Rh7DG191900
HSP70 Family

Heat shock cognate 70 kDa

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0003127
Physical Location & Seq
Forward (+)
17902112 .. 17927004
24893 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG191900.1

Sequence Viewer

Length: 945 bp
ATGGCTATGGCTACAAAATGTGAGGGTCCAACGATTGGTATCGACCTCGGAACAACTTACTCGTGTGTGGGAGTTTGGCAACACGGTCGTGTTGAGATTATAGCTAATGATCAGGGCAATAGAACAACACCGTCTTACGTTGCTTTTACGAACAATGGGCGTTTAATTGGTGATGCAGCCAAGAATCAAGTATCCAAGAACCCCACCAACACTAAAACGGAGGCTATGGTTGCATTAGAAAACTATGCAACCAACAAGATGGACACAGTTCATAATCGCTCAAACCTCAACCAAGAAGACAAGAAAAGAATCGTGGATGCGGTTGAAAAAGTCATTGAGTGGCTTGATGAGAATGAGAATCATCTTGCTGAATGTGAAGAATATGAGGATAAGCTGAAAAAGCTCGATAACTTGTGCAACTGTGATGGGAATCTGAAGGGTAAGGCAATGCTTGAAATGCAGGCTACTGAAGGAGAACCATCACTGCCCTGGGATATTAATCAGTTGGAGAAGGACAAAGATGTTGTTGCTCAGGCACAAGCAATTGCAATGCTTGAGTCCTTACCTCAGCTTCCATTTTGTGTTGTTAATGCTCTGCATAACTTTCTTACTGACTCCAAGGCAGCTGGAAATTCAGAGATATTAAAGGTTCGTAAGATGCTGAAAGATGCGGCACATCAGAAGGAGAAACTTGAAGGAGAAATGGCAACACTTCACTATAAATTACAGAGCAAGCTAAGGGCAGAAGGTGGCATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCATCCGGATGTTCTTGCACAAGTTGCTTGTGGGATTGCAAATTTCACAAAATTCGAGTCTAGGGCATCTACACAAGAAACAAATGTAAAAAACATGATCAGTGGTGGTGCCTCGTGGGAGCTTGGTCGCTTTCCCAAGACTGTTCATGCCAAGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

314

Amino Acids

34.63

Weight (kDa)

6.11

Isoelectric Point (pI)

