Transcription initiation factor TFIID
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73960 AT1G73960 |
| fragaria_vesca | FvH4_5g12730 |
| malus_domestica | MD06G1210800.v1.1 MD06G1211000.v1.1 MD14G1221500.v1.1 MD14G1221600.v1.1 |
| prunus_persica | Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 Prupe.5G217000_v2.0.a1 |
| pyrus_communis | pycom06g18830 pycom14g18330 |
| rosa_chinensis | RchiOBHm_Chr7g0184581 |
| rosa_laevigata | RLG00000003716 RLG00000004966 RLG00000020303 |
| rosa_multiflora | Rmu_ssc0000289.1_g000035 |
| rosa_roxburghii | Rroxscaffold_3G00269500 Rroxscaffold_7G00196400 |
| rosa_rugosa | Rorug06G0007300 Rorug07G0060900 |
| rosa_samantha | Rh2BG075800 Rh2CG077900 Rh5DG337600 Rh5DG495400 Rh6AG042200 Rh6AG254600 Rh7AG079100 Rh7BG068200 Rh7BG189600 Rh7CG069000 Rh7DG068300 Rh7DG191200 Rh7DG191900 |
| rosa_wichuraiana | Rw7G005620 Rw7G016350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 879, 2211 |
| AarI | CACCTGC | 1 cut(s) | 2779 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2012 |
| AatII | GACGTC | 2 cut(s) | 96, 2777 |
| Acc36I | ACCTGC | 1 cut(s) | 2779 |
| AccB1I | GGYRCC | 2 cut(s) | 1099, 3617 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 149, 1757 |
| AccBSI | CCGCTC | 1 cut(s) | 4060 |
| AccI | GTMKAC | 3 cut(s) | 201, 2188, 2899 |
| AccII | CGCG | 4 cut(s) | 2141, 2625, 2784, 3969 |
| AcoI | YGGCCR | 2 cut(s) | 2799, 4021 |
| AcuI | CTGAAG | 2 cut(s) | 1620, 2516 |
| AcyI | GRCGYC | 2 cut(s) | 93, 2774 |
| AfaI | GTAC | 9 cut(s) | 119, 1444, 1729, 1977, 2279, 2381, 3882, 4134, 4300 |
| AfeI | AGCGCT | 1 cut(s) | 736 |
| AflIII | ACRYGT | 1 cut(s) | 807 |
| AgeI | ACCGGT | 1 cut(s) | 4201 |
| AhlI | ACTAGT | 1 cut(s) | 3548 |
| AjnI | CCWGG | 5 cut(s) | 669, 1690, 3221, 3310, 4253 |
| Alw21I | GWGCWC | 7 cut(s) | 296, 562, 2698, 3271, 3301, 3391, 3797 |
| Alw26I | GTCTC | 6 cut(s) | 497, 1665, 2055, 2493, 2765, 3902 |
| Alw44I | GTGCAC | 2 cut(s) | 558, 3793 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1661, 1777, 2165, 3635 |
| Ama87I | CYCGRG | 3 cut(s) | 938, 1094, 4046 |
| Aor51HI | AGCGCT | 1 cut(s) | 736 |
| ApaI | GGGCCC | 1 cut(s) | 57 |
| ApaLI | GTGCAC | 2 cut(s) | 558, 3793 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2001, 2033 |
| AseI | ATTAAT | 4 cut(s) | 822, 1989, 2432, 3930 |
| AsiGI | ACCGGT | 1 cut(s) | 4201 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 774, 1374, 1509, 2093 |
| AspA2I | CCTAGG | 1 cut(s) | 3917 |
| AspLEI | GCGC | 7 cut(s) | 737, 763, 2502, 3749, 4068, 4127, 4264 |
| AspS9I | GGNCC | 7 cut(s) | 53, 54, 139, 349, 1364, 2574, 4030 |
