Transcription initiation factor TFIID
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73960 AT1G73960 |
| fragaria_vesca | FvH4_5g12730 |
| malus_domestica | MD06G1210800.v1.1 MD06G1211000.v1.1 MD14G1221500.v1.1 MD14G1221600.v1.1 |
| prunus_persica | Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 |
| pyrus_communis | pycom06g18830 pycom14g18330 |
| rosa_chinensis | RchiOBHm_Chr7g0184581 |
| rosa_laevigata | RLG00000003716 RLG00000004966 RLG00000020303 |
| rosa_multiflora | Rmu_ssc0000289.1_g000035 |
| rosa_roxburghii | Rroxscaffold_3G00269500 Rroxscaffold_7G00196400 |
| rosa_rugosa | Rorug06G0007300 Rorug07G0060900 |
| rosa_samantha | Rh2BG075800 Rh2CG077900 Rh5DG337600 Rh5DG495400 Rh6AG042200 Rh6AG254600 Rh7AG079100 Rh7BG068200 Rh7BG189600 Rh7CG069000 Rh7DG068300 Rh7DG191200 Rh7DG191900 |
| rosa_wichuraiana | Rw7G005620 Rw7G016350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 224 |
| AcsI | RAATTY | 1 cut(s) | 184 |
| AcuI | CTGAAG | 1 cut(s) | 42 |
| AgsI | TTSAA | 2 cut(s) | 8, 248 |
| AjnI | CCWGG | 1 cut(s) | 41 |
| AluBI | AGCT | 2 cut(s) | 124, 179 |
| AluI | AGCT | 2 cut(s) | 124, 179 |
| ApeKI | GCWGC | 1 cut(s) | 176 |
| ApoI | RAATTY | 1 cut(s) | 184 |
| AseI | ATTAAT | 1 cut(s) | 51 |
| BbvI | GCAGC | 1 cut(s) | 188 |
| BccI | CCATC | 1 cut(s) | 40 |
| BciT130I | CCWGG | 1 cut(s) | 43 |
| BisI | GCNGC | 2 cut(s) | 177, 225 |
| BlsI | GCNGC | 2 cut(s) | 178, 226 |
| Bme1390I | CCNGG | 1 cut(s) | 43 |
| BmrFI | CCNGG | 1 cut(s) | 43 |
| BmsI | GCATC | 2 cut(s) | 201, 211 |
| Bpu10I | CCTNAGC | 1 cut(s) | 84 |
| BpuEI | CTTGAG | 1 cut(s) | 128 |
| BsaBI | GATNNNNATC | 1 cut(s) | 51 |
| BsaJI | CCNNGG | 3 cut(s) | 41, 42, 171 |
| Bse3DI | GCAATG | 1 cut(s) | 108 |
| Bse8I | GATNNNNATC | 1 cut(s) | 51 |
| BseBI | CCWGG | 1 cut(s) | 43 |
| BseDI | CCNNGG | 3 cut(s) | 41, 42, 171 |
| BseJI | GATNNNNATC | 1 cut(s) | 51 |
| BseMI | GCAATG | 1 cut(s) | 108 |
| BseMII | CTCAG | 1 cut(s) | 98 |
| BseXI | GCAGC | 1 cut(s) | 188 |
| BspACI | CCGC | 1 cut(s) | 224 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BsrDI | GCAATG | 1 cut(s) | 108 |
| BssECI | CCNNGG | 3 cut(s) | 41, 42, 171 |
| BssT1I | CCWWGG | 1 cut(s) | 171 |
| Bst2UI | CCWGG | 1 cut(s) | 43 |
| Bst4CI | ACNGT | 1 cut(s) | 272 |
| BstC8I | GCNNGC | 1 cut(s) | 15 |
| BstDEI | CTNAG | 1 cut(s) | 84 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstNI | CCWGG | 1 cut(s) | 43 |
| BstSCI | CCNGG | 1 cut(s) | 41 |
| BstV1I | GCAGC | 1 cut(s) | 188 |
| BtsI | GCAGTG | 1 cut(s) | 35 |
| BtsIMutI | CAGTG | 2 cut(s) | 35, 268 |
| Cac8I | GCNNGC | 1 cut(s) | 15 |