28.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 12 - 71 2.4e-25 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 893
AccB7I CCANNNNNTGG 1 cut(s) 35
AccIII TCCGGA 1 cut(s) 790
AciI CCGC 2 cut(s) 320, 671
AcsI RAATTY 3 cut(s) 631, 826, 836
AcuI CTGAAG 2 cut(s) 455, 489
AfiI CCNNNNNNNGG 1 cut(s) 35
AgsI TTSAA 3 cut(s) 326, 455, 695
AjnI CCWGG 1 cut(s) 488
AleI CACNNNNGTG 1 cut(s) 87
AluBI AGCT 7 cut(s) 104, 394, 403, 571, 626, 736, 907
AluI AGCT 7 cut(s) 104, 394, 403, 571, 626, 736, 907
Aor13HI TCCGGA 1 cut(s) 790
ApeKI GCWGC 2 cut(s) 176, 623
ApoI RAATTY 3 cut(s) 631, 826, 836
ArsI GACNNNNNNTTYG 2 cut(s) 827, 859
AseI ATTAAT 1 cut(s) 498
AspS9I GGNCC 1 cut(s) 26
AsuHPI GGTGA 1 cut(s) 182
AvaII GGWCC 1 cut(s) 26
BanI GGYRCC 1 cut(s) 893
BauI CACGAG 2 cut(s) 61, 898
BbsI GAAGAC 1 cut(s) 303
BbvCI CCTCAGC 1 cut(s) 567
BbvI GCAGC 2 cut(s) 188, 635
BccI CCATC 3 cut(s) 253, 419, 487
BcgI CGANNNNNNTGC 2 cut(s) 68, 102
BciT130I CCWGG 1 cut(s) 490
BciVI GTATCC 1 cut(s) 202
BclI TGATCA 2 cut(s) 109, 882
BfaI CTAG 2 cut(s) 767, 846
BfuI GTATCC 1 cut(s) 202
BisI GCNGC 3 cut(s) 177, 624, 672
BlsI GCNGC 3 cut(s) 178, 625, 673
Bme1390I CCNGG 1 cut(s) 490
Bme18I GGWCC 1 cut(s) 26
BmgT120I GGNCC 1 cut(s) 26
BmiI GGNNCC 2 cut(s) 27, 895
BmrFI CCNGG 1 cut(s) 490
BmsI GCATC 6 cut(s) 163, 307, 648, 658, 796, 860
BpiI GAAGAC 1 cut(s) 303
Bpu10I CCTNAGC 3 cut(s) 531, 567, 737
BpuEI CTTGAG 1 cut(s) 575
BsaBI GATNNNNATC 3 cut(s) 38, 429, 498
BsaJI CCNNGG 4 cut(s) 46, 488, 489, 618
BsaWI WCCGGW 1 cut(s) 790
Bsc4I CCNNNNNNNGG 1 cut(s) 35
Bse3DI GCAATG 3 cut(s) 453, 555, 761
Bse8I GATNNNNATC 3 cut(s) 38, 429, 498
BseAI TCCGGA 1 cut(s) 790
BseBI CCWGG 1 cut(s) 490
BseDI CCNNGG 4 cut(s) 46, 488, 489, 618
BseGI GGATG 3 cut(s) 322, 787, 799
BseJI GATNNNNATC 3 cut(s) 38, 429, 498
BseLI CCNNNNNNNGG 1 cut(s) 35
BseMI GCAATG 3 cut(s) 453, 555, 761
BseMII CTCAG 2 cut(s) 545, 581
BseXI GCAGC 2 cut(s) 188, 635
Bsh1285I CGRYCG 1 cut(s) 88
BshNI GGYRCC 1 cut(s) 893
BsiEI CGRYCG 1 cut(s) 88
BsiSI CCGG 1 cut(s) 791
BslI CCNNNNNNNGG 1 cut(s) 35
Bsp13I TCCGGA 1 cut(s) 790
Bsp143I GATC 2 cut(s) 109, 882
BspACI CCGC 2 cut(s) 320, 671
BspCNI CTCAG 2 cut(s) 544, 580
BspEI TCCGGA 1 cut(s) 790
BspLI GGNNCC 2 cut(s) 27, 895
BspT107I GGYRCC 1 cut(s) 893
BsrDI GCAATG 3 cut(s) 453, 555, 761
BssECI CCNNGG 4 cut(s) 46, 488, 489, 618
BssMI GATC 2 cut(s) 109, 882
BssSI CACGAG 2 cut(s) 61, 898
BssT1I CCWWGG 1 cut(s) 618
Bst2BI CACGAG 2 cut(s) 61, 898
Bst2UI CCWGG 1 cut(s) 490
Bst4CI ACNGT 5 cut(s) 86, 132, 268, 422, 928
BstAPI GCANNNNNTGC 1 cut(s) 809
BstC8I GCNNGC 2 cut(s) 462, 734
BstDEI CTNAG 3 cut(s) 531, 567, 737
BstF5I GGATG 3 cut(s) 322, 787, 799
BstKTI GATC 2 cut(s) 112, 885
BstMBI GATC 2 cut(s) 109, 882
BstMCI CGRYCG 1 cut(s) 88
BstMWI GCNNNNNNNGC 4 cut(s) 230, 400, 457, 809
BstNI CCWGG 1 cut(s) 490
BstSCI CCNGG 1 cut(s) 488
BstV1I GCAGC 2 cut(s) 188, 635
BstV2I GAAGAC 1 cut(s) 303
BstXI CCANNNNNNTGG 1 cut(s) 259
BsuI GTATCC 1 cut(s) 202
BtsCI GGATG 3 cut(s) 322, 787, 799
BtsI GCAGTG 1 cut(s) 482
BtsIMutI CAGTG 2 cut(s) 482, 892
Cac8I GCNNGC 2 cut(s) 462, 734
Cfr13I GGNCC 1 cut(s) 26
CviAII CATG 2 cut(s) 880, 932
DdeI CTNAG 3 cut(s) 531, 567, 737
DpnI GATC 2 cut(s) 111, 884
DpnII GATC 2 cut(s) 109, 882
Eco130I CCWWGG 1 cut(s) 618
Eco47I GGWCC 1 cut(s) 26
Eco57I CTGAAG 2 cut(s) 455, 489
EcoRII CCWGG 1 cut(s) 488
EcoT14I CCWWGG 1 cut(s) 618