| AsuC2I | CCSGG | 3 cut(s) | 52, 1934, 3724 |
| AsuHPI | GGTGA | 8 cut(s) | 218, 292, 2803, 3041, 3338, 3575, 3679, 3837 |
| AsuII | TTCGAA | 2 cut(s) | 222, 2128 |
| AsuNHI | GCTAGC | 1 cut(s) | 3758 |
| AvaI | CYCGRG | 3 cut(s) | 938, 1094, 4046 |
| AvaII | GGWCC | 3 cut(s) | 139, 349, 1364 |
| AvrII | CCTAGG | 1 cut(s) | 3917 |
| BaeGI | GKGCMC | 3 cut(s) | 57, 562, 3797 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2533, 2566 |
| BalI | TGGCCA | 1 cut(s) | 4023 |
| BamHI | GGATCC | 1 cut(s) | 3719 |
| BanI | GGYRCC | 2 cut(s) | 1099, 3617 |
| BanII | GRGCYC | 5 cut(s) | 57, 296, 939, 1411, 1714 |
| BauI | CACGAG | 1 cut(s) | 1036 |
| BbsI | GAAGAC | 3 cut(s) | 36, 432, 2407 |
| Bbv12I | GWGCWC | 7 cut(s) | 296, 562, 2698, 3271, 3301, 3391, 3797 |
| BbvCI | CCTCAGC | 3 cut(s) | 1547, 3512, 3828 |
| BceAI | ACGGC | 2 cut(s) | 569, 2786 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3337, 3371 |
| BciT130I | CCWGG | 5 cut(s) | 671, 1692, 3223, 3312, 4255 |
| BciVI | GTATCC | 1 cut(s) | 2164 |
| BclI | TGATCA | 3 cut(s) | 363, 1021, 1735 |
| BcnI | CCSGG | 3 cut(s) | 52, 1934, 3724 |
| BcoDI | GTCTC | 6 cut(s) | 497, 1665, 2055, 2493, 2765, 3902 |
| BcuI | ACTAGT | 1 cut(s) | 3548 |
| BfmI | CTRYAG | 3 cut(s) | 846, 2352, 2850 |
| BfoI | RGCGCY | 3 cut(s) | 738, 4069, 4128 |
| BfuAI | ACCTGC | 1 cut(s) | 2779 |
| BfuI | GTATCC | 1 cut(s) | 2164 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 308, 4029 |
| BlnI | CCTAGG | 1 cut(s) | 3917 |
| BmcAI | AGTACT | 1 cut(s) | 2279 |
| Bme1390I | CCNGG | 8 cut(s) | 52, 671, 1692, 1934, 3223, 3312, 3724, 4255 |
| Bme18I | GGWCC | 3 cut(s) | 139, 349, 1364 |
| BmeT110I | CYCGRG | 3 cut(s) | 938, 1094, 4046 |
| BmgT120I | GGNCC | 7 cut(s) | 53, 54, 139, 349, 1364, 2574, 4030 |
| BmrFI | CCNGG | 8 cut(s) | 52, 671, 1692, 1934, 3223, 3312, 3724, 4255 |
| BmtI | GCTAGC | 1 cut(s) | 3762 |
| BpiI | GAAGAC | 3 cut(s) | 36, 432, 2407 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2863, 2895 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1547, 3512, 3674, 3828 |
| Bpu14I | TTCGAA | 2 cut(s) | 222, 2128 |
| BpuEI | CTTGAG | 5 cut(s) | 356, 978, 1505, 2309, 3710 |
| BpuMI | CCSGG | 3 cut(s) | 52, 1934, 3724 |
| BsaAI | YACGTR | 1 cut(s) | 1604 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1703 |
| BsaHI | GRCGYC | 2 cut(s) | 93, 2774 |
| BsaJI | CCNNGG | 7 cut(s) | 1095, 2109, 2782, 3222, 3252, 3917, 4140 |
| BsaWI | WCCGGW | 3 cut(s) | 1191, 4201, 4295 |
| Bse118I | RCCGGY | 1 cut(s) | 4201 |
| Bse1I | ACTGG | 4 cut(s) | 658, 728, 1742, 2049 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1703 |