| CviJI | RGCY | 3 cut(s) | 17, 124, 179 |
| CviKI_1 | RGCY | 3 cut(s) | 17, 124, 179 |
| DdeI | CTNAG | 1 cut(s) | 84 |
| Eco130I | CCWWGG | 1 cut(s) | 171 |
| Eco57I | CTGAAG | 1 cut(s) | 42 |
| EcoRII | CCWGG | 1 cut(s) | 41 |
| EcoT14I | CCWWGG | 1 cut(s) | 171 |
| ErhI | CCWWGG | 1 cut(s) | 171 |
| FaiI | YATR | 1 cut(s) | 153 |
| Fnu4HI | GCNGC | 2 cut(s) | 177, 225 |
| Fsp4HI | GCNGC | 2 cut(s) | 177, 225 |
| GluI | GCNGC | 2 cut(s) | 177, 225 |
| HinfI | GANTC | 2 cut(s) | 110, 167 |
| Hpy188I | TCNGA | 2 cut(s) | 190, 234 |
| HpyAV | CCTTC | 4 cut(s) | 17, 58, 229, 242 |
| HpyCH4III | ACNGT | 1 cut(s) | 272 |
| HpyCH4IV | ACGT | 1 cut(s) | 118 |
| HpyCH4V | TGCA | 4 cut(s) | 13, 101, 151, 283 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 1 cut(s) | 84 |
| HpySE526I | ACGT | 1 cut(s) | 118 |
| LpnPI | CCDG | 4 cut(s) | 28, 55, 71, 165 |
| Lsp1109I | GCAGC | 1 cut(s) | 188 |
| LweI | GCATC | 2 cut(s) | 201, 211 |
| MaeII | ACGT | 1 cut(s) | 118 |
| MfeI | CAATTG | 1 cut(s) | 96 |
| MluCI | AATT | 2 cut(s) | 96, 184 |
| MlyI | GAGTC | 2 cut(s) | 119, 161 |
| MmeI | TCCRAC | 1 cut(s) | 39 |
| MseI | TTAA | 3 cut(s) | 51, 141, 197 |
| MspA1I | CMGCKG | 1 cut(s) | 179 |
| MspR9I | CCNGG | 1 cut(s) | 43 |
| MunI | CAATTG | 1 cut(s) | 96 |
| MvaI | CCWGG | 1 cut(s) | 43 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| PasI | CCCWGGG | 1 cut(s) | 42 |
| PkrI | GCNGC | 2 cut(s) | 178, 226 |
| PleI | GAGTC | 2 cut(s) | 118, 161 |
| PpsI | GAGTC | 2 cut(s) | 118, 161 |
| PshBI | ATTAAT | 1 cut(s) | 51 |
| Psp6I | CCWGG | 1 cut(s) | 41 |
| PspGI | CCWGG | 1 cut(s) | 41 |
| PvuII | CAGCTG | 1 cut(s) | 179 |
| SaqAI | TTAA | 3 cut(s) | 51, 141, 197 |
| SatI | GCNGC | 2 cut(s) | 177, 225 |
| SchI | GAGTC | 2 cut(s) | 119, 161 |
| ScrFI | CCNGG | 1 cut(s) | 43 |
| SetI | ASST | 4 cut(s) | 121, 126, 181, 204 |
| SfaNI | GCATC | 2 cut(s) | 201, 211 |
| SmlI | CTYRAG | 1 cut(s) | 107 |
| SmoI | CTYRAG | 1 cut(s) | 107 |
| Sse9I | AATT | 2 cut(s) | 96, 184 |
| SsiI | CCGC | 1 cut(s) | 224 |
| StyD4I | CCNGG | 1 cut(s) | 41 |
| StyI | CCWWGG | 1 cut(s) | 171 |
| TaaI | ACNGT | 1 cut(s) | 272 |
| TaiI | ACGT | 1 cut(s) | 121 |
| TasI | AATT | 2 cut(s) | 96, 184 |
| TauI | GCSGC | 1 cut(s) | 227 |
| Tru1I | TTAA | 3 cut(s) | 51, 141, 197 |
| Tru9I | TTAA | 3 cut(s) | 51, 141, 197 |
| TscAI | CASTG | 2 cut(s) | 42, 275 |
| TseI | GCWGC | 1 cut(s) | 176 |
| TspRI | CASTG | 2 cut(s) | 42, 275 |
| VspI | ATTAAT | 1 cut(s) | 51 |
| XapI | RAATTY | 1 cut(s) | 184 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 39 |