MD14G1221500.v1.1 MD14G1221600.v1.1
prunus_persica	Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1
pyrus_communis	pycom06g18830 pycom14g18330
rosa_chinensis	RchiOBHm_Chr7g0184581
rosa_laevigata	RLG00000003716 RLG00000004966 RLG00000020303
rosa_multiflora	Rmu_ssc0000289.1_g000035
rosa_roxburghii	Rroxscaffold_3G00269500 Rroxscaffold_7G00196400
rosa_rugosa	Rorug06G0007300 Rorug07G0060900
rosa_samantha	Rh2BG075800 Rh2CG077900 Rh5DG337600 Rh5DG495400 Rh6AG042200 Rh6AG254600 Rh7AG079100 Rh7BG068200 Rh7BG189600 Rh7CG069000 Rh7DG068300 Rh7DG191200 Rh7DG191900
rosa_wichuraiana	Rw7G005620 Rw7G016350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	170
AccB7I	CCANNNNNTGG	1 cut(s)	32
AccI	GTMKAC	1 cut(s)	84
AciI	CCGC	2 cut(s)	180, 191
AcsI	RAATTY	1 cut(s)	58
AcyI	GRCGYC	1 cut(s)	167
AfiI	CCNNNNNNNGG	1 cut(s)	32
AluBI	AGCT	3 cut(s)	153, 159, 177
AluI	AGCT	3 cut(s)	153, 159, 177
ApeKI	GCWGC	1 cut(s)	182
ApoI	RAATTY	1 cut(s)	58
AspS9I	GGNCC	1 cut(s)	22
AsuHPI	GGTGA	2 cut(s)	101, 175
AsuII	TTCGAA	1 cut(s)	105
AvaII	GGWCC	1 cut(s)	22
BbvI	GCAGC	1 cut(s)	169
BglI	GCCNNNNNGGC	1 cut(s)	191
BisI	GCNGC	2 cut(s)	183, 192
BlsI	GCNGC	2 cut(s)	184, 193
Bme18I	GGWCC	1 cut(s)	22
BmgT120I	GGNCC	1 cut(s)	22
BmiI	GGNNCC	1 cut(s)	24
BmsI	GCATC	1 cut(s)	178
BpmI	CTGGAG	1 cut(s)	175
Bpu14I	TTCGAA	1 cut(s)	105
BsaHI	GRCGYC	1 cut(s)	167
Bsc4I	CCNNNNNNNGG	1 cut(s)	32
BseLI	CCNNNNNNNGG	1 cut(s)	32
BseRI	GAGGAG	2 cut(s)	152, 163
BseXI	GCAGC	1 cut(s)	169
BseYI	CCCAGC	2 cut(s)	159, 194
BslFI	GGGAC	1 cut(s)	8
BslI	CCNNNNNNNGG	1 cut(s)	32
BsmFI	GGGAC	1 cut(s)	8
Bsp119I	TTCGAA	1 cut(s)	105
BspACI	CCGC	2 cut(s)	180, 191
BspLI	GGNNCC	1 cut(s)	24
BspT104I	TTCGAA	1 cut(s)	105
BssNI	GRCGYC	1 cut(s)	167
Bst4CI	ACNGT	1 cut(s)	89
BstACI	GRCGYC	1 cut(s)	167
BstBI	TTCGAA	1 cut(s)	105
BstMWI	GCNNNNNNNGC	3 cut(s)	150, 188, 191
BstV1I	GCAGC	1 cut(s)	169
Cfr13I	GGNCC	1 cut(s)	22
CviJI	RGCY	5 cut(s)	153, 159, 177, 194, 216
CviKI_1	RGCY	5 cut(s)	153, 159, 177, 194, 216
Eco47I	GGWCC	1 cut(s)	22
FaiI	YATR	4 cut(s)	129, 206, 208, 210