| BseBI | CCWGG | 5 cut(s) | 671, 1692, 3223, 3312, 4255 |
| BseDI | CCNNGG | 7 cut(s) | 1095, 2109, 2782, 3222, 3252, 3917, 4140 |
| BseJI | GATNNNNATC | 1 cut(s) | 1703 |
| BseMII | CTCAG | 6 cut(s) | 114, 1538, 2157, 2265, 3503, 3842 |
| BseNI | ACTGG | 4 cut(s) | 658, 728, 1742, 2049 |
| BseRI | GAGGAG | 2 cut(s) | 280, 684 |
| BseSI | GKGCMC | 3 cut(s) | 57, 562, 3797 |
| BseYI | CCCAGC | 3 cut(s) | 276, 1133, 1518 |
| BsgI | GTGCAG | 2 cut(s) | 452, 3804 |
| Bsh1236I | CGCG | 4 cut(s) | 2141, 2625, 2784, 3969 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4206 |
| BshNI | GGYRCC | 2 cut(s) | 1099, 3617 |
| BshTI | ACCGGT | 1 cut(s) | 4201 |
| BsiEI | CGRYCG | 1 cut(s) | 4206 |
| BsiHKAI | GWGCWC | 7 cut(s) | 296, 562, 2698, 3271, 3301, 3391, 3797 |
| BsiHKCI | CYCGRG | 3 cut(s) | 938, 1094, 4046 |
| BsiSI | CCGG | 8 cut(s) | 51, 390, 1192, 1934, 2973, 3724, 4202, 4296 |
| BslFI | GGGAC | 4 cut(s) | 125, 335, 1377, 3239 |
| BsmAI | GTCTC | 6 cut(s) | 497, 1665, 2055, 2493, 2765, 3902 |
| BsmBI | CGTCTC | 2 cut(s) | 2493, 2765 |
| BsmFI | GGGAC | 4 cut(s) | 125, 335, 1377, 3239 |
| BsoBI | CYCGRG | 3 cut(s) | 938, 1094, 4046 |
| Bsp119I | TTCGAA | 2 cut(s) | 222, 2128 |
| Bsp120I | GGGCCC | 1 cut(s) | 53 |
| Bsp1407I | TGTACA | 1 cut(s) | 1975 |
| BspCNI | CTCAG | 6 cut(s) | 115, 1539, 2158, 2266, 3504, 3841 |
| BspFNI | CGCG | 4 cut(s) | 2141, 2625, 2784, 3969 |
| BspHI | TCATGA | 1 cut(s) | 520 |
| BspMAI | CTGCAG | 1 cut(s) | 2854 |
| BspMI | ACCTGC | 1 cut(s) | 2779 |
| BspOI | GCTAGC | 1 cut(s) | 3762 |
| BspT104I | TTCGAA | 2 cut(s) | 222, 2128 |
| BspT107I | GGYRCC | 2 cut(s) | 1099, 3617 |
| BsrBI | CCGCTC | 1 cut(s) | 4060 |
| BsrFI | RCCGGY | 1 cut(s) | 4201 |
| BsrGI | TGTACA | 1 cut(s) | 1975 |
| BsrI | ACTGG | 4 cut(s) | 658, 728, 1742, 2049 |
| BssAI | RCCGGY | 1 cut(s) | 4201 |
| BssECI | CCNNGG | 7 cut(s) | 1095, 2109, 2782, 3222, 3252, 3917, 4140 |
| BssNI | GRCGYC | 2 cut(s) | 93, 2774 |
| BssSI | CACGAG | 1 cut(s) | 1036 |
| BssT1I | CCWWGG | 3 cut(s) | 2109, 3252, 3917 |
| Bst2BI | CACGAG | 1 cut(s) | 1036 |
| Bst2UI | CCWGG | 5 cut(s) | 671, 1692, 3223, 3312, 4255 |
| Bst6I | CTCTTC | 3 cut(s) | 2496, 2763, 3966 |
| BstACI | GRCGYC | 2 cut(s) | 93, 2774 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1211, 1646, 3755 |
| BstAUI | TGTACA | 1 cut(s) | 1975 |
| BstBAI | YACGTR | 1 cut(s) | 1604 |
| BstBI | TTCGAA | 2 cut(s) | 222, 2128 |
| BstDEI | CTNAG | 8 cut(s) | 123, 1439, 1547, 2166, 2274, 3512, 3674, 3828 |
| BstDSI | CCRYGG | 2 cut(s) | 2782, 4140 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4073 |