ErhI CCWWGG 1 cut(s) 618
FaeI CATG 2 cut(s) 883, 935
FatI CATG 2 cut(s) 879, 931
FbaI TGATCA 2 cut(s) 109, 882
Fnu4HI GCNGC 3 cut(s) 177, 624, 672
FokI GGATG 3 cut(s) 329, 774, 806
Fsp4HI GCNGC 3 cut(s) 177, 624, 672
FspBI CTAG 2 cut(s) 767, 846
GluI GCNGC 3 cut(s) 177, 624, 672
HapII CCGG 1 cut(s) 791
Hin1II CATG 2 cut(s) 883, 935
HinfI GANTC 7 cut(s) 184, 309, 358, 430, 557, 614, 842
HpaII CCGG 1 cut(s) 791
HphI GGTGA 1 cut(s) 182
Hpy188I TCNGA 5 cut(s) 50, 435, 637, 681, 779
Hpy188III TCNNGA 1 cut(s) 791
HpyAV CCTTC 6 cut(s) 430, 464, 505, 676, 689, 740
HpyCH4III ACNGT 5 cut(s) 86, 132, 268, 422, 928
HpyCH4IV ACGT 1 cut(s) 138
HpyCH4V TGCA 9 cut(s) 176, 233, 248, 417, 460, 548, 598, 803, 824
HpyF10VI GCNNNNNNNGC 4 cut(s) 230, 400, 457, 809
HpyF3I CTNAG 3 cut(s) 531, 567, 737
HpySE526I ACGT 1 cut(s) 138
Hsp92II CATG 2 cut(s) 883, 935
Kpn2I TCCGGA 1 cut(s) 790
Ksp22I TGATCA 2 cut(s) 109, 882
Kzo9I GATC 2 cut(s) 109, 882
LmnI GCTCC 1 cut(s) 904
LpnPI CCDG 7 cut(s) 98, 446, 475, 502, 518, 612, 804
Lsp1109I GCAGC 2 cut(s) 188, 635
LweI GCATC 6 cut(s) 163, 307, 648, 658, 796, 860
MaeI CTAG 2 cut(s) 767, 846
MaeII ACGT 1 cut(s) 138
MalI GATC 2 cut(s) 111, 884
MboI GATC 2 cut(s) 109, 882
MboII GAAGA 2 cut(s) 308, 389
MfeI CAATTG 1 cut(s) 543
MluCI AATT 6 cut(s) 165, 543, 631, 722, 826, 836
MlyI GAGTC 3 cut(s) 566, 608, 851
MmeI TCCRAC 2 cut(s) 53, 486
MnlI CCTC 7 cut(s) 16, 56, 214, 296, 379, 576, 907
MroI TCCGGA 1 cut(s) 790
MseI TTAA 5 cut(s) 164, 498, 588, 644, 756
MslI CAYNNNNRTG 2 cut(s) 87, 792
MspA1I CMGCKG 1 cut(s) 626
MspI CCGG 1 cut(s) 791
MspR9I CCNGG 1 cut(s) 490
MunI CAATTG 1 cut(s) 543
MvaI CCWGG 1 cut(s) 490
MwoI GCNNNNNNNGC 4 cut(s) 230, 400, 457, 809
NdeII GATC 2 cut(s) 109, 882
NlaIII CATG 2 cut(s) 883, 935
NlaIV GGNNCC 2 cut(s) 27, 895
OliI CACNNNNGTG 1 cut(s) 87
PasI CCCWGGG 1 cut(s) 489
PfeI GAWTC 4 cut(s) 184, 309, 358, 430
PflMI CCANNNNNTGG 1 cut(s) 35
PkrI GCNGC 3 cut(s) 178, 625, 673
PleI GAGTC 3 cut(s) 565, 608, 850
PpsI GAGTC 3 cut(s) 565, 608, 850
PshBI ATTAAT 1 cut(s) 498
Psp6I CCWGG 1 cut(s) 488
PspGI CCWGG 1 cut(s) 488
PspN4I GGNNCC 2 cut(s) 27, 895
PspPI GGNCC 1 cut(s) 26
PvuII CAGCTG 1 cut(s) 626
RseI CAYNNNNRTG 2 cut(s) 87, 792
SaqAI TTAA 5 cut(s) 164, 498, 588, 644, 756
SatI GCNGC 3 cut(s) 177, 624, 672
Sau3AI GATC 2 cut(s) 109, 882
Sau96I GGNCC 1 cut(s) 26
SchI GAGTC 3 cut(s) 566, 608, 851
ScrFI CCNGG 1 cut(s) 490
SfaNI GCATC 6 cut(s) 163, 307, 648, 658, 796, 860
SinI GGWCC 1 cut(s) 26
SmiMI CAYNNNNRTG 2 cut(s) 87, 792
SmlI CTYRAG 1 cut(s) 554
SmoI CTYRAG 1 cut(s) 554
Sse9I AATT 6 cut(s) 165, 543, 631, 722, 826, 836
SsiI CCGC 2 cut(s) 320, 671
SspMI CTAG 2 cut(s) 767, 846
StyD4I CCNGG 1 cut(s) 488
StyI CCWWGG 1 cut(s) 618
TaaI ACNGT 5 cut(s) 86, 132, 268, 422, 928
TaiI ACGT 1 cut(s) 141
TaqI TCGA 3 cut(s) 42, 405, 840
TasI AATT 6 cut(s) 165, 543, 631, 722, 826, 836
TauI GCSGC 1 cut(s) 674
TfiI GAWTC 4 cut(s) 184, 309, 358, 430
Tru1I TTAA 5 cut(s) 164, 498, 588, 644, 756
Tru9I TTAA 5 cut(s) 164, 498, 588, 644, 756
TscAI CASTG 2 cut(s) 489, 892
TseI GCWGC 2 cut(s) 176, 623
TspDTI ATGAA 2 cut(s) 260, 920
TspGWI ACGGA 1 cut(s) 233
TspRI CASTG 2 cut(s) 489, 892
Van91I CCANNNNNTGG 1 cut(s) 35
VpaK11BI GGWCC 1 cut(s) 26
VspI ATTAAT 1 cut(s) 498
XapI RAATTY 3 cut(s) 631, 826, 836
XcmI CCANNNNNNNNNTGG 1 cut(s) 486
XspI CTAG 2 cut(s) 767, 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.