FaqI	GGGAC	1 cut(s)	8
FblI	GTMKAC	1 cut(s)	84
Fnu4HI	GCNGC	2 cut(s)	183, 192
Fsp4HI	GCNGC	2 cut(s)	183, 192
GluI	GCNGC	2 cut(s)	183, 192
GsaI	CCCAGC	2 cut(s)	163, 198
GsuI	CTGGAG	1 cut(s)	175
Hin1I	GRCGYC	1 cut(s)	167
HincII	GTYRAC	2 cut(s)	85, 202
HindII	GTYRAC	2 cut(s)	85, 202
HphI	GGTGA	2 cut(s)	101, 175
Hpy166II	GTNNAC	2 cut(s)	85, 202
Hpy188III	TCNNGA	1 cut(s)	219
Hpy8I	GTNNAC	2 cut(s)	85, 202
Hpy99I	CGWCG	2 cut(s)	89, 172
HpyCH4III	ACNGT	1 cut(s)	89
HpyCH4IV	ACGT	1 cut(s)	167
HpyF10VI	GCNNNNNNNGC	3 cut(s)	150, 188, 191
HpySE526I	ACGT	1 cut(s)	167
Hsp92I	GRCGYC	1 cut(s)	167
LmnI	GCTCC	3 cut(s)	150, 156, 182
LpnPI	CCDG	4 cut(s)	39, 139, 145, 180
Lsp1109I	GCAGC	1 cut(s)	169
LweI	GCATC	1 cut(s)	178
MaeII	ACGT	1 cut(s)	167
MaeIII	GTNAC	2 cut(s)	45, 163
MluCI	AATT	3 cut(s)	15, 30, 58
MnlI	CCTC	2 cut(s)	130, 141
MseI	TTAA	1 cut(s)	12
MslI	CAYNNNNRTG	1 cut(s)	132
MspA1I	CMGCKG	1 cut(s)	182
MwoI	GCNNNNNNNGC	3 cut(s)	150, 188, 191
NlaIV	GGNNCC	1 cut(s)	24
NmuCI	GTSAC	1 cut(s)	163
NspV	TTCGAA	1 cut(s)	105
PflMI	CCANNNNNTGG	1 cut(s)	32
PkrI	GCNGC	2 cut(s)	184, 193
PspFI	CCCAGC	2 cut(s)	159, 194
PspN4I	GGNNCC	1 cut(s)	24
PspPI	GGNCC	1 cut(s)	22
RseI	CAYNNNNRTG	1 cut(s)	132
SalI	GTCGAC	1 cut(s)	83
SaqAI	TTAA	1 cut(s)	12
SatI	GCNGC	2 cut(s)	183, 192
Sau96I	GGNCC	1 cut(s)	22
SetI	ASST	4 cut(s)	155, 161, 170, 179
SfaNI	GCATC	1 cut(s)	178
SfuI	TTCGAA	1 cut(s)	105
SgeI	CNNG	8 cut(s)	38, 62, 112, 157, 166, 172, 186, 207
SinI	GGWCC	1 cut(s)	22
SmiMI	CAYNNNNRTG	1 cut(s)	132
Sse9I	AATT	3 cut(s)	15, 30, 58
SsiI	CCGC	2 cut(s)	180, 191
TaaI	ACNGT	1 cut(s)	89
TaiI	ACGT	1 cut(s)	170
TaqI	TCGA	2 cut(s)	84, 105
TaqII	GACCGA	1 cut(s)	113
TasI	AATT	3 cut(s)	15, 30, 58
TauI	GCSGC	1 cut(s)	194
Tru1I	TTAA	1 cut(s)	12
Tru9I	TTAA	1 cut(s)	12
TseFI	GTSAC	1 cut(s)	163
TseI	GCWGC	1 cut(s)	182
Tsp45I	GTSAC	1 cut(s)	163
Van91I	CCANNNNNTGG	1 cut(s)	32
VpaK11BI	GGWCC	1 cut(s)	22
XapI	RAATTY	1 cut(s)	58
XmiI	GTMKAC	1 cut(s)	84
ZraI	GACGTC	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.