| BstFNI | CGCG | 4 cut(s) | 2141, 2625, 2784, 3969 |
| BstH2I | RGCGCY | 3 cut(s) | 738, 4069, 4128 |
| BstHHI | GCGC | 7 cut(s) | 737, 763, 2502, 3749, 4068, 4127, 4264 |
| BstMAI | GTCTC | 6 cut(s) | 497, 1665, 2055, 2493, 2765, 3902 |
| BstMCI | CGRYCG | 1 cut(s) | 4206 |
| BstNI | CCWGG | 5 cut(s) | 671, 1692, 3223, 3312, 4255 |
| BstNSI | RCATGY | 3 cut(s) | 811, 1891, 2810 |
| BstSCI | CCNGG | 8 cut(s) | 50, 669, 1690, 1932, 3221, 3310, 3722, 4253 |
| BstSFI | CTRYAG | 3 cut(s) | 846, 2352, 2850 |
| BstSLI | GKGCMC | 3 cut(s) | 57, 562, 3797 |
| BstUI | CGCG | 4 cut(s) | 2141, 2625, 2784, 3969 |
| BstV2I | GAAGAC | 3 cut(s) | 36, 432, 2407 |
| BstX2I | RGATCY | 7 cut(s) | 1419, 1433, 2837, 3208, 3719, 3838, 4338 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1917, 4228 |
| BstYI | RGATCY | 7 cut(s) | 1419, 1433, 2837, 3208, 3719, 3838, 4338 |
| BsuI | GTATCC | 1 cut(s) | 2164 |
| BtgI | CCRYGG | 2 cut(s) | 2782, 4140 |
| BtgZI | GCGATG | 2 cut(s) | 270, 3777 |
| BtsI | GCAGTG | 5 cut(s) | 1541, 1602, 3795, 3797, 3821 |
| BtsIMutI | CAGTG | 9 cut(s) | 621, 651, 1541, 1602, 2042, 3795, 3797, 3821, 4346 |
| BveI | ACCTGC | 1 cut(s) | 2779 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1661, 1777, 2165, 3635 |
| CciI | TCATGA | 1 cut(s) | 520 |
| CfoI | GCGC | 7 cut(s) | 737, 763, 2502, 3749, 4068, 4127, 4264 |
| Cfr10I | RCCGGY | 1 cut(s) | 4201 |
| Cfr13I | GGNCC | 7 cut(s) | 53, 54, 139, 349, 1364, 2574, 4030 |
| Cfr42I | CCGCGG | 1 cut(s) | 2785 |
| CseI | GACGC | 4 cut(s) | 41, 92, 1478, 1821 |
| CsiI | ACCWGGT | 1 cut(s) | 669 |
| Csp6I | GTAC | 9 cut(s) | 118, 1443, 1728, 1976, 2278, 2380, 3881, 4133, 4299 |
| CspAI | ACCGGT | 1 cut(s) | 4201 |
| CviQI | GTAC | 9 cut(s) | 118, 1443, 1728, 1976, 2278, 2380, 3881, 4133, 4299 |
| DdeI | CTNAG | 8 cut(s) | 123, 1439, 1547, 2166, 2274, 3512, 3674, 3828 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2012 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2012 |
| EaeI | YGGCCR | 2 cut(s) | 2799, 4021 |
| Eam1104I | CTCTTC | 3 cut(s) | 2496, 2763, 3966 |
| EarI | CTCTTC | 3 cut(s) | 2496, 2763, 3966 |
| EciI | GGCGGA | 3 cut(s) | 53, 1632, 3968 |
| Ecl136II | GAGCTC | 1 cut(s) | 294 |
| Eco130I | CCWWGG | 3 cut(s) | 2109, 3252, 3917 |
| Eco147I | AGGCCT | 2 cut(s) | 2114, 4258 |
| Eco24I | GRGCYC | 5 cut(s) | 57, 296, 939, 1411, 1714 |
| Eco32I | GATATC | 2 cut(s) | 747, 2656 |
| Eco47I | GGWCC | 3 cut(s) | 139, 349, 1364 |
| Eco47III | AGCGCT | 1 cut(s) | 736 |
| Eco53kI | GAGCTC | 1 cut(s) | 294 |
| Eco57I | CTGAAG | 2 cut(s) | 1620, 2516 |
| Eco88I | CYCGRG | 3 cut(s) | 938, 1094, 4046 |
| EcoICRI | GAGCTC | 1 cut(s) | 294 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4073 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2574 |
| EcoRI | GAATTC | 1 cut(s) | 2711 |
| EcoRII | CCWGG | 5 cut(s) | 669, 1690, 3221, 3310, 4253 |
| EcoRV | GATATC | 2 cut(s) | 747, 2656 |
| EcoT14I | CCWWGG | 3 cut(s) | 2109, 3252, 3917 |
| EcoT22I | ATGCAT | 1 cut(s) | 1295 |
| EcoT38I | GRGCYC | 5 cut(s) | 57, 296, 939, 1411, 1714 |
| ErhI | CCWWGG | 3 cut(s) | 2109, 3252, 3917 |
| Esp3I | CGTCTC | 2 cut(s) | 2493, 2765 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3434, 3466 |
| FaqI | GGGAC | 4 cut(s) | 125, 335, 1377, 3239 |
| FauI | CCCGC | 5 cut(s) | 240, 1193, 2777, 3962, 4008 |
| FauNDI | CATATG | 1 cut(s) | 706 |
| FbaI | TGATCA | 3 cut(s) | 363, 1021, 1735 |
| FblI | GTMKAC | 3 cut(s) | 201, 2188, 2899 |
| FriOI | GRGCYC | 5 cut(s) | 57, 296, 939, 1411, 1714 |
| GlaI | GCGC | 7 cut(s) | 736, 762, 2501, 3748, 4067, 4126, 4263 |
| GsaI | CCCAGC | 3 cut(s) | 280, 1137, 1522 |
| HaeII | RGCGCY | 3 cut(s) | 738, 4069, 4128 |
| HapII | CCGG | 8 cut(s) | 51, 390, 1192, 1934, 2973, 3724, 4202, 4296 |
| HgaI | GACGC | 4 cut(s) | 41, 92, 1478, 1821 |
| HhaI | GCGC | 7 cut(s) | 737, 763, 2502, 3749, 4068, 4127, 4264 |
| Hin1I | GRCGYC | 2 cut(s) | 93, 2774 |
| Hin6I | GCGC | 7 cut(s) | 735, 761, 2500, 3747, 4066, 4125, 4262 |
| HinP1I | GCGC | 7 cut(s) | 735, 761, 2500, 3747, 4066, 4125, 4262 |
| HincII | GTYRAC | 4 cut(s) | 202, 318, 2080, 3700 |
| HindII | GTYRAC | 4 cut(s) | 202, 318, 2080, 3700 |
| HindIII | AAGCTT | 3 cut(s) | 833, 1799, 3040 |
| HpaI | GTTAAC | 2 cut(s) | 2080, 3700 |
| HpaII | CCGG | 8 cut(s) | 51, 390, 1192, 1934, 2973, 3724, 4202, 4296 |
| HphI | GGTGA | 8 cut(s) | 218, 292, 2803, 3041, 3338, 3575, 3679, 3837 |
| Hpy99I | CGWCG | 6 cut(s) | 62, 95, 98, 108, 206, 2021 |
| HpyCH4IV | ACGT | 4 cut(s) | 93, 1603, 1730, 2774 |
| HpyF3I | CTNAG | 8 cut(s) | 123, 1439, 1547, 2166, 2274, 3512, 3674, 3828 |
| HpySE526I | ACGT | 4 cut(s) | 93, 1603, 1730, 2774 |
| Hsp92I | GRCGYC | 2 cut(s) | 93, 2774 |
| HspAI | GCGC | 7 cut(s) | 735, 761, 2500, 3747, 4066, 4125, 4262 |
| Ksp22I | TGATCA | 3 cut(s) | 363, 1021, 1735 |
| KspAI | GTTAAC | 2 cut(s) | 2080, 3700 |
| KspI | CCGCGG | 1 cut(s) | 2785 |
| MabI | ACCWGGT | 1 cut(s) | 669 |
| MaeII | ACGT | 4 cut(s) | 93, 1603, 1730, 2774 |
| MaeIII | GTNAC | 3 cut(s) | 162, 280, 1599 |
| MbiI | CCGCTC | 1 cut(s) | 4060 |
| MfeI | CAATTG | 3 cut(s) | 367, 1629, 2034 |
| MflI | RGATCY | 7 cut(s) | 1419, 1433, 2837, 3208, 3719, 3838, 4338 |
| MlsI | TGGCCA | 1 cut(s) | 4023 |
| MluNI | TGGCCA | 1 cut(s) | 4023 |
| MlyI | GAGTC | 5 cut(s) | 1913, 2057, 2099, 2235, 2447 |
| MmeI | TCCRAC | 3 cut(s) | 1977, 2425, 4245 |
| Mox20I | TGGCCA | 1 cut(s) | 4023 |
| Mph1103I | ATGCAT | 1 cut(s) | 1295 |
| MroXI | GAANNNNTTC | 4 cut(s) | 774, 1374, 1509, 2093 |
| MscI | TGGCCA | 1 cut(s) | 4023 |
| MslI | CAYNNNNRTG | 3 cut(s) | 249, 1915, 3027 |
| Msp20I | TGGCCA | 1 cut(s) | 4023 |
| MspA1I | CMGCKG | 3 cut(s) | 1774, 2784, 3245 |
| MspI | CCGG | 8 cut(s) | 51, 390, 1192, 1934, 2973, 3724, 4202, 4296 |
| MspR9I | CCNGG | 8 cut(s) | 52, 671, 1692, 1934, 3223, 3312, 3724, 4255 |
| MunI | CAATTG | 3 cut(s) | 367, 1629, 2034 |
| MvaI | CCWGG | 5 cut(s) | 671, 1692, 3223, 3312, 4255 |
| MvnI | CGCG | 4 cut(s) | 2141, 2625, 2784, 3969 |
| NciI | CCSGG | 3 cut(s) | 52, 1934, 3724 |
| NdeI | CATATG | 1 cut(s) | 706 |
| NheI | GCTAGC | 1 cut(s) | 3758 |
| NmeAIII | GCCGAG | 1 cut(s) | 315 |
| NmuCI | GTSAC | 1 cut(s) | 280 |
| NsiI | ATGCAT | 1 cut(s) | 1295 |
| NspI | RCATGY | 3 cut(s) | 811, 1891, 2810 |
| NspV | TTCGAA | 2 cut(s) | 222, 2128 |
| PaeI | GCATGC | 1 cut(s) | 2810 |
| PagI | TCATGA | 1 cut(s) | 520 |
| PaqCI | CACCTGC | 1 cut(s) | 2779 |
| PceI | AGGCCT | 2 cut(s) | 2114, 4258 |
| PciI | ACATGT | 1 cut(s) | 807 |
| PdmI | GAANNNNTTC | 4 cut(s) | 774, 1374, 1509, 2093 |
| PfeI | GAWTC | 5 cut(s) | 1370, 1625, 1651, 3803, 3956 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 149, 1757 |
| PfoI | TCCNGGA | 1 cut(s) | 3722 |
| PinAI | ACCGGT | 1 cut(s) | 4201 |
| PleI | GAGTC | 5 cut(s) | 1912, 2056, 2099, 2235, 2446 |
| PpsI | GAGTC | 5 cut(s) | 1912, 2056, 2099, 2235, 2446 |
| Ppu21I | YACGTR | 1 cut(s) | 1604 |
| PscI | ACATGT | 1 cut(s) | 807 |
| PshBI | ATTAAT | 4 cut(s) | 822, 1989, 2432, 3930 |
| PsiI | TTATAA | 2 cut(s) | 879, 2211 |
| Psp124BI | GAGCTC | 1 cut(s) | 296 |
| Psp6I | CCWGG | 5 cut(s) | 669, 1690, 3221, 3310, 4253 |
| PspFI | CCCAGC | 3 cut(s) | 276, 1133, 1518 |
| PspGI | CCWGG | 5 cut(s) | 669, 1690, 3221, 3310, 4253 |
| PspOMI | GGGCCC | 1 cut(s) | 53 |
| PspPI | GGNCC | 7 cut(s) | 53, 54, 139, 349, 1364, 2574, 4030 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2658, 2690 |
| PstI | CTGCAG | 1 cut(s) | 2854 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1661, 1777, 2165, 3635 |
| PsuI | RGATCY | 7 cut(s) | 1419, 1433, 2837, 3208, 3719, 3838, 4338 |
| PvuII | CAGCTG | 2 cut(s) | 1774, 3245 |
| RsaI | GTAC | 9 cut(s) | 119, 1444, 1729, 1977, 2279, 2381, 3882, 4134, 4300 |
| RsaNI | GTAC | 9 cut(s) | 118, 1443, 1728, 1976, 2278, 2380, 3881, 4133, 4299 |
| RseI | CAYNNNNRTG | 3 cut(s) | 249, 1915, 3027 |
| SacI | GAGCTC | 1 cut(s) | 296 |
| SacII | CCGCGG | 1 cut(s) | 2785 |
| SalI | GTCGAC | 1 cut(s) | 200 |
| Sau96I | GGNCC | 7 cut(s) | 53, 54, 139, 349, 1364, 2574, 4030 |
| ScaI | AGTACT | 1 cut(s) | 2279 |
| SchI | GAGTC | 5 cut(s) | 1913, 2057, 2099, 2235, 2447 |
| ScrFI | CCNGG | 8 cut(s) | 52, 671, 1692, 1934, 3223, 3312, 3724, 4255 |
| SexAI | ACCWGGT | 1 cut(s) | 669 |
| SfcI | CTRYAG | 3 cut(s) | 846, 2352, 2850 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 4029 |
| Sfr303I | CCGCGG | 1 cut(s) | 2785 |
| SfuI | TTCGAA | 2 cut(s) | 222, 2128 |
| SgrBI | CCGCGG | 1 cut(s) | 2785 |
| SinI | GGWCC | 3 cut(s) | 139, 349, 1364 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 249, 1915, 3027 |
| SmlI | CTYRAG | 5 cut(s) | 335, 993, 1484, 2288, 3689 |
| SmoI | CTYRAG | 5 cut(s) | 335, 993, 1484, 2288, 3689 |
| SpeI | ACTAGT | 1 cut(s) | 3548 |
| SphI | GCATGC | 1 cut(s) | 2810 |
| SseBI | AGGCCT | 2 cut(s) | 2114, 4258 |
| SspI | AATATT | 1 cut(s) | 2759 |
| SstI | GAGCTC | 1 cut(s) | 296 |
| StuI | AGGCCT | 2 cut(s) | 2114, 4258 |
| StyD4I | CCNGG | 8 cut(s) | 50, 669, 1690, 1932, 3221, 3310, 3722, 4253 |
| StyI | CCWWGG | 3 cut(s) | 2109, 3252, 3917 |
| TaiI | ACGT | 4 cut(s) | 96, 1606, 1733, 2777 |
| TaqI | TCGA | 9 cut(s) | 90, 96, 201, 222, 830, 2128, 2436, 3768, 4206 |
| TaqII | GACCGA | 2 cut(s) | 230, 2548 |
| TatI | WGTACW | 4 cut(s) | 1975, 2277, 2379, 3880 |
| TauI | GCSGC | 3 cut(s) | 311, 2141, 2983 |
| TfiI | GAWTC | 5 cut(s) | 1370, 1625, 1651, 3803, 3956 |
| TscAI | CASTG | 9 cut(s) | 628, 658, 1548, 1602, 2049, 3797, 3802, 3828, 4353 |
| TseFI | GTSAC | 1 cut(s) | 280 |
| Tsp45I | GTSAC | 1 cut(s) | 280 |
| TspDTI | ATGAA | 9 cut(s) | 441, 509, 1023, 1194, 1949, 2781, 3011, 3064, 3930 |
| TspGWI | ACGGA | 3 cut(s) | 1412, 3520, 4157 |
| TspRI | CASTG | 9 cut(s) | 628, 658, 1548, 1602, 2049, 3797, 3802, 3828, 4353 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 149, 1757 |
| VneI | GTGCAC | 2 cut(s) | 558, 3793 |
| VpaK11BI | GGWCC | 3 cut(s) | 139, 349, 1364 |
| VspI | ATTAAT | 4 cut(s) | 822, 1989, 2432, 3930 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4073 |
| XbaI | TCTAGA | 1 cut(s) | 1882 |
| XceI | RCATGY | 3 cut(s) | 811, 1891, 2810 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2831, 3259 |
| XmaJI | CCTAGG | 1 cut(s) | 3917 |
| XmiI | GTMKAC | 3 cut(s) | 201, 2188, 2899 |
| XmnI | GAANNNNTTC | 4 cut(s) | 774, 1374, 1509, 2093 |
| ZraI | GACGTC | 2 cut(s) | 94, 2775 |
| ZrmI | AGTACT | 1 cut(s) | 2279 |
| Zsp2I | ATGCAT | 1 cut(s) | 1295 |